mRNA_H-canaliculatus_F_contig1500.3774.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1500.3774.1 vs. uniprot
Match: A0A6H5L219_9PHAE (Holocytochrome c-type synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L219_9PHAE) HSP 1 Score: 231 bits (588), Expect = 5.810e-72 Identity = 120/154 (77.92%), Postives = 125/154 (81.17%), Query Frame = 1
Query: 16 YNAMNNEYVYGQEMAAGQEMPLSTSRQRSSIPKADFNPDHQPKK----WVYPSEQQYYNAIKRKGYKASATDMPSTLAIHNAVNEKGWEMVQEWERERAEAAATGGAGEGRGDA---AVLPAPKLLRFTGRPKDTSPKAWVKSTLLGYRPPFDR 456
YNA NNEYVYGQE+AAGQE+PLSTSRQRSSIPKA+FNPDHQP+K WVYPSEQQYYNAIKRKGYKASA DMPSTLAIHNAVNEKGWEMVQEWER R V APKLLRFTGRP+DTSPKAWVKSTLLGYRPPFDR
Sbjct: 177 YNARNNEYVYGQEVAAGQEVPLSTSRQRSSIPKAEFNPDHQPQKEAEKWVYPSEQQYYNAIKRKGYKASAADMPSTLAIHNAVNEKGWEMVQEWERARXXXXXXXXXXXXXXXXXXXGVPAAPKLLRFTGRPQDTSPKAWVKSTLLGYRPPFDR 330
BLAST of mRNA_H-canaliculatus_F_contig1500.3774.1 vs. uniprot
Match: D8LGP6_ECTSI (Holocytochrome c-type synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP6_ECTSI) HSP 1 Score: 228 bits (581), Expect = 1.500e-70 Identity = 125/191 (65.45%), Postives = 132/191 (69.11%), Query Frame = 1
Query: 16 YNAMNNEYVYGQEMAAGQEMPLSTSRQRSSIPKADFNPDHQPKK----WVYPSEQQYYNAIKRKGYKASATDMPSTLAIHNAVNEKGWEMVQEWERERAEAAAT------------------------GGAGEGRGDAAV----------------LPAPKLLRFTGRPKDTSPKAWVKSTLLGYRPPFDR 456
YNA NNEYVYGQE+AAGQE+PLSTSRQRSSIPKA+FNPDHQP+K WVYPSEQQYYNAIKRKGYKASA DMPSTLAIHNAVNEKGWEMVQEWER AEAA GG G G + +PAPKL RFTGRP+DTSPKAWVKSTL GYRPPFDR
Sbjct: 163 YNARNNEYVYGQEVAAGQEVPLSTSRQRSSIPKAEFNPDHQPQKEAEKWVYPSEQQYYNAIKRKGYKASAADMPSTLAIHNAVNEKGWEMVQEWERAHAEAAXXXXXXXXXXXXXXXXXXXXXXEGFRGGEGLHPGAPQIGTPPXXXXXXXXXXVGVPAPKLFRFTGRPQDTSPKAWVKSTLFGYRPPFDR 353
BLAST of mRNA_H-canaliculatus_F_contig1500.3774.1 vs. uniprot
Match: A0A835ZPE3_9STRA (Holocytochrome c-type synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPE3_9STRA) HSP 1 Score: 143 bits (360), Expect = 5.320e-40 Identity = 76/146 (52.05%), Postives = 93/146 (63.70%), Query Frame = 1
Query: 28 NNEYVYGQEMAAGQEMPLSTSRQRSSIPKADFNPDHQPKK---WVYPSEQQYYNAIKRKGYKASATDMPSTLAIHNAVNEKGWEMVQEWERERAEAAATGGAGEGRGDAAVLPAPKLLRFTGRPKDTSPKAWVKSTLLGYRPPFDR 456
++E V G Q +PLST+RQ S+IPK + P HQP+ WVYPSEQQY+NA+KRKG++A D+P LAIHNAVNE+GW V+EWE R GD PKL F GRP D SPKAW K+ +LGY+PPFDR
Sbjct: 6 SDESVSGGGCPVKQTVPLSTARQCSTIPKGEVTPQHQPEGANVWVYPSEQQYFNAMKRKGWEAQEQDVPIVLAIHNAVNEQGWSKVREWEAMRG------------GD------PKLKEFRGRPNDISPKAWFKTNVLGYKPPFDR 133
BLAST of mRNA_H-canaliculatus_F_contig1500.3774.1 vs. uniprot
Match: W7TBT6_9STRA (Holocytochrome c-type synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TBT6_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.460e-37 Identity = 82/157 (52.23%), Postives = 95/157 (60.51%), Query Frame = 1
Query: 1 PSSAEYNAMNNEYVYGQEMAAGQEMPLSTSRQRSSIPKADFNPDHQPK----KWVYPSEQQYYNAIKRKGYKASATDMPSTLAIHNAVNEKGWEMVQEWERERAEAAATGGAGEGRGDAAVLPAPKLLRFTGRPKDTSPKA-WVKSTLLGYRPPFDR 456
