mRNA_H-canaliculatus_F_contig1508.3822.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1508.3822.1
Unique NamemRNA_H-canaliculatus_F_contig1508.3822.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1508.3822.1 vs. uniprot
Match: A0A6H5KL44_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL44_9PHAE)

HSP 1 Score: 545 bits (1403), Expect = 3.540e-183
Identity = 272/355 (76.62%), Postives = 304/355 (85.63%), Query Frame = 2 
Query:  224 AGVGLLTVGLAVACWFIAAGREDRSTSRLAGIRSLRDFQSEEVLKDEDDGRVVTLLGRFAWQKEGEVALVKLIATPLSFKGLRKNLRRLTVGLKSESGAEYAFYDCSMSLWQTFVCGLQGNSYSLEVVAPASERTVNRNRPVTTVMLTETAAMFASVTAPHIEEVVGDGKSLSWLYNVLSKQKEADRVLYEDEDPEYGFLLNVDTKWRTHPDVSAVPREEWHGHPSVAELYCLAICHRRDIRTLRDVRAEHVPMLKEMYRRGIETIEAVYGVPEEQLRVFVHYMPQFYHFHVHFTR---VHNTIGVEAERAHLLLDVIQNAETAPANGGGSYYETRTMQFRVRENDALHQAFKDA 1279
            AGV LL +G+AVA W IA       TS LAGIRSLR F+ EEVLKDEDDGRVVT LGRFAWQKEGEVALVKLIA PLS  GL+ NL RL++ LKS+SGAEY+FYDCS+SLW TF+ GL+GNSYSLEVVAPASERTVNRNRPVTT MLTETA M ASVT PH++ +VGDGKSLSWL+NVLSK+KEA+RVLYEDEDPE+GFLLN+DTKWRTHPD+S  PR EW GHPSV ELYCLAI H+R IRTLRD+RA+HVPMLKE+Y RG+ETIEAVYGVPE+QLRVFVHYMPQF+HFHVHFTR   +HNTIGVEAERAHLL+D+IQN E         +YETRTMQF VRENDALH AFK+A
Sbjct:   16 AGV-LLAIGVAVAFWVIARRGRKSVTSALAGIRSLRGFEPEEVLKDEDDGRVVTFLGRFAWQKEGEVALVKLIAKPLSLSGLKDNLSRLSIRLKSDSGAEYSFYDCSLSLWYTFLRGLEGNSYSLEVVAPASERTVNRNRPVTTAMLTETAEMHASVTGPHMDRIVGDGKSLSWLFNVLSKEKEAERVLYEDEDPEHGFLLNIDTKWRTHPDISTTPRHEWEGHPSVGELYCLAISHQRGIRTLRDLRAKHVPMLKEIYGRGVETIEAVYGVPEDQLRVFVHYMPQFFHFHVHFTRRVVLHNTIGVEAERAHLLVDIIQNLER-----DSYFYETRTMQFGVRENDALHTAFKNA 364
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1508.3822.1 vs. uniprot
Match: A0A0M0JXI4_9EUKA (Scavenger mRNA-decapping enzyme n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JXI4_9EUKA)

HSP 1 Score: 291 bits (745), Expect = 5.180e-87
Identity = 153/306 (50.00%), Postives = 209/306 (68.30%), Query Frame = 2 
Query:  377 VVTLLGRFAWQKEGEVALVKLIATPLSF-KGLRKNLRRLTVGLKSESGAEYAFYD--CSMSLWQTFVCGLQGNSYSLEVVAPASERTVNRNRPVTTVMLTETAAMFASVTAPHIEEVVGDGKSLSWLYNVLSKQKEADRVLYEDEDPEYGFLLNVDTKWRTHPDVSA--VPREEWHGHPSVAELYCLAICHRRDIRTLRDVRAEHVPMLKEMYRRGIETIEAVYGVPEEQLRVFVHYMPQFYHFHVHFTRVHNTIGVEAERAHLLLDVIQNAETAPANGGGSYYETRTMQFRVRENDALHQAFKDA 1279
            ++ +LGRF+WQ +GE ALVKL+  PLS   GL   L  L V + S SGAEY +YD  CS+S   T   GL+  +YS+EV+APASE+ + R RP    ++TE AA++ASV  P IE +  D K+++W+ N+L+ +KE +R+L+ D DPE GFLLN+DTKW++HP   +    R  W  H SV +LYCLAICHRRD+R+LRD+RA H+P+L+ +   G   IEAVYGVP ++LRVFVHY PQFYHFHVHFTR+HN +G + ERAHLL  +I   E       G  Y  +T+ ++++ ND L +A + A
Sbjct:    1 MIVVLGRFSWQAKGETALVKLVPKPLSLASGL---LGALDVNVSSYSGAEYCYYDGRCSLSSLCT-TAGLRP-AYSVEVIAPASEKQIARLRPERGTLITEDAALYASVVQPFIESM--DPKAIAWVANLLALKKETERLLFNDSDPERGFLLNIDTKWKSHPPCVSDEFARVAWRCHASVQDLYCLAICHRRDLRSLRDLRARHLPLLRHILHEGCRVIEAVYGVPVDELRVFVHYQPQFYHFHVHFTRLHNDLGCQVERAHLLPQIIAELEA-----DGDAYAKKTLWYQLKANDKLLEAIRAA 294
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1508.3822.1 vs. uniprot
Match: A0A7S3SDN6_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SDN6_EMIHU)

HSP 1 Score: 280 bits (717), Expect = 6.610e-82
Identity = 156/332 (46.99%), Postives = 211/332 (63.55%), Query Frame = 2 
Query:  305 RLAGIRSLRD---FQSEEVLKDEDDGRVVTLLGRFAWQKEGEVALVKLIATPLSFKGLRKNLRRLTVGLKSESGAEYAFYDCSMSLWQTFVCGLQGNSYSLEVVAPASERTVNRNRPVTTVMLTETAAMFASVTAPHIEEVVGDGKSLSWLYNVLSKQKEADRVLYEDEDPEYGFLLNVDTKWRTHPDVSAVP--REEWHGHPSVAELYCLAICHRRDIRTLRDVRAEHVPMLKEMYRRGIETIEAVYGVPEEQLRVFVHYMPQFYHFHVHFTRVHNTIGVEAERAHLLLDVIQNAETAPANGGGSYYETRTMQFRVRENDALHQAFKDAAS 1285
            R  G+ SLRD   F+  EVL  E +G  V LLG F+WQ  GE ALVK+ A   +   +  +L      L S SGAEYA+Y  S SL        +  +++LEV+APASE+ + R+RP   V +TETAA++ +  AP+I+ +  D KS SW+   L   KEA+RVL+ D     GFLLNVDTKW++HP  +A P  R  W GH +V +LYCLAICHRRDIR+LRD+ AEH+P+L+ +  +G+ T+   YGV    LRVFVHY PQFYHFHVHFTR+HN +G +AERAHLL +VI + E      G  Y + +T+ ++++ ND L    ++  S
