mRNA_H-canaliculatus_F_contig15396.3988.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig15396.3988.1
Unique NamemRNA_H-canaliculatus_F_contig15396.3988.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig15396.3988.1 vs. uniprot
Match: A0A6H5L0M8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0M8_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 5.500e-61
Identity = 123/143 (86.01%), Postives = 123/143 (86.01%), Query Frame = 1 
Query:    1 RHETKTGAPSNYVAGLGRGAVGFTTRSDIGPARTPLAEPGAAGPXXXXXXSSGAAKDPDFGPAPVGYVAGRGRGMGDLAKSNSEGGAGRXXXXXXXXXXXXXXXXGAVDLSESNYDEFSGYQERLFGDTPYDNDDEEADRIYE 429
            R     GAPSNYVAGLGRGAVGFTTRSDIGPARTPLAEPGAAGP      SSGAAKDPDFGPAPVGYVAGRGRGMGDLAKSN       XXXXXXXXXXXXXXX GAVDLSESNYDEFSGY ERLFGDTPYDNDDEEADRIYE
Sbjct:   11 RSTYNAGAPSNYVAGLGRGAVGFTTRSDIGPARTPLAEPGAAGPPGAPGASSGAAKDPDFGPAPVGYVAGRGRGMGDLAKSNXX--XXXXXXXXXXXXXXXXXXAGAVDLSESNYDEFSGYSERLFGDTPYDNDDEEADRIYE 151
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BLAST of mRNA_H-canaliculatus_F_contig15396.3988.1 vs. uniprot
Match: A0A4D9D6Q2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6Q2_9STRA)

HSP 1 Score: 157 bits (397), Expect = 5.360e-41
Identity = 95/179 (53.07%), Postives = 113/179 (63.13%), Query Frame = 1 
Query:   19 GAPSNYVAGLGRGAVGFTTRSDIGPARTPLAEPGAAGPXXXXXXSSGAAKDPDFGPAPVGYVAGRGRGMGDLAKSNSEGGAGRXXXXXXXXXXXXXXXXGAVDLSESNYDEFSGYQERLFG-DTPYDNDDEEADRIYEAIDEHVDTRRKRRREEAQVEAMKKERQERPKISDQFADLKV 552
            GAP  Y AG GRGA+GFTTRSDIGPAR+ + E                    +FG  P GYVAGRGRGMGDLA+S +EGG  R                   D SESNYD+FSGY   LFG D+PY++DD EAD+IY+AID+ +D+RRKRRREE  +E++KK R ERPK  DQF DLK 
Sbjct:   15 GAPQGYQAGFGRGAIGFTTRSDIGPARSSVPEV-------------------NFGQPPPGYVAGRGRGMGDLARSQAEGGLPREEGDRDKG-----------DYSESNYDDFSGYGGALFGGDSPYEDDDREADKIYQAIDDRMDSRRKRRREEQLLESLKKARAERPKAGDQFTDLKA 163
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BLAST of mRNA_H-canaliculatus_F_contig15396.3988.1 vs. uniprot
Match: A0A7S4D952_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D952_HETAK)

HSP 1 Score: 145 bits (367), Expect = 1.310e-40
Identity = 94/188 (50.00%), Postives = 110/188 (58.51%), Query Frame = 1 
Query:   25 PSNYVAGLGRGAVGFTTRSDIGPARTPLAEPGAAGPXXXXXXSSGAAKDP--DFGPAPVGYVAGRGRGMGDLAKSNSEGGAGRXXXXXXXXXXXXXXXXGAVDLSESNYDEFSGYQERLFGDTPYDNDDEEADRIYEAIDEHVDTRRKRRREEAQVEAMKKERQERPKISDQFADLKVCV---CGASW 573
            PSNYVAGLGRGAVGFTTRSDIGPART   + GAA            A+ P  DFG A  GYVAG GRG   L K                            DLSE+ YD+F+GY ++LF DTPYD  D EAD+IYEAID  +D RRK+RRE   +E ++K RQ++PKISDQF DLK  +     A W
Sbjct:   18 PSNYVAGLGRGAVGFTTRSDIGPARTAAPQSGAA-----------PAQPPVADFGAAXXGYVAGAGRGASILGKRPET-------------------DTTKEDLSETQYDQFTGYSQKLFSDTPYDAADAEADQIYEAIDSRMDMRRKKRRESKMLETIQKFRQDKPKISDQFVDLKKDIGELTAADW 175
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BLAST of mRNA_H-canaliculatus_F_contig15396.3988.1 vs. uniprot
