mRNA_H-canaliculatus_F_contig15403.4000.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig15403.4000.1 vs. uniprot
Match: D7FRP1_ECTSI (PAP2_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRP1_ECTSI) HSP 1 Score: 380 bits (976), Expect = 2.740e-130 Identity = 183/193 (94.82%), Postives = 188/193 (97.41%), Query Frame = 1
Query: 1 TVTVNFATYVHTPGEPLFDIGFLVIPEQTVDSPWRPVSDTLTALLPGIALLRGLFMDRKQRIVLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKSLYNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLVFVKSWRGHATYRVWKVLGVTYLLTMCTLAIAGRKHYTVDITLGILIASLTF 579
TVTVNFATYVHTP EPLFDIGFLVIPEQT+DSPWRPVSDTLTALLPGIALLR LFMDRKQR+ LVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDK+LYNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTML+FVKSWRGHATYRVWK LGV YLLTMCTLAIAGRKHYTVDITLGIL+ASLTF
Sbjct: 166 TVTVNFATYVHTPAEPLFDIGFLVIPEQTLDSPWRPVSDTLTALLPGIALLRSLFMDRKQRVTLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKALYNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLIFVKSWRGHATYRVWKALGVVYLLTMCTLAIAGRKHYTVDITLGILVASLTF 358
BLAST of mRNA_H-canaliculatus_F_contig15403.4000.1 vs. uniprot
Match: A0A6H5J947_9PHAE (PAP2_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J947_9PHAE) HSP 1 Score: 239 bits (611), Expect = 7.970e-71 Identity = 112/195 (57.44%), Postives = 141/195 (72.31%), Query Frame = 1
Query: 1 TVTVNFATYVHTPGEPLFDIGFLVIPEQTVDSPWRPVSDTLTALLPGIALLRGLFMDRKQRIVLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKSLYNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLVFVKSWRG--HATYRVWKVLGVTYLLTMCTLAIAGRKHYTVDITLGILIASLTF 579
T+ NF+T VH P PLFD+GF ++P Q VDSPWRP+SD LT LPG+A LR LF DR+ R + WFRL+S+ Y++RCL + LTSLPGPAPHC S Y+PP WH++ATR+G ++GDF +CGDLLFSGH A+TT++ML+ KS+R Y K G YLLTM T IAGRKHYTVD+ L ++IA LTF
Sbjct: 335 TICANFSTMVHQPRLPLFDVGFYLVPAQGVDSPWRPLSDILTLALPGLAFLRTLFFDRRTRCRFIADWFRLMSVTYLMRCLCVTLTSLPGPAPHCEALSEYDPPRGWHDVATRLGPLMGDFRTCGDLLFSGHTAWTTVSMLLLTKSFRRAPRLVYAFVKAAGFLYLLTMATCTIAGRKHYTVDVALAVVIAGLTF 529
BLAST of mRNA_H-canaliculatus_F_contig15403.4000.1 vs. uniprot
Match: D8LG44_ECTSI (PAP2_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG44_ECTSI) HSP 1 Score: 202 bits (515), Expect = 4.340e-63 Identity = 96/168 (57.14%), Postives = 121/168 (72.02%), Query Frame = 1
Query: 82 QTVDSPWRPVSDTLTALLPGIALLRGLFMDRKQRIVLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKSLYNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLVFVKSWRG--HATYRVWKVLGVTYLLTMCTLAIAGRKHYTVDITLGILIASLTF 579
Q VDSPWRP+SD LT LPG+A R LF DR+ R + WFRL+S+ Y++RCL + LTSLPGPAPHC S Y+ P WH++ATR+G ++GDF +CGDLLFSGH A+TT++ML+ KS+R Y + K G YLLTM T IAGRKHYTVD+ L ++IA LTF
