mRNA_H-canaliculatus_F_contig1500.3770.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1500.3770.1 vs. uniprot
Match: D8LGP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP4_ECTSI) HSP 1 Score: 444 bits (1141), Expect = 1.880e-140 Identity = 296/572 (51.75%), Postives = 341/572 (59.62%), Query Frame = 1
Query: 271 RSIAALMVWATPVVLAVSRETSLRGAQQVESFRGTGVRRGLT----EAYEHVGCFADNSNERVLKS-PLWSDNMTAELCYERCHQLGAHYMSTQYGKECWCSRLEDLDYQQHGFGLCDMECSGDAEETCGGFDAFDLYRLVPGDVPTSEEYVGCFVDTEE-RVMTHMIVESDMTPVSCRSHCESTGAKYFATQYGNECFCGTSDVASDYEVNGEGTCHIPCYGDDSVACGGYWAFSLFKF-ADRSEPAATPEPVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGDFSGGQYGTEYSGEGTYYGETTEGNCAYGGDVPGMYSGMIPFALNAPQYGDSLMCGACLEGTASGVGEGATPFPSTFKGFITDQCPECASGDLDMSVSGDGRWDIEWKFVPCP-GETISFKFEGSNPYFWKIQPQGTETPVESVRINGQRMARTLDNHFELE---GGPWEGSQTVETTTVAGVTRTSEVSL 1953
R AAL+V ATPV S ETSLRGA+ G RRGL+ EAYEHVGC+ DN PL + MT E+CY+RCH+LG+ +M TQ G EC CSR EDL Y FG+CD+ C+GD++ETCGG DLY+L P EEYVGC+ D E RVM M+V+ MT CR HCES+ A Y+ATQYGNECFCG S DYE +G GTCH+ C GD ACGGYWAFSL++F AD PE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GD SGG+YG ++GEGTYY T+ GNC + D P +Y GM P ALN PQYGDSLMCGAC+EG +G G G+ P TFKGFI D+CPEC+ GDLD DGRWDI+WKFV CP GE +SFK E Y+WKIQP+GT TPVES+ I G+ ART DNHFELE G PW Q V TTTV GV +E+S+
Sbjct: 3 RLAAALLVCATPVA---SLETSLRGAE----VSAGGARRGLSGSSYEAYEHVGCYVDNGMVNARPHLPLVMETMTNEMCYDRCHELGSFFMGTQKGNECRCSREEDLAYSAFDFGVCDIPCAGDSDETCGGQLTIDLYKLTAAQTPDHEEYVGCWSDANESRVMEDMLVDEGMTTDMCRDHCESSDAVYYATQYGNECFCGYSSDPEDYETHGLGTCHMHCGGDSGSACGGYWAFSLYQFGADGMPEPDVPESTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSGGGG------------------------------------------------------------------------GDVSGGEYGITFNGEGTYYTGTSAGNCGFFDDFPSIYDGMTPVALNEPQYGDSLMCGACVEGEGTGGGSGSDPV-GTFKGFIMDKCPECSEGDLDFGTGKDGRWDIKWKFVECPAGEEVSFKVEQKTEYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGDPWYEPQMVVTTTVGGVVEETEMSV 494
BLAST of mRNA_H-canaliculatus_F_contig1500.3770.1 vs. uniprot
Match: A0A6H5KBW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW3_9PHAE) HSP 1 Score: 443 bits (1140), Expect = 8.560e-140 Identity = 257/582 (44.16%), Postives = 297/582 (51.03%), Query Frame = 1
