mRNA_H-canaliculatus_F_contig1511.3837.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1511.3837.1
Unique NamemRNA_H-canaliculatus_F_contig1511.3837.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1511.3837.1 vs. uniprot
Match: D7G157_ECTSI (CRAL-TRIO domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G157_ECTSI)

HSP 1 Score: 453 bits (1166), Expect = 5.910e-157
Identity = 214/250 (85.60%), Postives = 234/250 (93.60%), Query Frame = 2 
Query:  485 SELAEDGYPKDLEIPIRYVKGMEGDMVEARRRWIATLKWREEEKVDGILGEPSPHYDIIKEYYPHFYFKHAKSGSLVYYEIPGQISLPKLRENGLDMDSLCRHYVYLTEFLWEELDKNPEGKLFTCMDMKGTKLSMFAGEVKEFLVRSAKMVGAHYPERSEKIFILNAPWWFNVVWKFVTPFVHANTRAKVEVCSGNFIQKLEEFVELDSVPQAVGGQDPTDPLQSPQEIKMREHVMMVLKEKGMEMKPI 1234
            SELAEDGYPKD+EIPIRYVKGMEGD+VEARRRWIATLKWREEEKVDGIL E  PH+DIIK+YYPHFYFKHAK+GS+VYYEIPG+I L KLRENGLDMDSLCRHYVY+TEFLW+ELDKNPEGKLFTCMDMKGTKLSMFAGEVKEFLVRSAKMVGAHYPERS KIFILNAPWWF+VVWKFVTPFVH NTRAKV VC GNF++K+ E ++L++VPQ VGGQDPT PLQ PQE++M EHV+ VLKEKGMEMKPI
Sbjct:   52 SELAEDGYPKDMEIPIRYVKGMEGDVVEARRRWIATLKWREEEKVDGILDEACPHFDIIKKYYPHFYFKHAKNGSVVYYEIPGKIDLNKLRENGLDMDSLCRHYVYITEFLWKELDKNPEGKLFTCMDMKGTKLSMFAGEVKEFLVRSAKMVGAHYPERSYKIFILNAPWWFSVVWKFVTPFVHPNTRAKVVVCGGNFLEKMGELIDLENVPQDVGGQDPTPPLQGPQELQMHEHVVKVLKEKGMEMKPI 301
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BLAST of mRNA_H-canaliculatus_F_contig1511.3837.1 vs. uniprot
Match: A0A835Z260_9STRA (CRAL-TRIO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z260_9STRA)

HSP 1 Score: 330 bits (845), Expect = 1.380e-108
Identity = 151/265 (56.98%), Postives = 198/265 (74.72%), Query Frame = 2 
Query:  437 QASSSAAPEVANGTGPSELAEDGYPKDLEIPIRYVKGMEGDMVEARRRWIATLKWREEEKVDGILGEPSPHYDIIKEYYPHFYFKHAKSGSLVYYEIPGQISLPKLRENGLDMDSLCRHYVYLTEFLWEELDKNPEGKLFTCMDMKGTKLSMFAGEVKEFLVRSAKMVGAHYPERSEKIFILNAPWWFNVVWKFVTPFVHANTRAKVEVCSGNFIQKLEEFVELDSVPQAVGGQDPTDPLQSPQEIKMREHVMMVLKEKGMEMKP 1231
            Q SSSA+      T    L +DGYP DLEIPIRY+KGMEGDM EARRRW+ TLKWR+  KVD +L EP  H+D IK+YYPH+  K AK+G LVYYEIPG+  L KLRENG+D+D L RHY+Y+TEF+W  LD   E KL + MD++G  L+ FAGEV+E++VR+AK++GAHYPERS KIF+LNAPWWFN+VWK ++P +HANTRAKV VC   ++ KL E ++++S+PQ +GG+D    L+S +E+ ++EHV  VL +  +   P
Sbjct:   15 QDSSSASVSATPATNGQPLLDDGYPGDLEIPIRYIKGMEGDMAEARRRWVETLKWRKSYKVDTMLDEPQLHFDAIKKYYPHYVSKRAKNGCLVYYEIPGETDLKKLRENGVDIDQLIRHYIYITEFIWRRLDTGEESKLLSIMDLRGVSLAQFAGEVREYMVRAAKLIGAHYPERSFKIFVLNAPWWFNMVWKVLSPLMHANTRAKVVVCGATYMDKLSELIDIESIPQDIGGRDANYGLKSDEEVALKEHVYKVLADSNLYQAP 279
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BLAST of mRNA_H-canaliculatus_F_contig1511.3837.1 vs. uniprot
Match: A0A7S3Y7R1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y7R1_HETAK)

HSP 1 Score: 211 bits (537), Expect = 3.460e-59
Identity = 88/204 (43.14%), Postives = 138/204 (67.65%), Query Frame = 2 
Query:  524 IPIRYVKGMEGDMVEARRRWIATLKWREEEKVDGILGEPSPHYDIIKEYYPHFYFKHAKSGSLVYYEIPGQISLPKLRENGLDMDSLCRHYVYLTEFLWEELDKNPEGKLFTCMDMKGTKLSMFAGEVKEFLVRSAKMVGAHYPERSEKIFILNAPWWFNVVWKFVTPFVHANTRAKVEVCSGNFIQKLEEFVELDSVPQAVGG 1135