Sbjct: 30 QGVDSPWRPLSDILTLALPGLAFFRTLFFDRRTRCRFIADWFRLMSVTYLMRCLCVTLTSLPGPAPHCEALSGYDRPRGWHDVATRLGPLMGDFRTCGDLLFSGHTAWTTVSMLLLTKSFRRAPRLVYALVKSTGFLYLLTMATCTIAGRKHYTVDVALAVVIAGLTF 197
BLAST of mRNA_H-canaliculatus_F_contig15403.4000.1 vs. uniprot
Match: K3X811_GLOUD (PAP2_C domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X811_GLOUD) HSP 1 Score: 201 bits (512), Expect = 1.240e-59 Identity = 96/195 (49.23%), Postives = 142/195 (72.82%), Query Frame = 1
Query: 7 TVNFATYVHTPGE-PLFDIGFLVIPEQTVDSPWRPVSDTLTALLPGIALLRGLFMDRKQRIVLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKS-LYNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLVFVKSWRGHATY--RVWKVLGVTYLLTMCTLAIAGRKHYTVDITLGILIASLTF 579
+ N A Y+H P + PL D+GF+++P Q VDSPWRPVSD LTA++P +A+++ FM R R +++++FR+ ++ Y LR LT+ LTSLPGPAPHCR S LY PP +W +I TR+G M G+F+SCGDL+FSGH A+T +L+++++ H ++ LG +LLT+ TL ++GRKHY+VD+ LGI+I++L F
Sbjct: 178 STNIAFYLHAPSDTPLRDLGFMLVPAQAVDSPWRPVSDVLTAVMPVVAMVQTYFMTRANRCRVISTFFRVATVSYALRMLTVSLTSLPGPAPHCRPGSGLYFPPQTWIDIVTRVGPMYGNFNSCGDLIFSGHMAYTNSALLLYLRTMDQHFVRFSKLRWTLGAVFLLTLATLCVSGRKHYSVDVMLGIMISTLVF 372
BLAST of mRNA_H-canaliculatus_F_contig15403.4000.1 vs. uniprot
Match: A0A662Y930_9STRA (PAP2_C domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y930_9STRA) HSP 1 Score: 199 bits (507), Expect = 3.820e-59 Identity = 98/197 (49.75%), Postives = 141/197 (71.57%), Query Frame = 1
Query: 7 TVNFATYVHTPGE-PLFDIGFLVIPEQTVDSPWRPVSDTLTALLPGIALLRGLFMDRKQRIVLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKSL-YNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLVFVKS----WRGHATYRVWKVLGVTYLLTMCTLAIAGRKHYTVDITLGILIASLTF 579
+VN A Y+H P PL D+GF++IPEQ +DS WRPVSD LTA +P I +L+ LFM R R +++S+FRL ++ Y LR LT+ +TSLPGPAPHCR S Y PP +W +I TR+G + G+++SCGDL+FSGH A+T +L+++++ + GH ++ G++YL+ + L IAGRKHYTVD+ LG++IA+L F
Sbjct: 152 SVNIAFYLHVPTTTPLKDLGFMLIPEQAIDSKWRPVSDLLTAGVPVIFMLQTLFMTRANRCRIISSFFRLATVCYFLRMLTVSVTSLPGPAPHCRAGSPDYYPPTTWIDIVTRVGPIYGNYNSCGDLIFSGHMAYTNSAVLLYLRTLDRNFPGHTASKIRWACGMSYLVVLSVLCIAGRKHYTVDVVLGLMIATLVF 348
BLAST of mRNA_H-canaliculatus_F_contig15403.4000.1 vs. uniprot
Match: A0A5D6XG27_9STRA (PAP2_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XG27_9STRA) HSP 1 Score: 196 bits (498), Expect = 8.810e-58 Identity = 101/195 (51.79%), Postives = 136/195 (69.74%), Query Frame = 1
Query: 10 VNFATYVHTPGE-PLFDIGFLVIPEQTVDSPWRPVSDTLTALLPGIALLRGLFMDRKQRIVLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCR-DKSLYNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLVFVKSWRGHA---TYRVWKVLGVTYLLTMCTLAIAGRKHYTVDITLGILIASLTF 579
