mRNA_H-canaliculatus_F_contig1492.3710.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1492.3710.1
Unique NamemRNA_H-canaliculatus_F_contig1492.3710.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1492.3710.1 vs. uniprot
Match: D7FTE1_ECTSI (Tocopherol phytyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTE1_ECTSI)

HSP 1 Score: 510 bits (1313), Expect = 1.940e-168
Identity = 276/375 (73.60%), Postives = 300/375 (80.00%), Query Frame = 2
Query:  107 SSLGVSSPVEGKNATTAAGYGGGREGVTLGTLAVDEAGGDGGGSGSGAPRAVQQSFLKTLWEFSRPHTMIGTAIAIPAIGLFAGPPGVLPGRRYLLSMIWALVPSLLINVYITGLNQITDVEIDKVNKPYLPIPAGNLTPRAAKATVTLCLLAGTVLGLAPSRLGSPGLALTVVLSVLIGTSYSLPPLRLKRFPQVAALCILVVRGSIINGGFYSHAQMAGYGLSTDKTALWALSLPFRDAKCALALAYFTVFAVVIALMKDVPDVAGDRKFNIPSFSVVLGEAKLFAFARRLLTALLWSTSAALGLSARAAAAAGLPWTAGGRAAVATAALFTGQSIRRRAAKVNPEDPTEVYGFYMVLWKVFYLSYLFLPLAR 1231
            SS GVSSPV G++AT         EGV  G   V   G  G G G       +QS LKTLWEFSRPHTMIGTA+AIPAIG+FAGPPGVLPGRR+ LSM+WA+VPSLLINVYITGLNQITDVEIDK+NKPYLPIPAGNLT RAAK TVTLCLLAG VLGLAP  LGSPGLA               PP RLKRFPQVAALCILVVRGSIINGGFYSHAQ+AGYGLS +KTALWAL+LPFRDAKCALALAYFTVFAVVIALMKDVPDV GDR FNIPSFSVVLGE KLFAFARRLLTALLWST+  LG+ A+AAA+A LP T+G R  ++  AL  GQ +RRRAA V+P+ P +VY FYM LWK+FYLSYLFLPLAR
Sbjct:   14 SSSGVSSPVGGRDAT---------EGVA-GEKEVGGGGLSGDGDGGVTVSKTKQSLLKTLWEFSRPHTMIGTAVAIPAIGVFAGPPGVLPGRRFFLSMLWAMVPSLLINVYITGLNQITDVEIDKINKPYLPIPAGNLTSRAAKLTVTLCLLAGAVLGLAPCSLGSPGLAXXXXXXXXXXXXXXXPPFRLKRFPQVAALCILVVRGSIINGGFYSHAQLAGYGLSREKTALWALTLPFRDAKCALALAYFTVFAVVIALMKDVPDVEGDRMFNIPSFSVVLGETKLFAFARRLLTALLWSTAGVLGVGAKAAASASLPLTSGLRGLMSAVALIAGQLVRRRAAGVDPKQPKQVYDFYMDLWKLFYLSYLFLPLAR 378          
BLAST of mRNA_H-canaliculatus_F_contig1492.3710.1 vs. uniprot
Match: A0A6H5JCM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM7_9PHAE)

HSP 1 Score: 495 bits (1275), Expect = 3.820e-161
Identity = 274/382 (71.73%), Postives = 295/382 (77.23%), Query Frame = 2
Query:  107 SSLGVSSPVEGKNATTAAGYGGGREGVTLGTLAVDEAGGDGGGSGSGAPRAV-------QQSFLKTLWEFSRPHTMIGTAIAIPAIGLFAGPPGVLPGRRYLLSMIWALVPSLLINVYITGLNQITDVEIDKVNKPYLPIPAGNLTPRAAKATVTLCLLAGTVLGLAPSRLGSPGLALTVVLSVLIGTSYSLPPLRLKRFPQVAALCILVVRGSIINGGFYSHAQMAGYGLSTDKTALWALSLPFRDAKCALALAYFTVFAVVIALMKDVPDVAGDRKFNIPSFSVVLGEAKLFAFARRLLTALLWSTSAALGLSARAAAAAGLPWTAGGRAAVATAALFTGQSIRRRAAKVNPEDPTEVYGFYMVLWKVFYLSYLFLPLAR 1231
            SS GVSSP  G++              T       E GGDG   G              +QS  KTLWEFSRPHTMIGTA+AIPAIG+FAGPPGVLPGRR+ LSM+WA+VPSLLINVYITGLNQITDVEIDKVNKPYLPIPAGNLT RAAK TVTLCLLAG VLGLAP  LGSPGLA                 LRLKRFPQVAALCILVVRGSIINGGFYSHAQ+AGYGLS +KTALW L+LPFRDAKCALALAYFTVFAVVIALMKDVPDVAGDR FNIPSFSVVLGE KLFAFARRLLTALLWST+AALG+ A+AAA+A LP T+G    V+  AL TGQ +RRRAA V+PE P +VY FYM LWK+FYLSYLFLPLAR
Sbjct:  121 SSSGVSSPAGGRD-------------TTEDVAGETEVGGDGLSGGXXXXXXXXXSVSKKKQSLFKTLWEFSRPHTMIGTAVAIPAIGVFAGPPGVLPGRRFFLSMLWAVVPSLLINVYITGLNQITDVEIDKVNKPYLPIPAGNLTSRAAKLTVTLCLLAGAVLGLAPCSLGSPGLAXXXXXXXXXXXXXXXXXLRLKRFPQVAALCILVVRGSIINGGFYSHAQLAGYGLSGEKTALWTLTLPFRDAKCALALAYFTVFAVVIALMKDVPDVAGDRMFNIPSFSVVLGEIKLFAFARRLLTALLWSTAAALGVGAKAAASASLPLTSG---LVSALALITGQLMRRRAAGVDPEQPKQVYDFYMDLWKIFYLSYLFLPLAR 486          
BLAST of mRNA_H-canaliculatus_F_contig1492.3710.1 vs. uniprot
Match: A0A835ZGZ5_9STRA (Tocopherol phytyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGZ5_9STRA)

HSP 1 Score: 300 bits (767), Expect = 1.150e-88
Identity = 175/338 (51.78%), Postives = 224/338 (66.27%), Query Frame = 2
Query:  269 SFLKTLWEFSRPHTMIGTAIAIPAIGLFA-GPPGVLPGRRYLLSMIWA-LVPSLLINVYITGLNQITDVEIDKVNKPYLPIPAGNLTPRAAKATVTLCLLAGTVLG-LAPSRLGSPGLALTVVLSVLIGTSYSLPPLRLKRFPQVAALCILVVRGSIINGGFYSHAQMAGYGL-----------STDKTALWALSLPFRDAKCALALAYFTVFAVVIALMKDVPDVAGDRKFNIPSFSVVLGEAKLFAFARRLLTALLWSTSAALGLSA-RAAAAAGLP--WTAGGRAAVATAALFTGQSIRRRAAKVNPEDPTEVYGFYMVLWKVFYLSYLFLPLAR 1231
            SFL+ +++FSRPHT+IG+A++IPAI +FA G P  LP  R L +++ A +VPSLLIN++ITGLNQITDVEID+VNKP LPI AG L+ RAA ATVT CL+ G  LG L P+ L S  L   +V S L+G  YSLPP+RLKRFP +AA+CIL VRG+++N  FY+H  +    L           S          LP RDA+C L + +F VF VVIAL+KDVPD  GD + NI SF+V +G  ++FA A  L+ ALLW T AA+  +A RAA+AAG P  W  G RAA+   A   G+++  +   VNP DP +VY FYM LW +FY SYL LP  R
