mRNA_H-canaliculatus_F_contig1489.3684.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1489.3684.1
Unique NamemRNA_H-canaliculatus_F_contig1489.3684.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1489.3684.1 vs. uniprot
Match: D8LTT6_ECTSI (Putative initiation factor eIF3 g subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTT6_ECTSI)

HSP 1 Score: 342 bits (878), Expect = 1.740e-108
Identity = 195/312 (62.50%), Postives = 212/312 (67.95%), Query Frame = 3 
Query:  702 MPGRQAWGDDDXXDYLPPRQESAVDSNGVKSIVEYHFNSNGAKVKRTTKVKVFTEHTRVHKSCLERTKWNKFGLAAQVDDNSSYTIKSMEEIKMETPQESREADEKPNSMEDTLKEAMERMRRKHAMRTAGLLESTNESAPPEDESAGXXGMMGLGVGGAGKYVPPSRKVGFAGRGEAGPEGASNPMSMGEDHTKIRVTNISEDTTEGDLRDLFSAFGRI-NRVYLAKDPETMQSRGFAFVSYYQKSDAESAMQALQGYGYDHLILKLEWAKPSLRDVATEGGLSGMRTSGYGERLAQDTKQQVSYASNLTR 1634
            MPGRQAWGDDD  DYLPPRQESAVDS GVKSIVEYHFN+NGAKVKRTTKVKVFTEHTRVHKSCLERT+WNKFGLAAQ +DN S  IK  EE + E P++SR+ +E PNS  D LK         H MRT     S  E+A PE+E        GL                               +     H  +R  +         + ++    G+   RVYLAKDPETMQSRGFAFVSYYQKSDAESAMQALQGYGYDHLILKLEWAKPSLRDVATEGGLSGMRTSGYGERLAQDTKQQVSYASNLTR
Sbjct:    1 MPGRQAWGDDDDDDYLPPRQESAVDSKGVKSIVEYHFNTNGAKVKRTTKVKVFTEHTRVHKSCLERTQWNKFGLAAQGEDNPSSPIKWREEFRREPPRDSRKPEENPNSRGDPLKGPRGPRGGNHPMRTGARRGSPKEAALPEEE--------GL-------------------------------LRFSRSHLAVRALS--------GMDEVVPLLGQAWPRVYLAKDPETMQSRGFAFVSYYQKSDAESAMQALQGYGYDHLILKLEWAKPSLRDVATEGGLSGMRTSGYGERLAQDTKQQVSYASNLTR 265
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1489.3684.1 vs. uniprot
Match: A0A835YJN9_9STRA (Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJN9_9STRA)

HSP 1 Score: 311 bits (798), Expect = 5.550e-96
Identity = 179/317 (56.47%), Postives = 215/317 (67.82%), Query Frame = 3 
Query:  711 RQAWGD-DDXXDYLPPRQESAVDSNGVKSIVEYHFNSNGAKVKRTTKVKVFTEHTRVHKSCLERTKWNKFGLAAQVDDNSSYTIKSMEEIKMETPQESREADEKPNSMEDTLKEAMERMRRKHAMRTAGLLESTNESAPPEDESAGXXGMMGLGVGGAGKYVPPSRKVGFAGRGEAGPEGASNPMSMGEDHTKIRVTNISEDTTEGDLRDLFSAFGRINRVYLAKDPETMQSRGFAFVSYYQKSDAESAMQALQGYGYDHLILKLEWAKPSLRDVA--------TEGGLSGMRTSGYGERLAQDTKQQVSYASNLTR 1634