Sbjct:   33 RARGVSSLRDLSSFKQSEVLS-EGEGHAV-LLGAFSWQPAGERALVKISAVDRASSDVAAHLE---TSLSSYSGAEYAYYRGSASLASVL---WKRPAFALEVIAPASEKQIARSRPQPGVFVTETAALYHAAVAPYIDAL--DPKSTSWIDKCLDLSKEAERVLFNDPAEPTGFLLNVDTKWKSHPPCTADPQLRASWRGHTAVKDLYCLAICHRRDIRSLRDLTAEHLPLLRRILDQGVRTLCETYGVEPHDLRVFVHYQPQFYHFHVHFTRLHNDLGCQAERAHLLQEVIDSLEA----DGACYAQKKTLYYQLKANDRLLARLREEGS 350
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1508.3822.1 vs. uniprot
Match: W7TMI8_9STRA (Histidine triad protein member n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMI8_9STRA)

HSP 1 Score: 262 bits (669), Expect = 6.300e-75
Identity = 148/355 (41.69%), Postives = 212/355 (59.72%), Query Frame = 2 
Query:  326 LRDFQSEEVLKDE----DDGRVVTLLGRFAWQKEGEVALVKLIATPL-------------SFKGLRKN--------------LRRLTVGLKSESGAEYAFYDCSMSLWQTFVCGLQGNSYSLEVVAPASERTVNRNRPVTTVMLTETAAMFASVTAPHIEEVVGDGKSLSWLYNVLSKQKEADRVLYEDE----DPEYGFLLNVDTKWRTHPDVSAVPREEWHGHPSVAELYCLAICHRRDIRTLRDVRAEHVPMLKEMYRRGIETIEAVYGVPEEQLRVFVHYMPQFYHFHVHFTRVHNTIGVEAERAHLLLDVIQNAETAPANGGGSYYETRTMQFRVRENDALHQAFKDAAS 1285
            LRDF  EEVL DE     DG  V LLGRF WQ   E A++K+    L             + KG+ KN              L  L++ ++ ESGAEY +Y  S+S       G+   +Y +EV+APAS R + R      V++ E+ A++     P  +EV G+G+SL W+YN+L  +KEA+R+++ED     D   GF+L  D KW++HPD S  P+EEW  HPS + L CLAI H R I +LRD+R  H+P+L+ +  +G+  IEAVYGV +E++RVFVHY+PQF+HFHVHF+R++   G+E ERAHLL DVI+  E AP   G  YYE  ++ + V++++ L+   + A +
Sbjct:   42 LRDFIMEEVLTDEVTPSPDGYTV-LLGRFTWQGRDEKAILKMRPEQLPARDNAVTREHSHTGKGILKNGFWVSCKRQSLHRALSHLSLRVQLESGAEYGYYSGSLSPLSMAYLGIP-LTYHIEVIAPASPRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYGVGKEEVRVFVHYVPQFFHFHVHFSRLNLAHGIEVERAHLLSDVIEKIERAPV--GEEYYENASISYTVKKSEELYGRLQKAGA 392
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1508.3822.1 vs. uniprot
Match: A0A7S4D8L5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8L5_HETAK)

HSP 1 Score: 245 bits (625), Expect = 1.780e-69
Identity = 134/340 (39.41%), Postives = 198/340 (58.24%), Query Frame = 2 
Query:  302 SRLAGIRSLRDFQSEEVLKDEDDGRVVTLLGRFAWQKEGEVALVKLIATPLSFKGLRKNLRRLTVGLKSESGAEYAFYDCSMSLWQTFVCGLQGNSYSLEVVAPASERTVNRNRPVTTVMLTETAAMFASVTAPHIEEVVGDGKSLSWLYNVLSKQKEADRVLYED--EDPEYGFLLNVDTKWRTHPDVSAVPREEWHGHPSVAELYCLAICHRRDIRTLRDVR-AEHVPMLKEMYRRGIETIEAVYGVPE-----------------EQLRVFVHYMPQFYHFHVHFTRVHNTIGVEAERAHLLLDVIQNAETAPANGGGSYYETRTMQFRVRENDALH 1261
            S L  ++ L  FQ EEVL D ++G+ V L G       G+ A++K  +   + + L  NL    + L SESGAEYA++  ++      V   Q  SY LE++ PAS+R + R+  V  +++ ET+  +A++T P+I+ V+GDG SL W+YN+L K+KE +R++Y+     PE  F++N+DTKW+THPD    PRE+W       ++YCL I   R +++LRD+R A H+P+L+ +   G+  + A+Y +P                   QLRVFVHY PQFYHFHVH+    N +G   +RAHLL DVIQN E  P      +Y TRT+  R++  D LH
Sbjct:    1 SILKQLKHLSGFQFEEVLTDNNNGQFVVLKGIL----NGKPAVLKFNSLHATAEQLLSNLCSAKLDLHSESGAEYAYFHATI---HNGVSKKQNPSYHLEIICPASDRQIRRSTTVPLILVDETSKDYANITLPYIQSVIGDGGSLQWVYNILDKKKEVERIVYDTGGTGPE-DFIINIDTKWKTHPDPKETPREKWKDLVKPEDIYCLGIVQLRGLKSLRDLRGAAHLPLLRRLAGEGLSQVAALYSLPRGPGGXXXXXXXXXARLRRQLRVFVHYQPQFYHFHVHYVHAANDLGATCDRAHLLTDVIQNLELDP-----DFYTTRTITHRLQVTDQLH 327
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1508.3822.1 vs. uniprot
Match: A0A7S2XNU1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNU1_9STRA)

HSP 1 Score: 235 bits (600), Expect = 5.950e-66
Identity = 120/273 (43.96%), Postives = 170/273 (62.27%), Query Frame = 2 
Query:  500 LKSESGAEYAFYDC---------SMSLWQTF--VCGLQGNSYSLEVVAPASERTVNRNRPV-TTVMLTETAAMFASVTAPHIEEVVGDGKSLSWLYNVLSKQKEADRVLYEDEDPEYGFLLNVDTKWRTHPDVSAVPREEWHGHPSVAELYCLAICHRRDIRTLRDVRAEHVPMLKEMYRRGIETIEAVYGVPEEQLRVFVHYMPQFYHFHVHFTRVHNTIGVEAERAHLLLDVIQNAETAPANGGGSYYETRTMQFRVRENDALHQAFKDAA 1282
            L SESGAEY++Y+           +    TF      QG  + +E+++PA+ R + R  P  +T ++ ET  M+ +VT P I  +  +G SLSW+ NV+  +KE +R+L   +D    F+LNVDTKWR+HPD  + PR EW+ HP+ A+LYCL I  +  +RTLRD+R EHVPMLK M + G + I+ +YG+   Q+RVFVHY PQFYHFHVHFTR+ N +G   ER HL+ D++QN           YY+ RT+ FR+R  D L++   +AA