VN A Y+H P PL D+GFL IPEQ VDS WRP+SD LTA +P + LL+ L M R+ R+ +++++FR ++ Y LR LTI LTSLPGPAPHCR + Y PP +W +I TR+G M G+++SCGDL+FSGH A+T +L++++ HA + W LG YLL + L IAGRKHYTVD+ LG+LI++L F
Sbjct: 129 VNVAFYLHVPSSTPLPDLGFLFIPEQAVDSKWRPLSDVLTAGVPVVFLLQSLAMTRENRVTVISTFFRCATVCYFLRGLTIALTSLPGPAPHCRVGSATYFPPQNWIDIVTRVGPMYGNYNSCGDLIFSGHMAYTNSAVLLYLRVLDRHAPRFSALRW-ALGAAYLLLLAALCIAGRKHYTVDVVLGLLISALVF 322
BLAST of mRNA_H-canaliculatus_F_contig15403.4000.1 vs. uniprot
Match: A0A5D6Y3E4_9STRA (PAP2_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3E4_9STRA) HSP 1 Score: 195 bits (496), Expect = 1.840e-57 Identity = 96/195 (49.23%), Postives = 139/195 (71.28%), Query Frame = 1
Query: 7 TVNFATYVHTPGE-PLFDIGFLVIPEQTVDSPWRPVSDTLTALLPGIALLRGLFMDRKQRIVLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKS-LYNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLVFVKSW-RGHATY-RVWKVLGVTYLLTMCTLAIAGRKHYTVDITLGILIASLTF 579
+ N A Y+H P PL D+GF+++PEQ +DS WRP+SD LTA++P + LL+ LFM R R ++ ++FR+ S+ Y LR LT+ LTSLPGPAPHCR S LY PP +W +I TR+G M G F+SCGDL+FSGH A+T +L+++++ R A + R+ + G +LL + L +AGRKHYTVD+ LG++++SL +
Sbjct: 141 STNIAFYLHAPAAAPLRDLGFMLVPEQALDSKWRPLSDVLTAVVPVLGLLQTLFMTRANRCRVIATFFRVASVSYALRLLTVSLTSLPGPAPHCRPGSALYAPPQTWIDIVTRVGPMYGQFNSCGDLIFSGHMAYTNSALLLYLRTMDRYFARFSRLRWLAGTAFLLALALLCVAGRKHYTVDVVLGVVVSSLVY 335
BLAST of mRNA_H-canaliculatus_F_contig15403.4000.1 vs. uniprot
Match: A0A0P1APX3_PLAHL (Transmembrane protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APX3_PLAHL) HSP 1 Score: 192 bits (489), Expect = 4.750e-57 Identity = 97/197 (49.24%), Postives = 139/197 (70.56%), Query Frame = 1
Query: 7 TVNFATYVHTPGE-PLFDIGFLVIPEQTVDSPWRPVSDTLTALLPGIALLRGLFMDRKQRIVLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKSL-YNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLVFVKS----WRGHATYRVWKVLGVTYLLTMCTLAIAGRKHYTVDITLGILIASLTF 579
+VN + Y+H P PL D+GF++IPEQ + S WRPVSD LTA +P I LL+ M R R +V+S+FR+V+I Y LR LT+ +TSLPGPAPHCR S Y PP SW +IATR+G + G+++SCGDL+FSGH A+T +L+++++ + G ++ G+TYL+ + L IAGRKHYTVD+ LG+++++L F
Sbjct: 98 SVNISFYLHVPATTPLKDLGFMIIPEQKLHSKWRPVSDILTAGMPVIFLLQTAVMTRPNRCRVVSSFFRIVTICYFLRMLTVSVTSLPGPAPHCRVGSHDYFPPTSWIDIATRVGPIYGNYNSCGDLIFSGHMAYTVSAVLLYLRTLDRNFPGRMASKIRWACGLTYLIILAVLCIAGRKHYTVDVVLGLIVSTLVF 294
BLAST of mRNA_H-canaliculatus_F_contig15403.4000.1 vs. uniprot
Match: A0A484EEP4_BRELC (PAP2_C domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EEP4_BRELC) HSP 1 Score: 192 bits (489), Expect = 1.560e-56 Identity = 95/197 (48.22%), Postives = 140/197 (71.07%), Query Frame = 1