PSS+ N +NNE Y Q Q +PLSTSR+ SSIPK+DF P HQPK KWVYPSEQQY+NA+K KG+ D+ LAIHNAVNE+GW V EWE GG G PKL RF GRP+D SPKA W+ + GY PFDR
Sbjct: 74 PSSSPVNPLNNERQYSQVPQPSQAVPLSTSREISSIPKSDFTPKHQPKWAGDKWVYPSEQQYFNAMKSKGFDPLPQDVGIILAIHNAVNEQGWRKVLEWE---------GGLGS--------TPPKLKRFMGRPQDLSPKAAWL--WMCGYNKPFDR 211
BLAST of mRNA_H-canaliculatus_F_contig1500.3774.1 vs. uniprot
Match: A0A7S3HNG9_9STRA (Holocytochrome c-type synthase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNG9_9STRA) HSP 1 Score: 138 bits (347), Expect = 2.330e-37 Identity = 75/150 (50.00%), Postives = 92/150 (61.33%), Query Frame = 1
Query: 16 YNAMNNEYVYGQEMAAGQEMPLSTSRQRSSIPKADFNPDHQPK---KWVYPSEQQYYNAIKRKGYKASATDMPSTLAIHNAVNEKGWEMVQEWERERAEAAATGGAGEGRGDAAVLPAPKLLRFTGRPKDTSPKAWVKSTLLGYRPPFDR 456
YN N++V+ Q A Q+ LS R S+IPK DF P+HQPK KWVYPSEQQYYNA+KRKGY S D+P+ L IHN VNEKGW V+EWE A +G P PKL +F G+P SPKA + + ++GY PFDR
Sbjct: 62 YNTNANDFVFDQSRTADQKANLSVKRATSTIPKGDFTPEHQPKATEKWVYPSEQQYYNAMKRKGYNPSEADIPAVLFIHNHVNEKGWSQVKEWE------AYSG-----------FPNPKLKKFMGKPTQLSPKARLLN-MIGYSKPFDR 193
BLAST of mRNA_H-canaliculatus_F_contig1500.3774.1 vs. uniprot
Match: A0A7S4DXX3_9EUKA (Holocytochrome c-type synthase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DXX3_9EUKA) HSP 1 Score: 122 bits (307), Expect = 3.210e-32 Identity = 69/153 (45.10%), Postives = 87/153 (56.86%), Query Frame = 1
Query: 7 SAEYNAMNNEYVYGQEMAAGQEMPLSTSRQRSSIPKADFNPDHQPK---KWVYPSEQQYYNAIKRKGYKASATDMPSTLAIHNAVNEKGWEMVQEWERERAEAAATGGAGEGRGDAAVLPAPKLLRFTGRPKDTSPKAWVKSTLLGYRPPFDR 456
++E N N Q + GQ MPL T R S+IPK DF P HQ + W YPS QQ+YNA+KRKGY+ DM S +AIHN VNEK W+ V EWE+ + P P+L +F+GR D S KA + +T +GYRPPFDR
Sbjct: 12 TSENNPSNQMPSLSQMPSRGQRMPLPTHRVESTIPKGDFKPSHQLEGKANWTYPSPQQFYNAMKRKGYQPKEEDMQSVVAIHNTVNEKTWKKVMEWEKMHLD---------------KCPNPRLEKFSGRANDQSLKARI-NTWMGYRPPFDR 148
BLAST of mRNA_H-canaliculatus_F_contig1500.3774.1 vs. uniprot
Match: A0A7S1UN93_9STRA (Holocytochrome c-type synthase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UN93_9STRA) HSP 1 Score: 125 bits (313), Expect = 5.780e-32 Identity = 69/138 (50.00%), Postives = 86/138 (62.32%), Query Frame = 1
Query: 67 QEMPLSTSRQRSSIPKADFN-----PDHQPKK---WVYPSEQQYYNAIKRKGYKASATDMPSTLAIHNAVNEKGWEMVQEWERERAEAAATGGAGEGRGDAAVLPAPKLLRFTGRPKDTSPKAWVKSTLLGYRPPFDR 456
Q +PLST R SSIP+ + P HQP WVYPSEQQ+YNA+KRKG++A + MP + IHNAVNE+GW V +WE A G P P+L+RF GRPKD SPKA++ + +LGYRPPFDR
Sbjct: 78 QRIPLSTQRSISSIPRESSSNETPPPSHQPTSSHNWVYPSEQQFYNAMKRKGWEADESTMPLVVRIHNAVNERGWSEVCKWE-------ALHG----------CPNPRLVRFLGRPKDISPKAFLNTYILGYRPPFDR 198
BLAST of mRNA_H-canaliculatus_F_contig1500.3774.1 vs. uniprot
Match: K0SEF6_THAOC (Holocytochrome c-type synthase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SEF6_THAOC) HSP 1 Score: 123 bits (309), Expect = 1.200e-31 Identity = 69/142 (48.59%), Postives = 83/142 (58.45%), Query Frame = 1
Query: 58 AAGQEMPLSTSRQRSSIPKAD------FNPDHQPKK---WVYPSEQQYYNAIKRKGYKASATDMPSTLAIHNAVNEKGWEMVQEWERERAEAAATGGAGEGRGDAAVLPAPKLLRFTGRPKDTSPKAWVKSTLLGYRPPFDR 456