Sbjct:   69 LTSESGAEYSYYEALPTPIFSEGQVERTPTFPGASSTQGG-FKMEMISPATYRQIARAMPAPSTALVNETPEMYQTVTEPFIASIC-EGNSLSWICNVVDAKKEVERLLVNHKD----FVLNVDTKWRSHPDALSTPRSEWYQHPATADLYCLGIVKQSGLRTLRDLRGEHVPMLKAMMQEGTKAIQTIYGIESNQIRVFVHYQPQFYHFHVHFTRLENEVGCSVERGHLVSDIVQNLGM-----DSDYYKKRTISFRLRTTDTLYKQLAEAA 330
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1508.3822.1 vs. uniprot
Match: A0A7S2HS95_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2HS95_9EUKA)

HSP 1 Score: 230 bits (586), Expect = 1.620e-65
Identity = 116/238 (48.74%), Postives = 155/238 (65.13%), Query Frame = 2 
Query:  521 EYAFYDCSMSLWQTFVCGLQGNSYSLEVVAPASERTVNRNRPVTTVMLTETAAMFASVTAPHIEEVVGDGKSLSWLYNVLSKQKEADRVLYEDEDPEYGFLLNVDTKWRTHPDV--SAVPREEWHGHPSVAELYCLAICHRRDIRTLRDVRAEHVPMLKEMYRRGIETIEAVYGVPEEQLRVFVHYMPQFYHFHVHFTRVHNTIGVEAERAHLLLDVIQNAETAPANGGGSYYETRTM 1228
            EYA+YD   SL    +      +Y+LEV+APASE+ + R+RP   V + ETAA++ +V  P IE +  D  + +W+  VL   KE +RVL+ D +PE GFLLNVDTKW++HP        R  W GH SV +LYCLAI HR D+R+LRD+R  H+P+LK +  RG ETI  VYGV   + RVFVHY PQFYH HVHFTR+HN +G + ERAHLL ++I   E       G+ Y+++T+
Sbjct:    1 EYAYYDAVSSLRHLLINRRLRPAYALEVIAPASEKQIARSRPQAGVFVVETAAVYNAVVRPFIESL--DPAATAWIRKVLDLSKEKERVLFNDTNPETGFLLNVDTKWKSHPPCVEDVAQRAAWRGHESVKDLYCLAIVHRSDLRSLRDLRESHLPLLKHILLRGTETIRNVYGVQPAECRVFVHYQPQFYHLHVHFTRLHNDLGCQVERAHLLHEIIDTLEA-----DGAAYKSKTL 231
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1508.3822.1 vs. uniprot
Match: C1MPA0_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MPA0_MICPC)

HSP 1 Score: 234 bits (596), Expect = 1.740e-65
Identity = 137/344 (39.83%), Postives = 193/344 (56.10%), Query Frame = 2 
Query:  272 IAAGREDRSTSRLAGIRSLRDFQSEEVLKDEDDGRVVTLLGRFAWQKEGEVALVKLIATPLSFKGLRKNLRRLTVGLKSE-SGAEYAFYDCSMSLWQTFVCGLQGN--------SYSLEVVAPASERTVNRNRPVTTVMLTETAAMFASVTAPHIEEVVGDGKSLSWLYNVLSKQKEADRVLYEDEDPEYGFLLNVDTKWRTHPDVSAVPREEWHGHPSVAELYCLAICHRRDIRTLRDVRAEHVPMLKEMYRRGIETIEAVYGVPEEQLRVFVHYMPQFYHFHVHFTRVHNTIGVEAERAHLLLDVIQNAETAPANGGGSYYETRTMQFRVRENDALHQAFKD 1276
            +A+   D    RL    SLR F++  VL D  +  VV LLG F       V  VKL   P+    L      +T+  ++  SG EY +Y   ++    F  GL  +        + S E  A    + V+RN     V+  E    +A+   P+I+ +     ++ W+Y +L+K+KE +R+L++D+D   GFL+N D KW THPD  A P+E+W  HP   ELYCL +CHR+D+R+LRD+RA H+PML+ M R+G E I+  YG+ +E LR+FVHY PQFYHFHVHFT V    GV AERAHLL DVI+N E         +Y   ++  R+ END L + FK+
Sbjct:    1 MASSLHDAMPDRLP---SLRGFKTSRVLNDGKESGVVALLGTFPGCDTESV--VKLSRPPIPLGDLDGLATAVTLSERAPYSGMEYGYYHGVVA--SEFAPGLSVDVLYPGCLANESEEARAKLLAKHVSRNASQAPVVFRENPRAYAAAHLPYIDAI--PSSAIGWVYKILNKEKELERLLFDDDDANDGFLVNTDPKWVTHPDPKATPKEQWMNHPGTRELYCLGLCHRKDVRSLRDLRAAHLPMLRAMARKGREVIKNTYGLADESLRIFVHYPPQFYHFHVHFTNVSVDHGVSAERAHLLDDVIENIER-----DSEHYAKCSITCRMGENDELWRRFKE 330
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1508.3822.1 vs. uniprot
Match: K8EMC5_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EMC5_9CHLO)

HSP 1 Score: 232 bits (592), Expect = 1.090e-64
Identity = 132/339 (38.94%), Postives = 195/339 (57.52%), Query Frame = 2 
Query:  317 IRSLRDFQSEEVLKDEDD----GRVVTLLGRFAW---QKEGEVALVKLIATPLSFKGLRKNLRRLTVGLKSE-SGAEYAFY-----DCSMSLWQTFVC------GLQGNSYSLEVVAPASERTVNRNRPVTTVMLTETAAMFASVTAPHIEEVVGDGKSLSWLYNVLSKQKEADRVLYEDEDPEYGFLLNVDTKWRTHPDVSAVPREEWHGHPSVAELYCLAICHRRDIRTLRDVRAEHVPMLKEMYRRGIETIEAVYGVPEEQLRVFVHYMPQFYHFHVHFTRVHNTIGVEAERAHLLLDVIQNAETAPANGGGSYYETRTMQFRVRENDALHQAFKD 1276
            +++LR F+  ++L D  D    G VV LLG F     ++E E  ++KL   P+    L +    +T+  +   SG EY +Y     + S + +  +V       G   +  S E  A    + ++RN+    V+  E    + +   P+IE +     ++ W++ +L+K+KE +R+L++D+D   GFLLN D KW THPD    P+E+W  HPS  ELYCL +CHR+D+R+LRD+RA H+PML+ M ++G E I+  YG+  E LR+FVHY PQFYHFHVHFT V    GV AERAHLL DVI+N E         +Y  R++  R+ END L + FK+
Sbjct:   10 LQTLRGFKVSKILNDGKDSSSFGNVVALLGTFPGLMEEEEEESVVLKLSRPPIPLDDLDQLADAITLYERMPYSGMEYGYYHGVVNNSSETFFAPYVSVDVLYPGCLKDE-SKEAKAKLLAKHISRNQAQRPVIFRENPKTYENAHLPYIEAI--PSSAIGWVHKILNKEKELERLLFDDDDVNDGFLLNTDPKWTTHPDPKTTPKEQWMNHPSTRELYCLGLCHRKDVRSLRDLRAAHLPMLRAMAKKGREVIKNTYGLANESLRIFVHYPPQFYHFHVHFTNVSVEHGVSAERAHLLDDVIENIER-----DSEHYAKRSITCRMGENDELWRRFKE 340