Query: 7 TVNFATYVHTPGE-PLFDIGFLVIPEQTVDSPWRPVSDTLTALLPGIALLRGLFMDRKQRIVLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKSL-YNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLVFVKS----WRGHATYRVWKVLGVTYLLTMCTLAIAGRKHYTVDITLGILIASLTF 579
+VN + ++H P PL D+GF++IPEQT+ S WRPVSD LTA LP I LL+ + M R R +V+S+FR+ +I Y LR LT+ +TSLPGPAPHCR +L Y PP +W +I TR+G + G+++SCGDL+FSGH A+T +L+++++ + G + ++ GV YL+ + L IAGRKHYTVD+ LG++I+++ F
Sbjct: 146 SVNISFFLHVPAATPLKDLGFMLIPEQTLHSKWRPVSDILTAGLPVIFLLQTIVMSRPSRCRIVSSFFRIATICYFLRMLTVSVTSLPGPAPHCRAGNLDYFPPATWIDIVTRVGPIYGNYNSCGDLIFSGHMAYTNSAVLLYLRTLDRNFSGSMSSKIRWACGVAYLIILAVLCIAGRKHYTVDVVLGVIISTMVF 342
BLAST of mRNA_H-canaliculatus_F_contig15403.4000.1 vs. uniprot
Match: A0A6A3DVY3_9STRA (PAP2_C domain-containing protein n=15 Tax=Phytophthora TaxID=4783 RepID=A0A6A3DVY3_9STRA) HSP 1 Score: 191 bits (484), Expect = 9.780e-56 Identity = 95/197 (48.22%), Postives = 139/197 (70.56%), Query Frame = 1
Query: 7 TVNFATYVHTPGE-PLFDIGFLVIPEQTVDSPWRPVSDTLTALLPGIALLRGLFMDRKQRIVLVTSWFRLVSIVYMLRCLTIGLTSLPGPAPHCRDKSL-YNPPVSWHEIATRMGVMVGDFSSCGDLLFSGHAAFTTLTMLVFVKS----WRGHATYRVWKVLGVTYLLTMCTLAIAGRKHYTVDITLGILIASLTF 579
+VN A Y+H P PL D+GF++IPEQ + S WRPVSD LTA +P + LL+ +FM R R +V+S+FR+ +I Y LR LT+ +TSLPGPAPHCR S Y PP +W +I TR+G + G+++SCGDL+FSGH A+T +L+++++ + G ++ G+T+L+ + L IAGRKHYTVD+ LG++I++L F
Sbjct: 151 SVNVAFYLHVPATTPLKDLGFMLIPEQGLHSKWRPVSDILTAGVPVVFLLQTIFMTRPNRCRIVSSFFRIATICYFLRMLTVSVTSLPGPAPHCRAGSPDYFPPQTWIDIVTRVGPIYGNYNSCGDLIFSGHMAYTNSAVLLYLRTLDRNFAGRTASKIRWACGMTHLMVLAALCIAGRKHYTVDVVLGLIISTLVF 347 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15403.4000.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig15403.4000.1 >prot_H-canaliculatus_F_contig15403.4000.1 ID=prot_H-canaliculatus_F_contig15403.4000.1|Name=mRNA_H-canaliculatus_F_contig15403.4000.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=193bp TVTVNFATYVHTPGEPLFDIGFLVIPEQTVDSPWRPVSDTLTALLPGIALback to top mRNA from alignment at H-canaliculatus_F_contig15403:3..2032- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig15403.4000.1 ID=mRNA_H-canaliculatus_F_contig15403.4000.1|Name=mRNA_H-canaliculatus_F_contig15403.4000.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2030bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15403:3..2032- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig15403:3..2032- >mRNA_H-canaliculatus_F_contig15403.4000.1 ID=mRNA_H-canaliculatus_F_contig15403.4000.1|Name=mRNA_H-canaliculatus_F_contig15403.4000.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1158bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15403:3..2032- (Hapterophycus canaliculatus Oshoro5f female)back to top |