Match: A0A8J2SWX2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SWX2_9STRA)

HSP 1 Score: 152 bits (384), Expect = 3.060e-39
Identity = 102/201 (50.75%), Postives = 117/201 (58.21%), Query Frame = 1 
Query:    1 RHETKTGAPSNYVAGLGRGAVGFTTRSDIGPARTP-----------LAEPGAAGPXXXXXXSSGAA------KDPDFGPAPVGYVAGRGRGMGDLAKSNSEGGAGRXXXXXXXXXXXXXXXXGAVDLSESNYDEFSGYQERLFGD-TPYDNDDEEADRIYEAIDEHVDTRRKRRREEAQVEAMKKERQERPKISDQFADLK 549
            R    T  P+NYVAGLGRGAVGFTTRSDIGPAR             +  PGA  P XX     G        +  D+G AP GYVAG GRGMGD A    E                        DL+E N+D+FSGY   +FGD TPY+NDD EADR+YEA+DE +D+RRKR RE   VE MK+ R+ERPKISDQFADLK
Sbjct:    6 RRVPPTVKPTNYVAGLGRGAVGFTTRSDIGPAREAANTAPGGGLQGMQGPGAMPPPXXMPGMQGLGPGQHGPERTDYGQAPEGYVAGMGRGMGDKAIEQGE-----------TNPIKEKLARETADLNERNFDQFSGYGGSIFGDSTPYENDDAEADRVYEAVDERMDSRRKRAREAKLVETMKRFREERPKISDQFADLK 195
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BLAST of mRNA_H-canaliculatus_F_contig15396.3988.1 vs. uniprot
Match: A0A2P4Y3Q2_9STRA (Pre-mRNA-processing factor (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y3Q2_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.830e-38
Identity = 95/193 (49.22%), Postives = 111/193 (57.51%), Query Frame = 1 
Query:    1 RHETKTGAPSNYVAGLGRGAVGFTTRSDIGPARTPLAEPGAAGPXXXXXXSSGAAKDPDFGPAPVGYVAGRGRGMGDLAKSNSEGGAGRXXXXXXXXXXXXXXXXGAVDLSESNYDEFSGYQER-LFGDTPYDNDDEEADRIYEAIDEHVDTRRKRRREEAQVEAMKKERQERPKISDQFADLKVCVCGASWA 576
            R+   +GAP+NYV GLGRGAVGFTTRSDIGPAR P+ + G               +D  F P      AGRGRG+    +     G G                    D SE+NYDEFSGY  R LF DTPYD DD+EAD IYE +DE +D RRKRRRE  Q+E +KK R+E PKISDQFADLK  +   S A
Sbjct:    9 RNTYASGAPANYVPGLGRGAVGFTTRSDIGPARAPMTQDGT--------------QDAPFLPP-----AGRGRGVEIPGRPGPSAGRGSGTAGMGGFGREKDENEDFGDYSETNYDEFSGYSSRGLFQDTPYDQDDKEADDIYEQVDERMDARRKRRRELKQLEELKKARKEMPKISDQFADLKSSLQNMSDA 182
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BLAST of mRNA_H-canaliculatus_F_contig15396.3988.1 vs. uniprot
Match: A0A5D6YDN0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDN0_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.310e-37
Identity = 114/203 (56.16%), Postives = 130/203 (64.04%), Query Frame = 1 
Query:    1 RHETKTGAPSNYVAGLGRGAVGFTTRSDIGPARTPLAEPGAAGPXXXXXXSSGAAKDPDFGPAPVGYVAGRGRGMGDLAKSNSEGGAGRXXXXXXXXXXXXXXXXGAV----------DLSESNYDEFSGYQER-LFGDTPYDNDDEEADRIYEAIDEHVDTRRKRRREEAQVEAMKKERQERPKISDQFADLKVCVCGASWA 576
            R+   +GAP+NYV GLGRGAVGFTTRSDIGPAR+PL   G A        +   A  P  GP P  ++ G GRG G    S+  GGA  XXXXXXXXXXXX    G            D SE+NYDEFSGY    LF DTPYD DD EAD IY+++DE +DTRRKRRRE   +E +KK RQERPKISDQFADLK  + G S A
Sbjct:    9 RNTYASGAPANYVPGLGRGAVGFTTRSDIGPARSPLTPEGLAADGGALRAAPTTAGPP--GP-PAPFLPGAGRGRG----SDFAGGAXXXXXXXXXXXXXXAGLGGFGRATDENEDFGDYSETNYDEFSGYSSGGLFQDTPYDQDDREADDIYDSVDERMDTRRKRRREVRMLEELKKARQERPKISDQFADLKAGLRGMSDA 204
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BLAST of mRNA_H-canaliculatus_F_contig15396.3988.1 vs. uniprot
