|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 975 |
| Cds size | 756 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929233.416945-CDS-H-canaliculatus_F_contig14901:1287..2043 | 1622929233.416945-CDS-H-canaliculatus_F_contig14901:1287..2043 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig14901 1288..2043 + |
| 1696845728.4808712-CDS-H-canaliculatus_F_contig14901:1287..2043 | 1696845728.4808712-CDS-H-canaliculatus_F_contig14901:1287..2043 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig14901 1288..2043 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929233.4305813-UTR-H-canaliculatus_F_contig14901:2043..2262 | 1622929233.4305813-UTR-H-canaliculatus_F_contig14901:2043..2262 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig14901 2044..2262 + |
| 1696845728.492282-UTR-H-canaliculatus_F_contig14901:2043..2262 | 1696845728.492282-UTR-H-canaliculatus_F_contig14901:2043..2262 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig14901 2044..2262 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14901.3703.1 >prot_H-canaliculatus_F_contig14901.3703.1 ID=prot_H-canaliculatus_F_contig14901.3703.1|Name=mRNA_H-canaliculatus_F_contig14901.3703.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=252bp
KDAESSPCSHEKTSGGGRARTESAATGAATAAVGSGATPTVAAPAVLDSA
AAPLAAAAVIVGSEAAPPGSEAAASGTDKGGKSDGEEVASAGRAKRRAGS
QSRAPAGGGRARALKVSTKDDQERDRDQEEEEGDDNEGEEEERAGRDDGE
ESGGGKKRQTPARARVKRKVRPEDRRSSPRNADKALAAAGAAAAGGSGGG
AGRKRKPASPSSAGGNKRQSVGGVNGNDQGRRQSSRAASAVATAALSGGR
S* back to topmRNA from alignment at H-canaliculatus_F_contig14901:1288..2262+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig14901.3703.1 ID=mRNA_H-canaliculatus_F_contig14901.3703.1|Name=mRNA_H-canaliculatus_F_contig14901.3703.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=975bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14901:1288..2262+ (Hapterophycus canaliculatus Oshoro5f female)
AAGGATGCGGAAAGCTCTCCCTGTTCCCACGAAAAAACGAGCGGGGGAGG
AAGGGCGCGCACGGAATCAGCGGCAACAGGAGCGGCTACCGCCGCGGTCG
GATCGGGGGCGACGCCGACAGTGGCAGCACCCGCGGTGCTCGATTCTGCT
GCAGCACCGCTTGCAGCAGCAGCCGTGATCGTCGGATCGGAAGCGGCGCC
ACCTGGATCGGAAGCGGCGGCCTCCGGGACGGACAAAGGAGGAAAGAGCG
ACGGGGAGGAGGTGGCGTCGGCCGGCCGGGCCAAACGCAGGGCGGGGAGC
CAGAGCAGGGCGCCGGCTGGGGGCGGTAGAGCCAGAGCCCTGAAGGTCAG
CACCAAGGACGACCAGGAGCGAGACCGGGACCAGGAAGAGGAGGAGGGCG
ACGATAACGAGGGGGAGGAGGAGGAGAGGGCGGGGCGAGACGACGGGGAG
GAGTCAGGGGGAGGGAAGAAACGACAGACCCCGGCGAGGGCAAGGGTGAA
