mRNA_H-canaliculatus_F_contig1506.3808.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1506.3808.1 vs. uniprot
Match: A0A6H5KYX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYX8_9PHAE) HSP 1 Score: 345 bits (886), Expect = 1.800e-115 Identity = 174/263 (66.16%), Postives = 205/263 (77.95%), Query Frame = 1
Query: 43 ATEKMASWTLAIVFAFLFQPATGFLGDTGLRSIEAWRRTCVASVKHDCFTRSKRRTPSQ-----------VAAKGVGGLRSAFEVEVGRQLEVGSVLVAGSDNYGHMTYKAVALIYEHGEGGPTRAVCVDKGLDFTIGEMSSGDLGPLSNNRLFRGGEDGGEVAIMIHSHDIEGARPLGDTGLFVGGFVSALDLVDEQRAEPGDFKFFFNHLAWPAGALKEQVEKGLWKVVGLPNEVLLETKRMRDMELWGRIEFALKNKVQR 798
AT++ WT +++ + L +PA GF+G+ A R T S RS+ VAA GVGGL++AFEVE+ R LE+GSVLVAG+DNYG MT+KAVAL+YEHGEGGP+RAVCVDKGLDFTIGEMS+GDLGPLSNNRLFRGG+DGGE AIMIH HDI G+RPLGDTGLFVGGFV+ALDLV+E +A+P DFKFFFNHL+WPAGAL+EQV KGLWKVV LP +VLLETKRMRDMELWGRIEFAL+ K ++
Sbjct: 2 ATQRSTLWTWSLLVSCLVRPAAGFVGNAA-----ALRLTTTESACPRTSARSRAAXXXXXXXXXXXXXXXVAAGGVGGLQAAFEVELDRGLEIGSVLVAGADNYGSMTFKAVALVYEHGEGGPSRAVCVDKGLDFTIGEMSTGDLGPLSNNRLFRGGDDGGEAAIMIHPHDIMGSRPLGDTGLFVGGFVTALDLVEENKAKPSDFKFFFNHLSWPAGALQEQVGKGLWKVVRLPKDVLLETKRMRDMELWGRIEFALQKKAEQ 259
BLAST of mRNA_H-canaliculatus_F_contig1506.3808.1 vs. uniprot
Match: D7FZK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZK6_ECTSI) HSP 1 Score: 337 bits (865), Expect = 3.260e-113 Identity = 159/194 (81.96%), Postives = 182/194 (93.81%), Query Frame = 1
Query: 217 QVAAKGVGGLRSAFEVEVGRQLEVGSVLVAGSDNYGHMTYKAVALIYEHGEGGPTRAVCVDKGLDFTIGEMSSGDLGPLSNNRLFRGGEDGGEVAIMIHSHDIEGARPLGDTGLFVGGFVSALDLVDEQRAEPGDFKFFFNHLAWPAGALKEQVEKGLWKVVGLPNEVLLETKRMRDMELWGRIEFALKNKVQR 798
+VAA GVGGL+++FEVE+ R LE+GSVLVAG+DNYG MT+KAVAL+YEHGEGGP+RAVCVDKGLDFTIGEMS+GDLGPLSNNRLFRGG+DGGE AIMIH HDI G+RPLGDTGLFVGGFV+ALDLV+E +A+PGDFKFFFNHL+WPAGAL+EQV KGLWKVV LPN+VLLETKRMRDMELWGRIEFAL+ K ++
Sbjct: 5 RVAAGGVGGLQASFEVELDRGLEIGSVLVAGADNYGSMTFKAVALVYEHGEGGPSRAVCVDKGLDFTIGEMSTGDLGPLSNNRLFRGGDDGGEAAIMIHPHDIMGSRPLGDTGLFVGGFVTALDLVEENKAKPGDFKFFFNHLSWPAGALQEQVGKGLWKVVRLPNDVLLETKRMRDMELWGRIEFALQKKAEQ 198
BLAST of mRNA_H-canaliculatus_F_contig1506.3808.1 vs. uniprot
Match: A0A835YY37_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY37_9STRA) HSP 1 Score: 165 bits (418), Expect = 9.820e-46 Identity = 81/172 (47.09%), Postives = 113/172 (65.70%), Query Frame = 1