Query: 271 RSIAALMVWATPVVLAVSRETSLRGAQQVESFRGTGVRRGLT----EAYEHVGCFADNSNERVLKS-PLWSDNMTAELCYERCHQLGAHYMSTQYGKECWCSRLEDLDYQQHGFGLCDMECSGDAEETCGGFDAFDLYRLVPGDVPTSEEYVGCFVDT-EERVMTHMIVESDMTPVSCRSHCESTGAKYFATQYGNECFCGTSDVASDYEVNGEGTCHIPCYGDDSVACGGYWAFSLFKFA----------DRSEPAA--TPEPVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGDFSGGQYGTEYSGEGTYYGETTEGNCAYGGDVPGMYSGMIPFALNAPQYGDSLMCGACLEGTASGVGEGATPFPSTFKGFITDQCPECASGDLDMSVSGDGRWDIEWKFVPCPGETISFKFEGSNPYFWKIQPQGTETPVESVRINGQRMARTLDNHFELE---GGPWEGSQTVETTTVAGVTRTSEVSL 1953
R AAL+V ATPV S ETSLRGA+ V + G G RRGL+ E+YEH+GC+ DN PL D MT ELCY+RCH+LGA +M TQ G EC CSR EDLDY G+CD C+GD+ ETCGG DLY+L P D P EEY GC+ D E RVM M+V+ MT CR HCES+ A Y+ATQYGNECFCG S DYE +G GTCH+ C GD ACGGYWAFSLFKF D SEP + PEPV SGG YGT + G+GTYY + GNC + D P +YSGM P ALNA QYGDSLMCG+C+EG +G G G P TFKGFI D+CPEC GDLD DGRWDIEW+FV CPGE +SFK PY+WKIQP+GT TPVES+ I G+ ART DNHFELE G PW Q V TTTV GV +E+S+
Sbjct: 67 RLAAALLVCATPVA---SLETSLRGAE-VAAAAG-GARRGLSGSSYESYEHLGCYVDNGMVNSSPHLPLVLDAMTNELCYDRCHELGAFFMGTQKGNECRCSREEDLDYFSFESGVCDEPCAGDSTETCGGDLTLDLYKLTPADEPDHEEYEGCWSDLGESRVMQDMLVDESMTTDMCRDHCESSDAVYYATQYGNECFCGYSSDPEDYETHGPGTCHMHCAGDSGSACGGYWAFSLFKFGADGMPDPAVPDVSEPPSEPAPEPVVSTPAPSMSEAESKTP----------------------------------------------------------------------------------------------------------------ISGGVYGTTFEGDGTYYTGISAGNCGFFDDFPSIYSGMTPVALNAAQYGDSLMCGSCVEGEGTGGGGGDNPI-GTFKGFIMDKCPECHEGDLDFGTGLDGRWDIEWRFVACPGEEVSFKVVEMTPYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGNPWYEPQMVVTTTVGGVVEETEMSV 530
BLAST of mRNA_H-canaliculatus_F_contig1500.3770.1 vs. uniprot
Match: D8LRN1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LRN1_ECTSI) HSP 1 Score: 283 bits (724), Expect = 2.090e-83 Identity = 129/188 (68.62%), Postives = 148/188 (78.72%), Query Frame = 1
Query: 1396 FSGGQYGTEYSGEGTYYGETTEGNCAYGGDVPGMYSGMIPFALNAPQYGDSLMCGACLEGTASGVGEGATPFPSTFKGFITDQCPECASGDLDMSVSGDGRWDIEWKFVPCPGETISFKFEGSNPYFWKIQPQGTETPVESVRINGQRMARTLDNHFEL--EGGPWEGSQTVETTTVAGVTRTSEVSL 1953
+SGGQYG EYSGEGTYYG TT G C++ DVP MY GMIP ALNA QYGDSLMCGAC+EGTASG G G P PSTFK FITD+CPEC GDLD S+SGDGRWDIEWKFV CPGE SF +NPY+WK+QP+GT TPV S+ ++GQ RT DNHFE+ +G W G+QTV TTTV+GVT T+EVS+
Sbjct: 99 YSGGQYGEEYSGEGTYYGHTTAGMCSFFDDVPEMYDGMIPVALNAEQYGDSLMCGACVEGTASGSGSGNNPIPSTFKAFITDKCPECQKGDLDFSMSGDGRWDIEWKFVACPGEETSFVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEVHNDGAAWSGAQTVVTTTVSGVTETAEVSV 286
BLAST of mRNA_H-canaliculatus_F_contig1500.3770.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI) HSP 1 Score: 239 bits (609), Expect = 1.940e-60 Identity = 116/211 (54.98%), Postives = 142/211 (67.30%), Query Frame = 1