GAGAAAGGTGAGGCCCGAGGACCGCCGCTCCTCTCCTCGTAACGCGGACA
AGGCCCTGGCCGCCGCTGGGGCAGCGGCGGCAGGAGGCAGCGGCGGCGGC
GCCGGGAGGAAGAGGAAACCGGCGTCCCCGTCGTCCGCCGGCGGCAACAA
GAGGCAATCGGTCGGTGGGGTCAACGGGAACGACCAGGGCCGTCGCCAGT
CCAGCCGGGCGGCGTCTGCGGTGGCGACGGCGGCCTTGAGCGGTGGCAGG
AGTTGAAGGGGCCGAAGGCGTCGCCGTGGAGGTTGTTTTCTGTCTCTTGT
GTCCGGAGCGAAAGTATGGGATAGCGATGGTGTCTCGTTTTGTCTACAAG
GCGTGTGATGTTAGGAGTGAGATTGCGTCCTTGGGGTGCGACAGGTGCAC
ATGTCGCGATTTTTCACGCGCGTCCGGAACCAACCTCCGTGTCAGTGTTC
GCATCGGGTGACGGTGCTTGCGAGC back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig14901:1288..2262+ >mRNA_H-canaliculatus_F_contig14901.3703.1 ID=mRNA_H-canaliculatus_F_contig14901.3703.1|Name=mRNA_H-canaliculatus_F_contig14901.3703.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1512bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14901:1288..2262+ (Hapterophycus canaliculatus Oshoro5f female)
AAGGATGCGGAAAGCTCTCCCTGTTCCCACGAAAAAACGAGCGGGGGAGG
AAGGGCGCGCACGGAATCAGCGGCAACAGGAGCGGCTACCGCCGCGGTCG
GATCGGGGGCGACGCCGACAGTGGCAGCACCCGCGGTGCTCGATTCTGCT
GCAGCACCGCTTGCAGCAGCAGCCGTGATCGTCGGATCGGAAGCGGCGCC
ACCTGGATCGGAAGCGGCGGCCTCCGGGACGGACAAAGGAGGAAAGAGCG
ACGGGGAGGAGGTGGCGTCGGCCGGCCGGGCCAAACGCAGGGCGGGGAGC
CAGAGCAGGGCGCCGGCTGGGGGCGGTAGAGCCAGAGCCCTGAAGGTCAG
CACCAAGGACGACCAGGAGCGAGACCGGGACCAGGAAGAGGAGGAGGGCG
ACGATAACGAGGGGGAGGAGGAGGAGAGGGCGGGGCGAGACGACGGGGAG
GAGTCAGGGGGAGGGAAGAAACGACAGACCCCGGCGAGGGCAAGGGTGAA
GAGAAAGGTGAGGCCCGAGGACCGCCGCTCCTCTCCTCGTAACGCGGACA
AGGCCCTGGCCGCCGCTGGGGCAGCGGCGGCAGGAGGCAGCGGCGGCGGC
GCCGGGAGGAAGAGGAAACCGGCGTCCCCGTCGTCCGCCGGCGGCAACAA
GAGGCAATCGGTCGGTGGGGTCAACGGGAACGACCAGGGCCGTCGCCAGT
CCAGCCGGGCGGCGTCTGCGGTGGCGACGGCGGCCTTGAGCGGTGGCAGG
AGTTGAAAGGATGCGGAAAGCTCTCCCTGTTCCCACGAAAAAACGAGCGG
GGGAGGAAGGGCGCGCACGGAATCAGCGGCAACAGGAGCGGCTACCGCCG
CGGTCGGATCGGGGGCGACGCCGACAGTGGCAGCACCCGCGGTGCTCGAT
TCTGCTGCAGCACCGCTTGCAGCAGCAGCCGTGATCGTCGGATCGGAAGC
GGCGCCACCTGGATCGGAAGCGGCGGCCTCCGGGACGGACAAAGGAGGAA
AGAGCGACGGGGAGGAGGTGGCGTCGGCCGGCCGGGCCAAACGCAGGGCG
GGGAGCCAGAGCAGGGCGCCGGCTGGGGGCGGTAGAGCCAGAGCCCTGAA
GGTCAGCACCAAGGACGACCAGGAGCGAGACCGGGACCAGGAAGAGGAGG
AGGGCGACGATAACGAGGGGGAGGAGGAGGAGAGGGCGGGGCGAGACGAC
GGGGAGGAGTCAGGGGGAGGGAAGAAACGACAGACCCCGGCGAGGGCAAG
GGTGAAGAGAAAGGTGAGGCCCGAGGACCGCCGCTCCTCTCCTCGTAACG
CGGACAAGGCCCTGGCCGCCGCTGGGGCAGCGGCGGCAGGAGGCAGCGGC
GGCGGCGCCGGGAGGAAGAGGAAACCGGCGTCCCCGTCGTCCGCCGGCGG
CAACAAGAGGCAATCGGTCGGTGGGGTCAACGGGAACGACCAGGGCCGTC
GCCAGTCCAGCCGGGCGGCGTCTGCGGTGGCGACGGCGGCCTTGAGCGGT
GGCAGGAGTTGA back to top
|