            R  WGD DD  DYLPPRQES VD  G+K++VE+ FN  G K K TTKVKVF E  R+ ++  ER KW  FG AA+V DN SYT+ S E++ METP+ES+EADE+P+++ D+LKEAMER+RR++AMR  G+L    E+AP +DE   XX                                 + PM + ED TKIRVTNISEDTTEGDLR+LF  FGRI+RVYLAKDPETMQSRGFAFVS+  ++DAE AM  LQGYGYDHLILKLE+AKPS RD A            LS  R SGYG+ LAQDTK++VS+ASNLTR
Sbjct:    2 RGNWGDEDDDPDYLPPRQESGVDGKGIKTVVEWAFNDAGQKTKTTTKVKVFAEQQRISRAVAERKKWKVFGAAAEVSDNHSYTLTSQEQVMMETPRESKEADEQPSNVSDSLKEAMERVRRRNAMRQMGML-GDGEAAPTDDEXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXDAPPMPL-EDRTKIRVTNISEDTTEGDLRELFGTFGRIHRVYLAKDPETMQSRGFAFVSFTSEADAERAMNKLQGYGYDHLILKLEFAKPSQRDAAGXXXXXXXXXXXLSSARVSGYGQALAQDTKERVSFASNLTR 312
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1489.3684.1 vs. uniprot
Match: A0A6H5KD36_9PHAE (eIF3g domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD36_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 1.970e-79
Identity = 135/150 (90.00%), Postives = 145/150 (96.67%), Query Frame = 3 
Query:  690 LRSIMPGRQAWGDDDXXDYLPPRQESAVDSNGVKSIVEYHFNSNGAKVKRTTKVKVFTEHTRVHKSCLERTKWNKFGLAAQVDDNSSYTIKSMEEIKMETPQESREADEKPNSMEDTLKEAMERMRRKHAMRTAGLLESTNESAPPEDES 1139
            + SIMPGRQAWGD  XX YLPPRQESAVDSNGVKSIVEYHFN+NGAKVKRTTKVKVFTEHTRVHKSCLERT+W KFGLAAQVDDN+S+++KSMEEI+METPQESREADEKPNSMEDTLKEAMERMRRKHAMRTAGLLESTNE+APPEDE+
Sbjct:   34 VNSIMPGRQAWGDXXXXXYLPPRQESAVDSNGVKSIVEYHFNANGAKVKRTTKVKVFTEHTRVHKSCLERTQWKKFGLAAQVDDNASHSMKSMEEIRMETPQESREADEKPNSMEDTLKEAMERMRRKHAMRTAGLLESTNEAAPPEDEA 183
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1489.3684.1 vs. uniprot
Match: A0A7S2GQ53_9STRA (Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GQ53_9STRA)

HSP 1 Score: 239 bits (611), Expect = 1.980e-68
Identity = 151/324 (46.60%), Postives = 193/324 (59.57%), Query Frame = 3 
Query:  708 GRQAWGDDDXXD-YLPPRQESAVDSNGVKSIVEYHFNSNGAKVKRTTKVKVFTEHTRVHKSCLERTKW-NKFGLAAQVDDNSSYTIKSMEEIKMETPQESREADEKPNSMEDTL------KEAMERMRRKHAMRTAGLLESTNESAPPEDESAGXX------GMMGLGVGGAGKYVPPSRKVGFA-GRGEAGPEGASNPMSMGEDHTKIRVTNISEDTTEGDLRDLFSAFGRINRVYLAKDPETMQSRGFAFVSYYQKSDAESAMQALQGYGYDHLILKLEWAKPSLRDVATEGGLSGMRTSGYGERLAQDTKQQVSYASNLTR 1634