Sbjct:   32 SFLRVIYDFSRPHTLIGSALSIPAIAIFATGLPASLPAARQLTALVLAAMVPSLLINIHITGLNQITDVEIDRVNKPELPIAAGRLSMRAAIATVTACLVGGVGLGYLMPAALTSHALQGVIVGSTLLGGMYSLPPIRLKRFPLLAAMCILSVRGAVMNACFYAHFALKSGALXXXXXXXLSPPSLTSGIRDVCLLPLRDARCGLLVGFFAVFGVVIALLKDVPDFKGDAQHNIRSFTVRMGRERVFAAASNLMIALLWGTGAAMAAAAVRAASAAGTPLSWVVGARAALXXVAGAAGRTVLLKRRAVNPTDPKQVYKFYMFLWGLFYTSYLCLPFVR 369          
BLAST of mRNA_H-canaliculatus_F_contig1492.3710.1 vs. uniprot
Match: A0A448ZLS0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZLS0_9STRA)

HSP 1 Score: 293 bits (751), Expect = 1.390e-85
Identity = 165/320 (51.56%), Postives = 211/320 (65.94%), Query Frame = 2
Query:  275 LKTLWEFSRPHTMIGTAIAIPAIGLFAGPP-GVLPGRRYLLSMIWALVPSLLINVYITGLNQITDVEIDKVNKPYLPIPAGNLTPRAAKATVTLCLLAGTVLGLAPSRLGSPGLALTVVLSVLIGTSYSLPPLRLKRFPQVAALCILVVRGSIINGGFYSHAQMAGYGLSTDKTALWALSLPFRDAKCALALAYFTVFAVVIALMKDVPDVAGDRKFNIPSFSVVLGEAKLFAFARRLLTALLWSTSAALGLSARAAAAAGLPWTAGGRAAVATAALFTGQSIRRRAAKVNPEDPTEVYGFYMVLWKVFYLSYLFLPLAR 1231
            L  LW F+RPHT+IG+A+AIPA+ L A P  G     R L SM++A+VPSLL+N+YITGLNQ+TDVEIDK+NKP LPI +G+L+ + A+  V   L+    LG +   L + GL + + +S ++GT YSLPP R KRFP +AA CI+ VRG++IN GF++HA  A YG S   + L  L+    D +C L+  YF VF +VIALMKDVPDV GD   NI + SV LG + ++    RLLT L W    A    A AA A+       GRA V  AAL  G S+RR A+ V+P +P EVYGFYM LWK+FYLSYLFLP AR
Sbjct:  116 LSVLWRFTRPHTIIGSALAIPALHLLAAPTYGTALTARSLSSMLYAMVPSLLMNLYITGLNQVTDVEIDKINKPDLPIASGDLSVKDARLLVVGSLVLSLALGASVPALATEGLGVALGVSAVLGTVYSLPPFRFKRFPLLAAFCIVAVRGAVINAGFFAHAHAAAYGGSGRGSVLGCLA---GDLRCGLSSLYFAVFGLVIALMKDVPDVEGDALSNIRTASVRLGPSAVYQAMHRLLTGLFWGVGLAFFRGALAAPASAA--VRSGRALVGAAALLAGASVRREASPVDPHNPREVYGFYMHLWKLFYLSYLFLPFAR 430          
BLAST of mRNA_H-canaliculatus_F_contig1492.3710.1 vs. uniprot
Match: B7G488_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G488_PHATC)

HSP 1 Score: 279 bits (714), Expect = 1.040e-80
Identity = 158/321 (49.22%), Postives = 209/321 (65.11%), Query Frame = 2
Query:  272 FLKTLWEFSRPHTMIGTAIAIPAIGLFAGPP-GVLPGRRYLLSMIWALVPSLLINVYITGLNQITDVEIDKVNKPYLPIPAGNLTPRAAKATVTLCLLAGTVLGLAPSRLGSPGLALTVVLSVLIGTSYSLPPLRLKRFPQVAALCILVVRGSIINGGFYSHAQMAGYGLSTDKTALWALSLPFRDAKCALALAYFTVFAVVIALMKDVPDVAGDRKFNIPSFSVVLGEAKLFAFARRLLTALLWSTSAALGLSARAAAAAGLPWTAGGRAAVATAALFTGQSIRRRAAKVNPEDPTEVYGFYMVLWKVFYLSYLFLPLAR 1231
            F   LW FSRPHT+IG+A+AIPA+   A P       R  + +M +A+ P+LL+N+YITGLNQITDVEIDK+NKP+LPI AG L+ +   AT+ L L     LG A     + GL + +  S ++GT YSLPP RLKRFP +AA CI+ VRG+IIN  F++HA+ A +G S     +  L+    D +C L+  +F VF +VIALMKDVPDVAGDR  N+ +FSV LG+ ++F  +RRLL+ L W+     G +A  A  AGL   A  R+  A AA   G S+R+ A  V+PE+  +VY +YM LWK+FYLSYL LP AR
Sbjct:   91 FPIVLWRFSRPHTLIGSALAIPALHSLAAPSLQAAMSRINIQAMAYAMFPALLMNIYITGLNQITDVEIDKINKPFLPIAAGILSKKDGIATILLALFGSLWLGAANPVFSTQGLNVALWGSGILGTMYSLPPFRLKRFPLLAAFCIVAVRGAIINASFFAHAKAAAFGGS----GVTVLNCLATDPRCYLSSIFFAVFGIVIALMKDVPDVAGDRNSNVRTFSVRLGQGRIFQASRRLLSGLFWTVGVGFGKAAFQAPTAGL---AASRSLTAVAAFLGGCSVRKDAQGVDPENAGQVYSYYMHLWKLFYLSYLVLPFAR 404          
BLAST of mRNA_H-canaliculatus_F_contig1492.3710.1 vs. uniprot
Match: A0A7R9W9M6_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W9M6_9STRA)

HSP 1 Score: 274 bits (701), Expect = 4.970e-79
Identity = 158/331 (47.73%), Postives = 212/331 (64.05%), Query Frame = 2
Query:  242 SGAPRAVQQSFLKTLWEFSRPHTMIGTAIAIPAIGLFAGPP-GVLPGRRYLLSMIWALVPSLLINVYITGLNQITDVEIDKVNKPYLPIPAGNLTPRAAKATVTLCLLAGTVLGLAPSRLGSPGLALTVVLSVLIGTSYSLPPLRLKRFPQVAALCILVVRGSIINGGFYSHAQMAGYGLSTDKTALWALSLPFRDAKCALALAYFTVFAVVIALMKDVPDVAGDRKFNIPSFSVVLGEAKLFAFARRLLTALLWSTSAALGLSARAAAAAGLPWTAGGRAAVATAALFTGQSIRRRAAKVNPEDPTEVYGFYMVLWKVFYLSYLFLPLAR 1231
            +G+    +  FL  LW F+RPHT+IG+A+A+PA+ L A P           +++++A++PSLL+N+YITGLNQITDVEID++NKP LPI  G+L+P+AA   V         +G A   LGS GL + +  S L+GT+YSLPP+RLKR P +AALCI+ VRG +IN GF++HA+ A +G++   T    L     D +C L+  +F VF +VIALMKDVPDV GD + NI SFSV +G+  +F   RRLL  L ++  A    SA AA A   P     RA V  A+   G S+R  A  V+PED  +VY +YM LWK+FYLSYL LP AR