Query: 247 RSAFEVEVGRQLEVGSVLVAGSDNYGHMTYKAVALIYEHGEGGPTRAVCVDKGLDFTIGEMSSGDLGPLSNNRLFRGGEDGGEVAIMIHSH-DIEGARPLGDTGLFVGGFVSALDLVDEQRAEPGDFKFFFNHLAWPAGALKEQVEKGLWKVVGLPNEVLLETKRMRDMELW 759
R A V+ L+ G VLVA ++YGH T K+VAL++E+ ++AV +D+G FTIGEM+S D+GPL+NNRL+RGGEDGG +MIH D+ GA+ +GD+ LFVGG +A + V +A+ +FKFFFN + W G L+EQVEKG W + L ++ +D ELW
Sbjct: 40 RCALSVQPVEGLDAGVVLVASKNDYGHFTMKSVALVFEYSMEA-SKAVVLDRGSPFTIGEMTSLDMGPLANNRLYRGGEDGGSAVVMIHMRGDLAGAQQIGDSDLFVGGLQAAKEAVASGQAQASEFKFFFNFMRWSPGGLEEQVEKGKWSTIFLDKSAIMAQASNKDQELW 210
BLAST of mRNA_H-canaliculatus_F_contig1506.3808.1 vs. uniprot
Match: A0A8J6CH84_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CH84_DIALT) HSP 1 Score: 115 bits (288), Expect = 4.250e-27 Identity = 58/141 (41.13%), Postives = 88/141 (62.41%), Query Frame = 1
Query: 274 RQLEVGSVLVAGSDNYGHMTYKAVALIYEHGEGGPTRAVCVDKGLDFTIGEMSSGDLGPLSNNRLFRGGEDGGEVAIMIHSH-DIEGARPLGDTGLFVGGFVSALDLVDEQRAEPGDFKFFFNHLAWPAGALKEQVEKGLW 693
R L G+VLV+ D Y H ++AV L+ EH E G +R V +++ FT+GEM+SG +G + + RGG G + +M+H+ D+ G++P+G +GL++GG A LV + AEP +FKFFFN W GAL++Q+ W
Sbjct: 9 RSLRAGTVLVSQPDQYDHFFHEAVVLVCEHSEHG-SRGVLLNRETPFTMGEMASG-MGCFDEHSVHRGGNGGADTVLMLHARADVAGSKPIGSSGLYLGGLRHAQQLVADGLAEPSEFKFFFNSEVWAPGALEQQLRTLWW 147
BLAST of mRNA_H-canaliculatus_F_contig1506.3808.1 vs. uniprot
Match: A0A7S4A408_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A408_9STRA) HSP 1 Score: 110 bits (276), Expect = 8.660e-25 Identity = 68/170 (40.00%), Postives = 92/170 (54.12%), Query Frame = 1
Query: 289 GSVLVAGSDNYGHMTYKAVALIYEHGEGGPTRAVCVDKGLDFTIGEMSSGDL--GPLSNNRLFRGGEDGGEVAIMIHS-HDIEGARPLGDTGLFVGGFVSALDLVDEQRAEPGDFKFFFNHLAWPAGALKEQVEKGLWKVV-GLPNEVLLETKRMRDM-ELWGRIEFALK 783
G V++A + Y H +A L+ EH E G + V +D TIGE + G L L+ NRLF GGE GG+ A MIH+ D+ GAR LG + LF+GG A V+ P DFKFFFN W G L + + G W+ + G+P EV+L+ D +LW + A K
Sbjct: 57 GQVVLAPRNEYNHFLRQAAVLVVEHTERG-SLGVSLDSPTLLTIGEAAKGLLEDSELAENRLFMGGEYGGDSATMIHACEDVAGARRLGGSDLFLGGLADAAKRVNAGINRPEDFKFFFNFCKWAPGELDDAIADGRWRALTGVPREVVLDQDPFADRGKLWRTLGRAAK 225
BLAST of mRNA_H-canaliculatus_F_contig1506.3808.1 vs. uniprot
Match: A0A7S3HFL0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HFL0_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 4.200e-20 Identity = 48/115 (41.74%), Postives = 69/115 (60.00%), Query Frame = 1