            G   WGD++  + YLP + E+ +D+ G+K++ EY F+  G K+K T KV+V    TR  K+  ER K   KFG A  V+D S+ TI    E+KM  P+ S   DE   +           K+    ++RK+ M      +  N+  PPE E           GM G G GG+ KYVPP  + G     G AG    S       D+T IRVTNISEDT E DL+DLF  FGRI R+YLAKD ET +SRGFAFVS+ ++ DAE AM+ALQGYGYDHLILKLEWA+PS RD A  G  +    SGYG+ LAQDTK++VS+ASNLT+
Sbjct:   21 GAMGWGDEEEEEGYLPDKHETEIDARGIKTVTEYKFDEAGNKIKVTKKVRVINTITRRTKASEERRKRIQKFGNALGVEDESNVTITDFNEVKMMNPKASEAEDETAGANVSAAFANFQKKQQWRSLQRKYDMEDGNEGDPANK--PPEGEEGADSKDKPTGGMFG-GAGGS-KYVPPGARAGAVPAAGAAGGRSLSAMSFDDRDYTTIRVTNISEDTKEIDLQDLFETFGRIFRIYLAKDRETGESRGFAFVSFSRREDAERAMEALQGYGYDHLILKLEWARPSTRDTANAGAEATQFRSGYGKALAQDTKEKVSFASNLTK 340
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1489.3684.1 vs. uniprot
Match: F0YAL4_AURAN (Eukaryotic translation initiation factor 3 subunit G n=3 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAL4_AURAN)

HSP 1 Score: 232 bits (592), Expect = 4.940e-62
Identity = 155/317 (48.90%), Postives = 195/317 (61.51%), Query Frame = 3 
Query:  717 AWGDD-DXXDYLPPRQESAVDSNGVKSIVEYHFNSNGAKVKRTTKVKVFTEHTRVHKSC---LERTKWNKFGLAAQVDDNSSYTI--KSMEEIKMETPQESREADE---KPNSMEDTLKEAMERMRRKHAMRTAGLLESTNESAPPEDESAGXXGMMGLGVGGAGK--YVPPSRKVGFAGRGEAGPEGASNPMSMGEDHTKIRVTNISEDTTEGDLRDLFSAFGRINRVYLAKDPETMQSRGFAFVSYYQKSDAESAMQALQGYGYDHLILKLEWAKPSLRDVATEGGLSGMRTSGYGERLAQDTKQQVSYASNLTR 1634
            AWGDD D  D LPPR E+ V++ G K++VE+  N+ G K+K+TT+V V T  TR  K     + R K NKFG A    D+S+ TI   + E + ME   ES +A +   K +  E   K+   ++++K+ M   G +    E     D +A      G    G GK  YVPPS + G AG G AG   A        D   +RVTNISEDT E DL+ LF+ +GRI R+YLAKD ETM SRGFAFVSY  + DAE AM ALQG+GYDHLILK+EWAKPS+     EGGLSG  TSGYG+ LAQDTK++VSYASNLT+
Sbjct:  390 AWGDDEDDDDALPPRTETKVNAAGFKTVVEWSLNTAGQKMKKTTEVFVKTVETREAKCVAGRVARLKANKFGQAKGSQDDSNVTIVAHNEERVTMEVA-ESEDATQQAAKASMNEFARKQMWRKLQQKYGMEEEGKMPPGAEG----DIAAAMGAASGDARAGGGKSTYVPPSMR-GQAGAGVAGSAIARMAQFDDRDQASLRVTNISEDTCEADLQVLFAPYGRIARIYLAKDRETMVSRGFAFVSYIHRQDAERAMAALQGHGYDHLILKIEWAKPSVPKPDAEGGLSGGFTSGYGKALAQDTKERVSYASNLTQ 700
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1489.3684.1 vs. uniprot
Match: A0A6U5KZ42_9STRA (Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5KZ42_9STRA)

HSP 1 Score: 221 bits (562), Expect = 2.270e-61
Identity = 141/320 (44.06%), Postives = 189/320 (59.06%), Query Frame = 3 