Sbjct:   67 NGSSSEKKPPFLLVLWRFTRPHTIIGSALAVPALHLLAAPSFSDAFTVTNAVALVYAMIPSLLMNLYITGLNQITDVEIDRINKPNLPIAKGDLSPKAAVMVVAXXXXXXXXMGAAHPVLGSQGLNVALWGSALLGTAYSLPPIRLKRHPLMAALCIVAVRGVVINAGFFAHARSAAFGVNGG-TVTSVLGCLTTDPRCLLSSLFFGVFGIVIALMKDVPDVGGDEEHNIRSFSVRVGQKGVFKSMRRLLMGLFFAFGAGFLRSATAATA---PALRACRAGVGLASFALGLSVREEAQPVDPEDSQQVYEYYMHLWKLFYLSYLVLPFAR 393          
BLAST of mRNA_H-canaliculatus_F_contig1492.3710.1 vs. uniprot
Match: A0A7S3P573_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P573_9STRA)

HSP 1 Score: 275 bits (704), Expect = 9.230e-79
Identity = 160/321 (49.84%), Postives = 211/321 (65.73%), Query Frame = 2
Query:  272 FLKTLWEFSRPHTMIGTAIAIPAIGLFAGPP-GVLPGRRYLLSMIWALVPSLLINVYITGLNQITDVEIDKVNKPYLPIPAGNLTPRAAKATVTLCLLAGTVLGLAPSRLGSPGLALTVVLSVLIGTSYSLPPLRLKRFPQVAALCILVVRGSIINGGFYSHAQMAGYGLSTDKTALWALSLPFRDAKCALALAYFTVFAVVIALMKDVPDVAGDRKFNIPSFSVVLGEAKLFAFARRLLTALLWSTSAALGLSARAAAAAGLPWTAGGRAAVATAALFTGQSIRRRAAKVNPEDPTEVYGFYMVLWKVFYLSYLFLPLAR 1231
            F K LW+FSRPHT+IG+A+AIP++ L A P   +      L++ + A++P+ L+N+YITGLNQITDVEIDKVNKPYLPI AG LT + A  TV L L+A   +GL+    G+ GL + +  S ++GT YSL P R KRFP +AA CI+ VRG+IIN  FY+HA+ +  G S   T L  L+    D  C L+  +F VF +VIALMKDVPDV GDR  N+ +FSV LG+A++F   RRLL+ L W+ SAA    A  A +      A  R   A A+ + G S+R+ +  VNPED  +VY +YM LWK+FY+SYL LP AR
Sbjct:  134 FYKVLWKFSRPHTIIGSALAIPSLHLLASPTLAIALSVPNLVACVAAMIPACLMNLYITGLNQITDVEIDKVNKPYLPIAAGLLTMKDAIVTVVLALVASLAMGLS---YGTQGLNVALWGSAILGTIYSLEPFRFKRFPVLAAFCIVAVRGAIINASFYAHAKASVLG-SPVATVLGCLA---TDRACFLSSLFFGVFGLVIALMKDVPDVVGDRLANVKTFSVRLGQAQVFTGMRRLLSGLFWAVSAAFVNQAVRAFSNSSMGLAACRLVTAAASAWAGWSVRQESQSVNPEDSDQVYSYYMHLWKLFYMSYLVLPFAR 447          
BLAST of mRNA_H-canaliculatus_F_contig1492.3710.1 vs. uniprot
Match: A0A7S2R0V2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0V2_9STRA)

HSP 1 Score: 270 bits (689), Expect = 5.160e-78
Identity = 153/324 (47.22%), Postives = 210/324 (64.81%), Query Frame = 2
Query:  272 FLKTLWEFSRPHTMIGTAIAIPAIGLFAGPPGVLPGRRYLL-SMIWALVPSLLINVYITGLNQITDVEIDKVNKPYLPIPAGNLTPRAAKATVTLCLLAGTVLGLAPSRLGSPGLALTVVLSVLIGTSYSLPPLRLKRFPQVAALCILVVRGSIINGGFYSHAQMAGYGLSTDKTALWALSLPFRDAKCALALAYFTVFAVVIALMKDVPDVAGDRKFNIPSFSVVLGEAKLFAFARRLLTALLWSTSAALGLSARAAAAAGL---PWTAGGRAAVATAALFTGQSIRRRAAKVNPEDPTEVYGFYMVLWKVFYLSYLFLPLAR 1231
            F K LW F+RPHT+IG+A+AIPA+ LFA P      +  +L S+++A+ PSLL+N+YITGLNQITDV+IDKVNKP LP+ +G+L+P AA   V++ LL     G++   LG+ GL + +  S+L+GT YSLPP RLKRFP +AA CI+ VRG++IN GF++HAQ A +G S   T +W  +    D +C L+  +F VF +VIALMKDVPD  GD  FNI SF+V  G   +F   RRLLT    +  A    SA  A ++           R  V+ +++  G S+ +R+  V+PE+ T+ Y +YM LWK+FYLSY  LP  R
Sbjct:   22 FWKVLWRFTRPHTIIGSAMAIPALHLFAAPTFQAAFQPAVLRSIVFAMFPSLLMNLYITGLNQITDVDIDKVNKPQLPMASGDLSPTAANWIVSISLLVSLAWGMSHPVLGTQGLNVALWGSMLLGTLYSLPPFRLKRFPFLAAFCIVSVRGAVINAGFFAHAQAAAFGGSIATTTVW--NCLCSDPRCLLSSLFFAVFGLVIALMKDVPDYTGDALFNIRSFTVRAGPKTIFHSMRRLLTTAFLAVGAIFARSAFQALSSNNNNPTLLMASRILVSASSIAAGISVHKRSNNVDPENSTQTYSYYMHLWKLFYLSYFVLPFVR 343          
BLAST of mRNA_H-canaliculatus_F_contig1492.3710.1 vs. uniprot
Match: A0A1E7F9X4_9STRA (Homogentisate phytyltransferase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F9X4_9STRA)

HSP 1 Score: 273 bits (698), Expect = 1.650e-77
Identity = 158/338 (46.75%), Postives = 213/338 (63.02%), Query Frame = 2
Query:  263 QQSFLKTLWEFSRPHTMIGTAIAIPAIGLFAGPPGVLPGRRY--------LLSMIWALVPSLLINVYITGLNQITDVEIDKVNKPYLPIPAGNLTPRAAKATVTLCLLAGTVLGLAPSRLGSPGLALTVVLSVLIGTSYSLPPLRLKRFPQVAALCILVVRGSIINGGFYSHAQMAGYGLSTDKTALWALSLPFRDAKCALALAYFTVFAVVIALMKDVPDVAGDRKFNIPSFSVVLGEAKLFAFARRLLTALLWSTSAALGLSARAAAAAGLPWTAG-------GRAAVATAALFTGQSIRRRAAKVNPEDPTEVYGFYMVLWKVFYLSYLFLPLAR 1231
            ++SF+  LW F+RPHT+IG+A+AIPA+ + A          Y        +LS+++A +P+LL+N+YITG+NQITDVEIDK+NKP LPI AG+L+ + A   V + LL   VLG++   L + GL + + +S ++GT YSLPP RLKRFP +AA CI+ VRG +IN GF++HA++A +G S        L     D +C L+  YF VF VVIAL+KDVPDV GD   NI + +V LG   +F    RLLT L W    A     RAA       T+        GR  V  +AL  G S+++ AA V+P++PTEVYGFYM LWK+FYLSY  LP+AR