Query: 439 DLGPLSNNRLFRGGEDGGEVAIMIHSHDIEG-ARPLGDTGLFVGGFVSALDLVDEQRAEPGDFKFFFNHLAWPAGALKEQVEKGLWKVVGLPNEVLLETKRMRDMELWGRIEFAL 780
+ G N LF+GGE+G + A+MIH +D+ G +RPLG+ G+FVGG A + V P DFKF FN++ WP GALK ++E G W V +P ++L++ LW + AL
Sbjct: 7 ETGEFKGNLLFKGGENGQDTAVMIHKYDLGGYSRPLGN-GVFVGGSKQAREKVRTLVTHPRDFKFIFNNIQWPPGALKSEIENGDWDVCQVPVDMLIQQDEEWVDRLWLTLRTAL 120
BLAST of mRNA_H-canaliculatus_F_contig1506.3808.1 vs. uniprot
Match: A0A7S0DJ91_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DJ91_9EUKA) HSP 1 Score: 84.3 bits (207), Expect = 2.430e-16 Identity = 38/108 (35.19%), Postives = 64/108 (59.26%), Query Frame = 1
Query: 478 GEDGGEVAIMIHS-HDIEGARPLGDTGLFVGGFVSALDLVDEQRAEPGDFKFFFNHLAWPAGALKEQVEKGLWKVVGLPNEVLLETKRMRDMELWGRIEFALKNKVQR 798
G DG + +M+H+ ++EGA P+GD+G+++GG +A+ LV+ EP F FFF W GAL++++ + LWK+ + +LL+ K R +LW + L K +
Sbjct: 1 GGDGPDKLLMLHNIPELEGAVPIGDSGVYIGGVTAAVQLVERGDLEPDQFHFFFKRCEWLPGALQKEINQELWKMAKVSPHLLLKQKGRRKRKLWNDLRSRLLKKTNK 108
BLAST of mRNA_H-canaliculatus_F_contig1506.3808.1 vs. uniprot
Match: B8BQX9_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQX9_THAPS) HSP 1 Score: 85.9 bits (211), Expect = 5.060e-16 Identity = 57/179 (31.84%), Postives = 92/179 (51.40%), Query Frame = 1
Query: 289 GSVLVAGSDNYGHMTYKAVALIYEHGEGGPTRAVCVDKGLDFTI--GEMSSGDLGPLSNNRLFRGGEDGGEVAIMIHS-HDIEGARPLGDTGLFVGGFVSALDLVDEQRAEPGDFKFFFNHLAWPAGALKEQ---VEKG-LWKVVGLPNEVLLETKRMRDMELWGRIEFALKNKVQR*R 804
G VLV+ Y H KA +Y A+ +D D I GEMS +G LS N L+RGG G + A+M+HS ++ +G++G++ GG VSA++ D P + KFFFN++ + + + VE G W + +P+E +L++ R +W + L+NK++ R
Sbjct: 27 GVVLVSPVHEYDHFLMKAAVFVY---------AIGLDDNEDMVIRVGEMSPNVMGNLSQNMLYRGGNSGSDTAMMLHSASSLQSGEMIGNSGIYEGGIVSAMEAADAGIISPNNCKFFFNYMQFRELEIDDMFATVEDGDAWVSLEVPSEYVLDSDLDRGA-MWSK----LRNKIREFR 191
BLAST of mRNA_H-canaliculatus_F_contig1506.3808.1 vs. uniprot
Match: A0A4D9D3B9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3B9_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 6.670e-16 Identity = 59/185 (31.89%), Postives = 95/185 (51.35%), Query Frame = 1
Query: 280 LEVGSVLVAGSDNYGHMTYKAVALIYEHGEGGPTRAVCVDKGLDFTIGEMSSGDLGPL-SNNRLFRGGEDGGEVAIMIHSHD-IEGARPLGDTGLFVGGFVSALDLVDEQ-----------RAEPG----DFKFFFNHLAWPAGALKEQVEKGLWKVV--------GLPNEVLLETKRMRDMELW 759