Query: 388 GLTEAYEHVGCFADNSNERVL-KSPLWSDNMTAELCYERCHQLGAHYMSTQYGKECWCSRLEDLDYQQHG-FGLCDMECSGDAEETCGGFDAFDLYRLVPGDVPTSEEYVGCFVDTE-ERVMTHMIVESDMTPVSCRSHCESTGAKYFATQYGNECFCGTSDVASDYEVNGEGTCHIPCYGDDSVACGGYWAFSLFKFADRSEPAATPEPV 1011
G AYEHVGCF D+ ++RVL +S L S +MTAELCYE C GA YM+TQ+G ECWCSR LDY +HG G+CD C GD ETCGG +F+LYRL P EEYVGC+ D + +RV++ MI DMT CR HC A Y+ TQ+ +EC+CGTSD +DYE +GEG CH+ C GD +VACGGY A+SLFK+ D A T PV
Sbjct: 1140 GRPGAYEHVGCFQDSQSDRVLQRSGLISGDMTAELCYETCSTKGAAYMATQWGVECWCSRDGSLDYDRHGDTGVCDYPCRGDESETCGGVHSFNLYRLSWAPAPEDEEYVGCYTDNKGDRVLSDMISSDDMTAAVCREHCADKDAPYYGTQFSSECWCGTSDDDADYERHGEGVCHMACSGDGTVACGGYDAYSLFKY-DNGGEAPTTAPV 1349
BLAST of mRNA_H-canaliculatus_F_contig1500.3770.1 vs. uniprot
Match: D8LHU1_ECTSI (Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHU1_ECTSI) HSP 1 Score: 210 bits (534), Expect = 3.180e-58 Identity = 98/184 (53.26%), Postives = 120/184 (65.22%), Query Frame = 1
Query: 1411 YGTEYSGEGTYYGETTEG--NCAYGGDVPGMYSGMIPFALNAPQYGDSLMCGACLEGTASGVGEGATPFPSTFKGFITDQCPECASGDLDMSVSGDGRWDIEWKFVPCPGETI-SFKFEGSNPYFWKIQPQGTETPVESVRINGQRMARTLDNHFELEGGPWEGSQTVETTTVAGVTRTSEVSL 1953
Y ++SG+ TYYG T +G NCA +P MY GMIP ALN QY DS MCGAC+EG G GEG P FK ++TD+CPEC GDLD + GDGRWDI W FVPC G + +F FEGSN ++WKIQP+G +PVE + ING R+ DN F LEGGP++G Q V T TV R V++
Sbjct: 37 YDEQFSGDATYYGVTPDGDGNCAIRSPLPEMYDGMIPVALNDEQYADSYMCGACIEGEGFGEGEGRDPVEGAFKAYVTDRCPECLFGDLDFAADGDGRWDISWHFVPCEGGSDQTFLFEGSNEFYWKIQPRGGRSPVERLWINGDEAERSEDNFFILEGGPFDGEQEVHTKTVLNKRRRQSVAM 220
BLAST of mRNA_H-canaliculatus_F_contig1500.3770.1 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI) HSP 1 Score: 214 bits (546), Expect = 1.020e-53 Identity = 99/204 (48.53%), Postives = 134/204 (65.69%), Query Frame = 1
Query: 391 LTEAYEHVGCFADNSNERVLKSPLWSDNMTAELCYERCHQLGAHYMSTQYGKECWCSRLEDLDYQQHGFGLCDMECSGDAEETCGGFDAFDLYRLVPGDVPTSEEYVGCFVDT-EERVMTHMI-VESDMTPVSCRSHCESTGAKYFATQYGNECFCGTSDVASDYEVNGEGTCHIPCYGDDSVACGGYWAFSLFKFADRSEPAA 996
+ E Y +VGCFAD+ +RV + S MT +C E C A YM+TQYG ECWCS +++Y +H G+CD C GDA + CGGFDAFDLY++ PT +EYVGCF D E+R++ I ++ DMT CR++CE A ++ATQYG+EC+CG S+ DY+ +G G+C C GD +VACGG+ AF+LFKF +EP A
Sbjct: 429 VDEGYSYVGCFADSKEDRVFEYMKTSSTMTTAVCLEYCLDRRATYMATQYGYECWCSVDAEVEYDRHSDGVCDHACGGDAADICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQAVCRTYCEERDAYFYATQYGDECWCGMSNDEEDYKRHGRGSCLAGCSGDPTVACGGFDAFNLFKFDGIAEPIA 632