Sbjct:  159 KKSFMSVLWRFTRPHTIIGSALAIPALHMLAA-------TTYRDAFTVKTVLSILYATIPALLMNLYITGVNQITDVEIDKINKPDLPIAAGDLSMKNATIIVLVSLLLSVVLGVSIPSLTTSGLTMALGVSAVLGTVYSLPPFRLKRFPVLAAFCIVAVRGGVINAGFFAHAKVAAFGGSGS-----ILHYLLTDPRCYLSSLYFAVFGVVIALIKDVPDVKGDNLSNIRTVAVRLGPNSVFRGMHRLLTTLFWGVGIAF---FRAAVITSSTSTSSSTMMVRLGRIIVGISALVAGASVQKEAAPVDPDNPTEVYGFYMHLWKLFYLSYFVLPIAR 481          
BLAST of mRNA_H-canaliculatus_F_contig1492.3710.1 vs. uniprot
Match: A0A7S2CJS5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CJS5_9STRA)

HSP 1 Score: 269 bits (688), Expect = 2.990e-77
Identity = 166/333 (49.85%), Postives = 205/333 (61.56%), Query Frame = 2
Query:  284 LWEFSRPHTMIGTAIAIPAIGLFAGPPGV-LPGRRYLLSMIWALVPSLLINVYITGLNQITDVEIDKVNKPYLPIPAGNLTPRAAKATVTLCLLAGTVLGLAPSRLGSPGLALTVVLSVLIGTSYSLPPLRLKRFPQVAALCILVVRGSIINGGFYSHAQMAGYGLSTDKTALWALS----------LPFRDAKCALALAYFTVFAVVIALMKDVPDVAGDRKFNIPSFSVVLGEAKLFAFARRLLTALLWSTSAALGLSARAAAAAGLPWTAGG------RAAVATAALFTGQSIRRRAAKVNPEDPTEVYGFYMVLWKVFYLSYLFLPLAR 1231
            LWEF+RPHT+IG+A+ +PAI  FA P G  L   R   S +WAL+P+L IN+YITGLNQITDVEID+VNKPYLP+ AG+LT   AK  V L LLAG  LG        P L +T+VLS LIGT YSL P RLKRFP  AALCIL VRG++IN GFY HA      L  D TA  AL+          LPF  AKC LA  +F +F  VIALMKDVPDV GD+ + I S +V LG  ++F  AR  L  L+  T  AL     AA  A L ++ G       R  V  ++L   ++++  + +V+  D  +VY FYM +WKVFY SY+ LP  R
Sbjct:   67 LWEFTRPHTLIGSALCVPAIHAFAIPSGAPLFTARLFQSCVWALIPALFINIYITGLNQITDVEIDRVNKPYLPLAAGHLTMPEAKWVVGLSLLAGLALGFLHPCSTFP-LRMTLVLSALIGTFYSLEPFRLKRFPFFAALCILTVRGAVINIGFYGHAVQ---NLGLDVTAQNALASPVIRKILSTLPFESAKCGLATLFFALFGTVIALMKDVPDVVGDKLYGIKSLTVRLGPERVFTIARDALCLLMGVTGGAL-----AATGALLVFSQGVVGRGLLRVIVGASSLLIARTLKTMSCRVDTADQGQVYQFYMFVWKVFYASYILLPFVR 390          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1492.3710.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTE1_ECTSI1.940e-16873.60Tocopherol phytyltransferase n=1 Tax=Ectocarpus si... [more]
A0A6H5JCM7_9PHAE3.820e-16171.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZGZ5_9STRA1.150e-8851.78Tocopherol phytyltransferase n=1 Tax=Tribonema min... [more]
A0A448ZLS0_9STRA1.390e-8551.56Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
B7G488_PHATC1.040e-8049.22Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7R9W9M6_9STRA4.970e-7947.73Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S3P573_9STRA9.230e-7949.84Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2R0V2_9STRA5.160e-7847.22Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A1E7F9X4_9STRA1.650e-7746.75Homogentisate phytyltransferase n=1 Tax=Fragilario... [more]
A0A7S2CJS5_9STRA2.990e-7749.85Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1492contigH-canaliculatus_F_contig1492:1214..9088 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score471.1
Seed ortholog evalue4e-130
Seed eggNOG ortholog2880.D7FTE1
Preferred nameHPT1
KEGG rclassRC01840,RC02895
KEGG koko:K09833
KEGG ReactionR07500,R10708
KEGG Pathwayko00130,ko01100,ko01110,map00130,map01100,map01110
KEGG ModuleM00112
GOsGO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006636,GO:0006766,GO:0006775,GO:0006810,GO:0008150,GO:0008152,GO:0008610,GO:0008643,GO:0009058,GO:0009110,GO:0009266,GO:0009507,GO:0009536,GO:0009628,GO:0009915,GO:0009987,GO:0010176,GO:0010189,GO:0010232,GO:0010233,GO:0010354,GO:0015766,GO:0015770,GO:0015772,GO:0016043,GO:0016053,GO:0016740,GO:0016765,GO:0018130,GO:0019752,GO:0031347,GO:0032501,GO:0032787,GO:0033559,GO:0042360,GO:0042362,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045229,GO:0046394,GO:0046483,GO:0048583,GO:0050789,GO:0050896,GO:0051179,GO:0051234,GO:0065007,GO:0071554,GO:0071555,GO:0071702,GO:0071704,GO:0071840,GO:0072330,GO:0080134,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617
EggNOG free text desc.homogentisate phytyltransferase activity
EggNOG OGs2R0I3@2759,COG0382@1
EC2.5.1.115,2.5.1.116
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01006
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptiontocopherol phytyltransferase
