mRNA_H-canaliculatus_F_contig15094.3828.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig15094.3828.1 vs. uniprot
Match: A0A6H5KH14_9PHAE (B2-adapt-app_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KH14_9PHAE) HSP 1 Score: 319 bits (817), Expect = 1.700e-100 Identity = 159/174 (91.38%), Postives = 164/174 (94.25%), Query Frame = 1
Query: 1 EAPYMLEPLVDAWEEEPSCEIKMQLLTAAVKLFFKRPPEMQSMLGRLLARAVNDVSSQDLHDRALLYHRLLKHDPEVARRVCCCERPPVSGEFAEDRDTGRRDIIFSEFNTLSMVYDDHSDNFTLPQFRAKKVKNNTRAFPGEAEANDLSDLGLALELSKASHVADQQQLYQDA 522
EAPYMLEPLVDAWEEEPSC+IKM LLTAAVKLFFKRPPEMQSMLGRLLARAVND+SSQDLHDRALLYHRLLKHDPEVARRVCCCERPPVSGEFAEDRDTGRRD+IFSEFNTLSMVYDDHSDNFTLP+FRAKKVKN TRA PGEAEANDL+DLGLALE SKA DQQQLY A
Sbjct: 486 EAPYMLEPLVDAWEEEPSCQIKMHLLTAAVKLFFKRPPEMQSMLGRLLARAVNDLSSQDLHDRALLYHRLLKHDPEVARRVCCCERPPVSGEFAEDRDTGRRDVIFSEFNTLSMVYDDHSDNFTLPEFRAKKVKN-TRAIPGEAEANDLADLGLALERSKA----DQQQLYDAA 654
BLAST of mRNA_H-canaliculatus_F_contig15094.3828.1 vs. uniprot
Match: A0A835YU68_9STRA (Coatomer protein complex, beta sub-unit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU68_9STRA) HSP 1 Score: 179 bits (455), Expect = 2.650e-48 Identity = 95/167 (56.89%), Postives = 115/167 (68.86%), Query Frame = 1
Query: 1 EAPYMLEPLVDAWEEEPSCEIKMQLLTAAVKLFFKRPPEMQSMLGRLLARAVNDVSSQDLHDRALLYHRLLKHDPEVARRVCCCERPP------------VSGEFAEDRDTGRRDIIFSEFNTLSMVYDDHSDNFTLPQFRAKKVKNNTRAFPGEAEANDLSDLGLA 465
EAPYMLEPL+DA+EEE + E+K+QLLTAA+KLFF RPPE+QSMLGRLLA AV DVSSQDLHDRALLY+RLL+ D + AR V C E + G FAE+RDT RD IF+EFNTL++ Y + SD FT P +R + P A +L+DLGLA
Sbjct: 500 EAPYMLEPLIDAYEEETNVEVKLQLLTAAMKLFFARPPEVQSMLGRLLAAAVEDVSSQDLHDRALLYYRLLRADADAARAVICGEHAAXXXXXXXXXXAALDGPFAEERDTSLRDAIFAEFNTLAVAYGEPSDAFTAPPYRVARAAPPPWMPPEARLARELADLGLA 666
BLAST of mRNA_H-canaliculatus_F_contig15094.3828.1 vs. uniprot
Match: A0A7S4D7F5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7F5_HETAK) HSP 1 Score: 157 bits (397), Expect = 2.290e-42 Identity = 77/149 (51.68%), Postives = 110/149 (73.83%), Query Frame = 1
Query: 1 EAPYMLEPLVDAWEEEPSCEIKMQLLTAAVKLFFKRPPEMQSMLGRLLARAVNDVSSQDLHDRALLYHRLLKHDPEVARRVCCCERPPVSGEFAEDRDTGRRDIIFSEFNTLSMVYDDHSDNFTLPQFRAKKVKNNT-RAFPGEAEAND 444
EAPYMLEPL+D +EEEPS E+++ LL A KLFF+R PE+Q MLGRLLA A+ D S QDLHDRALLY+RLL+ +PE+A++V PV+ FAE+ DTG ++ IF EFN+LS++YD + + P+++ ++ K+N R+ G+ +N+
Sbjct: 83 EAPYMLEPLIDRYEEEPSGEVRLALLVATAKLFFQRAPEVQRMLGRLLAAALRDASCQDLHDRALLYYRLLRANPEIAKQVIASNIQPVA-HFAEEIDTGFKEKIFKEFNSLSILYDKTEEQYIAPEYQVQQSKDNDDRSDDGDNSSNE 230
BLAST of mRNA_H-canaliculatus_F_contig15094.3828.1 vs. uniprot
Match: A0A4D9CWN1_9STRA (B2-adapt-app_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWN1_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.660e-38 Identity = 81/160 (50.62%), Postives = 104/160 (65.00%), Query Frame = 1
Query: 1 EAPYMLEPLVDAWEEEPSCEIKMQLLTAAVKLFFKRPPEMQSMLGRLLARAVNDVSSQDLHDRALLYHRLLKHDPEVARRVCCCE------RPPVSGEFAEDRD-TGRRDIIFSEFNTLSMVYDDHSDNFTLPQFRAKKVKNNTRAFPGEAEANDLSDLG 459