            +P RY++G +GD+ EARRRW  TL+WR E+ VDGIL EP P++ +IK+YYPHF +K  ++G + YYE  G+  +  +R  G+ + +L RHYV+++EFLW  ++ + + +  T MD++G   S F G+ KEF  + + ++ +HY ERS KIF++NAP WFN++WK V P +H NT+ K+ +C     ++L  +V  ++VP   GG
Sbjct:  160 LPDRYIRGCDGDLEEARRRWALTLRWRREQNVDGILDEPQPYFFVIKKYYPHFTYKRGRNGCVTYYEQVGRADIEAMRARGVTIAALVRHYVFVSEFLWRRIEADDDAQAITIMDIEGCGFSQFKGDTKEFFQQCSSVIQSHYVERSNKIFVINAPGWFNMIWKVVRPMLHENTQRKISICGKGRYEELLAYVGPENVPAEYGG 363
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1511.3837.1 vs. uniprot
Match: A0A7S1XKZ6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKZ6_9STRA)

HSP 1 Score: 197 bits (500), Expect = 2.520e-55
Identity = 111/272 (40.81%), Postives = 153/272 (56.25%), Query Frame = 2 
Query:  440 ASSSAAPEVANGTGPSELAEDGYPKD---------LEIP---------IRYVKGMEGDMVEARRRWIATLKWREEEKVDGILGEPSPHYDIIKEYYPHFYFKHAKSGSLVYYEIPGQISLPKLRENGLDMDSLCRHYVYLTEFLWEELDKNPEGKLFTCMDMKGTKLSMFAGEVKEFLVRSAKMVGAHYPERSEKIFILNAPWWFNVVWKFVTPFVHANTRAKVEVCSGNFIQKLEEFVELDSVPQAVGGQDPTDPLQSPQEIKMREHVMMV 1201
            A+ SAAP  A G   +    DGYP           LE P         +R+VKG +GD+ EA RR+  T  WR+EE ++ IL EP    D IK  YPH + +  +SG LVY E  G +++  L+  G++   L R+YV +TEF W  LD   EGKL T +DM+G  LS   G+VK FL  +A +V +HY ERS KIF++  P WF +VW  V PF+HANTR KV +   +F  +L E V  + +P   GG D  +   SP+E+++  H+  V
Sbjct:  100 ATDSAAPAAAAG---NTTTIDGYPNTDPAAMAAYRLEAPEGWDGPPMTVRFVKGCDGDVAEAWRRYGETWAWRKEENINDILNEPQEDIDHIKANYPHAFHRRTRSGQLVYIERLGGVNINALKAGGVNTAELLRYYVKITEFAWRVLDTREEGKLCTILDMRGVSLSDIGGDVKAFLTGAASVVSSHYVERSYKIFVIGVPRWFTLVWAIVKPFLHANTRKKVTILGSSFHDELLEHVAAEHLPPDFGGTDTCEFGTSPEELELLNHIKAV 368
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BLAST of mRNA_H-canaliculatus_F_contig1511.3837.1 vs. uniprot
Match: A0A662WTV4_9STRA (CRAL-TRIO domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WTV4_9STRA)

HSP 1 Score: 201 bits (512), Expect = 1.480e-53
Identity = 94/222 (42.34%), Postives = 141/222 (63.51%), Query Frame = 2 
Query:  482 PSELAEDGYPKDLEIPIRYVKGMEGDMVEARRRWIATLKWREEEKVDGILGEPSPHYDIIKEYYPHFYFKHAKSGSLVYYEIPGQISLPKLRENGLDMDSLCRHYVYLTEFLWEELDKNPEGKLFTCMDMKGTKLSMFAGEVKEFLVRSAKMVGAHYPERSEKIFILNAPWWFNVVWKFVTPFVHANTRAKVEVCSGNFI-QKLEEFVELDSVPQAVGGQDP 1144
            P  LA  G P  +    R++ G +GD  + R R++ TL+WREE ++D IL  P PH++IIK+YYP ++    ++G  VYYE PG+I LP L+  GL ++ L RHY+Y+TE+LW  ++ N  G+  T +D+ G  +    GEV +F+ R++   GAHYPERS  IFI+N P WFN++W+ V P +   TR KV +  G+ I ++LE  ++LD +P  +GG  P
Sbjct:  368 PPALAISGGP--IAFSPRFIAGEKGDEEKGRLRYLNTLEWREENQIDNILVTPHPHFEIIKKYYPQYFHGRTRAGLPVYYERPGKIDLPALKREGLSIEDLLRHYMYITEYLWRVVEPNDAGRSITVLDVTGIGMYDLGGEVLDFIKRASSFTGAHYPERSAHIFIINIPGWFNMIWRMVKPLIDPVTREKVHMLKGSAILRELETLIDLDQIPSDLGGNGP 587
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1511.3837.1 vs. uniprot
Match: I2CQU5_NANGC (Phosphoinositol transporter n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQU5_NANGC)

HSP 1 Score: 190 bits (482), Expect = 3.580e-53
Identity = 101/241 (41.91%), Postives = 145/241 (60.17%), Query Frame = 2 
Query:  524 IPIRYVKGMEGDMVEARRRWIATLKWREEEKVDGILGEPSPHYDIIKEYYPHFYFKHAKSGSLVYYEIPGQISLPKLRENGLDMDSLCRHYVYLTEFLWEELDKNPEGKLFTCMDMKGTKLSMFAGEVKEFLVRSAKMVGAHYPERSEKIFILNAPWWFNVVWKFVTPFVHANTRAKVEVCSGN-FIQKLEEFVELDSVPQAVGGQ----DPTDPLQ--SPQEIKMREHVMMVLKEKGMEM 1225