Ec32 orthologEc-21_000990.1
Exons9
Model size3354
Cds size924
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929234.1154706-UTR-H-canaliculatus_F_contig1492:1213..33331622929234.1154706-UTR-H-canaliculatus_F_contig1492:1213..3333Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1492 1214..3333 -
1696845728.682728-UTR-H-canaliculatus_F_contig1492:1213..33331696845728.682728-UTR-H-canaliculatus_F_contig1492:1213..3333Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1492 1214..3333 -
1622929234.3178062-UTR-H-canaliculatus_F_contig1492:8778..90881622929234.3178062-UTR-H-canaliculatus_F_contig1492:8778..9088Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1492 8779..9088 -
1696845728.7926571-UTR-H-canaliculatus_F_contig1492:8778..90881696845728.7926571-UTR-H-canaliculatus_F_contig1492:8778..9088Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1492 8779..9088 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929234.1285243-CDS-H-canaliculatus_F_contig1492:3333..34901622929234.1285243-CDS-H-canaliculatus_F_contig1492:3333..3490Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1492 3334..3490 -
1696845728.6943662-CDS-H-canaliculatus_F_contig1492:3333..34901696845728.6943662-CDS-H-canaliculatus_F_contig1492:3333..3490Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1492 3334..3490 -
1622929234.1393285-CDS-H-canaliculatus_F_contig1492:3906..40941622929234.1393285-CDS-H-canaliculatus_F_contig1492:3906..4094Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1492 3907..4094 -
1696845728.702726-CDS-H-canaliculatus_F_contig1492:3906..40941696845728.702726-CDS-H-canaliculatus_F_contig1492:3906..4094Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1492 3907..4094 -
1622929234.1544409-CDS-H-canaliculatus_F_contig1492:4508..46371622929234.1544409-CDS-H-canaliculatus_F_contig1492:4508..4637Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1492 4509..4637 -
1696845728.7111-CDS-H-canaliculatus_F_contig1492:4508..46371696845728.7111-CDS-H-canaliculatus_F_contig1492:4508..4637Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1492 4509..4637 -
1622929234.1702278-CDS-H-canaliculatus_F_contig1492:5014..50951622929234.1702278-CDS-H-canaliculatus_F_contig1492:5014..5095Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1492 5015..5095 -
1696845728.7235632-CDS-H-canaliculatus_F_contig1492:5014..50951696845728.7235632-CDS-H-canaliculatus_F_contig1492:5014..5095Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1492 5015..5095 -
1622929234.2226224-CDS-H-canaliculatus_F_contig1492:5955..60181622929234.2226224-CDS-H-canaliculatus_F_contig1492:5955..6018Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1492 5956..6018 -
1696845728.7347317-CDS-H-canaliculatus_F_contig1492:5955..60181696845728.7347317-CDS-H-canaliculatus_F_contig1492:5955..6018Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1492 5956..6018 -
1622929234.2401688-CDS-H-canaliculatus_F_contig1492:6708..68671622929234.2401688-CDS-H-canaliculatus_F_contig1492:6708..6867Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1492 6709..6867 -
1696845728.7485075-CDS-H-canaliculatus_F_contig1492:6708..68671696845728.7485075-CDS-H-canaliculatus_F_contig1492:6708..6867Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1492 6709..6867 -
1622929234.2640555-CDS-H-canaliculatus_F_contig1492:7663..77551622929234.2640555-CDS-H-canaliculatus_F_contig1492:7663..7755Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1492 7664..7755 -
1696845728.760036-CDS-H-canaliculatus_F_contig1492:7663..77551696845728.760036-CDS-H-canaliculatus_F_contig1492:7663..7755Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1492 7664..7755 -
1622929234.2824302-CDS-H-canaliculatus_F_contig1492:8205..82571622929234.2824302-CDS-H-canaliculatus_F_contig1492:8205..8257Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1492 8206..8257 -
1696845728.771925-CDS-H-canaliculatus_F_contig1492:8205..82571696845728.771925-CDS-H-canaliculatus_F_contig1492:8205..8257Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1492 8206..8257 -