E PY+LEPL+D++ S +K+ LLTAA+KLFFKRPPEMQSMLGRLLA A ND++SQD+HDRALLY+RLL D E A+RV E R + G FAE+RD T RD +F EFNTL+++Y S F P +R K + + F + D + G
Sbjct: 485 EGPYLLEPLIDSYATISSALVKLSLLTAAIKLFFKRPPEMQSMLGRLLAAATNDLTSQDVHDRALLYYRLLVADVEAAKRVVLGEHEVDVNRTTIVGTFAEERDMTTLRDKLFGEFNTLAVIYGKPSSQFVSPSYRIKPAETSLTPFMMGVQIGDSGNNG 644
BLAST of mRNA_H-canaliculatus_F_contig15094.3828.1 vs. uniprot
Match: A0A7S2FSA0_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2FSA0_9DINO) HSP 1 Score: 138 bits (348), Expect = 1.160e-36 Identity = 67/125 (53.60%), Postives = 89/125 (71.20%), Query Frame = 1
Query: 1 EAPYMLEPLVDAWEEEPSCEIKMQLLTAAVKLFFKRPPEMQSMLGRLLARAVNDVSSQDLHDRALLYHRLLKHDPEVARRVCCCERPPVSGEFAEDRDTGRRDIIFSEFNTLSMVYDDHSDNFTL 375
+APY+LEP+++ + EE S +++++LTAAVKLFF RPPEMQ MLGRLL +A+ + + D+ DRALLY+RLL+H PE ARRV C + V EF E+ D RD +F EFNTLS VY + F L
Sbjct: 100 DAPYLLEPMIEGFLEEQSGAVRLEMLTAAVKLFFCRPPEMQQMLGRLLEKAIQESTHPDMRDRALLYYRLLEHSPEEARRVICAPKEVVE-EFQEEMDADARDRVFEEFNTLSTVYKQPAAKFVL 223
BLAST of mRNA_H-canaliculatus_F_contig15094.3828.1 vs. uniprot
Match: A0A7S4RGM6_9DINO (AP complex subunit beta n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4RGM6_9DINO) HSP 1 Score: 143 bits (361), Expect = 1.490e-35 Identity = 74/156 (47.44%), Postives = 102/156 (65.38%), Query Frame = 1
Query: 1 EAPYMLEPLVDAWEEEPSCEIKMQLLTAAVKLFFKRPPEMQSMLGRLLARAVNDVSSQDLHDRALLYHRLLKHDPEVARRVCCCERPPVSGEFAEDRDTGRRDIIFSEFNTLSMVYDDHSDNFTLPQFRAKKV-KNNTRAFPGEAEANDLSDLGLA 465
+APY+LEP++D++ EEPS +++++LTAAVKLFF RPPEMQ MLGRLL +A+ + + D+ DRALLY+RLL+H PE ARRV C + V EF E+ D RD +F EFNTLS VY + F L + + + + P A + + D G A
Sbjct: 469 DAPYLLEPMIDSFLEEPSGAVRLEMLTAAVKLFFCRPPEMQEMLGRLLEKAIQESTHPDMRDRALLYYRLLEHAPEEARRVICAPKEVVE-EFQEEMDADARDRVFEEFNTLSTVYRQPAAKFVLAKGPLANLGASKMQPPPAPASPDQMDDRGAA 623
BLAST of mRNA_H-canaliculatus_F_contig15094.3828.1 vs. uniprot
Match: A0A6V2IVW9_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2IVW9_9STRA) HSP 1 Score: 137 bits (346), Expect = 3.080e-35 Identity = 76/160 (47.50%), Postives = 103/160 (64.38%), Query Frame = 1
Query: 1 EAPYMLEPLVDAWEEEPSCEIKMQLLTAAVKLFFKRPPEMQSMLGRLLARAVNDVSSQDLHDRALLYHRLLKH--DPEVARRVCCCERPPVSG----EFAEDRDTGRRDIIFSEFNTLSMVYDDHSDNFTLPQFRAKKVKNNTRAFPGEAEANDLSDLGL 462
EAPY LE L+D+++E +K+ LLT+ +KLFFKRPPE+Q MLGRLLA+A DVSSQDLHDRAL+Y+RLL DP++ +V + PV G FAE+ D RD + EFNTLS +Y S+NF +++ K V+ + P + A L D G+
Sbjct: 23 EAPYSLEKLIDSYDEIKDASVKIALLTSTIKLFFKRPPEVQKMLGRLLAKATEDVSSQDLHDRALMYYRLLSTAGDPKIVEQVV--SKSPVIGGHGVNFAEEEDKEHRDALLEEFNTLSTLYGITSENFISEEYQVKLVRM-PKEHPLDVGAAPLVDPGV 179
BLAST of mRNA_H-canaliculatus_F_contig15094.3828.1 vs. uniprot
Match: A0A7S1KWR4_ALECA (AP complex subunit beta n=2 Tax=Dinophyceae TaxID=2864 RepID=A0A7S1KWR4_ALECA) HSP 1 Score: 142 bits (358), Expect = 3.980e-35 Identity = 69/125 (55.20%), Postives = 90/125 (72.00%), Query Frame = 1
Query: 1 EAPYMLEPLVDAWEEEPSCEIKMQLLTAAVKLFFKRPPEMQSMLGRLLARAVNDVSSQDLHDRALLYHRLLKHDPEVARRVCCCERPPVSGEFAEDRDTGRRDIIFSEFNTLSMVYDDHSDNFTL 375
