mRNA_H-canaliculatus_F_contig15042.3792.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig15042.3792.1 vs. uniprot
Match: D7G1X1_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1X1_ECTSI) HSP 1 Score: 310 bits (795), Expect = 1.190e-98 Identity = 160/168 (95.24%), Postives = 163/168 (97.02%), Query Frame = 1
Query: 1 VSSTQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSALLCTLNVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERVGMALRV 504
+ S QMEKDVHAYLFCA YPGRTLIFVNAIAIARRLSALLC L+VPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLH GMQAFPLD+RMVERARERVGMALRV
Sbjct: 516 IKSLQMEKDVHAYLFCAMYPGRTLIFVNAIAIARRLSALLCALSVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHGGMQAFPLDVRMVERARERVGMALRV 683
BLAST of mRNA_H-canaliculatus_F_contig15042.3792.1 vs. uniprot
Match: A0A6H5KFI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI4_9PHAE) HSP 1 Score: 312 bits (800), Expect = 4.800e-98 Identity = 161/168 (95.83%), Postives = 163/168 (97.02%), Query Frame = 1
Query: 1 VSSTQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSALLCTLNVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERVGMALRV 504
+ S QMEKDVHAYLFCA YPGRTLIFVNAIAIARRLSALLC LNVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLH GMQAFPLD+RMVERARERVGMALRV
Sbjct: 681 IKSLQMEKDVHAYLFCAMYPGRTLIFVNAIAIARRLSALLCALNVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHGGMQAFPLDVRMVERARERVGMALRV 848
BLAST of mRNA_H-canaliculatus_F_contig15042.3792.1 vs. uniprot
Match: A0A1Y1XYA8_9FUNG (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XYA8_9FUNG) HSP 1 Score: 178 bits (451), Expect = 6.120e-49 Identity = 86/168 (51.19%), Postives = 121/168 (72.02%), Query Frame = 1
Query: 1 VSSTQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSALLCTLNVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERVGMALRV 504
+ +KDV+ Y F YPGRTL+FVN+I RR+ L L V A LHAQMQQRQRLK++DRF S+PKAVL+A+DVAARGLDIP VE VVHY RS E+++HR+GRTARA+ G+S+++V P + + +++ C VLG +G+ FP+D ++ R+RV +A+++
Sbjct: 518 IDCVMKDKDVYLYYFLVRYPGRTLVFVNSIDAIRRMLPFLQALGVQAYGLHAQMQQRQRLKNVDRFKSNPKAVLIASDVAARGLDIPLVEQVVHYQLPRSGEIYVHRSGRTARAKKEGISVALVCPEELSLYKKICHVLGKQNGLSEFPVDRTLITSMRQRVALAIKI 685
BLAST of mRNA_H-canaliculatus_F_contig15042.3792.1 vs. uniprot
Match: UPI000C6D728E (ATP-dependent RNA helicase DDX24-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6D728E) HSP 1 Score: 167 bits (424), Expect = 2.270e-48 Identity = 83/162 (51.23%), Postives = 111/162 (68.52%), Query Frame = 1
Query: 19 EKDVHAYLFCATYPGRTLIFVNAIAIARRLSALLCTLNVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERVGMALRV 504
EKD++ Y F A YPGRTLIF N+I RRL ++L L PLHA M QRQRLK+LDRF S ++L+ATDVAARGLDI +EHVVHY R+AE+++HR+GRTARA GLSL ++ P++ +RQ C L + FPLDM +++ +ER+ + R+
Sbjct: 54 EKDLYLYYFLAIYPGRTLIFCNSIDCVRRLRSILSLLGYDPLPLHASMHQRQRLKNLDRFASKDNSLLLATDVAARGLDIVGIEHVVHYQVPRTAEIYVHRSGRTARAMKEGLSLMLIEPKESFYYRQLCKALNRDQDLPLFPLDMTLLKPIQERIALVHRI 215