1622929234.3030016-CDS-H-canaliculatus_F_contig1492:8775..87781622929234.3030016-CDS-H-canaliculatus_F_contig1492:8775..8778Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1492 8776..8778 -
1696845728.7834725-CDS-H-canaliculatus_F_contig1492:8775..87781696845728.7834725-CDS-H-canaliculatus_F_contig1492:8775..8778Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1492 8776..8778 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1492.3710.1prot_H-canaliculatus_F_contig1492.3710.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1492 3334..8778 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1492.3710.1

>prot_H-canaliculatus_F_contig1492.3710.1 ID=prot_H-canaliculatus_F_contig1492.3710.1|Name=mRNA_H-canaliculatus_F_contig1492.3710.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=308bp
MIGTAIAIPAIGLFAGPPGVLPGRRYLLSMIWALVPSLLINVYITGLNQI
TDVEIDKVNKPYLPIPAGNLTPRAAKATVTLCLLAGTVLGLAPSRLGSPG
LALTVVLSVLIGTSYSLPPLRLKRFPQVAALCILVVRGSIINGGFYSHAQ
MAGYGLSTDKTALWALSLPFRDAKCALALAYFTVFAVVIALMKDVPDVAG
DRKFNIPSFSVVLGEAKLFAFARRLLTALLWSTSAALGLSARAAAAAGLP
WTAGGRAAVATAALFTGQSIRRRAAKVNPEDPTEVYGFYMVLWKVFYLSY
LFLPLAR*
back to top

mRNA from alignment at H-canaliculatus_F_contig1492:1214..9088-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1492.3710.1 ID=mRNA_H-canaliculatus_F_contig1492.3710.1|Name=mRNA_H-canaliculatus_F_contig1492.3710.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=7875bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1492:1214..9088- (Hapterophycus canaliculatus Oshoro5f female)
TCAGAGACGGAGTGGAAGGGGCAGGAGGGAGAGGGGGAGGGGCGAGGGAG CGACGTGTTGGGTTCGGCGGGGGGGCGACTTGTCTCTGTCGTCGACCTCG TCGTCGTCATCGTTGGGAGTCTCGTCTCCCGTCGAGGGCAAGAATGCCAC GACGGCGGCTGGTTACGGGGGCGGGAGGGAAGGCGTGACGCTGGGCACGT TGGCCGTGGATGAGGCGGGCGGCGACGGCGGCGGCAGCGGCAGCGGCGCG CCGAGGGCCGTACAGCAGAGCTTCTTGAAGACTCTGTGGGAGTTTTCGAG ACCGCACACGATGGTAAGTGTTGAGCTGAAGCAATCAATCGTCTCGTCTA CCGTGGCTCGTGCGGGATGTCGCCGATCTCTTGTGGTTCGTTTGTTTACC TTCGTCCCGCCCCCAAGCAATTATTTGTTGATCCCGCACACCCAACGATG TATTCGCGGCGGTCGGCACGAAGCCTGCGGGGACTATGCATCGTCCCGAT TTCCCTCCCCGATGTTCGTTTAGCATTACTTGTGCCACTGCTTCTCTAAT TGCTGCCGCTGCGCCCCCGCACGTGTTGAGCCGTCCTGTTGAAAAGAAAC GAAAGCACACACACACACGCGCGCGCACACACATACACACACACACACAC ACACACACACACACACACACACACACACACACACACACACACACACACAC ACACACACACACACACACACACACACACACACACACACACACACACACAC ACACAAAAAAACAAAAACAAAAACTCGCTCTGGCCCCTCCTTTCGTCGTG CACTCTCCACACTCTCCACACGCCTTGGCAGATCGGCACCGCCATCGCCA TCCCTGCCATCGGCTTGTTCGCCGGACCTCCAGGTACAGACTTGTGCTTC CGCTAGTGACCTCGGCGTGACGCAGCTTTCCGGGGCTTGGTGGACGCTGT GTCGGGATGTGGTTTTGGGGGTCCGGCCGCCAACCTTTACTTCGCCGATG TTGTTGTTATTCCGTCGGGCTGTGCATCGTGGAAAGCTGGCTGATAAGTT TAGTCCGTATGGCGGAAGCGCCTGCTGTATCGGTGGAGAGACTTCAGGCT ACTGAGATGGGGCTGGGGCTGGCGAGCCGTGGCATGGGTGGATCGGCTTG GATGTCTCAAGGGTCAGAACCTCGATTATAACCATAGGGACCACCGGCTG CAGGCTCGTGTCTGTACAACTTCTCGAATTTCCATCCCCCTCCTGATGTT GTCCGTGCTGTCCCTGTCCCCTCGCCCCTCCCTTCCACGTTGGCATGCCT CCTCGAAATGTTGGGGGGGGGGGTTCACACCAGGGGTTTTGCCTGGCCGT CGTTATTTGCTCTCGATGATATGGGCGCTGGTGCCCTCTCTGCTCATTAA CGTGTACATCACGGGCCTGAACCAGGTGCGGCTCGGCGTAGCGGTGTTGT GCAGGTGGCGTTTTGGTTGGCGCTCGGTTGGACGTGGCCTGTTCACTCTG GCTGCGTGCGTGTGTCGTGTCCACTCTCGCGCTCGCTTGGACGCGGCCTC TTCCGTGTCTCGCCTTATCGCCACCTCTCTTTCTTACTCGCCTCTGCCGC ATTCGCGAGTCAAAAAGCCTCGACGGTTACGCTTTCTTCCGACAATGGTC ACCTGTACAGTACATCTTTGCCAAAAGAAGTACGACATGGAAACCCGGTA TGACGGGCACGTGTTCACAAGGTAAGTCTGTCGCAGAGGCTCCGGTCAGC CCGTCGGCATCCGCAACGAAGACATGAGGCACGAGCATGGCCCAACGTGG CCTCTAGTGTGGCACGTCGGCCTCTTTTTTCTGTCCACCTTCTATTCGAC ACTCGCTTGGTTTGCGCGGTGCCGCCCGCTGCCAAGAGGGGTTGAACCGG AACGCAGCTTCCGGCTCCTCGGAATGAAGAACCGTCTCTGAATGAGCGAC CCCCAACTATTCGGAATGACGGGCCTTGAGCTCTTCAGAGCGAAACGGTT GCTGCACTCATTCGTGCGTTTCTCGACTGTGAGCCGACGCGGCTTTGCTC TCGGCACAGCAGCGGGCCGTCATCCCCCGCGGGCAGGAGGCCCTCGCTGC TTCGGTTGCGGTCGTTCCCCGTCTCTCGCCTGTCGCCCCATTTTGGCGTG CTTCCGTTTCGTCGGCTCACCCTCACCCCTCCCCCGTCGCCCCCGATCGA CGCAACAAACGCGTGCCTCAGATAACGGACGTGGAGATCGACAAGGTCAA CAAGCCCTACCTCCCTATCCCCGCGGGAAACCTAACGCCTCGGGCTGCGA