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1508.3822.1 vs. uniprot
Match: A0A7S0AGM9_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AGM9_9STRA)

HSP 1 Score: 217 bits (553), Expect = 8.650e-61
Identity = 103/234 (44.02%), Postives = 152/234 (64.96%), Query Frame = 2 
Query:  578 QGNSYSLEVVAPASERTVNRNRPVT-TVMLTETAAMFASVTAPHIEEVVGDGKSLSWLYNVLSKQKEADRVLYEDEDPEYGFLLNVDTKWRTHPDVSAVPREEWHGHPSVAELYCLAICHRRDIRTLRDVRAEHVPMLKEMYRRGIETIEAVYGVPEEQLRVFVHYMPQFYHFHVHFTRVHNTIGVEAERAHLLLDVIQNAETAPANGGGSYYETRTMQFRVRENDALHQAFKD 1276
            +  S+++E ++PAS+R + R  P   TV++ ETA ++ +V  PHI+ +V  G SLSW+ N++   KEA+R++ + +D    +++N+DTKWR+HPD +  PREEW  H S A+LYCL I     +  +RD++ EHVP LK M   GI  IE  YGVP +Q+R + HY+PQF HFHVH+TR+ N IG + ER HL+ D+IQN E  P      YY  RT+ +++R  D L++   D
Sbjct:    4 KAGSFTVEFISPASDRQIQRASPSPRTVLVEETAELYDAVVKPHIQAIVAGG-SLSWVKNIVDGTKEAERLILDTDD----YIVNIDTKWRSHPDPNTTPREEWLHHSSTADLYCLGIFKADGVACMRDLKVEHVPTLKSMVDEGIAAIERTYGVPRDQIRCYCHYLPQFMHFHVHYTRLENEIGCQVERGHLVSDIIQNLEMDP-----DYYSKRTITYKLRVTDELYRKIHD 227
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1508.3822.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KL44_9PHAE3.540e-18376.62Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0M0JXI4_9EUKA5.180e-8750.00Scavenger mRNA-decapping enzyme n=1 Tax=Chrysochro... [more]
A0A7S3SDN6_EMIHU6.610e-8246.99Hypothetical protein n=2 Tax=Emiliania huxleyi Tax... [more]
W7TMI8_9STRA6.300e-7541.69Histidine triad protein member n=2 Tax=Monodopsida... [more]
A0A7S4D8L5_HETAK1.780e-6939.41Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XNU1_9STRA5.950e-6643.96Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2HS95_9EUKA1.620e-6548.74Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
C1MPA0_MICPC1.740e-6539.83Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
K8EMC5_9CHLO1.090e-6438.94Uncharacterized protein n=1 Tax=Bathycoccus prasin... [more]
A0A7S0AGM9_9STRA8.650e-6144.02Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1508contigH-canaliculatus_F_contig1508:18055..25156 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score563.1
Seed ortholog evalue9.6e-158
Seed eggNOG ortholog2880.D8LCA8
Preferred nameDCPS
KEGG rclassRC00002
KEGG koko:K01301,ko:K03494,ko:K12584,ko:K12860
KEGG ReactionR04368,R06153
KEGG Pathwayko00601,ko01100,ko03018,ko03040,map00601,map01100,map03018,map03040
KEGG ModuleM00353,M00355
GOsGO:0000288,GO:0000290,GO:0000291,GO:0000339,GO:0000340,GO:0000375,GO:0000377,GO:0000398,GO:0000932,GO:0000956,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004779,GO:0004780,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006163,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006725,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0008380,GO:0009056,GO:0009057,GO:0009117,GO:0009150,GO:0009259,GO:0009266,GO:0009267,GO:0009408,GO:0009605,GO:0009628,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010033,GO:0010467,GO:0010468,GO:0010604,GO:0010605,GO:0010629,GO:0010941,GO:0016070,GO:0016071,GO:0016462,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016819,GO:0019219,GO:0019222,GO:0019439,GO:0019637,GO:0019693,GO:0030234,GO:0031086,GO:0031323,GO:0031325,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032069,GO:0032075,GO:0032991,GO:0033554,GO:0034641,GO:0034655,GO:0035690,GO:0035770,GO:0036245,GO:0036464,GO:0042221,GO:0042493,GO:0042594,GO:0043067,GO:0043069,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043928,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044692,GO:0045292,GO:0045935,GO:0046483,GO:0046700,GO:0047627,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050072,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051336,GO:0051345,GO:0051716,GO:0055086,GO:0060255,GO:0060548,GO:0060700,GO:0065007,GO:0065009,GO:0070013,GO:0070566,GO:0070887,GO:0071310,GO:0071496,GO:0071704,GO:0072521,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0098772,GO:0140098,GO:1901135,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901575,GO:1901654,GO:1901655,GO:1901700,GO:1901701,GO:1901917,GO:1901919,GO:1905777,GO:1905779,GO:1990904