BLAST of mRNA_H-canaliculatus_F_contig15042.3792.1 vs. uniprot
Match: D0NJ74_PHYIT (DEAD/DEAH box RNA helicase, putative n=14 Tax=Phytophthora TaxID=4783 RepID=D0NJ74_PHYIT) HSP 1 Score: 174 bits (440), Expect = 1.550e-47 Identity = 91/162 (56.17%), Postives = 111/162 (68.52%), Query Frame = 1
Query: 10 TQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSALLCTLNVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERVGMA 495
T+ +D Y F YPGRT+IF+NAI R+LS LL LN+P LHA+MQQRQRLK LD F S K +LVATDVAARGLDIP V++VVHY ARS EVF+HR+GRTARA GLS+S+V+P D H Q C +L G+ FP D R +E ER+ +A
Sbjct: 479 TESTRDSFLYFFLTQYPGRTIIFLNAIHQVRKLSGLLTLLNLPVFALHAEMQQRQRLKKLDGFRSHSKGILVATDVAARGLDIPSVDYVVHYHIARSTEVFVHRSGRTARANKDGLSISLVSPTDAKYHTQICKMLQRPTGLSDFPFDHRYLEAIDERLRLA 640
BLAST of mRNA_H-canaliculatus_F_contig15042.3792.1 vs. uniprot
Match: W7TKC3_9STRA (Atp-dependent rna helicase ddx24 (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKC3_9STRA) HSP 1 Score: 170 bits (430), Expect = 2.850e-47 Identity = 95/182 (52.20%), Postives = 115/182 (63.19%), Query Frame = 1
Query: 1 VSSTQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSALLCTLNVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVL-----------------GLHDGMQAFPLDMRMVERARERVGMA 495
V S KD + Y F +PGRT++F N+I RRL+ LL L +PA LHA+MQQR RLKSLD F + +AVLVATDVAARGLDIP VEHV+HYD RS EVF+HRAGRTARA GLS S+VAPRD+ H + C L G GM FP+D++ + RERV +A
Sbjct: 233 VKSVGAHKDAYLYYFLRRHPGRTIVFTNSIDQTRRLAQLLSLLRLPARALHAKMQQRARLKSLDCFRAQRQAVLVATDVAARGLDIPLVEHVIHYDMPRSLEVFVHRAGRTARANREGLSFSMVAPRDEKFHDEVCRALFASSPSQRPEHPKEASGGSGAGMLPFPVDLQELNATRERVHLA 414
BLAST of mRNA_H-canaliculatus_F_contig15042.3792.1 vs. uniprot
Match: A0A425C7F4_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A425C7F4_9STRA) HSP 1 Score: 173 bits (438), Expect = 4.780e-47 Identity = 88/159 (55.35%), Postives = 111/159 (69.81%), Query Frame = 1
Query: 10 TQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSALLCTLNVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERV 486
T+ +D Y F YPGRT+IF+NAI R+L++LL LN+P LHA+MQQRQRLK LD F + PK +LVATDVAARGLDIP VE+VVHY A S E+F+HR+GRTARA GLS+++V+P D NH Q C +L G+ FP D R +E ER+
Sbjct: 574 TESTRDNFLYYFLTQYPGRTIIFLNAIHQVRKLTSLLSLLNLPVFALHAEMQQRQRLKKLDGFRAHPKGILVATDVAARGLDIPSVEYVVHYHIACSTEIFVHRSGRTARANKEGLSIALVSPTDAKNHAQICKMLQRPTGLSDFPFDHRYMEAIDERM 732
BLAST of mRNA_H-canaliculatus_F_contig15042.3792.1 vs. uniprot
Match: A0A397TQI4_9GLOM (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TQI4_9GLOM) HSP 1 Score: 172 bits (436), Expect = 4.860e-47 Identity = 84/162 (51.85%), Postives = 119/162 (73.46%), Query Frame = 1
Query: 19 EKDVHAYLFCATYPGRTLIFVNAIAIARRLSALLCTLNVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERVGMALRV 504
EKD++ Y F YPGRTLIFVN+I RRL ++ LN+ LHAQMQQRQRLK+LDRF +PKAV++A+DVAARGLDIP VEHV+HY RS++++IHR+GRTARAR G+SL + +P + + +R+ C L DG++ FP+D ++ ++R+ +A ++