            +P R++ G  GDM EA RRW  T +WR E   DGIL EP P++D+IK+ YP +Y     +G  VY+E  GQ+  P++R  G  +D L RHYV +TEF W +L  +   K  T   ++G  +   AGE  +FL RS  ++  HYPERS  I I NAP WF V+WK + P V+  T+ KV++ S    ++ L+EF+  +++P   GG+    D  D  +  SPQE+ +REHV+ V K+ G+EM
Sbjct:  100 LPQRFIDGCLGDMTEAMRRWNLTCEWRREYGTDGILDEPQPYFDLIKQCYPSWYCGEGINGDPVYWERSGQVDQPRMRVAGCGIDELLRHYVMVTEFCWVKLYPDETKKTITVFSVEGVGIRDLAGEAFDFLRRSIHLISEHYPERSAVIMITNAPSWFAVLWKIIRPMVNERTQKKVKIVSKKETLECLKEFIPEENIPVEYGGKLRFGDGVDTARWKSPQEVALREHVLAVNKKYGVEM 340
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1511.3837.1 vs. uniprot
Match: A0A4D9DA19_9STRA (CRAL-TRIO domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DA19_9STRA)

HSP 1 Score: 187 bits (474), Expect = 1.220e-52
Identity = 101/255 (39.61%), Postives = 154/255 (60.39%), Query Frame = 2 
Query:  485 SELAEDGYPKDLEIPI-RYVKGMEGDMVEARRRWIATLKWREEEKVDGILGEPSPHYDIIKEYYPHFYFKHAKSGSLVYYEIPGQISLPKLRENGLDMDSLCRHYVYLTEFLWEELDKNPEGKLFTCMDMKGTKLSMFAGEVKEFLVRSAKMVGAHYPERSEKIFILNAPWWFNVVWKFVTPFVHANTRAKVEVCSGN-FIQKLEEFVELDSVPQAVGG----QDPTDPL--QSPQEIKMREHVMMVLKEKGMEM 1225
            S LA+     D + P  R++ G  GDM EA+RRW  TL+WR+E   D IL +P   +D+IK+ YPH+Y    ++G  VYYE  GQ+   ++R  G  ++ L  HY+++TEF + +L  +   K  T +D++G  +   AGE  +FL RS  ++G HYPERS  I I+ AP WF+V+WK + P +++ T+AK ++CS     Q ++EFV+ + +P   GG     D  D    QSP+E++MRE V+ V +  G+EM
Sbjct:   43 SNLAKKVETPDPDKPNQRFIDGCLGDMEEAKRRWRITLQWRKEFGTDEILEKPHKFFDLIKDAYPHWYCCQGRTGQPVYYERSGQVDQRRMRAAGCGVEELVWHYIWMTEFCYNQLHPSETAKTITILDVQGVGIRDLAGEAFDFLRRSIHLIGEHYPERSLVIMIVGAPTWFSVLWKIIRPLINSRTQAKCKICSKKETFQTIKEFVDPEFIPVEYGGLLKYSDQPDSCRRQSPEEVRMREFVLAVNRRHGVEM 297
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1511.3837.1 vs. uniprot
Match: W2QZT3_PHYPN (CRAL-TRIO domain-containing protein n=24 Tax=Phytophthora TaxID=4783 RepID=W2QZT3_PHYPN)

HSP 1 Score: 193 bits (490), Expect = 3.900e-52
Identity = 86/203 (42.36%), Postives = 132/203 (65.02%), Query Frame = 2 
Query:  533 RYVKGMEGDMVEARRRWIATLKWREEEKVDGILGEPSPHYDIIKEYYPHFYFKHAKSGSLVYYEIPGQISLPKLRENGLDMDSLCRHYVYLTEFLWEELDKNPEGKLFTCMDMKGTKLSMFAGEVKEFLVRSAKMVGAHYPERSEKIFILNAPWWFNVVWKFVTPFVHANTRAKVEVCSGNFIQK-LEEFVELDSVPQAVGGQ 1138
            R++ G +GD  + R R++ATL+WR++  +D IL  P P+++ IK+YYP ++    + G  VYYE PG+I LP L+  GL +D L RHY+Y+TE+LW  ++ N  G+  T +D+ G  +    GEV +F+ R++   GAHYPERS  IFI+N P WFN++W+ V P +   TR KV +  G+ I K LE  ++L+++P   GG+
Sbjct:  369 RFIAGEKGDEEKGRARYLATLEWRKDNNIDNILVTPHPNFETIKKYYPQYFHGRTRDGLPVYYERPGKIDLPALKREGLSIDDLLRHYMYITEYLWRVVEPNDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPMIDPVTREKVHMLKGSAILKELETLIDLENIPSDFGGE 571
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1511.3837.1 vs. uniprot
Match: A0A3F2RWM8_9STRA (Threonine ammonia-lyase n=6 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RWM8_9STRA)

HSP 1 Score: 196 bits (497), Expect = 1.350e-51
Identity = 87/203 (42.86%), Postives = 135/203 (66.50%), Query Frame = 2 
Query:  533 RYVKGMEGDMVEARRRWIATLKWREEEKVDGILGEPSPHYDIIKEYYPHFYFKHAKSGSLVYYEIPGQISLPKLRENGLDMDSLCRHYVYLTEFLWEELDKNPEGKLFTCMDMKGTKLSMFAGEVKEFLVRSAKMVGAHYPERSEKIFILNAPWWFNVVWKFVTPFVHANTRAKVEVCSGNFI-QKLEEFVELDSVPQAVGGQ 1138