Match: F0VZ29_9STRA (Uncharacterized protein AlNc14C1G170 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VZ29_9STRA)

HSP 1 Score: 142 bits (358), Expect = 9.480e-36
Identity = 100/200 (50.00%), Postives = 112/200 (56.00%), Query Frame = 1 
Query:    1 RHETKTGAPSNYVAGLGRGAVGFTTRSDIGPARTPLAEPG----AAGPXXXXXXSSGAAKDPDFGPAPVGYVAGRGRGMGDLAKSNSEGGAGRXXXXXXXXXXXXXXXXGAVDLSESNYDEFSGYQER-LFGDTPYDNDDEEADRIYEAIDEHVDTRRKRRREEAQVEAMKKERQERPKISDQFADLKVC---VCGASWA 576
            R+  ++ AP NYV GLGRGAVGFTTRSDIGPAR PLA  G     AGP        G  +  D  P  +      GRG G        GG GR                   D SESNYDEFSGY    LF DTPYD DD+EAD IYE IDE +D+RRKRRRE   ++ +KK RQERPKI+DQFADLK     V    WA
Sbjct:   31 RNTHESDAPENYVPGLGRGAVGFTTRSDIGPARNPLAPEGLAVAGAGPFPPIMMGRGRGRGTDVVPNEMLLPISAGRGSGTAGM----GGFGRETDENEDFG----------DYSESNYDEFSGYTGAGLFQDTPYDKDDQEADTIYEMIDERMDSRRKRRRELKILQEVKKARQERPKIADQFADLKESLKTVSDEQWA 216
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BLAST of mRNA_H-canaliculatus_F_contig15396.3988.1 vs. uniprot
Match: A0A7S3MCI9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCI9_9STRA)

HSP 1 Score: 142 bits (357), Expect = 1.220e-35
Identity = 90/185 (48.65%), Postives = 112/185 (60.54%), Query Frame = 1 
Query:   25 PSNYVAGLGRGAVGFTTRSDIGPARTPLAEPGAAGPXXXXXXSSGAAKDPD-FGPAPVGYVAGRGRGMGDLAKSNSEGGAGRXXXXXXXXXXXXXXXXGAVDLSESNYDEFSGYQERLFGDTPYDNDDEEADRIYEAIDEHVDTRRKRRREEAQVEAMKKERQERPKISDQFADLKVCVCGASWA 576
            PSNYVAG+GRGA+GFTTRSDIGPAR          P      +      PD FGPAPVGYVAGRGRGMGDLA+   E                        D SESNYDEFSGY E+LF  + Y+ DD EAD+IY+ +DE +D+RRKR RE+  +  ++K+R +  +I+DQFADLK  +   + A
Sbjct:   14 PSNYVAGVGRGAMGFTTRSDIGPAR----------PAPPMGGAXXXXXXPDPFGPAPVGYVAGRGRGMGDLARGQDE-----------LTTKHVQQDNDRGDYSESNYDEFSGYGEKLFTTSNYEEDDAEADKIYDTVDEIMDSRRKRSREQQML--LEKKRAKSVRIADQFADLKEQMANVTTA 175
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BLAST of mRNA_H-canaliculatus_F_contig15396.3988.1 vs. uniprot
Match: A0A7S0XAM5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XAM5_9STRA)

HSP 1 Score: 137 bits (344), Expect = 2.260e-35
Identity = 87/179 (48.60%), Postives = 105/179 (58.66%), Query Frame = 1 
Query:   16 TGAPSNYVAGLGRGAVGFTTRSDIGPARTPLAEPGAAGPXXXXXXSSGAAKDPDFGPAPVGYVAGRGRGMGDLAKSNSEGGAGRXXXXXXXXXXXXXXXXGAVDLSESNYDEFSGYQERLFGD-TPYDNDDEEADRIYEAIDEHVDTRRKRRREEAQVEAMKKERQERPKISDQFADLK 549
            T APS YVAG+GRGAVGFTTRSDIGPAR        A               P+FG APVGYVAGRGRGMG+LAKS  E                        D S+SNYDEFSGY ERLF   TPY++DD+EAD IY++ID+ +  R  +R+ E  +  + K +  +  IS+QFADLK
Sbjct:   14 TTAPSYYVAGIGRGAVGFTTRSDIGPARPAFDPTNPAASTGLLPTVVNPFVTPNFGQAPVGYVAGRGRGMGELAKSQGE-----------MKVPVSSEETDKGDYSDSNYDEFSGYGERLFATGTPYEDDDKEADEIYQSIDKAMANRNNKRQREDAILKLNKAKSNKTSISEQFADLK 181
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BLAST of mRNA_H-canaliculatus_F_contig15396.3988.1 vs. uniprot
Match: K3WCC0_GLOUD (PRP1_N domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WCC0_GLOUD)

