prot_H-canaliculatus_F_contig10023.59.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig10023.59.1
Unique Nameprot_H-canaliculatus_F_contig10023.59.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length823
Homology
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BLAST of mRNA_H-canaliculatus_F_contig10023.59.1 vs. uniprot
Match: D8LEF4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEF4_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 1.700e-47
Identity = 157/335 (46.87%), Postives = 191/335 (57.01%), Query Frame = 0 
Query:    1 MSGNVKRLLQLAAGEVQGALEDTRDSLGVAAGASVSVVGTQTGEGL-GPTRESFDALEEELRGVKAAARSLETEKSRLDDRLGAAVVELSEVQGLLRDKTAEALLLEASVGRLEAECREARGAVSAAS-DRLAAAEEVERELXXXXXXXXXXXXXXXXLRGRCAXXXXASGAFAAEVAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAXXXXXXXXXXXXXXGRLEKELMTARAEAQEIDSDVAQVLDALASSEKERRRLEVELERQAKIAGAARLATRAAEGAAAHMQ-----------EDVDRERQALCEKAGRLEGVVQLGASRLKESLE 322
            MSGNVKRLLQLAAGEVQGALEDTRDSLGVA GA+ + VGTQT EGL GPTR   + LE+++  +KA  ++ E EK RL   L AAV EL+++QGLL DK +EA++LEA V RLE E  EAR A SAA+ D LA   E E  L                LR RCA    ASGAFA+EVAK                             F+               RLE+EL+  RAEA++ID+DVAQVLDALASSEKERRRLE EL RQ K   AAR+  +  E  A  ++           E V+RE + L  + G LE  +   A+ LK++ E
Sbjct: 1544 MSGNVKRLLQLAAGEVQGALEDTRDSLGVA-GAAAATVGTQTAEGLDGPTRGEVECLEQQVVRMKAEGQAREAEKLRLSGELSAAVGELTKIQGLLEDKMSEAVVLEAHVARLETERNEAREAASAAANDGLA---EAEASLSDTQARLEAALATQRELRSRCAELSLASGAFASEVAKQKEERARSQERARLATAELRDLSAK----FSRASKTAAADAAAERDRLERELVATRAEARDIDTDVAQVLDALASSEKERRRLEAELHRQTK---AARVQRQQGEREALEVESGRKERETERREKVERECKVLEARTGDLEAAL---AAELKKAAE 1864
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10023.59.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEF4_ECTSI1.700e-4746.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 374..394
NoneNo IPR availableCOILSCoilCoilcoord: 175..195
NoneNo IPR availableCOILSCoilCoilcoord: 484..518
NoneNo IPR availableCOILSCoilCoilcoord: 53..80
NoneNo IPR availableCOILSCoilCoilcoord: 407..434
NoneNo IPR availableCOILSCoilCoilcoord: 133..153
NoneNo IPR availableCOILSCoilCoilcoord: 215..270
NoneNo IPR availableCOILSCoilCoilcoord: 314..348

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10023contigH-canaliculatus_F_contig10023:1514..4427 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10023.59.1mRNA_H-canaliculatus_F_contig10023.59.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig10023 76..5041 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig10023.59.1 ID=prot_H-canaliculatus_F_contig10023.59.1|Name=mRNA_H-canaliculatus_F_contig10023.59.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=823bp
MSGNVKRLLQLAAGEVQGALEDTRDSLGVAAGASVSVVGTQTGEGLGPTR
ESFDALEEELRGVKAAARSLETEKSRLDDRLGAAVVELSEVQGLLRDKTA
EALLLEASVGRLEAECREARGAVSAASDRLAAAEEVERELSDARTRLSAA
LATQGELRGRCAELSLASGAFAAEVAKQKEERTRSQEQARRAAEASAVKL
REKEADFARASETAASEAAAARGRLEKELMTARAEAQEIDSDVAQVLDAL
ASSEKERRRLEVELERQAKIAGAARLATRAAEGAAAHMQEDVDRERQALC
EKAGRLEGVVQLGASRLKESLEEETERRQQLEKECKVLAARATDLEAALI
SASSEVRKAAKLAAERGAQHERDAAALREEATGLRAALAAREAEAESSAA
GARAEVARAVKQERAKWEEEKERLQEVAAREHKAALAAAVAEAAERAHRD
GRADEQSRTVEVREREIRDSAALRRELSEITDALQVERRLRAQAARELSA
LRRKVARLEAALAQASAAALEAGETSRQMISSDPMHYLEAEMRSVISSLE
PEKGRGGEDEAGDAHPRRRGSGKEEGDGRGLGNNDEEEEEEEEANVELGR
ESALGQGRRDRADRLHPESTAARPAEKEEASASTANAGLSGIPVVRDEAR
NVFSLSQGHALRSTTRRRRSDVESPYDEAGPAAPAAGIGADATDAPLTRG
HATLRQAKRVAVLEQAPAVVLVPHPSGFPGDKAISGVPLNSANDDDGNSS
FSSVRSGFSSTTRTSGMSSSLISAPRPQRAPPRRGSVVVRGDWKAGQREA
FSELDRRASATSSGVFGDGGVF*
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