mRNA_H-canaliculatus_F_contig1542.4007.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1542.4007.1 vs. uniprot
Match: D8LNX6_ECTSI (NADH dehydrogenase (Ubiquinone) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX6_ECTSI) HSP 1 Score: 770 bits (1989), Expect = 5.970e-275 Identity = 398/478 (83.26%), Postives = 430/478 (89.96%), Query Frame = 1
Query: 157 HGRRGRGVRGSPLKMAVQTPPKQKKPEFDEGRVADEELLSVLELAGRKAAAAGFLPVLGAKAKEEQDIMWKLKVSPEDVLAFADRAIDTAEDVLMHATRAFKPAEKMNLPLSDGDEKPPLTATKKERVVVLGTGWGGHAISKVIDSDKYEVIYVSPRNYFVFTPMLAAASVGTVDVRSITEPIRMANPCVKYVSGEVVDVNPGEKKVVVALPSPQEKRPPQILESAGAVAPEMPPLMFPEGHPDESATPAE---LKLRAAEETVN------LDEAKPLMELSYDKLVYAVGTKTGTFGVPGVREHCYMLKEANDARLLRAAIVNVLEEACLPGVTDDEKRRLLSFVVIGAGPTGVEFTGELTDLIGNDVPRLFPELIGFINLTVVSSGKVLPMFEEVLQNRGLNLLQSQGIQVLLGNVASEVTTDEVVLKNGKRVPYGLCFWAGGTEPRPLTKRLIETIGPAQTEAEGSKRGQLTVDG 1563
H R RGV LKM+VQTPPK K+PEF EGRVADEELLSV+ELAGRKAAAAGFLPVLGAKAKEEQDIMWKLKVSPEDVLAFADRAIDTAEDV MHATRAFKPA +MNLPL DG++ PPLTATKKER+VVLGTGWGGHAISKVIDSDKYEVIYVSPRNYFVFTPMLAAASVGTVDVRSITEPIRMANPCVKYVSGEV+D+ PG+KKVVVALPSPQEKRPPQ+ SA +VAP +PPL+ + P E AT A RA E +++ LD+AKPLMELSYDKLVYAVGTKTGTFGVPGVRE+CYMLKEANDAR LRAAIVNVLEEACLPGVTD+EKR+LLSFVVIGAGPTGVEFTGELTDLIGNDVPRLFPEL+G INLTVVSSGKVLPMFEEVLQ+RGLNLLQSQGI++LLG+ ASEVT +EVVLKNGKR+PYGLCFWAGGTE RPLT+ LIETIGP QT+A GSKRGQ+TVDG
Sbjct: 2 HSRSRRGVGRGGLKMSVQTPPKPKEPEFGEGRVADEELLSVIELAGRKAAAAGFLPVLGAKAKEEQDIMWKLKVSPEDVLAFADRAIDTAEDVFMHATRAFKPAARMNLPLQDGEDAPPLTATKKERIVVLGTGWGGHAISKVIDSDKYEVIYVSPRNYFVFTPMLAAASVGTVDVRSITEPIRMANPCVKYVSGEVIDIKPGDKKVVVALPSPQEKRPPQMPVSAASVAPNVPPLVHSKS-PAEGATAATGGGALSRAGEGSLSQEPLASLDDAKPLMELSYDKLVYAVGTKTGTFGVPGVRENCYMLKEANDARQLRAAIVNVLEEACLPGVTDEEKRKLLSFVVIGAGPTGVEFTGELTDLIGNDVPRLFPELVGLINLTVVSSGKVLPMFEEVLQDRGLNLLQSQGIEILLGSAASEVTKEEVVLKNGKRIPYGLCFWAGGTEARPLTQSLIETIGPEQTDASGSKRGQITVDG 478
BLAST of mRNA_H-canaliculatus_F_contig1542.4007.1 vs. uniprot
Match: A0A835ZEN6_9STRA (NADH dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEN6_9STRA) HSP 1 Score: 351 bits (901), Expect = 4.340e-111 Identity = 194/403 (48.14%), Postives = 252/403 (62.53%), Query Frame = 1