EggNOG free text desc.m7G(5')pppN diphosphatase activity
EggNOG OGsCOG5075@1,KOG3969@2759
EC2.4.99.4,3.4.17.21,3.6.1.59
COG Functional cat.M
CAZyGT29
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko01003,ko03019,ko03041,ko03400
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionHIT-like domain
Ec32 orthologEc-14_005450.1
Exons7
Model size3065
Cds size1143
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929250.1087785-UTR-H-canaliculatus_F_contig1508:18054..182441622929250.1087785-UTR-H-canaliculatus_F_contig1508:18054..18244Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1508 18055..18244 +
1696845735.95734-UTR-H-canaliculatus_F_contig1508:18054..182441696845735.95734-UTR-H-canaliculatus_F_contig1508:18054..18244Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1508 18055..18244 +
1622929250.3122785-UTR-H-canaliculatus_F_contig1508:23424..251561622929250.3122785-UTR-H-canaliculatus_F_contig1508:23424..25156Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1508 23425..25156 +
1696845736.0522954-UTR-H-canaliculatus_F_contig1508:23424..251561696845736.0522954-UTR-H-canaliculatus_F_contig1508:23424..25156Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1508 23425..25156 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929250.148372-CDS-H-canaliculatus_F_contig1508:18244..184181622929250.148372-CDS-H-canaliculatus_F_contig1508:18244..18418Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1508 18245..18418 +
1696845735.9694808-CDS-H-canaliculatus_F_contig1508:18244..184181696845735.9694808-CDS-H-canaliculatus_F_contig1508:18244..18418Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1508 18245..18418 +
1622929250.1651087-CDS-H-canaliculatus_F_contig1508:19514..196141622929250.1651087-CDS-H-canaliculatus_F_contig1508:19514..19614Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1508 19515..19614 +
1696845735.97908-CDS-H-canaliculatus_F_contig1508:19514..196141696845735.97908-CDS-H-canaliculatus_F_contig1508:19514..19614Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1508 19515..19614 +
1622929250.1864738-CDS-H-canaliculatus_F_contig1508:20406..205231622929250.1864738-CDS-H-canaliculatus_F_contig1508:20406..20523Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1508 20407..20523 +
1696845735.9905007-CDS-H-canaliculatus_F_contig1508:20406..205231696845735.9905007-CDS-H-canaliculatus_F_contig1508:20406..20523Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1508 20407..20523 +
1622929250.2031147-CDS-H-canaliculatus_F_contig1508:21156..213831622929250.2031147-CDS-H-canaliculatus_F_contig1508:21156..21383Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1508 21157..21383 +
1696845736.0005698-CDS-H-canaliculatus_F_contig1508:21156..213831696845736.0005698-CDS-H-canaliculatus_F_contig1508:21156..21383Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1508 21157..21383 +
1622929250.2185721-CDS-H-canaliculatus_F_contig1508:21668..218621622929250.2185721-CDS-H-canaliculatus_F_contig1508:21668..21862Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1508 21669..21862 +
1696845736.011049-CDS-H-canaliculatus_F_contig1508:21668..218621696845736.011049-CDS-H-canaliculatus_F_contig1508:21668..21862Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1508 21669..21862 +
1622929250.2625995-CDS-H-canaliculatus_F_contig1508:22427..225351622929250.2625995-CDS-H-canaliculatus_F_contig1508:22427..22535Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1508 22428..22535 +
1696845736.0273914-CDS-H-canaliculatus_F_contig1508:22427..225351696845736.0273914-CDS-H-canaliculatus_F_contig1508:22427..22535Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1508 22428..22535 +