L+ G +LVA Y H T K+ +Y+H +R V ++K FT+ E++ + +N+ +F GGE GG++A+++H + + G R +G GL+ GG A + EQ +AE G FK++FN+++W G L++QV KG W V+ G VL + + D ELW
Sbjct: 72 LQQGQILVAKPWEYNHFTSKSCLFLYKHDSETGSRGVVLEKPTAFTLSELAPPFAASVFANHTVFLGGEQGGDMAVLLHPYKHVPGVRSVGG-GLYYGGLSGAEAMFKEQEDHHILAPAENKAEHGLDRSQFKWWFNYMSWGPGQLEDQVLKGSWDVMEGEGGEGEGAARAVLRQGLAL-DRELW 254
BLAST of mRNA_H-canaliculatus_F_contig1506.3808.1 vs. uniprot
Match: K0TDW8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TDW8_THAOC) HSP 1 Score: 82.8 bits (203), Expect = 2.070e-14 Identity = 55/184 (29.89%), Postives = 89/184 (48.37%), Query Frame = 1
Query: 289 GSVLVAGSDNYGHMTYKAVALIYEHGEGGPT-----RAVCVDKGLDFTIGEMSSGDLGPLSNNRLFRGGEDGGEVAIMIHSHD-IEGA-----RPLGDTGLFVGGFVSALDLVDEQRAEPGDFKFFFNHLAWPAGALKEQVEK------GLWKVVGLPNEVLLETKRMRDMELWGRIEFALKNK 789
GSVLV+ S + H ++ +Y GE RAV +D F IGEMS L+NN LFRGG DG + +++HS ++G+ +G +G++ GG S VD +P KFFFN++ + L + W + +P E++L ++ R +LW ++ +K +
Sbjct: 65 GSVLVSPSFEFDHFLMRSAIFVYAIGEDDQQDETIIRAVVIDHPTAFDIGEMSPTVTSRLANNTLFRGGYDGSDAVMLLHSAGGMDGSVETTGSEIGCSGIYEGGISSIQKQVDAGLIDPSQCKFFFNYMEFGLKQLDDMFRTVGVPDWDSWTSIEIPPEMVLSSEYARG-QLWAKLRGIIKRQ 247 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1506.3808.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1506.3808.1 >prot_H-canaliculatus_F_contig1506.3808.1 ID=prot_H-canaliculatus_F_contig1506.3808.1|Name=mRNA_H-canaliculatus_F_contig1506.3808.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=249bp MASWTLAIVFAFLFQPATGFLGDTGLRSIEAWRRTCVASVKHDCFTRSKRback to top mRNA from alignment at H-canaliculatus_F_contig1506:13035..15700- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1506.3808.1 ID=mRNA_H-canaliculatus_F_contig1506.3808.1|Name=mRNA_H-canaliculatus_F_contig1506.3808.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2666bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1506:13035..15700- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1506:13035..15700- >mRNA_H-canaliculatus_F_contig1506.3808.1 ID=mRNA_H-canaliculatus_F_contig1506.3808.1|Name=mRNA_H-canaliculatus_F_contig1506.3808.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1494bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1506:13035..15700- (Hapterophycus canaliculatus Oshoro5f female)back to top |