Query: 358 IMWKLKVSPEDVLAFADRAIDTAEDVLMHATRAFKPAEKMNLPLSDGDEKPPLTATKKERVVVLGTGWGGHAISKVIDSDKYEVIYVSPRNYFVFTPMLAAASVGTVDVRSITEPIRMANPCVKYVSGEVVDVNPGEKKVVVALPSPQEKRPPQILESAGAVAPEMPPLMFPEGHPDESATPAELKLRAAEETVNLDEAKPLMELSYDKLVYAVGTKTGTFGVPGVREHCYMLKEANDARLLRAAIVNVLEEACLPGVTDDEKRRLLSFVVIGAGPTGVEFTGELTDLIGNDVPRLFPELIGFINLTVVSSGK-VLPMFEEVLQNRGLNLLQSQGIQVLLGNVASEVTTDEVVLKNGKRVPYGLCFWAGGTEPRPLTKRLIETIGPAQTEAEGSKRGQLTVDG 1563
+ +KL++ D LAF+ RA+DT EDVL+H RA++P L L + K R+VVLGTGWGGHA+ KVID +KY+V+ VSPRN FVFTPMLAA++VGTV+ SITE I+ ANP V YV G V ++ ++ V S + S+ AV EL Y KLVYAVG+KTGTFG+PGV EH Y+LKE +DAR LR A++ +EA PGV D+ +R+LLSF+VIG+GPTGVEFTGEL+DL+ DVPRLFP+L+ FI+L ++S+GK +LPMF++VLQ +GL L + G V+L E+T +L++G VP+GLCFWAGGTE R LT+ I I P QTE G+ R QLTVDG
Sbjct: 74 LFFKLQLDAADFLAFSGRALDTVEDVLLHLRRAYEPKALGALNLQSLSTR----QGAKPRLVVLGTGWGGHALVKVIDHEKYDVVVVSPRNCFVFTPMLAASAVGTVETSSITESIKAANPQVTYVQGSVRSIDAEAHRITVDTFSSLN-----VGSSSAAVE--------------------------------------KFELDYSKLVYAVGSKTGTFGIPGVMEHSYVLKEVSDARRLRRALLRKFDEASFPGVDDERRRQLLSFLVIGSGPTGVEFTGELSDLLKTDVPRLFPDLVPFISLKIISAGKTILPMFDKVLQEKGLKTLAAGGANVMLNARVKEITRSAAILQDGSEVPFGLCFWAGGTEARKLTRDTIAKI-PGQTEMVGAAREQLTVDG 428
BLAST of mRNA_H-canaliculatus_F_contig1542.4007.1 vs. uniprot
Match: A0A835YW83_9STRA (NADH dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW83_9STRA) HSP 1 Score: 301 bits (772), Expect = 1.980e-91 Identity = 185/470 (39.36%), Postives = 251/470 (53.40%), Query Frame = 1
Query: 340 AKEEQDIMWKLKVSPEDVLAFADRAIDTAEDVLMHATRAFKPAE------KMNLPLSDGDEKPPLTATKKERVVVLGTGWGGHAISKVIDSDKYEVIYVSPRNYFVFTPMLAAASVGTVDVRSITEPIRMANPCVKYVSGEVVDVNPGEKKVVVALPSPQEKRPPQILESAGAVAPEMPPLMFPE------GHPDESATPAELKLRAAEETVNLDEAKPLMELSYDKLVYAVGTKTGTFGVPGVREHCYMLKEANDARLLRAAIVNVLEEACLPGVTDDEKRRLLSFVVIGA----------------------------------------GPTGVEFTGELTDLIGNDVPRLFPELIGFINLTVVSSGK-VLPMFEEVLQNRGLNLLQSQGIQVLLGNVASEVTTDEVVLKNGKRVPYGLCFWAGGTEPRPLTKRLIETIG----------PAQTEAEGSKRGQLTVD 1560
A +++D+ KL++ D +AF+ RA+DT ED L H R+++P K +L +G K R+VVLGTGWGGHA+ KVID +KY+V+ VSPRN FVFTPMLAA++VGTVD SITE I+ ANP V YV G V V+ ++ V S + E + + E L + + YAVG+KTGTFG+ GV E+CY+LKE +DAR LR A++ +EA PGV + +R LLSF+VIG+ GPTG+EFTGEL+DL+ NDVPRLFP+L+ +I+L ++S+ K +LPMF++VLQ +GL L + G V+L V E+ +L +G +VP+GLCFWAGGTE R LT+ I P Q+E EG+ RGQLTVD