            R+V G +GD+ + R+R++ TL+WR+E  +D IL  P P+++IIK+YYP ++    + G  VYYE PG+I LP L+  GL +D L RHY+Y+TE+LW  ++ N  G+  T +D+ G  +    GEV +F+ R++   GAHYPERS  IFI+N P WFN++W+ V P +   TR KV +  G+ I ++LE  ++L+++P   GG+
Sbjct:  247 RFVAGEKGDVEKGRQRYLHTLEWRKENNIDNILVTPHPNFEIIKKYYPQYFHGRTRDGLPVYYERPGKIDLPALKREGLSIDDLLRHYMYITEYLWRVVEPNDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPLIDPVTREKVHMLKGSAILRELETLIDLENIPSDFGGE 449
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1511.3837.1 vs. uniprot
Match: A0A7S4DBX9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBX9_HETAK)

HSP 1 Score: 188 bits (477), Expect = 2.090e-51
Identity = 86/206 (41.75%), Postives = 134/206 (65.05%), Query Frame = 2 
Query:  524 IPIRYVKGMEGDMVEARRRWIATLKWREEEKVDGILGEPSPHYDIIKEYYPHFYFKHAKSGSLVYYEIPGQISLPKLRENGLDMDSLCRHYVYLTEFLWEELDKNPEGKLFTCMDMKGTKLSMFAGEVKEFLVRSAKMVGAHYPERSEKIFILNAPWWFNVVWKFVTPFVHANTRAKVEVCS-GNFIQKLEEFVELDSVPQAVGGQ 1138
            +P ++V G   DMVEA+RRW  T +WR +EK+D IL EP PH+ +IK++YPHF    AKSG++VYYE  G+I L  +  +G+ +D   RHYV++TE+LW  L    + K  + +D+ G +LS  AG+V +F+ +S+ ++  +YPE +E I ++N P WF+++WK V P V+  T+ K+ + +  N +  L EF+  D +P   GGQ
Sbjct:  130 VPRKFVDGCFQDMVEAKRRWAMTHRWRVKEKIDTILDEPQPHFKVIKQHYPHFMCGRAKSGNIVYYERLGEIDLGAIAASGITVDQCVRHYVFITEYLWRILSPGDKDKTVSVLDVAGVRLSDLAGDVLDFVKKSSAVIQNNYPESAEAILLVNCPSWFSLLWKIVKPLVNEVTQKKIRIVNTANSLGALREFIPEDQIPAEYGGQ 335
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1511.3837.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G157_ECTSI5.910e-15785.60CRAL-TRIO domain-containing protein n=2 Tax=Ectoca... [more]
A0A835Z260_9STRA1.380e-10856.98CRAL-TRIO domain-containing protein n=1 Tax=Tribon... [more]
A0A7S3Y7R1_HETAK3.460e-5943.14Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S1XKZ6_9STRA2.520e-5540.81Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A662WTV4_9STRA1.480e-5342.34CRAL-TRIO domain-containing protein n=2 Tax=Nothop... [more]
I2CQU5_NANGC3.580e-5341.91Phosphoinositol transporter n=1 Tax=Nannochloropsi... [more]
A0A4D9DA19_9STRA1.220e-5239.61CRAL-TRIO domain-containing protein n=2 Tax=Monodo... [more]
W2QZT3_PHYPN3.900e-5242.36CRAL-TRIO domain-containing protein n=24 Tax=Phyto... [more]
A0A3F2RWM8_9STRA1.350e-5142.86Threonine ammonia-lyase n=6 Tax=Phytophthora kerno... [more]
A0A7S4DBX9_HETAK2.090e-5141.75Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1511contigH-canaliculatus_F_contig1511:1001..6883 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score459.9
Seed ortholog evalue8.7e-127
Seed eggNOG ortholog2880.D7G157
EggNOG free text desc.macromolecule localization
EggNOG OGsKOG1471@1,KOG1471@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionCRAL-TRIO domain
Ec32 orthologEc-08_005340.1
Exons7
Model size1234
Cds size870
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1511.3837.1prot_H-canaliculatus_F_contig1511.3837.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1511 1001..6519 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929253.9531584-CDS-H-canaliculatus_F_contig1511:1000..11111622929253.9531584-CDS-H-canaliculatus_F_contig1511:1000..1111Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1511 1001..1111 -