+APY+LEP++D + EEPS +++++LTAAVKLFF RPPEMQ MLGRLL +A+ + + D+ DRALLY+RLL+H PE ARRV C + V EF E+ D RD +F EFNTLS VY + F L
Sbjct: 533 DAPYLLEPMIDGFLEEPSGAVRLEMLTAAVKLFFCRPPEMQHMLGRLLEKAIQESTHPDMRDRALLYYRLLEHSPEEARRVVCAPKEVVE-EFQEEMDADARDRVFDEFNTLSTVYKQPAAKFIL 656
BLAST of mRNA_H-canaliculatus_F_contig15094.3828.1 vs. uniprot
Match: A0A7S3SC85_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SC85_9SPIT) HSP 1 Score: 135 bits (340), Expect = 1.320e-34 Identity = 73/153 (47.71%), Postives = 97/153 (63.40%), Query Frame = 1
Query: 1 EAPYMLEPLVDAWEEEPSCEIKMQLLTAAVKLFFKRPPEMQSMLGRLLARAVNDVSSQDLHDRALLYHRLLKHDPEVARRVCCCERPPVSGEFAEDRDTGRRDIIFSEFNTLSMVYDDHSDNFTLPQFRAKKVKNNTRAFPGEAEANDLSDLG 459
+APY+LEP+++ + EE S +++++LTAAVKLFF RPPEMQ MLGRLL +AV + S D+ DRALLY+RLL+H PE ARRV C + V EF E+ D ++D +F EF +LS VY + F V+ A P A D DLG
Sbjct: 153 DAPYLLEPMINGFLEETSGNVRLEMLTAAVKLFFSRPPEMQKMLGRLLEKAVTEASHPDVKDRALLYYRLLEHSPEEARRVICAPKEVVE-EFQEEMDQEQKDRVFDEFGSLSTVYRQPASKFVSQGSVTLGVRR--MAPPPPAGGEDGVDLG 302
BLAST of mRNA_H-canaliculatus_F_contig15094.3828.1 vs. uniprot
Match: A0A7S4VYA9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VYA9_9STRA) HSP 1 Score: 137 bits (346), Expect = 1.570e-33 Identity = 76/160 (47.50%), Postives = 103/160 (64.38%), Query Frame = 1
Query: 1 EAPYMLEPLVDAWEEEPSCEIKMQLLTAAVKLFFKRPPEMQSMLGRLLARAVNDVSSQDLHDRALLYHRLLKH--DPEVARRVCCCERPPVSG----EFAEDRDTGRRDIIFSEFNTLSMVYDDHSDNFTLPQFRAKKVKNNTRAFPGEAEANDLSDLGL 462
EAPY LE L+D+++E +K+ LLT+ +KLFFKRPPE+Q MLGRLLA+A DVSSQDLHDRAL+Y+RLL DP++ +V + PV G FAE+ D RD + EFNTLS +Y S+NF +++ K V+ + P + A L D G+
Sbjct: 678 EAPYSLEKLIDSYDEIKDASVKIALLTSTIKLFFKRPPEVQKMLGRLLAKATEDVSSQDLHDRALMYYRLLSTAGDPKIVEQVV--SKSPVIGGHGVNFAEEEDKEHRDALLEEFNTLSTLYGITSENFISEEYQVKLVRM-PKEHPLDVGAAPLVDPGV 834 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15094.3828.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig15094.3828.1 >prot_H-canaliculatus_F_contig15094.3828.1 ID=prot_H-canaliculatus_F_contig15094.3828.1|Name=mRNA_H-canaliculatus_F_contig15094.3828.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=233bp MLEPLVDAWEEEPSCEIKMQLLTAAVKLFFKRPPEMQSMLGRLLARAVNDback to top mRNA from alignment at H-canaliculatus_F_contig15094:26..2371- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig15094.3828.1 ID=mRNA_H-canaliculatus_F_contig15094.3828.1|Name=mRNA_H-canaliculatus_F_contig15094.3828.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2346bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15094:26..2371- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig15094:26..2371- >mRNA_H-canaliculatus_F_contig15094.3828.1 ID=mRNA_H-canaliculatus_F_contig15094.3828.1|Name=mRNA_H-canaliculatus_F_contig15094.3828.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1398bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15094:26..2371- (Hapterophycus canaliculatus Oshoro5f female)back to top |