Sbjct: 3 AGKDKDLFLKLELDYADFIAFSGRAVDTVEDALTHLRRSWEPKALGALNIKRDLSTQEG---------AKPRLVVLGTGWGGHALVKVIDHEKYDVVVVSPRNCFVFTPMLAASAVGTVDTSSITESIKEANPQVTYVQGTVRSVDADAHRITVDTFS-------SLNEGGSSASVEKVELEYSKLVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAVGSKTGTFGIRGVLENCYVLKEVSDARRLRRALLRTFDEASFPGVDEARRRALLSFLVIGSAXXXXXXXXSALLRKXXXXXXXXXXXXXXXXXXXXXXXXXGPTGIEFTGELSDLLRNDVPRLFPDLLPYISLKILSADKTILPMFDKVLQEKGLKTLAAAGANVMLDTVVKEIKPGAAILSDGSQVPFGLCFWAGGTEARKLTRDTIAKXXXXXXXXXXKIPGQSEMEGAARGQLTVD 456
BLAST of mRNA_H-canaliculatus_F_contig1542.4007.1 vs. uniprot
Match: A0A4D9D668_9STRA (Pyr_redox_2 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D668_9STRA) HSP 1 Score: 297 bits (761), Expect = 1.610e-90 Identity = 163/414 (39.37%), Postives = 236/414 (57.00%), Query Frame = 1
Query: 322 PVLGAKAKEEQDIMWKLKVSPEDVLAFADRAIDTAEDVLMHATRAFKPAEKMNLPLSDGDEKPPLTATKKERVVVLGTGWGGHAISKVIDSDKYEVIYVSPRNYFVFTPMLAAASVGTVDVRSITEPIRMANPCVKYVSGEVVDVNPGEKKVVVALPSPQEKRPPQILESAGAVAPEMPPLMFPEGHPDESATPAELKLRAAEETVNLDEAKPLMELSYDKLVYAVGTKTGTFGVPGVREHCYMLKEANDARLLRAAIVNVLEEACLPGVTDDEKRRLLSFVVIGAGPTGVEFTGELTDLIGNDVPRLFPELIGFINLTVVSSG-KVLPMFEEVLQNRGLNLLQSQGIQVLLGNVASEVTTDEVVLKNGKRVPYGLCFWAGGTEPRPLTKRLIETIGPAQTEAEGSKRGQLTVD 1560
P+ A A E+ W L S D+ DR +DT ED+ +H RA + ++ ++ A K+RV++LGTGWGGHA++KV+D+ YEV+ VSPRN+F+FTPMLA +SVGTVD RSI EPIR ANP Y + + + P + V + P E + E +AP YD LVY G ++GTFG PGVREH + LKE +DA LR A+V+ E A +P V+ +EK+R+LSFVV+G GPTGVEF+GE +D + D+ + +P L+ ++ ++ +G ++LP+F+ LQ +GL +L++QGI+V+L +V + L G+ +PYGLC WA GT PR +TK LI I P Q+ + +RG+L+VD
Sbjct: 63 PLQAAPAPSEEPPFWSLVFS--DLFLLFDRTLDTVEDIGVHLRRATE----RDMDRRFRRDRLTTKAGTKKRVMILGTGWGGHAVTKVVDTGLYEVVIVSPRNFFLFTPMLAGSSVGTVDYRSIIEPIRAANPLADYYEAQALAIYPNNQTVRIRSEIPNE-----VGEYEDFLAP------------------------------------------YDILVYGCGAQSGTFGTPGVREHAFFLKEISDAVKLRQALVDRFERANMPSVSMEEKKRILSFVVVGGGPTGVEFSGEFSDFLNRDLAKYYPALVDLVSFKIIQAGSRILPVFDAALQEQGLEVLKAQGIEVMLNRKVLKVEEKHIELDGGEILPYGLCVWAAGTAPRDITKSLIAAI-PEQSASTAGQRGRLSVD 422
BLAST of mRNA_H-canaliculatus_F_contig1542.4007.1 vs. uniprot
Match: A0A0G4FSU6_VITBC (Pyr_redox_2 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FSU6_VITBC) HSP 1 Score: 287 bits (734), Expect = 1.060e-85 Identity = 160/383 (41.78%), Postives = 218/383 (56.92%), Query Frame = 1