1696845737.793165-CDS-H-canaliculatus_F_contig1511:1000..11111696845737.793165-CDS-H-canaliculatus_F_contig1511:1000..1111Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1511 1001..1111 -
1622929253.9658132-CDS-H-canaliculatus_F_contig1511:1609..17171622929253.9658132-CDS-H-canaliculatus_F_contig1511:1609..1717Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1511 1610..1717 -
1696845737.8044524-CDS-H-canaliculatus_F_contig1511:1609..17171696845737.8044524-CDS-H-canaliculatus_F_contig1511:1609..1717Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1511 1610..1717 -
1622929253.975717-CDS-H-canaliculatus_F_contig1511:2192..22971622929253.975717-CDS-H-canaliculatus_F_contig1511:2192..2297Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1511 2193..2297 -
1696845737.8166797-CDS-H-canaliculatus_F_contig1511:2192..22971696845737.8166797-CDS-H-canaliculatus_F_contig1511:2192..2297Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1511 2193..2297 -
1622929253.9884527-CDS-H-canaliculatus_F_contig1511:2892..29791622929253.9884527-CDS-H-canaliculatus_F_contig1511:2892..2979Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1511 2893..2979 -
1696845737.835666-CDS-H-canaliculatus_F_contig1511:2892..29791696845737.835666-CDS-H-canaliculatus_F_contig1511:2892..2979Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1511 2893..2979 -
1622929254.0027196-CDS-H-canaliculatus_F_contig1511:3274..33931622929254.0027196-CDS-H-canaliculatus_F_contig1511:3274..3393Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1511 3275..3393 -
1696845737.8483477-CDS-H-canaliculatus_F_contig1511:3274..33931696845737.8483477-CDS-H-canaliculatus_F_contig1511:3274..3393Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1511 3275..3393 -
1622929254.018042-CDS-H-canaliculatus_F_contig1511:3957..40631622929254.018042-CDS-H-canaliculatus_F_contig1511:3957..4063Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1511 3958..4063 -
1696845737.858094-CDS-H-canaliculatus_F_contig1511:3957..40631696845737.858094-CDS-H-canaliculatus_F_contig1511:3957..4063Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1511 3958..4063 -
1622929254.1108148-CDS-H-canaliculatus_F_contig1511:6285..65191622929254.1108148-CDS-H-canaliculatus_F_contig1511:6285..6519Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1511 6286..6519 -
1696845737.867156-CDS-H-canaliculatus_F_contig1511:6285..65191696845737.867156-CDS-H-canaliculatus_F_contig1511:6285..6519Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1511 6286..6519 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929254.1238542-UTR-H-canaliculatus_F_contig1511:6519..68831622929254.1238542-UTR-H-canaliculatus_F_contig1511:6519..6883Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1511 6520..6883 -
1696845737.8758302-UTR-H-canaliculatus_F_contig1511:6519..68831696845737.8758302-UTR-H-canaliculatus_F_contig1511:6519..6883Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1511 6520..6883 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1511.3837.1