AAGQ MPLST R SSIP+ D P HQP W YPSEQQ+YNA+ RKGY+ +PS L IHNAVNE+ W V++WER+ G GD P+L +F GRPKD SP+AW S +L + PFDR
Sbjct: 99 AAGQLMPLSTQRVTSSIPRGDKPSSGIIAPSHQPANSANWQYPSEQQFYNAMFRKGYRPPVESIPSVLQIHNAVNERSWAEVRKWERDL----------HGNGD------PRLAKFIGRPKDLSPRAWFNSNILMTQAPFDR 224
BLAST of mRNA_H-canaliculatus_F_contig1500.3774.1 vs. uniprot
Match: A0A7S0WA24_9CRYP (Holocytochrome c-type synthase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0WA24_9CRYP) HSP 1 Score: 117 bits (293), Expect = 3.970e-30 Identity = 65/135 (48.15%), Postives = 82/135 (60.74%), Query Frame = 1
Query: 67 QEMPLSTSRQRSSIPKADFNPDHQPK-----KWVYPSEQQYYNAIKRKGYKASATDMPSTLAIHNAVNEKGWEMVQEWERERAEAAATGGAGEGRGDAAVLPAPKLLRFTGRPKDTSPKAWVKSTLLGYRPPFDR 456
Q PLST+R SSIPK DF P HQ + +WVYPSEQ ++NA++RKG+ DM S +A+HNAVNE+ W V WER+ P P+L+RF GRPKD SP+A + S LLGY+ PFDR
Sbjct: 20 QSRPLSTARVESSIPKDDFTPAHQAENSQKERWVYPSEQMFFNAMQRKGWNPKEDDMSSVVALHNAVNEQTWNEVLRWERDLHP---------------ECPQPRLVRFYGRPKDFSPRARIFS-LLGYKLPFDR 138
BLAST of mRNA_H-canaliculatus_F_contig1500.3774.1 vs. uniprot
Match: A0A7S0WSL6_9CHLO (Holocytochrome c-type synthase n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WSL6_9CHLO) HSP 1 Score: 118 bits (295), Expect = 6.050e-30 Identity = 70/148 (47.30%), Postives = 87/148 (58.78%), Query Frame = 1
Query: 28 NNEYVYGQEMAAG--QEMPLSTSRQRSSIPKADFNPDHQPKK---WVYPSEQQYYNAIKRKGYKASATDMPSTLAIHNAVNEKGWEMVQEWERERAEAAATGGAGEGRGDAAVLPAPKLLRFTGRPKDTSPKAWVKSTLLGYRPPFDR 456
NN + Q AA Q +PLS R S+IPK +F P HQ K WVYPSEQ +YNA+KRKG++ + DMPS +AIHNAVNE+ W + WE A A P+P L +F GRPKD SPKA + + LGY+ PFDR
Sbjct: 44 NNMFFPKQIQAASSDQRIPLSIERVASTIPKDEFTPSHQSKTDPVWVYPSEQMFYNAMKRKGWQPNEVDMPSVVAIHNAVNERCWHEILTWEHLHASA---------------CPSPTLNKFEGRPKDYSPKARLLN-WLGYKLPFDR 175 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1500.3774.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1500.3774.1 >prot_H-canaliculatus_F_contig1500.3774.1 ID=prot_H-canaliculatus_F_contig1500.3774.1|Name=mRNA_H-canaliculatus_F_contig1500.3774.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=145bp MNNEYVYGQEMAAGQEMPLSTSRQRSSIPKADFNPDHQPKKWVYPSEQQYback to top mRNA from alignment at H-canaliculatus_F_contig1500:24226..25535+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1500.3774.1 ID=mRNA_H-canaliculatus_F_contig1500.3774.1|Name=mRNA_H-canaliculatus_F_contig1500.3774.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1310bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1500:24226..25535+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1500:24226..25535+ >mRNA_H-canaliculatus_F_contig1500.3774.1 ID=mRNA_H-canaliculatus_F_contig1500.3774.1|Name=mRNA_H-canaliculatus_F_contig1500.3774.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=870bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1500:24226..25535+ (Hapterophycus canaliculatus Oshoro5f female)back to top |