BLAST of mRNA_H-canaliculatus_F_contig1500.3770.1 vs. uniprot
Match: D7FXK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK6_ECTSI) HSP 1 Score: 207 bits (527), Expect = 3.060e-53 Identity = 103/233 (44.21%), Postives = 142/233 (60.94%), Query Frame = 1
Query: 334 SLRGAQQVESFRGTGVRRGLTEAYEHVGCFADNSNERVLKSPLWSDNMTAELCYERCHQLGAHYMSTQYGKECWCSRLEDLDYQQHG------FGLCDMECSGDAEETCGGFDAFDLYRLVPGDVPT-SEEYVGCFVDTEE-RVMTHMI-VESDMTPVSCRSHCESTGAKYFATQYGNECFCGTSDVASDYEVNGEGTCHIPCYGDDSVACGGYWAFSLFKFADRSEPAATPE 1005
S R ++ GV+ + YEH+GCFADN +RVL + S MT+ +C E C A YM+ QYG ECWCSR +LDY +H LCD+ C G ETCGG AFDLY+L G +P+ S EYVGCF D +E R + + I + +MT CR +CE G+ ++ATQYG+EC+CG +D +Y+ +G+G C C+GD ++ACGGY+AFSLF++ D + E
Sbjct: 291 SSRKSRPCRKRNNDGVKAEFSLEYEHIGCFADNKTDRVLGHLMKSPLMTSAMCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHSGTDKGDADLCDLSCYGCDAETCGGLYAFDLYKL-DGPMPSDSREYVGCFADDQEDRALANKIKFQDNMTQDVCRVYCERFGSSFYATQYGDECWCGATDDVEEYKRHGDGECIAGCFGDPAIACGGYYAFSLFEYLDDDDDETATE 522
BLAST of mRNA_H-canaliculatus_F_contig1500.3770.1 vs. uniprot
Match: F2Z7J0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis andersonii TaxID=408198 RepID=F2Z7J0_9FLOR) HSP 1 Score: 198 bits (503), Expect = 3.310e-53 Identity = 90/175 (51.43%), Postives = 118/175 (67.43%), Query Frame = 1
Query: 1399 SGGQYGTEYSGEGTYYGETTEGNCAYGGDVPGMYSGMIPFALNAPQYGDSLMCGACLEGTASGVGEGATPFPSTFKGFITDQCPECASGDLDMSVSGDGRWDIEWKFVPCPGETISFKFEGSNPYFWKIQPQGTETPVESVRINGQRMARTLDNHFELE-GGPWEGSQTVETTTV 1920
S G Y + G+GTYYG TT GNCA +PGMYSGM+P A+N QY +S CGACL T G G GA P TFK ++ D+CPEC GD+D+S SGDGRW ++W+F+PCPGE + F FEGSN ++ K+QP+G +TPV +NGQ+ +T DN + L+ GG + TV+ TV
Sbjct: 16 SPGDYRRTFFGDGTYYGYTTRGNCAIRSPLPGMYSGMVPVAINNAQYEESKSCGACLLVTGYGQGSGANPVVGTFKAYVHDRCPECKYGDIDLSKSGDGRWKVQWRFIPCPGEWVFFLFEGSNRFYLKLQPRGLKTPVTYFSVNGQQGTKTQDNFYILQNGGGFRYPLTVQMRTV 190
BLAST of mRNA_H-canaliculatus_F_contig1500.3770.1 vs. uniprot
Match: A0A6H5JMV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV6_9PHAE) HSP 1 Score: 201 bits (510), Expect = 7.700e-52 Identity = 100/231 (43.29%), Postives = 138/231 (59.74%), Query Frame = 1
Query: 397 EAYEHVGCFADNSNERVLKSPLWSDNMTAELCYERCHQLGAHYMSTQYGKECWCSRLEDLDYQQHGFGLCDMECSGDAEETCGGFDAFDLYRLVPGDVPTSEEYVGCFVDT-EERVMTHMI-VESDMTPVSCRSHCESTGAKYFATQYGNECFCGTSDVASDYEVNGEGTCHIPCYGDDSVACG------------------------GYWAFSLFKFADRSEPAA-TPEP 1008