>prot_H-canaliculatus_F_contig1511.3837.1 ID=prot_H-canaliculatus_F_contig1511.3837.1|Name=mRNA_H-canaliculatus_F_contig1511.3837.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=290bp
MSTFADAPEVTTTAPATVAATPVLQASSSAAPEVANGTGPSELAEDGYPK
DLEIPIRYVKGMEGDMVEARRRWIATLKWREEEKVDGILGEPSPHYDIIK
EYYPHFYFKHAKSGSLVYYEIPGQISLPKLRENGLDMDSLCRHYVYLTEF
LWEELDKNPEGKLFTCMDMKGTKLSMFAGEVKEFLVRSAKMVGAHYPERS
EKIFILNAPWWFNVVWKFVTPFVHANTRAKVEVCSGNFIQKLEEFVELDS
VPQAVGGQDPTDPLQSPQEIKMREHVMMVLKEKGMEMKPI
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mRNA from alignment at H-canaliculatus_F_contig1511:1001..6883-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1511.3837.1 ID=mRNA_H-canaliculatus_F_contig1511.3837.1|Name=mRNA_H-canaliculatus_F_contig1511.3837.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5883bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1511:1001..6883- (Hapterophycus canaliculatus Oshoro5f female)
CCAACACAGGCCTCCTTTCCTCTGCTCAAACAAAACGCAAAGAGAGTGGG
AAGGTAGAAGCGGGCTTTTACACGCGAACTCCCACTGCTGTGCTACTCAA
GTCTTGTGCACGCGGCGCCTCGGCAGGTCCTGATAGCTGATAATCTGCGG
CGCACGGAGGCTGCCATACGTCAACGGGAACCTTGACTGCCGTGGTATAT
TGCGGTCTGCTCACCGGCACGCGCGGGCGGCGGCGGCACATCTATTTATC
TCTACCCCTCCTGTTCTGTCAGGTGTTCTGTCAACAGCCCCAGGCGACAC
AGCTTGGGAATTTCGCGCGTCGCTGCCCCACCGCTCGCAGCAGACAGGCA
GCGGAGTGGCAACGATGTCGACCTTTGCGGACGCTCCGGAGGTGACAACA
ACAGCACCGGCAACGGTAGCAGCGACTCCCGTGCTGCAGGCGTCGTCGAG
CGCAGCACCGGAGGTTGCAAACGGGACGGGTCCAAGCGAATTGGCCGAGG
ATGGTTACCCGAAGGACTTGGAGATTCCCATTCGCTACGTGAAGGGGATG
GAGGGAGACATGGTGGAAGCCCGCCGGCGATGGATTGCCACTCTCAAGGT
AAGGAGCCGGACCGCGCTCTCTACTGCGCACTTTTCGGCAGAACTGCTAC
CTGTATGTCCTTCTTCCGTGCGGGTTTTGTAGCACATCACCTAGGGCTTA
CACGTGCGAGACCATTTGGGCGTGTCTTTTTTTTCTTGAGCAGGAGATTT
TTTTTTGAGACTGTACGCCGGGCGCGGCCACGTGCTCGGTTGCGCCCTAC
CAAGGCTCTCACGGGGCGAAACTACAACGACATGCAGAGGTTGAACGATG
CTCGGCTCTACGAGCACCACAGTAGTTGTAAAAAAACTCCAAACCAAGCG
GCCCATCAAGCCCCGGCGGTGTACAGGAGAGCCCGCCGCGGAAAGGTTAA
GGTTCTGGTCGGCGCAATTGGGACGACGATGCACTCAAAATCAACAGTAC
GACAAATACAAGTATGGCGTCGACATCCACGTCGGTGCCACTGCCGGGTT
GAAACATCGAGGAGCGCGCACCCGAGCTCGCAAACATGACGTTAGAGGCC
GCCACATTCGTGAAATGCTGGAGACAAAGCACCTGGAGCGGGGTCGGGGC
TATCCATGTTCTGGTTGGTTCGTTTCTTGCCCGCACGACACAGACACACA
CACACACGAATTAGTTTCGACTACCCCTGACACGAGCAGTGTATTTTATT
TTTTCCAGTTTTTTTCGCCCCGTTTTTTGTGATCATACAACAACCACGCT
CTTGTCTTTTTCTCCTCCTGCGCCATGTTCCCCCGTCGGAACAGCGGTGG
TCGTCCAACCAGCCCTCCCCCACACACCGAGGCGACCACCCGTCAATCTC
GAGACAAGACGCCGTTTCCTGCTTTCATTCGCCGTGCACCCCGAACAGCC
AAGGACGCCGCATATGGCTCCCCCCATTTTTTTGATGCCATGCATTCCTG
GAACTCGCACGCCATGGAGATTCACCTCGAGTACTGCCCCAAGTTTTCTG
TTTGCTGTCTGGCTGAAACCTCTCAGATCTTGGAAACCTTTCAGATCTTC
GTATTAATGGCATTCCTAGGTCGTAGCGCCGAAGTTGTGAGTTCGGATCT
TCTCTCCTACTCGTAGATGAAAATGCGCAATTTTGAGCTGGAAAGCTAGA
GAGAGATGAAATCGTAATTAAACCGCGGGACAGACGGACAGACGTGAGGG
ACAGCCCGTAGTATACTGAACTCGATGGAGTTAAGGCAAAAAAAAAGGGG
GGAAGGAAAGCGAAGACCCGATACCTCCACCTGTACATCTTTGTCTTCCT
CGTAGTCCGGAGGACATCGTATCTGCACGTGTGTAGCTGCTAGTATCTGC
GTCTCAAATCAAACACCAACCCCTAGAGATGAACTAGCCCCGACATTTGG
ACCGGAAACAGACACACGGGTTGGCTGGTGGGAAGTGGCTGCTGTCGAAT