1622929250.2966049-CDS-H-canaliculatus_F_contig1508:23201..234241622929250.2966049-CDS-H-canaliculatus_F_contig1508:23201..23424Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1508 23202..23424 +
1696845736.040162-CDS-H-canaliculatus_F_contig1508:23201..234241696845736.040162-CDS-H-canaliculatus_F_contig1508:23201..23424Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1508 23202..23424 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1508.3822.1prot_H-canaliculatus_F_contig1508.3822.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1508 18245..23424 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1508.3822.1

>prot_H-canaliculatus_F_contig1508.3822.1 ID=prot_H-canaliculatus_F_contig1508.3822.1|Name=mRNA_H-canaliculatus_F_contig1508.3822.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=381bp
MWEVSSLGVYEAGVGLLTVGLAVACWFIAAGREDRSTSRLAGIRSLRDFQ
SEEVLKDEDDGRVVTLLGRFAWQKEGEVALVKLIATPLSFKGLRKNLRRL
TVGLKSESGAEYAFYDCSMSLWQTFVCGLQGNSYSLEVVAPASERTVNRN
RPVTTVMLTETAAMFASVTAPHIEEVVGDGKSLSWLYNVLSKQKEADRVL
YEDEDPEYGFLLNVDTKWRTHPDVSAVPREEWHGHPSVAELYCLAICHRR
DIRTLRDVRAEHVPMLKEMYRRGIETIEAVYGVPEEQLRVFVHYMPQFYH
FHVHFTRVHNTIGVEAERAHLLLDVIQNAETAPANGGGSYYETRTMQFRV
RENDALHQAFKDAASTPQPLPRPRPRPGRT*
back to top

mRNA from alignment at H-canaliculatus_F_contig1508:18055..25156+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1508.3822.1 ID=mRNA_H-canaliculatus_F_contig1508.3822.1|Name=mRNA_H-canaliculatus_F_contig1508.3822.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=7102bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1508:18055..25156+ (Hapterophycus canaliculatus Oshoro5f female)
GTCTGAAGAAGGGAGACTCGCACAGTATCCTGACGGCGCGCACACACAGA
TCTATATCATCCACGGCAGGACCCTCCCTCTTGCAACAGGACCGACGATC
CATCACGAGATTGATCTCGTCTCAAAGAGCAAGATTTTAGACCCGACCCT
GCGCTCTATCGTACCTCTCTCGTCAATCCGGTCGCTCGGAATGTGGGAGG
TGTCTTCTCTGGGTGTTTACGAGGCCGGTGTCGGCCTCCTCACCGTCGGA
TTGGCCGTAGCATGCTGGTTCATCGCAGCTGGGAGAGAGGACCGGAGCAC
ATCCCGTCTGGCTGGCATTCGGTCTCTTCGGGACTTCCAATCGGAGGAGG
TCTTGAAGGATGAGGTGGGTTCATCGTCATCCATTCTTCCGCTTTTTCAA
ACACAAGATCTTAAACGCGGGAATCATGTTTTGTTTTTCAAACATGCGAC
GCTCGGGATCCACTCAAAGTGGGTCAACGGATGCGCGTGCCCCTCTTCTC
TACACAACTTTGCTGCTGCGCAGCGAACGCGATGGGAGCGATGAGGGGCT
GAGGCGCTCAACCAGAAAAGCGGTCGAGTTTTGGGGTATGGCATTAGCGA
GGCGGAGCTCTCGTTCTGCCGGTTTGGGCAAGAGTTGATTCGTTCGGTGC
CCCCGGGTGGAAAGCTTTAGCCAATCCGCAGCGGTAGTTCTGCAGCGTCC
TCGAGCGGTGTTGTTCGGTAAAGCGCATGCGCTGGCGCGGTTCAGGCTCG
CAGCTTATTTAGACCTCGCCTGGGTGTAGCTCTGTTTCTATGCACATGAA
TCCAGCAAGAACACAATACTTGTACCAGCGAGTAGTAGCCGACAGCCCGG
TCCACCAGTCACTTCGAGACCGGCTGGATGGCCTTGTGATCCTCGCGGGA
AGGTGCTGCCGTCGCATGCACGTGCGCACAAGAGCGACCACAGGACTAGC
GAACACGTGCACGCAAGGGCGTGTACAAAGACGTTCCTTCTCCCTTCACT
TGCTGGCGCGACGGGGCATTTGTCGACTGCGCCGGCGTTTGCAAGATGTG
CGATTAAATTTTCCATTAATGGAGAAGAACCGAATCGCGCTCCACTTAAC
ACTCATAATCCGGAACAGTTTCCAACGAAGCACGCCTGGCTTGGGACAGT
TCGTTCTGAAAACAGGACACGGAGTAAGTGCTGAGCGCCTCCGCGGGTTG
GCTGTCCTTTGCCTTGCCTCATCTTTCTGGGCCCATTGACTTGTTTGGAA
CAGAGAAAAGCATCAGTATGTTCCAGTCTCGTTGGGAAAATTGTGCACGG
GGACAAGTGACCTCGCCACAAGCGCGCATCCCCTCTGCTGAAATATAAAA
TCTCGGGACGATTCGGAGAAACACCTCTCCTCGGAACAAAATCTGAAGTA
CGCAATCGACGTACTCCCCCTTCTGGCCCTGTGCGCTTCTTGCTCCGATT
CTTTGACAAGGACGACGGCAGGGTGGTGACTCTTCTCGGCCGCTTCGCGT
GGCAAAAGGAAGGCGAGGTGGCCCTCGTCAAGCTCATCGCCACCCCTCTG
TCGTTCAAGGGTGAGTCGTACGCAGTTACGCTTATCCTCATCGATCTTTC
TCTTAAAAGCTACGCACGAGGTGCGTGCACTTAACGCGAGACAGAGCTGA
TACCGGTACTTTCTTGCGCAGTCCATGTCTCGACGTCAACAGATATATTC
GCCTCGGCGCAAGCGGCGCTCGCTCAGAAGGTGGGCGTTTCACAGGGGGT
GGCTTGTCGGGTGCAGCAGCGAACAAAAGGAGAGGAGAGGGCGTTTGTTT
TGTCTACAAATGCCGGAGAAGTTCGAGTCTTTCAGACCCGGTGGACGATT
TACAGGCGGTGGTTTGTCCGGTACTCCGTAGCGAACGAAAGGAAACAAGA
GGGGGCTGTTTTGTCCACAAATGCCGGAGAAAGTTTTCTTGAAGTCTTGA
GACCCGGTCGGTCTCTTCTGCAGCCGGCCGGCGAATCCCTTGCCGTTGTA
CTCTTGGTGAGCTCGTGTCTACCCACGTACCTCCCGCTGGGAGACGACGC
GTGAACAGAGCTCACCGTAGCCCCATCGATAATGCCTCTCCAGGCCGGGC
CGTCTGTGCGTGTCTGCTTTCTTGGTTTGCGAACCCCGACTTGCTGTCTC
