mRNA_H-canaliculatus_F_contig1508.3823.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1508.3823.1
Unique NamemRNA_H-canaliculatus_F_contig1508.3823.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1508.3823.1 vs. uniprot
Match: D8LCA9_ECTSI (Abhydrolase domain containing 14B n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCA9_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 3.660e-36
Identity = 60/92 (65.22%), Postives = 74/92 (80.43%), Query Frame = 1
Query:    1 AQQDLFAGYVPIAPGQAISYPPEAFGSVTGVPTLIVYGELDRMGTKASSILQSIPNSRVLPIAGASHACYLDEPGFFHQELAKFLDDDVVFS 276
            ++ +LFAGYVP+APGQA+SY  E F +VTGVP LIVYGELDRMG++ASS+L SIP SRVL + GASH CY+DEP  FH+ L  FL++D  FS
Sbjct:  154 SKPELFAGYVPVAPGQALSYTAEDFAAVTGVPALIVYGELDRMGSRASSLLSSIPGSRVLMVPGASHPCYIDEPDMFHESLLSFLNEDAHFS 245          
BLAST of mRNA_H-canaliculatus_F_contig1508.3823.1 vs. uniprot
Match: A0A8D0BIW2_9SAUR (Abhydrolase domain containing 14A n=2 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0BIW2_9SAUR)

HSP 1 Score: 72.0 bits (175), Expect = 8.450e-13
Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = 1
Query:   22 GYVPIAPGQAISYPPEAFGSVTGVPTLIVYGELDR-MGTKASSILQSIPNSRVLPIAGASHACYLDEPGFFHQELAKFLDD 261
            G+VPIAP     +  + +  +   PTLI+YGE D  +GT++   LQ IPNS+V+ + GA HACYLD+P  FH+ +  FL +
Sbjct:  261 GFVPIAPVGTKDFTAQQYQQIK-TPTLIIYGERDTGLGTQSLQSLQQIPNSKVVMLPGAGHACYLDKPQEFHKAILSFLGE 340          
BLAST of mRNA_H-canaliculatus_F_contig1508.3823.1 vs. uniprot
Match: A0A6I8N635_ORNAN (Abhydrolase domain containing 14A n=4 Tax=Monotremata TaxID=9255 RepID=A0A6I8N635_ORNAN)

HSP 1 Score: 70.9 bits (172), Expect = 9.880e-13
Identity = 39/81 (48.15%), Postives = 51/81 (62.96%), Query Frame = 1
Query:   22 GYVPIAPGQAISYPPEAFGSVTGVPTLIVYGELDRM-GTKASSILQSIPNSRVLPIAGASHACYLDEPGFFHQELAKFLDD 261
            G+VPIAP     Y  E +  V   PTLI+YGELDR+ G K+ + L+ IPN  V+ + GA HACYL++P  FH  L  FL +
Sbjct:  165 GFVPIAPVATNKYSSEQYLGVK-TPTLILYGELDRLLGMKSLNSLRYIPNHSVVKLNGAGHACYLNKPHAFHTVLLDFLSE 244          
BLAST of mRNA_H-canaliculatus_F_contig1508.3823.1 vs. uniprot
Match: A0A7K7SMX5_9TYRA (ABHEA protein (Fragment) n=1 Tax=Sapayoa aenigma TaxID=239371 RepID=A0A7K7SMX5_9TYRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.720e-12
Identity = 39/83 (46.99%), Postives = 49/83 (59.04%), Query Frame = 1
Query:   10 DLFAGYVPIAPGQAISYPPEAFGSVTGVPTLIVYGELDR-MGTKASSILQSIPNSRVLPIAGASHACYLDEPGFFHQELAKFL 255
            D  AG+VPIAP     Y  E +  V   PTLI+YG+ D  +  +A   LQ IP  RV+ +A A HACYLD+P  FH+ L  FL
Sbjct:   56 DQLAGFVPIAPVGTKDYTAEQYWRVQ-TPTLILYGDRDTGLAPQALQNLQHIPEHRVVVVADAGHACYLDKPEDFHRALLGFL 137          
BLAST of mRNA_H-canaliculatus_F_contig1508.3823.1 vs. uniprot
Match: A0A7J7UHN2_RHIFE (Abhydrolase domain containing 14A n=1 Tax=Rhinolophus ferrumequinum TaxID=59479 RepID=A0A7J7UHN2_RHIFE)