GTTCTTTTACGTCAGAGGCCTGTAGTATACACTTTTGAAAAAAAGTATAC
TTTTGAAACAGTTCGCGATTCGACGGGTGAGGAGGTTCACGTGGCAAGCG
TAACCATTTGTGTGTTGCCATCGATGCTGTGCGGGTTGTATCATAGCTGT
CAGTGCCGAAAATGGCACTATGAAAGCAACATTTGACAGTGGTTGCCGCG
TGAGTTGGTGCGGCTACCCTCGGCCGCTGAATGAAAGGGACTGGCAAAAA
TTGGCGCCCGGCTACCGTCCTCAAAACTGCTGTACCTGTTTGCTTCGAGG
AACTGGCCCGTGCTTCTGGGTGTCGGCGTGTCGCGATCGAATGCGTTCGT
GGTGGGTCTGGTTTTGCTTGGAAGGCGCTTGCGTGTGCGCATGGATATTA
TGAAGCCATCGACTTCGTTTCCCGCTTGTTGAGCATCGTGACACGAAATG
TGCCAGATAGTGTGGAATGTGTTCCATGGTGTGAAGATGAATCACGAGAG
CGACAGCAGCAATCGAGAGCTTAAACAGCGACATGTCTTTGTAGTGTCCA
ATTTCCGTCCACCCCCAGCACTTCGAGCAAAGAAGTACTCGAGAGAAGGA
GGGTTCGTATGTGACGAGTAACCCTGACGACTATGCATCCACAAACACCA
AACGTTTACCGCAGTCCAATCTAATGCACGACGCTGCGTGCAGTTGCAGT
TGTATAGCAAGGGCAAGTGTGAATGTTGCGCTCTACTGTCCAAAGTGAAC
TCCCGGCGGCAATCGTAATCCTACTCCGCCGCCCCCCCCCCCCCACCCCA
TGCATCCCAATGCGCCGCAGTGGAGAGAAGAAGAGAAGGTGGACGGGATC
TTGGGCGAGCCGAGTCCACACTACGACATCATCAAGGAATATTACCCCCA
CTTCTACTTCAAACATGCTAAGAGCGGTGAGCCCCTCCCCCCTCCCCACC
ATCACCGTTCCGTCCGGTGACGAACGCAGGTAGCCGATAGCATTCCCCCT
GCACACTGCACGTAGCCCTTGTTTCAAAGCGACATCGTTGTGGCACTTTT
CGCTCCATGAGAGCCCTGTTTTGGGCACCGAGACCGCATCTGCTGTCGAA
AACGCGCGGAAGACTGCCTGCTTCCTCCGGCAAAAAAAAACGAGCGGATT
TCCGGTCTCAACAAAGGACAAAACCCACCCGAAGCAAGACGCACTGAACT
GACTCCGCACCCGATGCTGCGGTGCTCCCATGCACACGCGCCGCCTTGCT
GGACGCGGTCCGCTAGCCCGGTGCCCACCCCTCTCGCCCCTGCCCTGCCT
CTTGTTCGCTTGCTTCTCTCTCTCTGGCCCTCTCTCTCTGGCCCTCTCTC
TCTCTCTCTCATACCCGCACGCTTGTTGTACCGACTCCGGCGGAGCCTTC
CTCTCGACCTGCTCGTCAAACCTGCCCTCCCTCTCTCCCTCCCTCCCTCC
ATCTGTCCCCTCTCCCCCGTCACGATCACGATCCGCACAGGCAGTCTAGT
GTACTACGAGATCCCGGGACAGATCAGCCTGCCAAAGCTCAGGGAGAACG
GGCTAGATATGGACTCGCTTTGCCGCCACTACGTCTATCTCACGGAGTTC
TTGTGGGAGGTGCGGATTGACGTCTGACGTTTGGCATCCGGCGGCCCGTT
CCTCTGGTTGTCCGTTTTGCCGTCTCGTTCTGGAGGCGTGACGTTGCCGG
CACGACGAGCACAAGGAAGAGGTTGGAATTGGGGGCAGTTGGGTCGGCCG
CGTTTCTCAGCTGCGGCAAGACTATCATTGGTTACCAAAAGCAGCAGCAT
CAACAGCAACAGTAGCAGCAACAGTAGCAGCAGCAACAAGACACGGATGG
CAACACTAGTGGCGTACGTTGTCTTCCCCCGAACGAAAACGAAACTGCGA
TCAGGAGCTGGACAAGAATCCCGAGGGGAAGCTGTTCACGTGTATGGACA
TGAAGGGGACCAAGCTATCGATGTTCGCGGGAGAGGTCAAGGTGAGAGGG
AGAGAGAGAAAAGAGGAAAGATAAAAGAGAGAGGCAGAGGAGAGAAGGAC
GGGGGGGCGACAGAGGAGAATCGACTTGTTCTTGTTGCTCCGGTCTGTTG
TGTTTCGGAGCTTTGTGTTGCGGTGACTGCTGCTATCTGACCGCAGCGTA
CCCTACCGTAGTAGTTCCTTTTTCGACCCGACCGTGAAGTTGCTCTCTTC
ATCGAGAAGAGTCAGCACGGGACTGTGACTGCTGTCGCATGTGAGGACAA
GTTTCGAAGTAGAGTCAAGAAAAGCGGCACGCGGCCTCCCTCACCAGTGT
CGCCCGCCACAGGTACACGTACGAAATGGTGCTTTGTCGATAAGGCTCCC
TCGTGGCACCTCGCTGAAAGCCATTACCGGAGATCGCCGCCTGCTTTTCC
ACGCCGGTACAGATGAGCGTCAAAGGGCTAAACAAGTTGCGGCGGGAACT
GCTGAACAAATGCGTCCACAGCGCCTTGGAGCGCTCACACACCCGCAGGC
GCACTCGTCAGCGCCTCCGTTGGGATGCGTGGTTCTCCACACGTTTTGGT
TGTTTTCTCGTCTGATGTTCTCGTTTGGTTCGACAGGAGTTTCTCGTACG
GTCGGCGAAGATGGTCGGAGCGCACTACCCGGAGCGCTCGGAGAAGATTT
TCATTCTCAACGCGCCCTGGTGGTTCAACGTGGTGTGGAAGGTGCGTGGA
TCCTCAACCTCGCGCGAGGGAGGGTGAAGGTGGATGGGGGTAAAGACCCG
GGAAGGGTGGGTGGAGGTTCGATGTGTAAGTCATTCTTGGGAGACGAATG
GATGGATAAAAGCGTGTACCCATTCCCCCCCCCCCCCCCCCGCCCCGCAC
ATCACCCACATTTTATACAGTCTCTACGGCAAGCCAACCCCATACCCTCC
ACCCCCCGCACCCGCCCATCCACTCNNNNNNNNNNGGGGGGGGGGGGGAA
AGGCGCGGGGGGGGGGGGGGGGGGGTTGGTGTGTAAGTTATTTTTGGGGG