HSP 1 Score: 140 bits (353), Expect = 4.430e-35
Identity = 100/198 (50.51%), Postives = 113/198 (57.07%), Query Frame = 1 
Query:    1 RHETKTGAPSNYVAGLGRGAVGFTTRSDIGPARTPLAEPGAAGPXXXXXXSSGAAKDPDFGPAPVGYVAGRGRGMGDLAKSNSE-------------GGAGRXXXXXXXXXXXXXXXXGAVDLSESNYDEFSGYQE-RLFGDTPYDNDDEEADRIYEAIDEHVDTRRKRRREEAQVEAMKKERQERPKISDQFADLKV 552
            R+   +GAP+NYV GLGRGAVGFTTRSDIGPAR P+A  G+  P        GA   P     P    AGRGRG+ DL                   GG GR                   D SE+NYD+FSGY    LF DTPYD DD EAD IYE+IDE +D+RRKRRRE   +E +KK RQERPKISDQFADLK 
Sbjct:    9 RNTYASGAPANYVPGLGRGAVGFTTRSDIGPARAPMAPDGSGAPV------GGA---PGXXAPPYLPGAGRGRGV-DLPXXXXXXXXXXXXXXXXGMGGFGRDVDENEDYG----------DYSETNYDQFSGYSSVGLFQDTPYDQDDREADDIYESIDERMDSRRKRRREVKMLEELKKARQERPKISDQFADLKA 186
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15396.3988.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0M8_9PHAE5.500e-6186.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9D6Q2_9STRA5.360e-4153.07Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S4D952_HETAK1.310e-4050.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8J2SWX2_9STRA3.060e-3950.75Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A2P4Y3Q2_9STRA1.830e-3849.22Pre-mRNA-processing factor (Fragment) n=1 Tax=Phyt... [more]
A0A5D6YDN0_9STRA2.310e-3756.16Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
F0VZ29_9STRA9.480e-3650.00Uncharacterized protein AlNc14C1G170 n=1 Tax=Albug... [more]
A0A7S3MCI9_9STRA1.220e-3548.65Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S0XAM5_9STRA2.260e-3548.60Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
K3WCC0_GLOUD4.430e-3550.51PRP1_N domain-containing protein n=1 Tax=Globispor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig15396contigH-canaliculatus_F_contig15396:105..1353 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score146.4
Seed ortholog evalue1.4e-32
Seed eggNOG ortholog653948.CCA14044
KEGG koko:K12855
KEGG Pathwayko03040,map03040
KEGG ModuleM00354
GOsGO:0000244,GO:0000375,GO:0000377,GO:0000387,GO:0000398,GO:0003674,GO:0003676,GO:0003712,GO:0003713,GO:0003723,GO:0003824,GO:0004553,GO:0004565,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005682,GO:0005684,GO:0005737,GO:0005773,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006355,GO:0006357,GO:0006396,GO:0006397,GO:0006403,GO:0006725,GO:0006807,GO:0006950,GO:0007275,GO:0008134,GO:0008150,GO:0008152,GO:0008380,GO:0009266,GO:0009409,GO:0009628,GO:0009791,GO:0009845,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0015030,GO:0015925,GO:0016043,GO:0016070,GO:0016071,GO:0016458,GO:0016604,GO:0016607,GO:0016787,GO:0016798,GO:0019219,GO:0019222,GO:0022607,GO:0022613,GO:0022618,GO:0030312,GO:0030532,GO:0031047,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032259,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0034622,GO:0034641,GO:0035257,GO:0035258