AGGCCACGGTCACGCTTTGCCTCCTCGCTGGGACTGTGTTGGGCCTCGCG CCGAGCAGGCTGGGATCTCCTGGGCTGGCGGTGGGTGACAAGTGGTCGGC GTTTTCTGTCCGCCTTGGATGCCGATGTCACATATTTATTTGTTTTTTCG GGACGTCTTGCCGTCGTGCCCATTGCGGACAGCAGGAAAAACCCGAACCG CTCACCGAGGGGAAGTCGCCTGATGTTGACGACATCGGACCATGTTGCGG TGCTGCTGATGGCGCTCTTCACCGTGGAGGCCCCGATGCCCTACGCGAAC TCCGCTGGTAGTGGTGTGTCCCAGGCTGGGCGGGCTCAGCAACACCTTCG AGAAGAACTGCCCACGTGCTGTATACGCACGTTTGTGTTGGTGGTGGTGG TGGTGGCTGTGTTGCCATCCGCATGATCGATGAAACTCTGTCGCCCAAAC GCACTAATCTTCCCACCACGCATAAGTCGGCTCCGTATCGACTTCTACAT GCAATATTTATCTGTTCGTCTCTCAATTTCTTCTCTCGCCATTGTTTTTT GGGCTGCAGTCACGCCGCAATGTGACACACATACCCGCTCGCGCACCGGC CTCCGCGCCCATACAACTCTCGTCGTGAAATCCACGGAATGGGTCTATCT ATCATCCCGCGATATCCGCTCCACTCTTGGACACTCGCCAAAAATACAAA CAATCGCCATCCTGTTTCTTTGTCTTGCATACGTTCGGTGCTCCTACTGC TGCTGCTCCTGCTGGCGCAGCTGACGGTGGTGCTATCGGTGCTGATCGGA ACTAGCTACTCGCTTCCACCTTTGCGCCTGAAGGTCCGTCCGCGGAGCTG ACGCCGAGGAGTGCTCGCATCGCATTTGGATCGATTGCGGTGGATGTCGC AGTTGCAGGATCTACGTCTTTTCTAGGGGCCCCATGAGTTTTCTAGGCCA CGACGGGGGTTGCTGCCACTGCCAGACGAAATTTGCGAACTAGAACAAGA ACATTGTCGAGCAGACGAGACCAAAACGTGGCGTATGAGAACAGACCTAA ACAGGAAGAAGGTAAAGAAGGAAGGAGTGATTCTTGCGTTCTCGGTAAGC CAGGTCTTCTCGCCGGCAGCCTCTTCGAAAGCTCGCAGCTTCTAGCTCGA TGAGATGAGATGAGATGAGACACGTCCGACTCCCGCACCGCCCTTTTCGA AACGCACCCTTCTCCTTGCACTCCGTGGAGAGATCCAACCTCGAAAGTCG GCCCCGCGGGTGTGGTAAATGGCGGGGGCTTGGGTGCGTCGTTCTCTGGC GCAGTGGGCCGTTTCTCGACACGCGTTAGACCTTTCGAGGGGCCTGTGTT CTCCCACGGGATCTACGGTAGGTGCTTGCGCGGGGGGCACATCGGAGTGC CTCGTGCGGTCCCTCTTTCCTCGTCTTGCGTCGCCGCTTGCTGCTCTCTG TTTGCCTGGCAAGCGGTAGGGTAGGCGGTGGCGGCCGCGGCGGCGCCGGC GGCGCCGGCAGCAGCAGCACGAGCTCGTGAGCGTCGTGGGGCTGGGTCGG TGGCCATTCCTCCTGGCACGGTTTGCTTTGTCGCCCTTGCGTGAGGGAGG GTATGCGCAACCCCTGAAAATCTCGTCCGCGGCGCCCCTAGACCGTGACC CCCTGTCCTCCTCCGTCCGCTCCCCGCTTTCGCTCGACCGCAGCGTTTCC CCCAGGTGGCCGCGTTGTGCATCTTGGTGGTGAGGGGCTCCATCATCAAC GGAGGATTCTACTCGCATGCCCAGGTTAGTGAACAACCTGGTGTGTGCAC AATGCAGGCAGGCGTTTCTTGTGTCGTGGCTCGGCATCGCGGGTTCCAGC TGTTGTTTCGACTGGGTGAGGTCTACGAAACGGCAGTGACCGCTGAGAAC AAGCATGGCTTCGTTTTGGAGAAACGGACCTCGACTAGTCGTCCTCTCGC CCTTGGTCTGCTCCGCTAGCCCCGCACATCGCCGCAAAGCTGTGCGCTCT CGTTCTTCCTTGCGCGCTGTCTTGCCTCTTCTTCTTGCCGATGCTCCCCG TCCGTGTGCCGCCACCGTCGCCGCTCTCGTCGCAACAACTCTCGCTGCCG CCGCCGCTGCCGCCGCCGCCGCCGCCGCCGCTGCTGCTGCTGCTGCTCCA GATGGCAGGGTACGGGCTTTCCACCGACAAGACAGCTCTGTGGGCCTTGA GCTTACCCTTCAGGGACGCGAAATGCGCCCTGGCGCTTGCGTACTTCACC GTCTTCGCTGTCGTTATCGCTCTCATGAAGGTGTGGCCCCCGGCTCTCCG GCCATTCGCGCCTTTGCTGCTCGACGGCCCTGGCAGAGGAAGTCAGCGCG CGTGCTTCAGTAAATACCTTCCGCGTGCGTTAGTGTGTGTGTTCTGGAGA CTCGGGACTTGGGTATTCTAGAAGCGTTAACCGCGGGCACCGGATGGCCG ACGAAAGCGGCTGGTGTTTCGGGGTCACCCGGATAGGAGCGAGAGCGATT TTGTCCGTCTTCTGAAGCGCTGCCCACGGCCATGTTGTCGTCGCGGCTGG CGCATCAAGGAACACGTTCAAGGTTCTCAATCCCTGTTTCGACCTAACCC CTCTGCCCCCGCCCTTTTTTCAGACGAACCTCTCGCTCACACCCCCTCCC CGCCCGCCCCCCCCCCCCTCCGAAAATCGAATAATCATCGGCAGGACGTC CCAGACGTGGCCGGGGACCGGAAGTTCAACATCCCCTCCTTTTCGGTGGT GTTGGGGGAGGCCAAGCTCTTCGCCTTCGCCCGGCGGCTGCTGACCGCGC TCCTGTGGTCAACTTCGGCGGCGCTCGGCCTGAGCGCGAGGGCGGCGGCG GCGGCGGGTCTGCCCTGGACCGCTGGAGGGAGGTAAGAAACATCAAGGGT AGTGCTCCTGTTCCACAAAGGGGAAAGGCGAAGTTCGGAACCGACGTTTC TTCGGTTGAAACCCTTTACGAAGGGGTGGACGTGTTCGTCTTTGTGTTTT TCGCCAGCCAGGCAGGAGATGAAAAACAAACGTATCGCAGGAGGCTCGCA TTCACGGCGATAACGATCCCCACGGCATTTTTTCGACGATTCGTGCAGCA GCTTGACCCCTTTTCCTTCCGTCTTCCCGCCCCCCCCGAGAACAACTTTG ACTCGACGCGAACCCGTTTGAGCGTAGTTGTCGGGGTCATTCCGTTTTCG ATTCGATCATCGTGCCCTTACTCCTCCCGTCTCCTCTCCCTCCCGCCTAC CTCCCGTCGCGCCCCGTCCCGCTCCCGCTCCCGCTCCGCTTCTTGCAGGG CGGCCGTGGCGACGGCGGCGCTCTTCACCGGCCAGTCTATTCGGCGGCGA GCGGCCAAAGTGAATCCGGAGGACCCCACGGAAGTCTACGGCTTCTACAT GGTGCTGTGGAAGGTTTTCTACCTGAGCTACCTCTTCCTTCCCCTGGCGC GGTGAAGAAGGCGGGAGACAGGATGGCGAGGGCATGGCGGCAGCCGAAGA TGGGGATACGCGACCGAGGGGCGCGAGGGGTGCCGGGTTTCGTGGAAGAG GAGGTGGATTCGTTTTTTCTGCAACAGTCCCGCGACGATCGCTTCACGCG AGTGAACAGGGTTGTGTGTTTGTTTCTTGAGACCCGGGGAAAGCGGGCTT GCTTTAACTGCCCACGTGGAGGGCAAGGATTATTCGCGGCGTGCTACAGG CATCTGCTTCACCCGGAGCTCTCTCCCTCTCTCTTCGCCAGACATGGAGA GGAAACGCGACGGGTCACGCCCGACGAGTCGGGCTTGTAGCGAAGGGATG GGTTGCCTGCCGCACAGGTGACCACCTCCCCACGGGGTTTGATGGGTCGG CGGGGCGGGCGAGGAGAAATCCGTCCTGCGGTGCGTGCGCAGGCAGCGCA