HSP 1 Score: 67.8 bits (164), Expect = 1.760e-12
Identity = 38/80 (47.50%), Postives = 49/80 (61.25%), Query Frame = 1
Query:   22 GYVPIAPGQAISYPPEAFGSVTGVPTLIVYGELDRMGTKAS-SILQSIPNSRVLPIAGASHACYLDEPGFFHQELAKFLD 258
            G+VPIAP    +Y  E F +V   PTLI+YGELDR+  + S   L+ +PN  V+ +  A HACYL +P  FH  L  FLD
Sbjct:   46 GFVPIAPASTQNYTQEQFWAVK-TPTLILYGELDRVLARESLRQLRHLPNHSVVKLQDAGHACYLHKPKDFHLVLLAFLD 124          
BLAST of mRNA_H-canaliculatus_F_contig1508.3823.1 vs. uniprot
Match: UPI001E1D4636 (protein ABHD14A-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D4636)

HSP 1 Score: 70.1 bits (170), Expect = 1.900e-12
Identity = 31/79 (39.24%), Postives = 49/79 (62.03%), Query Frame = 1
Query:   22 GYVPIAPGQAISYPPEAFGSVTGVPTLIVYGELD-RMGTKASSILQSIPNSRVLPIAGASHACYLDEPGFFHQELAKFL 255
            G+VP+AP     Y PE +  +  +PTL++YGE D R+G  +   L+++P    + + GA HACY++ P FFH+   +FL
Sbjct:  163 GFVPVAPVGTNKYKPEEYKKLK-IPTLVIYGEKDKRLGVDSKKNLENLPEHTTVEVPGAGHACYMNNPDFFHKHFIEFL 240          
BLAST of mRNA_H-canaliculatus_F_contig1508.3823.1 vs. uniprot
Match: A0A815P7L1_9BILA (Hypothetical protein n=5 Tax=Adineta steineri TaxID=433720 RepID=A0A815P7L1_9BILA)

HSP 1 Score: 71.2 bits (173), Expect = 1.940e-12
Identity = 36/83 (43.37%), Postives = 52/83 (62.65%), Query Frame = 1
Query:    7 QDLFAGYVPIAPGQAISYPPEAFGSVTGVPTLIVYGELDRMGTKASSILQSIPNSRVLPIAGASHACYLDEPGFFHQELAKFL 255
            Q L  G++PI+P    ++    +  V  +PTLIV+GE D+    A   L+ IP+S++L I  ASHACY+D+P  FH EL +FL
Sbjct:  202 QQLIRGFIPISPVGTNNFQTADYEKVK-IPTLIVHGESDKKFQSAIQSLKQIPSSQILTIKNASHACYIDQPLDFHNELRQFL 283          
BLAST of mRNA_H-canaliculatus_F_contig1508.3823.1 vs. uniprot
Match: A0A7J8HL20_ROUAE (Abhydrolase domain containing 14A n=1 Tax=Rousettus aegyptiacus TaxID=9407 RepID=A0A7J8HL20_ROUAE)