Sbjct: 485 EKDLYMYYFITRYPGRTLIFVNSIDAIRRLIPIIKLLNIEVFGLHAQMQQRQRLKNLDRFKQNPKAVMIASDVAARGLDIPLVEHVIHYQLPRSSDIYIHRSGRTARARKEGISLMLCSPEEQSLYRKLCLNLNKADGLRDFPVDRGILYSMKQRIQLARQI 646
BLAST of mRNA_H-canaliculatus_F_contig15042.3792.1 vs. uniprot
Match: A0A836CDB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDB6_9STRA) HSP 1 Score: 173 bits (439), Expect = 5.000e-47 Identity = 86/165 (52.12%), Postives = 117/165 (70.91%), Query Frame = 1
Query: 7 STQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSALLCTLNVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERVGMALR 501
S Q +KD YLF +PGRTL+FVNA+ +ARR++ +L L +P PLHAQM QR RL++LD + + ++ATDVAARGLD+P V+HVVHYDA RSA F+HR+GRTARA G +LSI+APRD+A + + +G G+ A P D R++++ARER +A R
Sbjct: 795 SLQADKDAWLYLFATQFPGRTLVFVNAVVMARRVAQVLQLLRIPCAPLHAQMAQRARLRALDFLRTSERCCVIATDVAARGLDVPHVDHVVHYDAPRSAADFVHRSGRTARAGRGGFALSIIAPRDEAAFARVFAAVGYPAGLPALPCDPRLLDKARERALLAAR 959
BLAST of mRNA_H-canaliculatus_F_contig15042.3792.1 vs. uniprot
Match: A0A484EDS4_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDS4_BRELC) HSP 1 Score: 172 bits (437), Expect = 5.640e-47 Identity = 90/162 (55.56%), Postives = 111/162 (68.52%), Query Frame = 1
Query: 10 TQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSALLCTLNVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERVGMA 495
T +D Y F YPGRT+IF+NAI R+L++LL L++P LHA+MQQRQRLK LD F S +LVATDVAARGLDIP V+HVVHY ARS EVF+HR+GRTARA GLS+S+V+P D NH Q C +L G+ FP D R ++ ERV +A
Sbjct: 537 TDFTRDSFLYYFLTQYPGRTIIFLNAIHQVRKLTSLLTLLSLPVFALHAEMQQRQRLKKLDGFRSHANGILVATDVAARGLDIPSVDHVVHYHIARSTEVFVHRSGRTARANKDGLSISLVSPADVKNHLQICKMLQRPTGLSDFPFDHRYLKAIDERVRLA 698 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15042.3792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig15042.3792.1 >prot_H-canaliculatus_F_contig15042.3792.1 ID=prot_H-canaliculatus_F_contig15042.3792.1|Name=mRNA_H-canaliculatus_F_contig15042.3792.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=163bp MEKDVHAYLFCATYPGRTLIFVNAIAIARRLSALLCTLNVPATPLHAQMQback to top mRNA from alignment at H-canaliculatus_F_contig15042:160..1871+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig15042.3792.1 ID=mRNA_H-canaliculatus_F_contig15042.3792.1|Name=mRNA_H-canaliculatus_F_contig15042.3792.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1712bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15042:160..1871+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig15042:160..1871+ >mRNA_H-canaliculatus_F_contig15042.3792.1 ID=mRNA_H-canaliculatus_F_contig15042.3792.1|Name=mRNA_H-canaliculatus_F_contig15042.3792.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=978bp|location=Sequence derived from alignment at H-canaliculatus_F_contig15042:160..1871+ (Hapterophycus canaliculatus Oshoro5f female)back to top |