E Y +VGCFAD+ ++RV + S MT +C E C A +M+TQ+G ECWCS +++Y +H G+CD EC G+A + CGGFDAFDLY++ PT +EYVGCF D E+R++ I ++ DMT CR++CE A ++ATQYG+EC+CG S+ DY+ +G G+C C GD +VACG G+ AF+LFKF +EP A TP P
Sbjct: 9 EGYSYVGCFADSKDDRVFEYMKTSPTMTTAVCLEYCLDRRATFMATQFGIECWCSVDAEIEYDRHSDGVCDCECGGEATDICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQTVCRTYCEERDAYFYATQYGDECWCGMSEDEQDYKRHGRGSCLAGCSGDPTVACGRDFQVVIYKHESFQPFLAVTLVPGGFDAFNLFKFDGVAEPVAPTPGP 239
BLAST of mRNA_H-canaliculatus_F_contig1500.3770.1 vs. uniprot
Match: D8LED9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED9_ECTSI) HSP 1 Score: 202 bits (513), Expect = 2.760e-51 Identity = 93/193 (48.19%), Postives = 123/193 (63.73%), Query Frame = 1
Query: 400 AYEHVGCFADNSNERVLKSPLWSDNMTAELCYERCHQLGAHYMSTQYGKECWCSRLEDLDYQQHGFGLCDMECSGDAEETCGGFDAFDLYRLVPGDVPTSEEYVGCFVDTEERVMTHMIVES--DMTPVSCRSHCESTGAKYFATQYGNECFCGTSDVASDYEVNGEGTCHIPCYGDDSVACGGYWAFSLFKF 972
+Y +VGCFADN ++RV + S MT +C E C + A YM+TQYG ECWCS + +Y +H G+CD C GD + CGGFDAFDLY++ PT +EYVGCF D E + ++S DMT CR++CE A ++ATQ G EC+CG S+ DY +G G+C C GD +VACGG+ AF+LFKF
Sbjct: 399 SYSYVGCFADNKHDRVFEYMRTSFTMTTAVCLEYCLERRATYMATQYGIECWCSVDAETEYDRHSDGVCDHACGGDEADYCGGFDAFDLYKITEPREPTGDEYVGCFADNPEDWVLGGEIKSQPDMTQAVCRTYCEDLDANFYATQNGEECWCGMSEEEEDYTRSGRGSCLAGCSGDPAVACGGFNAFNLFKF 591 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1500.3770.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1500.3770.1 >prot_H-canaliculatus_F_contig1500.3770.1 ID=prot_H-canaliculatus_F_contig1500.3770.1|Name=mRNA_H-canaliculatus_F_contig1500.3770.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=624bp MSKSRWDGISTPPLSNGRRAEIHSLFVPPPPPNPPLHSLSPIIHATSLLLback to top mRNA from alignment at H-canaliculatus_F_contig1500:852..11689- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1500.3770.1 ID=mRNA_H-canaliculatus_F_contig1500.3770.1|Name=mRNA_H-canaliculatus_F_contig1500.3770.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=10838bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1500:852..11689- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1500:852..11689- >mRNA_H-canaliculatus_F_contig1500.3770.1 ID=mRNA_H-canaliculatus_F_contig1500.3770.1|Name=mRNA_H-canaliculatus_F_contig1500.3770.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3744bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1500:852..11689- (Hapterophycus canaliculatus Oshoro5f female)back to top |