Query: 415 IDTAEDVLMHATRAFKPAEKMNLPLSDGDEKPPLTATKKERVVVLGTGWGGHAISKVIDSDKYEVIYVSPRNYFVFTPMLAAASVGTVDVRSITEPIRMANPCVKYVSGEVVDVNPGEKKVVVALPSPQEKRPPQILESAGAVAPEMPPLMFPEGHPDESATPAELKLRAAEETVNLDEAKPLMELSYDKLVYAVGTKTGTFGVPGVREHCYMLKEANDARLLRAAIVNVLEEACLPGVTDDEKRRLLSFVVIGAGPTGVEFTGELTDLIGNDVPRLFPELIGFINLTVVSSG-KVLPMFEEVLQNRGLNLLQSQGIQVLLGNVASEVTTDEVVLKNGKRVPYGLCFWAGGTEPRPLTKRLIETIGPAQTEAEGSKRGQLTVD 1560
+DT EDV +H R F K+NL D T K R+V+LG+GW HA+ K+ID+DK++V+ VSPRNYF+FTPMLAA++VGTV+ RSITEP+R ANP Y GE +D++P +K++ V + EG E A P YD L+++ G K+ +FG+ GV EHCY LKE DAR LR A+ + E A +P +D+EK+RLL+F V G GPTGVEF GEL DL+ ++ + +P+L + +V SG +LP+F+E L++ GL L+ QG+QV L EV ++L NG +PYGL WA GT PR +TKRLIE + Q A SK+ L VD
Sbjct: 169 LDTVEDVSLHWRRQFMKLNKVNLMQKRLD-------TDKPRLVILGSGWAAHAMIKIIDTDKFDVVIVSPRNYFLFTPMLAASAVGTVEYRSITEPMRKANPLTSYYEGEAIDIDPEKKEIRVRSK-----------------------IQTTEGETVEFAVP------------------------YDTLIFSPGVKSSSFGIKGVYEHCYFLKEIEDARKLRTAVQDRFERANIPDTSDEEKQRLLTFAVCGGGPTGVEFCGELFDLLRSEFRKFYPKLTPMAKVVLVQSGPNILPIFDESLRSVGLQKLRDQGVQVALETRVQEVGPKSILLSNGTELPYGLAVWAAGTGPREITKRLIEKVPTQQEMASQSKK--LAVD 495
BLAST of mRNA_H-canaliculatus_F_contig1542.4007.1 vs. uniprot
Match: A0A0G4IC18_9ALVE (Pyr_redox_2 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4IC18_9ALVE) HSP 1 Score: 271 bits (694), Expect = 6.390e-81 Identity = 151/378 (39.95%), Postives = 215/378 (56.88%), Query Frame = 1
Query: 409 RAIDTAEDVLMHATRAFKPAEKMNLPLSDGDEKPPLTATKKERVVVLGTGWGGHAISKVIDSDKYEVIYVSPRNYFVFTPMLAAASVGTVDVRSITEPIRMANPCVKYVSGEVVDVNPGEKKVVVALPSPQEKRPPQILESAGAVAPEMPPLMFPEGHPDESATPAELKLRAAEETVNLDEAKPLMELSYDKLVYAVGTKTGTFGVPGVREHCYMLKEANDARLLRAAIVNVLEEACLPGVTDDEKRRLLSFVVIGAGPTGVEFTGELTDLIGNDVPRLFPELIGFINLTVVSSG-KVLPMFEEVLQNRGLNLLQSQGIQVLLGNVASEVTTDEVVLKNGKRVPYGLCFWAGGTEPRPLTKRLIETIGPAQTEAEGSK 1539
+ +D ED MH R F+ K D EK + R+VV+G+GW HA KVID+ KY+V+ VSPRNYFVFTPML A+SVGTV+ RSITEPIR ANP V Y GEVV+V P ++K+ + Q +E G G + P YD LV+A G K GTFG PGV ++C+ +KE +DAR +R A+ ++ E A +P V+++E++RLL FVV+GAGPTGVEFTGE DL+ N++ + +P L+ + + ++ SG ++LP+F E LQN L G++V + EV ++ L +G+ +PYG+C W+ GTE R +TK +I+ +G A +K
Sbjct: 39 QTLDVVEDAFMHYNRIFQTFRKGR----DLREK----SKDVPRIVVVGSGWAAHAFIKVIDALKYDVVVVSPRNYFVFTPMLTASSVGTVEYRSITEPIRKANPLVDYYEGEVVEVAPDQQKLCIKPTMGGG----QYVEKFGG------------GKATKFCVP------------------------YDYLVFAPGVKAGTFGTPGVEKYCFFMKEIDDARRVRKAVSDIFERASMPDVSEEERKRLLKFVVVGAGPTGVEFTGEFNDLLVNEMKKYYPRLVDEVQVELLQSGNRILPVFHEELQNAAEETLIKAGVKVRKNSRVKEVMDGKIKLTSGEELPYGMCVWSAGTEAREITKMMIDKLGGKHKTAGKNK 368