GGCACGCTTTCCTGCCCTGTTTATCTCTGGCCGCGCATATGGATCAACAT
AAGCCCCGACGTCGCGGTACGTCTGCGAGCCCACCTACTCCTCCACCCCA
CGGTTGTGCGTACAAAAGGCTGCCTGCTTGTCTGCGTCGCTTGTTTTGAC
ATCGACACGCCGTGCGCACCACCACCGCCCGCTATCGCGACTTTGTCCGC
AGGATTGCGGAAGAACCTACGCCGGTTGACTGTCGGGCTGAAAAGTGAAA
GCGGGGCAGAGTATGCCTTTTATGATTGCTCCATGTCGCTGTGGCAAACC
TTCGTGTGCGGCCTCCAAGGTGATTGCCACGTGCTCGATGCTTACCGTGA
GTCTGCATACCTCTTCTCACGCGTGTTATTCCGGCGCCGCCCGTTGTCGC
AAGCTCCCCACGTTGGTTAGCGCGTCGAGCGTTAAATTTCGTGTGTAGCG
GGCAGCCTCTCGCACGCACGGCGTAGTTCGGCAACGGCCCGACTTTACGG
AAGACACGGAGGGTGCGAGGGTGGATGCTGCCACAACGCACGACTAGCAC
AGATTACGCTCTCGGCGCTGTGTGTGTTTTCTGAACCAGATCAAACCGCT
CTCTGCCTCAAGATCAACGATGCCTATTATCTGCTTTGTGTGGCTGTGAG
CGGCTAATTAATGCAACGCGCCCATCGGGACATCGGTGGCACTCTCCTGG
CCGTTCCAACCGCTATCCGCCACCGTCGTCTGCGCTGATTTTTGTTGCCA
CACGCCCGGCACGGAAGCGAGCAATTTCCTCCTTAATTAATGACCACGAG
GTAGTCCGTTCCTCGGTGCTTTGAAGCTCACTCCGCCCTCTCGACGCCCC
GCAAACGCCAGCAGCTCCGCCGACCGCGCCGTCCAAACTTCGGGAGCTCA
AAACCACCTCCCACTCCCCCCGGCCTCTTCTTCCGCTCTTGCCCGTCACC
AGGCAATAGCTACTCCCTCGAGGTTGTCGCGCCGGCCTCGGAGCGCACGG
TGAACCGAAATCGTCCCGTCACGACGGTGATGCTGACAGAAACTGCCGCG
ATGTTCGCCTCGGTGACGGCCCCGCACATCGAAGAGGTGGTGGGCGACGG
GAAGTCTCTGTCGTGGCTGTACAACGTGCTCTCCAAGCAGAAGGAGGCGG
ACCGCGTGCTCTACGAGGACGAGGATCCCGTGAGTGGGGACGTGGTGGTG
TTGCCATGGGAGGCGGCGTGGCGATCTTTCCGTGGCGACGTTGGGGGGTC
CGTGTGTGTAATGATGCGGACGCCGCAGATTTTCCGGTCTGAAGCAGTAG
GAGCGATGATAGTGCCGCCAACCGTGCCTGCCCCCCCCCCCCTCCGCCCA
TATTTTTTATCTTGCTTTCGGCCCTGCATGTTTTCCGTTGGCGTCTCCCC
TCGACCCTACGCACCTCCGCCCCGTTTTTCGCATATCTCGCGCCACGCGT
CATCAAAACGCCAGGAGTACGGGTTCTTGCTCAACGTGGACACCAAGTGG
CGAACGCACCCCGATGTCTCCGCCGTGCCTCGGGAAGAGTGGCACGGGCA
CCCCAGCGTCGCCGAGCTCTACTGCCTGGCCATCTGCCACAGGCGGGACA
TCCGAACGCTGAGGGACGTTCGCGCGGAGCATGTCCCCATGCTCAAGGAG
ATGTACCGGTAGGACGCTTGGTTGTCGCCGCTGATCCTGCTCTAGGTTCG
AAACCCTGCGTTGCTGTGATGGGTCTCTCATGTTTTCTCTCTGTTCCGGT
TTCGTTGGCTTTCAAGGTCTGGGTCGTTGCGCGTTGCAAGGGTGGCTTCC
ACACGTAAGTGGTCATACAGACAGGGTTTGACTGATGGCATTGATCTCCC
GGCCGCGTGCATGTGTCACGAGAGGTGCGAGTGAAGGGGGTGCCCATGCA
ATTGTGAACGTTTGCCCCCGTTCTCACGAATTCTTTTTTTCAGGGGACGC
CTGTGGCGATTCGGTCGCGATTGGAATGGTGTTGCCAATTGTTCTCGCTC
CGTTTTCCTTGTTTTAGAGCAGTGCGACGCCGCCGGAGTTGCCGTTCCAA
ACTGGCTTTGGTTTTGGTTTCGGCACGTGCGGATAGATGCCGCGCAACGC
TGAGCTCGGCGTCACTTCCTCGGCACTGGTATTGGAGATCGCACCACAAC
GCAAGTCTGCCAGCCTTCTGCCTCCACGCCCCAACTTAACTGTAAACCTT
GATGCAACAACCCTTTTTCCCAGGCGTGGAATTGAAACCATCGAGGCGGT
TTATGGAGTGCCTGAGGAGCAATTGAGAGTGTTCGTCCACTACATGCCGC
AGTTTTACCACTTTCACGTACACTTCACCAGGTGAGCTGAAACGCCATGA
CCACACGCTTTTGTACTCTAATCCTTGGACGCATGAAATCTGCCCCCTGT
GCTTCACACCCATGGTGGAAACCCGAGACGCTTCCGTGTGTTTTTGTGTA
CGCGCGCGCGCCTGCGGGAGCGCCGGAAGTGTTGGCATCCACCGCGCCAC
GACACCCTGACGAACCAAGCGACGTCAATTTTAGCCAAAACGAAGAACGA
AAACGCCTCGCCTTGTGCGCATACATTAGAAGCCCTCTCTCCACAGCAGA
GGCCGCTCTTGTTGGCGGGCTAATCAAAAAGGTGCAGGAGGGTACGACCA
ACTGCCGCCTTGGCTAGGTGTGTTTCTGGTCGCGCCTACGAAATGCACCG
CTCCAACGAGTTGTGCTCGGAGAAATGCGCGCGAGGCCTTGTGAACAGGC
CATTCACGACCACGGGTCCCCCGTTTCCCACGGAACAGAAAGCCTCGGTA
CAAGAACCTCATTTTCCATCCAATTCCGTGGCGCTGGCCTGGCCTGTCAA
TTGGATCGATGTTCCTATTTCATCTCTGTTCTGTCCGTCCGGTGTCCTTG
TCCTTGTCCTCGTCCTTGTCCTTGTCCTTGTCCTTCCTGTCACGTATCTT
GCGTCCTCCGTCCTCCTCCTCTGCTGCTGCTGCTTCTGTCTCCGCAGGGT
GCACAACACGATAGGCGTCGAGGCCGAGCGGGCCCACCTGCTGCTGGACG
TAATCCAGAACGCCGAGACGGCGCCGGCGAACGGCGGGGGCTCCTACTAC
GAGACCCGCACGATGCAATTCAGGGTCCGCGAGAACGACGCTCTGCACCA
AGCTTTCAAGGACGCGGCCTCGACCCCTCAGCCCCTTCCTCGTCCCCGCC
CCCGGCCCGGACGCACGTGAAGGCGTCGACGGTGCGCCACACGCAAAATA
CGGTGTGGTGCGGCTGCTCGCGGAGACGTCTCAGGCGCGGTGGTTCCGGG
GTTGCTCTTGTTTTTTGGCCCAGGCGGCGAAGTCTTTTCTTGTGCCCGGG
GTGGGGACGGGCCCGGTGAGCTCCTCTTTCATCTGCTAGCCTATCGACTC
ATAAGCGTTAAGCCTGCCGCTCTTTGTGCGCGCTTCTTCTCCGTTTTAGA
GGTTTCGCCGGCGGCATCGATTAGTGTCTGCGCATGTGTTCGTCCCTGTT
AAGCTTACGGTTGCGTCTTCTACGCTTGTGCATTTATTTTTGCATCGAGG
TCGAAGGCTCAGCGAGGTAGGAAGGACGTTGCAGAAGGCGGCGATGGCAT
GTGTCTGTGGTGTGGGAGTATCTGGTTCGCCATCCTCCTTGACTCGCCAT
CACCCCTACACTTGGCCCGTCACGAGCTACCATGAATAGCACCACGATGG
AGCGCTTTGGATCAGCGGCAACGCGCACATTCGTCCTTCAGTACAAAAAT
TCCTTGCTCTGGCTTCTGGTTTGCCTGCGGTTCAAGGTTGTGCGGGTGGC