CCGTTTGTTGCGCTGTGTGACTGCGATCGACTCGACTCGCTTGTCGAGGT ACCGAGTGTTATCTTTGCGCGGGGCGGTGCGGTGCCGATTCTTTCGCTCT TCTGTGGTGCCTTCTTGGGTGTTGTCGCGCCAGTGTGACGGTGGACCCCT GCCGTGGTTTGGTACCCCAGGCCGGCTCGGTCTTTTCGTGGCGGGGCCGC CGTGCCCCCGCCCGCTTCTCTTGCGCTGTAGGGGTCGGTCTTGTGTTTGT GCCGGAGGGCTGCTGAATTGGTGATCGGTGTTTTCGCCACGGCGAGAGAC GTTCGTGCTTGCTTGCTTTTTTTTTTTGTACTTTTTACTCCCGGCCGGGC ACGCGCGACGCCAACGCTGAGGTTTATAAATTGCTTTACCAAGTGGTACT TCCCTCAAGCGACGAAAGGGTGGGCTGTGAAAACCCTTCGAGTGCCGCCG GTTGCCTGGCGCTGGAGGAAGTGTTTTTGGTCTGGTGTGCTACTTTACCG CTGTCCGAATTGCTCGTTGACTGGATTGTGGATCTTGATATTCGGTAATC CAGGAAGAATTTTACCCTTGACTTTGCCAGCATGGATTCTACGTCACTGT GCTCCACCGCATCCGGCATTTAATCGAACTATTTTATGCCATCCACTTTT GCCGTCCACACGTGGCTTTTCCCAGACTGTGCGTGTTGTGAGATGTCAGT ATTCAGATGTGAAAGTTCTCCGCCAACCTGGTGCGTGAAGCGCTGTCGTT GCTGCCGCCGCCACGGCTGCTGCTCTTGGTATTTTTGTCTTTGTTCTCTG TCAAATGACTTGATCGCCGAAAGTTCATCGGTTGTCATGATCGCTTTGCT TGTGTGCGTGAGCTTTGGGGACGGGGAGGCCTAGGACACGTCAGGTGTAG ACTAGTAAGAGGCCGCAAGCCGATGCAAAGCGCTTTCGTGTTTTGTCCGG GCTGACAGCCAGGTATCCGTCGGGCAGAAAGGCGGCGTAGGCATGAAACC CCGATAGTGTCGGGTAGGAGTGAGCCTTCCATCTGCGGCAATCCATGTTC CATTTTTTTTCCAAATACTAATTTATCCTACTCAAATCAGTTTTCCTCGT AAATCTGCCGTGTATATCGTGGCCGATGTGGCTCAGCCGTATTTCGGGGC CGCGTAGGTGCGAAAAGCGTCGGAGCATTGATGGAAAATGCATGGGGAGC GAGGTTTGGCGACAACACCGGGATGGAACGAGTAGACATGAGCCCCCTTC TCGGATCCGAAGTTTTTCCACTGGAGTTCTTTTTTCTCAGCATAGATATT CGCGAAGGCGCTCAAACATCCTGGTTGGGAAAATTGTCCATTCTTTATTC GCAAGCCGCGTTTCACCTCCATTTGAAGCCGCTATCGTGACTGATTTCAA AAAAGATTCGGGGGAATGAGAACCAAGACGAACATTCTTGTTGAATTTTG TCGACCTGCCAAGGCTGGTGAGGAAACTTGGAGAAGGAGTTCCGTCACGT TGCACTCGTCTCTAGGCAATATCGAGCATTCATACATAGGTCAATTCGAT CCGCGAGGGGATGGGTTTTCCACTTCGGGAAAGGAGCATGTTTTGAATGA CAACTGCGCCTTAAAACAGTTCGCCAGCGATGTGTGCCTGTGTTGAGGAA GTGGACGCTTCGTAGGAAAGAAGTG
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1492:1214..9088-

>mRNA_H-canaliculatus_F_contig1492.3710.1 ID=mRNA_H-canaliculatus_F_contig1492.3710.1|Name=mRNA_H-canaliculatus_F_contig1492.3710.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1848bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1492:1214..9088- (Hapterophycus canaliculatus Oshoro5f female)
ATGATGATCGGCACCGCCATCGCCATCCCTGCCATCGGCTTGTTCGCCGG
ACCTCCAGATCGGCACCGCCATCGCCATCCCTGCCATCGGCTTGTTCGCC
GGACCTCCAGGGGTTTTGCCTGGCCGTCGTTATTTGCTCTCGATGATATG
GGCGCTGGTGCCCTCTCTGCTCATTAACGTGTACATCACGGGCCTGAACC
AGGGGTTTTGCCTGGCCGTCGTTATTTGCTCTCGATGATATGGGCGCTGG
TGCCCTCTCTGCTCATTAACGTGTACATCACGGGCCTGAACCAGATAACG
GACGTGGAGATCGACAAGGTCAACAAGCCCTACCTCCCTATCCCCGCGGG
AAACCTAACGCCTCGGGCTGCGAAGGCCACGGTCACGCTTTGCCTCCTCG
CTGGGACTGTGTTGGGCCTCGCGCCGAGCAGGCTGGGATCTCCTGGGCTG
GCGATAACGGACGTGGAGATCGACAAGGTCAACAAGCCCTACCTCCCTAT
CCCCGCGGGAAACCTAACGCCTCGGGCTGCGAAGGCCACGGTCACGCTTT
GCCTCCTCGCTGGGACTGTGTTGGGCCTCGCGCCGAGCAGGCTGGGATCT
CCTGGGCTGGCGCTGACGGTGGTGCTATCGGTGCTGATCGGAACTAGCTA
CTCGCTTCCACCTTTGCGCCTGAAGCTGACGGTGGTGCTATCGGTGCTGA
TCGGAACTAGCTACTCGCTTCCACCTTTGCGCCTGAAGCGTTTCCCCCAG
GTGGCCGCGTTGTGCATCTTGGTGGTGAGGGGCTCCATCATCAACGGAGG
ATTCTACTCGCATGCCCAGCGTTTCCCCCAGGTGGCCGCGTTGTGCATCT
TGGTGGTGAGGGGCTCCATCATCAACGGAGGATTCTACTCGCATGCCCAG
ATGGCAGGGTACGGGCTTTCCACCGACAAGACAGCTCTGTGGGCCTTGAG
CTTACCCTTCAGGGACGCGAAATGCGCCCTGGCGCTTGCGTACTTCACCG
TCTTCGCTGTCGTTATCGCTCTCATGAAGATGGCAGGGTACGGGCTTTCC
ACCGACAAGACAGCTCTGTGGGCCTTGAGCTTACCCTTCAGGGACGCGAA
ATGCGCCCTGGCGCTTGCGTACTTCACCGTCTTCGCTGTCGTTATCGCTC
TCATGAAGGACGTCCCAGACGTGGCCGGGGACCGGAAGTTCAACATCCCC
TCCTTTTCGGTGGTGTTGGGGGAGGCCAAGCTCTTCGCCTTCGCCCGGCG
GCTGCTGACCGCGCTCCTGTGGTCAACTTCGGCGGCGCTCGGCCTGAGCG
CGAGGGCGGCGGCGGCGGCGGGTCTGCCCTGGACCGCTGGAGGGAGGACG
TCCCAGACGTGGCCGGGGACCGGAAGTTCAACATCCCCTCCTTTTCGGTG
GTGTTGGGGGAGGCCAAGCTCTTCGCCTTCGCCCGGCGGCTGCTGACCGC
GCTCCTGTGGTCAACTTCGGCGGCGCTCGGCCTGAGCGCGAGGGCGGCGG
CGGCGGCGGGTCTGCCCTGGACCGCTGGAGGGAGGGCGGCCGTGGCGACG
GCGGCGCTCTTCACCGGCCAGTCTATTCGGCGGCGAGCGGCCAAAGTGAA
TCCGGAGGACCCCACGGAAGTCTACGGCTTCTACATGGTGCTGTGGAAGG
TTTTCTACCTGAGCTACCTCTTCCTTCCCCTGGCGCGGTGAGGCGGCCGT
GGCGACGGCGGCGCTCTTCACCGGCCAGTCTATTCGGCGGCGAGCGGCCA
AAGTGAATCCGGAGGACCCCACGGAAGTCTACGGCTTCTACATGGTGCTG
TGGAAGGTTTTCTACCTGAGCTACCTCTTCCTTCCCCTGGCGCGGTGA
back to top