,GO:0043021,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044728,GO:0044877,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046540,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048584,GO:0048856,GO:0050681,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051179,GO:0051252,GO:0051254,GO:0051427,GO:0060147,GO:0060148,GO:0060255,GO:0060964,GO:0060966,GO:0060968,GO:0065003,GO:0065007,GO:0070013,GO:0070920,GO:0071005,GO:0071011,GO:0071013,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0080188,GO:0090304,GO:0090351,GO:0097159,GO:0097525,GO:0097526,GO:0120114,GO:0140110,GO:1901360,GO:1901363,GO:1902494,GO:1902680,GO:1903506,GO:1903508,GO:1903798,GO:1903800,GO:1990904,GO:2000112,GO:2000628,GO:2000630,GO:2000634,GO:2000636,GO:2000637,GO:2001141
EggNOG free text desc.spliceosomal tri-snRNP complex assembly
EggNOG OGsKOG0495@1,KOG0495@2759
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Hectar predicted targeting categoryother localisation
Exons2
Model size579
Cds size579
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929276.3049302-CDS-H-canaliculatus_F_contig15396:104..5331622929276.3049302-CDS-H-canaliculatus_F_contig15396:104..533Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig15396 105..533 +
1696845746.7081642-CDS-H-canaliculatus_F_contig15396:104..5331696845746.7081642-CDS-H-canaliculatus_F_contig15396:104..533Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig15396 105..533 +
1622929276.322564-CDS-H-canaliculatus_F_contig15396:1203..13531622929276.322564-CDS-H-canaliculatus_F_contig15396:1203..1353Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig15396 1204..1353 +
1696845746.7203882-CDS-H-canaliculatus_F_contig15396:1203..13531696845746.7203882-CDS-H-canaliculatus_F_contig15396:1203..1353Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig15396 1204..1353 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig15396.3988.1prot_H-canaliculatus_F_contig15396.3988.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig15396 105..1353 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig15396.3988.1

>prot_H-canaliculatus_F_contig15396.3988.1 ID=prot_H-canaliculatus_F_contig15396.3988.1|Name=mRNA_H-canaliculatus_F_contig15396.3988.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=193bp
RHETKTGAPSNYVAGLGRGAVGFTTRSDIGPARTPLAEPGAAGPPGAAGP
SSGAAKDPDFGPAPVGYVAGRGRGMGDLAKSNSEGGAGRGRGGGRGGGAA
GGGAAGAVDLSESNYDEFSGYQERLFGDTPYDNDDEEADRIYEAIDEHVD
TRRKRRREEAQVEAMKKERQERPKISDQFADLKVCVCGASWA*
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mRNA from alignment at H-canaliculatus_F_contig15396:105..1353+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig15396.3988.1 ID=mRNA_H-canaliculatus_F_contig15396.3988.1|Name=mRNA_H-canaliculatus_F_contig15396.3988.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1249bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15396:105..1353+ (Hapterophycus canaliculatus Oshoro5f female)