BLAST of mRNA_H-canaliculatus_F_contig1542.4007.1 vs. uniprot
Match: A0A0G4EDA2_VITBC (Pyr_redox_2 domain-containing protein n=2 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EDA2_VITBC) HSP 1 Score: 261 bits (667), Expect = 1.730e-76 Identity = 152/398 (38.19%), Postives = 221/398 (55.53%), Query Frame = 1
Query: 385 EDVLAFADRA----IDTAEDVLMHATRAFKPAEKMNLPLSDGDEKPPLTATKKERVVVLGTGWGGHAISKVIDSDKYEVIYVSPRNYFVFTPMLAAASVGTVDVRSITEPIRMANPCVKYVSGEVVDVNPGEKKVVVALPSPQEKRPPQILESAGAVAPEMPPLMFPEGHPDESATPAELKLRAAEETVNLDEAKPLMELSYDKLVYAVGTKTGTFGVPGVREHCYMLKEANDARLLRAAIVNVLEEACLPGVTDDEKRRLLSFVVIGAGPTGVEFTGELTDLIGNDVPRLFPELIGFINLTVVSSGK-VLPMFEEVLQNRGLNLLQSQGIQVLLGNVASEVTTDEVVLKNGKRVPYGLCFWAGGTEPRPLTKRLIETIGPAQTEAEGSKRGQ-LTVD 1560
+ V+A D +DT ED + +R + +++ GDE+ P +K R+VV+G+GW HA K ID+ K++V+ +SPRNYF+FTP+LAAASVGTV+ RSITEP+R ANP Y GE D+ P + V ++R +T D +K + + YD LV++ G + +FGV GV E+CY LKE +DAR LR+A+ + E A +P VT++ KRR+L+FVV G GPTGVEF GEL DL+ + L+P+L + ++ SG +LP+FEE L+ GLN++ + G++V L V + L NG +PYGL W GT PR +T+RLIE + +AE + R + LT+D
Sbjct: 94 QSVMALVDEVGTSLLDTVEDASLFWSRQLRSEDEL------GDEQGP----RKHRIVVIGSGWSSHAFIKSIDTHKFDVVIISPRNYFLFTPLLAAASVGTVEYRSITEPMRKANPYASYFEGEATDIFPENRTV---------------------------------------------RMRTRMQTN--DGSKIDLNVPYDTLVFSPGVMSSSFGVKGVYENCYFLKEVDDARRLRSAVQDRFERANIPEVTEEAKRRILTFVVCGGGPTGVEFCGELYDLLSTEFKTLYPKLKSLARVVMIQSGPTILPVFEESLRAVGLNVITTAGVEVALETRVKAVGPYSMTLHNGTELPYGLAVWTAGTGPRKITERLIEKVA---VQAEMTSRARKLTID 431
BLAST of mRNA_H-canaliculatus_F_contig1542.4007.1 vs. uniprot
Match: A0A7S1DMZ9_HEMAN (Hypothetical protein n=3 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DMZ9_HEMAN) HSP 1 Score: 258 bits (659), Expect = 5.370e-75 Identity = 151/357 (42.30%), Postives = 203/357 (56.86%), Query Frame = 1
Query: 526 KKERVVVLGTGWGGHAISKVIDSDKYEVIYVSPRNYFVFTPMLAAASVGTVDVRSITEPIRMANPCVKYVSGEVVDVNPGEKKVVVALPSPQEKRPPQILESAGAVAPEMPPLMFPEGHPDESATPAELKLRAAEETVNLDEAKPLMELSYDKLVYAVGTKTGTFGVPGVREHCYMLKEANDARLLRAAIVNVLEEACLPGVTDDEKRRLLSFVVIGAGPTGVEFTGELTDLIGNDVPRLFPELIGFINLTVV-SSGKVLPMFEEVLQNRGLNLL-----------QSQGIQVLLGNVASEVTTDEVVLKNGKRVPYGLCFWAGGTEPRPLTKRLIETIGPAQTEAEGSKRGQLTVD 1560