GTCTGATTTCCGGGCGGTGGAGAAAATGGCTAAGGATGAAAAAGCTAATT
CTCCGTTCCGTTGTTGCTCCTCAACCAAAGCGTATGTTCCTGGCTTGTTG
CCTAACGACAAAGCGCAACGCGAGTAAAAAAGAGCGTAGGAATTCCCGTA
CTTGATGTTGTGGGTGAAGTTTCGGGTGGAGGTACTGTCGTTGAAAAGGG
TGGGGGTCAAGGGTCAAGAATGACAAACGCACAAGGCGTGTAGGGTAGCG
GCGCACGAAGTCGTGTGTTTCAGGGAAATGGCAGCACAGACGAGGGACTC
CTTTCGAACGGGGTGGTCAGAAGTCTTGCCAGGCACTGCGGAAAGATGTG
CTTCACCGCTGCCCTACCTGTCAGACCTGATGGGCTGGCTAGCGGTGAAT
CATTTTTCTCCGCAGTTCATGGTTAGAGTCCATCAGGCGTTGCGCACGAA
GTTGAGCAAAAACCTAAGGTGCTTTCGGCACTGAAATGATCGGTGGGACG
AAGCACTAGGTTTTTGATGGTTGTGGCATGACGAGGTGTGGAGTGCTTGT
TTTGTTCCTCGCGCAGGAACCGGGACTCGTATGATCTACCATGAGGTGTG
TTTTGCAAAAAAAAATGTCGTTATTTTAGAGCATAAAAGGCGGAGTTGAC
GTTTCGTTCCACGTGGGACATGATCAGGTGGCTGCCTTCCTGGAGACCAT
CCGTTCGAACCGTGGTGCGCACTGTGCCCCGCACTCCTAGGACATGACAC
GTATGCGTATAAGCCAAGAGGCAAACACCCATGGCTACTTAAGTTCCCGC
AGAGCCTGCGGATCTGCCGGCGGATGTACCGCTGTAGCAACACACAGCCT
TGTCGTTGTTTTTGGGTAGACATGTCTTTGCCTGGAGGTAAAAGAGGAAA
ATTAAAAATTGATTGGTTGGGCGCGTGGGCGTCGACCGAATAACTTACCA
CGACACGCGTATCAGCAGTTGGCAGAAATTCCTAGCTGAATTTATGGTCG
CGTGACGATACGCACGAGTGGGCGATTTATGTCCAGATTGCGACGACTGA
GAGAGGAAAGATTGCGAGGACATCCTTGAAGCAGATATTTCCTGACCGTG
CAGTTGGTTCTTCACAGACGTTTTGTGGTCTTCTGGCCATGAACTGTTCC
GT
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1508:18055..25156+

>mRNA_H-canaliculatus_F_contig1508.3822.1 ID=mRNA_H-canaliculatus_F_contig1508.3822.1|Name=mRNA_H-canaliculatus_F_contig1508.3822.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2286bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1508:18055..25156+ (Hapterophycus canaliculatus Oshoro5f female)
ATGTGGGAGGTGTCTTCTCTGGGTGTTTACGAGGCCGGTGTCGGCCTCCT
CACCGTCGGATTGGCCGTAGCATGCTGGTTCATCGCAGCTGGGAGAGAGG
ACCGGAGCACATCCCGTCTGGCTGGCATTCGGTCTCTTCGGGACTTCCAA
TCGGAGGAGGTCTTGAAGGATGAGATGTGGGAGGTGTCTTCTCTGGGTGT
TTACGAGGCCGGTGTCGGCCTCCTCACCGTCGGATTGGCCGTAGCATGCT
GGTTCATCGCAGCTGGGAGAGAGGACCGGAGCACATCCCGTCTGGCTGGC
ATTCGGTCTCTTCGGGACTTCCAATCGGAGGAGGTCTTGAAGGATGAGGA
CGACGGCAGGGTGGTGACTCTTCTCGGCCGCTTCGCGTGGCAAAAGGAAG
GCGAGGTGGCCCTCGTCAAGCTCATCGCCACCCCTCTGTCGTTCAAGGGA
CGACGGCAGGGTGGTGACTCTTCTCGGCCGCTTCGCGTGGCAAAAGGAAG
GCGAGGTGGCCCTCGTCAAGCTCATCGCCACCCCTCTGTCGTTCAAGGGA
TTGCGGAAGAACCTACGCCGGTTGACTGTCGGGCTGAAAAGTGAAAGCGG
GGCAGAGTATGCCTTTTATGATTGCTCCATGTCGCTGTGGCAAACCTTCG
TGTGCGGCCTCCAAGGATTGCGGAAGAACCTACGCCGGTTGACTGTCGGG
CTGAAAAGTGAAAGCGGGGCAGAGTATGCCTTTTATGATTGCTCCATGTC
GCTGTGGCAAACCTTCGTGTGCGGCCTCCAAGGCAATAGCTACTCCCTCG
AGGTTGTCGCGCCGGCCTCGGAGCGCACGGTGAACCGAAATCGTCCCGTC
ACGACGGTGATGCTGACAGAAACTGCCGCGATGTTCGCCTCGGTGACGGC
CCCGCACATCGAAGAGGTGGTGGGCGACGGGAAGTCTCTGTCGTGGCTGT
ACAACGTGCTCTCCAAGCAGAAGGAGGCGGACCGCGTGCTCTACGAGGAC
GAGGATCCCGCAATAGCTACTCCCTCGAGGTTGTCGCGCCGGCCTCGGAG
CGCACGGTGAACCGAAATCGTCCCGTCACGACGGTGATGCTGACAGAAAC
TGCCGCGATGTTCGCCTCGGTGACGGCCCCGCACATCGAAGAGGTGGTGG
GCGACGGGAAGTCTCTGTCGTGGCTGTACAACGTGCTCTCCAAGCAGAAG
GAGGCGGACCGCGTGCTCTACGAGGACGAGGATCCCGAGTACGGGTTCTT
GCTCAACGTGGACACCAAGTGGCGAACGCACCCCGATGTCTCCGCCGTGC
CTCGGGAAGAGTGGCACGGGCACCCCAGCGTCGCCGAGCTCTACTGCCTG
GCCATCTGCCACAGGCGGGACATCCGAACGCTGAGGGACGTTCGCGCGGA
GCATGTCCCCATGCTCAAGGAGATGTACCGGAGTACGGGTTCTTGCTCAA
CGTGGACACCAAGTGGCGAACGCACCCCGATGTCTCCGCCGTGCCTCGGG
AAGAGTGGCACGGGCACCCCAGCGTCGCCGAGCTCTACTGCCTGGCCATC
TGCCACAGGCGGGACATCCGAACGCTGAGGGACGTTCGCGCGGAGCATGT
CCCCATGCTCAAGGAGATGTACCGGCGTGGAATTGAAACCATCGAGGCGG
TTTATGGAGTGCCTGAGGAGCAATTGAGAGTGTTCGTCCACTACATGCCG
CAGTTTTACCACTTTCACGTACACTTCACCAGGCGTGGAATTGAAACCAT
CGAGGCGGTTTATGGAGTGCCTGAGGAGCAATTGAGAGTGTTCGTCCACT
ACATGCCGCAGTTTTACCACTTTCACGTACACTTCACCAGGGTGCACAAC
ACGATAGGCGTCGAGGCCGAGCGGGCCCACCTGCTGCTGGACGTAATCCA
GAACGCCGAGACGGCGCCGGCGAACGGCGGGGGCTCCTACTACGAGACCC
GCACGATGCAATTCAGGGTCCGCGAGAACGACGCTCTGCACCAAGCTTTC
AAGGACGCGGCCTCGACCCCTCAGCCCCTTCCTCGTCCCCGCCCCCGGCC
CGGACGCACGTGAGGTGCACAACACGATAGGCGTCGAGGCCGAGCGGGCC
CACCTGCTGCTGGACGTAATCCAGAACGCCGAGACGGCGCCGGCGAACGG
CGGGGGCTCCTACTACGAGACCCGCACGATGCAATTCAGGGTCCGCGAGA
ACGACGCTCTGCACCAAGCTTTCAAGGACGCGGCCTCGACCCCTCAGCCC
CTTCCTCGTCCCCGCCCCCGGCCCGGACGCACGTGA
back to top