ACGAAAGGGTGGATAAAAGCGGGTACCCCCCCCCCCCCCCCCCCCCCCCC
CCGCAGTTGCCCCGTTTCTTAATGATTCCTTCAGCACAGCACCCTACTTA
CGCTCTCGCCCCTCGATTCCCCGGTTCACCTCCCCACGCACTCGTCGTTC
CTGTCCGCGCGTGCAGTTCGTGACGCCCTTCGTACACGCCAACACACGGG
CAAAGGTGGAGGTTTGCAGCGGGAATTTCATCCAAAAGTTGGAGGAGTTC
GTCGAGCTCGATAGCGTCCCACAGGTACGCCCGGTCGTAGGTTCTCGGGC
TCGTCACGCGCGCTTCGGTGGCGAAGGCGCCGTTGAGTCAGCGTGGAAGT
CACGTGCGTACGGAAACCCAGCAGGAAGGTCTAGGAGTAAGCTCTCCGTG
GTGGGGGGCCATCAAAAACAACGATACCCCCTCCCCGGTGCTTGCGAGGC
GCCAATGATCACCTCTCCTTTCTTTGTCGGTATTATTCTTAACATCGGGC
TGGACTTATCTTACCCCAAACCAAAAATAGATGAAAACACACGCACAACA
CGAATTTGTCACAATGGTAGTATTTGGTAGCTGTCGGGTGCATCCGCTGC
TGTTGCTGTGGCTAATCTGGACCTCGGCATGCAGACGGCTGGCAGACGTG
CGCGAAGGTGCGGTTTGTTGTCTCCGCGTCGACTTCGAACCCTCTTTGCT
GGTTCCTTCCCCCTTTGACGCGGTTCCTCTGGTTGATCCGTGCGCGCGTG
TGTGCTTGGTTTTGGTGGCCAGGCCGTAGGGGGGCAAGACCCTACGGACC
CGCTGCAGAGCCCGCAAGAGATCAAGATGCGCGAGCACGTGATGATGGTC
TTGAAGGAGAAGGGCATGGAGATGAAGCCAATC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1511:1001..6883-

>mRNA_H-canaliculatus_F_contig1511.3837.1 ID=mRNA_H-canaliculatus_F_contig1511.3837.1|Name=mRNA_H-canaliculatus_F_contig1511.3837.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1740bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1511:1001..6883- (Hapterophycus canaliculatus Oshoro5f female)
ATGTCGACCTTTGCGGACGCTCCGGAGGTGACAACAACAGCACCGGCAAC
GGTAGCAGCGACTCCCGTGCTGCAGGCGTCGTCGAGCGCAGCACCGGAGG
TTGCAAACGGGACGGGTCCAAGCGAATTGGCCGAGGATGGTTACCCGAAG
GACTTGGAGATTCCCATTCGCTACGTGAAGGGGATGGAGGGAGACATGGT
GGAAGCCCGCCGGCGATGGATTGCCACTCTCAAGATGTCGACCTTTGCGG
ACGCTCCGGAGGTGACAACAACAGCACCGGCAACGGTAGCAGCGACTCCC
GTGCTGCAGGCGTCGTCGAGCGCAGCACCGGAGGTTGCAAACGGGACGGG
TCCAAGCGAATTGGCCGAGGATGGTTACCCGAAGGACTTGGAGATTCCCA
TTCGCTACGTGAAGGGGATGGAGGGAGACATGGTGGAAGCCCGCCGGCGA
TGGATTGCCACTCTCAAGTGGAGAGAAGAAGAGAAGGTGGACGGGATCTT
GGGCGAGCCGAGTCCACACTACGACATCATCAAGGAATATTACCCCCACT
TCTACTTCAAACATGCTAAGAGCGTGGAGAGAAGAAGAGAAGGTGGACGG
GATCTTGGGCGAGCCGAGTCCACACTACGACATCATCAAGGAATATTACC
CCCACTTCTACTTCAAACATGCTAAGAGCGGCAGTCTAGTGTACTACGAG
ATCCCGGGACAGATCAGCCTGCCAAAGCTCAGGGAGAACGGGCTAGATAT
GGACTCGCTTTGCCGCCACTACGTCTATCTCACGGAGTTCTTGTGGGAGG
CAGTCTAGTGTACTACGAGATCCCGGGACAGATCAGCCTGCCAAAGCTCA
GGGAGAACGGGCTAGATATGGACTCGCTTTGCCGCCACTACGTCTATCTC
ACGGAGTTCTTGTGGGAGGAGCTGGACAAGAATCCCGAGGGGAAGCTGTT
CACGTGTATGGACATGAAGGGGACCAAGCTATCGATGTTCGCGGGAGAGG
TCAAGGAGCTGGACAAGAATCCCGAGGGGAAGCTGTTCACGTGTATGGAC
ATGAAGGGGACCAAGCTATCGATGTTCGCGGGAGAGGTCAAGGAGTTTCT
CGTACGGTCGGCGAAGATGGTCGGAGCGCACTACCCGGAGCGCTCGGAGA
AGATTTTCATTCTCAACGCGCCCTGGTGGTTCAACGTGGTGTGGAAGGAG
TTTCTCGTACGGTCGGCGAAGATGGTCGGAGCGCACTACCCGGAGCGCTC
GGAGAAGATTTTCATTCTCAACGCGCCCTGGTGGTTCAACGTGGTGTGGA
AGTTCGTGACGCCCTTCGTACACGCCAACACACGGGCAAAGGTGGAGGTT
TGCAGCGGGAATTTCATCCAAAAGTTGGAGGAGTTCGTCGAGCTCGATAG
CGTCCCACAGTTCGTGACGCCCTTCGTACACGCCAACACACGGGCAAAGG
TGGAGGTTTGCAGCGGGAATTTCATCCAAAAGTTGGAGGAGTTCGTCGAG
CTCGATAGCGTCCCACAGGCCGTAGGGGGGCAAGACCCTACGGACCCGCT
GCAGAGCCCGCAAGAGATCAAGATGCGCGAGCACGTGATGATGGTCTTGA
AGGAGAAGGGCATGGAGATGAAGCCAATCGCCGTAGGGGGGCAAGACCCT
ACGGACCCGCTGCAGAGCCCGCAAGAGATCAAGATGCGCGAGCACGTGAT
GATGGTCTTGAAGGAGAAGGGCATGGAGATGAAGCCAATC
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