KKE+VV+LGTGWG HA+ K ID+ Y+V +SPRNYFVFTPMLA A+ GTV++RSITE IR AN V Y+ ++V P +K+V Q + GA + +++E + YD+LV VG TFG+ GVRE CY LK+A DA +LR AI N E A P ++D+E++R LSFVV+GAGPTGVEFTGEL D I +DV R +P+L+ FI++ ++ +S KVL MFE LQ R + L + +QVLL + ++V DE+ L +G +PYG+ WAGG P PL L+ + Q E RG+LTVD
Sbjct: 183 KKEKVVILGTGWGAHALVKAIDASAYDVTVISPRNYFVFTPMLAGAATGTVELRSITESIRDANKNVDYLEATALEVLPEKKEVRC-----------QSVVCEGA-------------------------------SCSIEE----FDQGYDRLVITVGASVNTFGIEGVRERCYFLKQAPDAAVLREAIGNCFERANYPSMSDEERKRTLSFVVVGAGPTGVEFTGELRDFIESDVARFYPDLLPFISVKLLEASDKVLMMFESTLQARAIQDLTTPRPTKPEGLRDDYVQVLLSSAVNKVGEDEMTLNDGTVIPYGIGVWAGGIGPMPLVLDLVSRVDEQQKIPEA--RGRLTVD 491
BLAST of mRNA_H-canaliculatus_F_contig1542.4007.1 vs. uniprot
Match: A0A7S0ZDK2_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZDK2_9RHOD) HSP 1 Score: 254 bits (648), Expect = 6.560e-74 Identity = 138/378 (36.51%), Postives = 207/378 (54.76%), Query Frame = 1
Query: 403 ADRAIDTAEDVLMHATRAFKPAEKMNLPLSDGDEKPPLTATKKERVVVLGTGWGGHAISKVIDSDKYEVIYVSPRNYFVFTPMLAAASVGTVDVRSITEPIRMANPCVKYVSGEVVDVNPGEKKVVVALPSPQEKRPPQILESAGAVAPEMPPLMFPEGHPDESATPAELKLRAAEETVNLDEAKPLMELSYDKLVYAVGTKTGTFGVPGVREHCYMLKEANDARLLRAAIVNVLEEACLPGVTDDEKRRLLSFVVIGAGPTGVEFTGELTDLIGNDVPRLFPELIGFINLTVVSSG-KVLPMFEEVLQNRGLNLLQSQGIQVLLGNVASEVTTDEVVLKNGKRVPYGLCFWAGGTEPRPLTKRLIETIGPAQTEAEG 1533
A R +DT EDV +H TR + P + + TATK RVVVLG GW GHA K ID++KY+V+ +SPRNYF+FTPMLA+++VGTV+ RSI E IR +N + Y+ E D++ + + P+ + ++ Y L+ +VG TFG PGV+E+C+ LK+ +DAR LR +I+N EEA +PG++++E+ RLL+FV++G GPTG EF+ EL+D + DV + +P+L +++ +++SG +L F+ LQ L+ L+ I V+L + VT + LKNG +PYGL WA G +PL +R+IE P Q +A+G
Sbjct: 102 ATRTVDTFEDVRLHLTRKYFPDQSLK------------TATKP-RVVVLGVGWAGHAFVKTIDTEKYDVVVISPRNYFLFTPMLASSAVGTVEFRSICESIRASNEYIDYIEAECDDIDTEHRTIRCKTPNGN-----------------------------------------------------VFDMDYSYLIVSVGASINTFGTPGVKEYCHFLKDVDDARTLRRSILNKFEEANIPGLSEEERARLLTFVIVGGGPTGCEFSAELSDFLRQDVKKHYPKLFSEVSVKLLNSGASILGQFDSALQESALSSLKKGKIDVVLNARVTNVTDKTITLKNGDEIPYGLAVWAAGNGVQPLVERIIERT-PEQADAKG 412
BLAST of mRNA_H-canaliculatus_F_contig1542.4007.1 vs. uniprot
Match: D8U3G5_VOLCA (NADH:ubiquinone reductase (non-electrogenic) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U3G5_VOLCA) HSP 1 Score: 255 bits (651), Expect = 1.110e-73 Identity = 149/413 (36.08%), Postives = 226/413 (54.72%), Query Frame = 1