HSP 1 Score: 68.2 bits (165), Expect = 5.090e-12
Identity = 38/80 (47.50%), Postives = 49/80 (61.25%), Query Frame = 1
Query:   22 GYVPIAPGQAISYPPEAFGSVTGVPTLIVYGELDRMGTKAS-SILQSIPNSRVLPIAGASHACYLDEPGFFHQELAKFLD 258
            G+VPIAP    +Y  E F +V   PTLI+YGELDR+  + S   L+ +PN  V+ +  A HACYL +P  FH  L  FLD
Sbjct:  116 GFVPIAPASTQNYTQEQFWAVK-TPTLILYGELDRVLARESLRRLRHLPNHSVVKLRDAGHACYLHKPRDFHLALLAFLD 194          
BLAST of mRNA_H-canaliculatus_F_contig1508.3823.1 vs. uniprot
Match: UPI00193A474F (protein ABHD14B-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A474F)

HSP 1 Score: 68.2 bits (165), Expect = 5.350e-12
Identity = 40/81 (49.38%), Postives = 50/81 (61.73%), Query Frame = 1
Query:   19 AGYVPIAPGQAISYPPEAFGSVTGVPTLIVYGELDR-MGTKASSILQSIPNSRVLPIAGASHACYLDEPGFFHQELAKFLD 258
            +GYVP+AP    SY  + + SV  VPTLIVYG+ D  +GT +   L  IPN  VL I  A HACYLD+P  +H  L  FL+
Sbjct:  118 SGYVPVAPVSTGSYINQ-YSSVK-VPTLIVYGDRDATLGTTSFKHLSVIPNHTVLKIPNAGHACYLDQPDVWHNNLRDFLN 196          
BLAST of mRNA_H-canaliculatus_F_contig1508.3823.1 vs. uniprot
Match: A0A833ZSX4_9CHIR (Abhydrolase domain containing 14A n=1 Tax=Phyllostomus discolor TaxID=89673 RepID=A0A833ZSX4_9CHIR)

HSP 1 Score: 67.4 bits (163), Expect = 5.750e-12
Identity = 38/80 (47.50%), Postives = 49/80 (61.25%), Query Frame = 1
Query:   22 GYVPIAPGQAISYPPEAFGSVTGVPTLIVYGELDRMGTKAS-SILQSIPNSRVLPIAGASHACYLDEPGFFHQELAKFLD 258
            G+VPIAP    +Y  E F +V   PTLI+YGELDR+  + S   L+ +PN  V+ +  A HACYL +P  FH  L  FLD
Sbjct:   85 GFVPIAPASTQNYTQEQFWAVK-TPTLILYGELDRILARESLRQLRHLPNHSVVKLHDAGHACYLHKPKDFHLVLLAFLD 163          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1508.3823.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCA9_ECTSI3.660e-3665.22Abhydrolase domain containing 14B n=2 Tax=Ectocarp... [more]
A0A8D0BIW2_9SAUR8.450e-1344.44Abhydrolase domain containing 14A n=2 Tax=Salvator... [more]
A0A6I8N635_ORNAN9.880e-1348.15Abhydrolase domain containing 14A n=4 Tax=Monotrem... [more]
A0A7K7SMX5_9TYRA1.720e-1246.99ABHEA protein (Fragment) n=1 Tax=Sapayoa aenigma T... [more]
A0A7J7UHN2_RHIFE1.760e-1247.50Abhydrolase domain containing 14A n=1 Tax=Rhinolop... [more]
UPI001E1D46361.900e-1239.24protein ABHD14A-like n=1 Tax=Mercenaria mercenaria... [more]
A0A815P7L1_9BILA1.940e-1243.37Hypothetical protein n=5 Tax=Adineta steineri TaxI... [more]
A0A7J8HL20_ROUAE5.090e-1247.50Abhydrolase domain containing 14A n=1 Tax=Rousettu... [more]
UPI00193A474F5.350e-1249.38protein ABHD14B-like n=1 Tax=Styela clava TaxID=77... [more]
A0A833ZSX4_9CHIR5.750e-1247.50Abhydrolase domain containing 14A n=1 Tax=Phyllost... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1508contigH-canaliculatus_F_contig1508:25907..26191 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score133.3
Seed ortholog evalue6.1e-29
Seed eggNOG ortholog2880.D8LCA9
KEGG koko:K13706
EggNOG free text desc.positive regulation of transcription by RNA polymerase II
EggNOG OGs2QR0B@2759,COG0596@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01002
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAlpha/Beta hydrolase fold
Ec32 orthologEc-14_005440.1
Exons1
Model size285
Cds size285
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929250.3528585-CDS-H-canaliculatus_F_contig1508:25906..261911622929250.3528585-CDS-H-canaliculatus_F_contig1508:25906..26191Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1508 25907..26191 -
1696845736.0617876-CDS-H-canaliculatus_F_contig1508:25906..261911696845736.0617876-CDS-H-canaliculatus_F_contig1508:25906..26191Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1508 25907..26191 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1508.3823.1prot_H-canaliculatus_F_contig1508.3823.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1508 25907..26191 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1508.3823.1