CGCCACGAAACGAAAACAGGGGCCCCCTCGAACTACGTGGCCGGTCTGGG
CCGAGGCGCCGTCGGCTTCACCACACGTTCCGACATCGGCCCCGCCCGCA
CCCCTCTCGCGGAGCCTGGGGCAGCCGGCCCGCCAGGCGCTGCTGGGCCA
TCCTCCGGCGCCGCCAAAGACCCAGATTTCGGACCGGCGCCGGTGGGGTA
TGTGGCCGGCCGCGGGCGCGGGATGGGCGATCTCGCCAAGTCCAACAGCG
AGGGCGGGGCGGGGCGAGGGCGCGGCGGGGGTAGGGGGGGCGGGGCGGCT
GGGGGCGGGGCGGCGGGAGCGGTGGACCTGTCGGAGAGCAACTACGACGA
GTTTTCGGGTTATCAGGAGAGACTGTTCGGAGATACGCCGTACGACAACG
ACGACGAGGAGGCGGATAGGATCTATGAGGTGCGTGCCGAGGCGGCGAGG
GTACATCGATGACGGCGCAAGTGTTGCCGTTGGCGGTGACCGGGGGGTTG
TCGTGTGTCGGACCGCAGTGTATTTTCGGAACGGATTGATTGCCCCCAGT
GCTCGTCTTTTTCCTTCTCTCTCCCGATACCACATTACAAGATTACAAGA
TTACAGGATTACAACTGGTTCGTCGTGTGTGATGTGTGTGTTATCGTGTG
TCGGACCGCAGTGTGTTTTCGGAACGGATTGATTGCCCCCAGTGCTCGTC
TCTTTCCTTCTCTCTCCCGATACCACATTACAAGATTACAACTGGTTCGT
GTTCTTGTCTGCCCCGTGCGTCCCCTGCGGGCGAGGATTTCTAGTAGCGG
GGTCGGAGGGGTTCACACCCAGTTGGCGTGGAGCCGAAGATGTTCTCTCT
TTCCTTTGTGCATTTCTTGCAATACCAGGCATGTGCTGTGTGTGTTGTGT
GTGTGGGTGTCCAGCCCTTGCGCGCTCCGACTGGACCATTCGTTCCTCGC
CTGCTTTTGCGACTACAGCCTTCCAACACCAACCTGGGAGTAAACACTCC
TTCCTTGAAAATTGGATGATTTGCATCTGATCGCCAGGCCCATGGACGAT
GTAACTTAAAACGTTCTCACGCTGAATAGCAATAACAACATCGCGACAGG
CTATCGACGAGCACGTGGACACTCGACGTAAGCGACGGCGCGAAGAGGCT
CAAGTGGAGGCGATGAAGAAGGAACGCCAGGAGCGACCAAAGATCAGCGA
TCAGTTCGCGGACCTCAAGGTTTGTGTGTGCGGCGCATCGTGGGCGTAG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig15396:105..1353+

>mRNA_H-canaliculatus_F_contig15396.3988.1 ID=mRNA_H-canaliculatus_F_contig15396.3988.1|Name=mRNA_H-canaliculatus_F_contig15396.3988.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1158bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15396:105..1353+ (Hapterophycus canaliculatus Oshoro5f female)
CGCCACGAAACGAAAACAGGGGCCCCCTCGAACTACGTGGCCGGTCTGGG
CCGAGGCGCCGTCGGCTTCACCACACGTTCCGACATCGGCCCCGCCCGCA
CCCCTCTCGCGGAGCCTGGGGCAGCCGGCCCGCCAGGCGCTGCTGGGCCA
TCCTCCGGCGCCGCCAAAGACCCAGATTTCGGACCGGCGCCGGTGGGGTA
TGTGGCCGGCCGCGGGCGCGGGATGGGCGATCTCGCCAAGTCCAACAGCG
AGGGCGGGGCGGGGCGAGGGCGCGGCGGGGGTAGGGGGGGCGGGGCGGCT
GGGGGCGGGGCGGCGGGAGCGGTGGACCTGTCGGAGAGCAACTACGACGA
GTTTTCGGGTTATCAGGAGAGACTGTTCGGAGATACGCCGTACGACAACG
ACGACGAGGAGGCGGATAGGATCTATGAGCGCCACGAAACGAAAACAGGG
GCCCCCTCGAACTACGTGGCCGGTCTGGGCCGAGGCGCCGTCGGCTTCAC
CACACGTTCCGACATCGGCCCCGCCCGCACCCCTCTCGCGGAGCCTGGGG
CAGCCGGCCCGCCAGGCGCTGCTGGGCCATCCTCCGGCGCCGCCAAAGAC
CCAGATTTCGGACCGGCGCCGGTGGGGTATGTGGCCGGCCGCGGGCGCGG
GATGGGCGATCTCGCCAAGTCCAACAGCGAGGGCGGGGCGGGGCGAGGGC
GCGGCGGGGGTAGGGGGGGCGGGGCGGCTGGGGGCGGGGCGGCGGGAGCG
GTGGACCTGTCGGAGAGCAACTACGACGAGTTTTCGGGTTATCAGGAGAG
ACTGTTCGGAGATACGCCGTACGACAACGACGACGAGGAGGCGGATAGGA
TCTATGAGGCTATCGACGAGCACGTGGACACTCGACGTAAGCGACGGCGC
GAAGAGGCTCAAGTGGAGGCGATGAAGAAGGAACGCCAGGAGCGACCAAA
GATCAGCGATCAGTTCGCGGACCTCAAGGTTTGTGTGTGCGGCGCATCGT
GGGCGTAGGCTATCGACGAGCACGTGGACACTCGACGTAAGCGACGGCGC
GAAGAGGCTCAAGTGGAGGCGATGAAGAAGGAACGCCAGGAGCGACCAAA
GATCAGCGATCAGTTCGCGGACCTCAAGGTTTGTGTGTGCGGCGCATCGT
GGGCGTAG
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