Query: 334 AKAKEEQDIMWKLKVSPE--DVLAFA----DRAIDTAEDVLMHATR----AFKPAEKMNLPLSDGDEKPPLTATKKERVVVLGTGWGGHAISKVIDSDKYEVIYVSPRNYFVFTPMLAAASVGTVDVRSITEPIRMANPCVKYVSGEVVDVNPGEKKVVVALPSPQEKRPPQILESAGAVAPEMPPLMFPEGHPDESATPAELKLRAAEETVNLDEAKPLMELSYDKLVYAVGTKTGTFGVPGVREHCYMLKEANDARLLRAAIVNVLEEACLPGVTDDEKRRLLSFVVIGAGPTGVEFTGELTDLIGNDVPRLFPELIGFINLTVVSSGK-VLPMFEEVLQNRGLNLLQSQGIQVLLGNVASEVTTDEVVLKNGKRVPYGLCFWAGGTEPRPLTKRLIETIGPAQTEAEGSK 1539
A A Q++++ L P+ AFA D +D+ D+ H R + PA++ L + G+ + L ++ K V+VLG+GWG H++ KVID+D Y+V+ VSPRN+FVFTPML + +VGTV+ RS+ EPIR +NPCV Y+ + ++P E KV V S + +G +P E+ YDK V AVG + TFGVPGV+EHC+ +KE +DA LR+ I E A LPG ++ ++R L+FVV+G GPTGVEF G L+D + D+ + +P L+ ++ +T++ S + +L F+E L R L L S G++V G +VT ++VVLK+G+ + G+C W+ G PRPL ++ + AE S+
Sbjct: 20 AAASSPQELLFPLPGDPQWPPQRAFAAVALDNLLDSVVDIGRHLRRMNVESDLPAQQEQL-VPGGNGRMRLRSSTKPVVLVLGSGWGAHSLIKVIDTDMYDVVVVSPRNHFVFTPMLPSTAVGTVEFRSLLEPIRTSNPCVTYLEAQCETLDP-EAKVAVCTSS----------------------FAYDDGR------------------------RPQFEIQYDKAVVAVGEQPATFGVPGVKEHCFFMKEISDAVALRSRIAEKFELASLPGTSEADRRAALNFVVVGGGPTGVEFAGTLSDFLREDLRKKYPALMPYVRVTLLQSAQSILTQFDEGLGQRALEALTSSGVEVRTGVRVVQVTANKVVLKDGEEIFCGVCVWSAGNAPRPLVTQIASEVPQQAMAAEASR 384 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1542.4007.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1542.4007.1 >prot_H-canaliculatus_F_contig1542.4007.1 ID=prot_H-canaliculatus_F_contig1542.4007.1|Name=mRNA_H-canaliculatus_F_contig1542.4007.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=522bp MPLTSSSSYSQIAAAAAVTLCIIAQEVQAFIPAISISRARPSATPFHVSAback to top mRNA from alignment at H-canaliculatus_F_contig1542:178..7001- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1542.4007.1 ID=mRNA_H-canaliculatus_F_contig1542.4007.1|Name=mRNA_H-canaliculatus_F_contig1542.4007.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6824bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1542:178..7001- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1542:178..7001- >mRNA_H-canaliculatus_F_contig1542.4007.1 ID=mRNA_H-canaliculatus_F_contig1542.4007.1|Name=mRNA_H-canaliculatus_F_contig1542.4007.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3132bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1542:178..7001- (Hapterophycus canaliculatus Oshoro5f female)back to top |