>prot_H-canaliculatus_F_contig1508.3823.1 ID=prot_H-canaliculatus_F_contig1508.3823.1|Name=mRNA_H-canaliculatus_F_contig1508.3823.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=95bp
AQQDLFAGYVPIAPGQAISYPPEAFGSVTGVPTLIVYGELDRMGTKASSI
LQSIPNSRVLPIAGASHACYLDEPGFFHQELAKFLDDDVVFSPP*
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mRNA from alignment at H-canaliculatus_F_contig1508:25907..26191-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1508.3823.1 ID=mRNA_H-canaliculatus_F_contig1508.3823.1|Name=mRNA_H-canaliculatus_F_contig1508.3823.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=285bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1508:25907..26191- (Hapterophycus canaliculatus Oshoro5f female)
GCACAACAGGACCTTTTCGCCGGCTACGTGCCGATCGCGCCGGGTCAGGC CATTTCTTACCCGCCCGAGGCCTTTGGCAGTGTGACGGGAGTGCCAACTT TGATCGTCTACGGAGAGCTTGACCGCATGGGGACCAAGGCGTCCTCTATC CTGCAGTCGATTCCCAACTCGCGGGTGCTGCCCATCGCCGGGGCTAGCCA CGCCTGTTACCTCGACGAGCCGGGCTTCTTCCACCAGGAGCTCGCGAAGT TCTTGGATGATGACGTCGTGTTCTCACCTCCATGA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1508:25907..26191-

>mRNA_H-canaliculatus_F_contig1508.3823.1 ID=mRNA_H-canaliculatus_F_contig1508.3823.1|Name=mRNA_H-canaliculatus_F_contig1508.3823.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=570bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1508:25907..26191- (Hapterophycus canaliculatus Oshoro5f female)
GCACAACAGGACCTTTTCGCCGGCTACGTGCCGATCGCGCCGGGTCAGGC
CATTTCTTACCCGCCCGAGGCCTTTGGCAGTGTGACGGGAGTGCCAACTT
TGATCGTCTACGGAGAGCTTGACCGCATGGGGACCAAGGCGTCCTCTATC
CTGCAGTCGATTCCCAACTCGCGGGTGCTGCCCATCGCCGGGGCTAGCCA
CGCCTGTTACCTCGACGAGCCGGGCTTCTTCCACCAGGAGCTCGCGAAGT
TCTTGGATGATGACGTCGTGTTCTCACCTCCATGAGCACAACAGGACCTT
TTCGCCGGCTACGTGCCGATCGCGCCGGGTCAGGCCATTTCTTACCCGCC
CGAGGCCTTTGGCAGTGTGACGGGAGTGCCAACTTTGATCGTCTACGGAG
AGCTTGACCGCATGGGGACCAAGGCGTCCTCTATCCTGCAGTCGATTCCC
AACTCGCGGGTGCTGCCCATCGCCGGGGCTAGCCACGCCTGTTACCTCGA
CGAGCCGGGCTTCTTCCACCAGGAGCTCGCGAAGTTCTTGGATGATGACG
TCGTGTTCTCACCTCCATGA
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