Query:  747 LPPRQESAVDSNGVKSIVEYHFNSNGAKVKRTTKVKVFTEHTRVHKSCLERTKW--NKFGLAAQVDDNSSYTIKSMEEIKMETPQESREA-DEKPN-SMEDTLKEAMERMRRKHAMRTAGL----LESTNESAPPEDESAGXXGMMGLGVGGAGKYVPPSRKVGFAGRG---------------EAGPEGASNPMSMGEDHTKIRVTNISEDTTEGDLRDLFSAFGRINRVYLAKDPETMQSRGFAFVSYYQKSDAESAMQALQGYGYDHLILKLEWAKPSL-RDVATEGGLSGMRTSGYGERLAQDTKQQVSYASNLTR 1634
            LPP + S  D  G+K+++ +  +  G +V+ TT+V+V T   R  K+ L R  W  NKFG AA  +D S+ TI+SM+E+++E P    +  DE P+ ++   L    ++ + +H  R  G+      +  E    +D + G    +G    G GKYVPPS +    G G               E G +G +      + +T IRVTNISEDTTE DL+DLF  FGRI+RVYLAKD ET+ SRGFAF+S+    DA  +M+ LQGYGYDHLILKLEWAKPS  +D  +EG       SGYG+ LAQDTKQ+VSYASNLTR
Sbjct:   33 LPPSKSSGPDGKGIKTVISWRRDDAGRRVRLTTRVRVSTSTVRHPKTRLARRHWVRNKFGAAASCEDESNVTIRSMDEVRIEDPNADVDLQDEDPSKALAGNLNAFWQKQKERHLKRQYGVDGDDAANAQELQDQKDAAEGWS-KVGSAAAGGGKYVPPSMRGTSGGGGKSLADMAERAGVTGDEGGKDGGARRFDDRDQNT-IRVTNISEDTTEADLQDLFQPFGRISRVYLAKDRETLVSRGFAFISFVHHDDASRSMEKLQGYGYDHLILKLEWAKPSAQKDPGSEGT---QFRSGYGKALAQDTKQKVSYASNLTR 347
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1489.3684.1 vs. uniprot
Match: A0A8J2SWG8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SWG8_9STRA)

HSP 1 Score: 219 bits (557), Expect = 4.290e-61
Identity = 143/316 (45.25%), Postives = 195/316 (61.71%), Query Frame = 3 
Query:  717 AWGDDDXXDY-LPPRQESAVDSNGVKSIVEYHFNSNGAKVKRTTKVKVFTEHTRVHKSC---LERTKWNKFGLAAQVDDNSSYTIKSMEEIKMETPQESREADEKPNSMEDTLKEAMERMRRKHAMRTAGLLESTNESAPPEDESAGXXGMMGLGVGGAGKYVPPSRKVGFAGRGEAGP---EGASNPMSMGEDHTKIRVTNISEDTTEGDLRDLFSAFGRINRVYLAKDPETMQSRGFAFVSYYQKSDAESAMQALQGYGYDHLILKLEWAKPSLRDVAT----EGGLSGMRTSGYGERLAQDTKQQVSYASNLT 1631
            AWGDDD  +  LP R E+AV+  G K++VE+  N+   KVK T ++ V    TR  K+    ++R + N+FG+A Q  D+S+ TI +  + ++   +E  E D + N+ + ++ E  ++   +   +  G+ E    S PP D++A    + G+       YVPPS + G AG G AG      A+ P     D + +RVTNISE+TTE DL+ LF+ +GRI R+YLAKD ETM SRGFAFVS+  + DAE AM ALQG+GYDHLILK+EWAKPS          EGGLS   TSGYG+ LAQDTK++VSYASNLT
Sbjct:    2 AWGDDDDEEEALPARTETAVNEKGFKTVVEWSRNAAEQKVKTTKEIFVKVVETRESKAVQGRVQRLRNNRFGIAGQEKDDSNVTIVAHNDERVTLEEEGGENDTQQNAAKASMNEFAKKQMWRKLQQKYGV-EGEGGSMPPGDDAA-PAAVPGMRT----SYVPPSMR-GQAGAGVAGSALARMAAMPQYDDRDQSSLRVTNISEETTEADLQVLFAPYGRIARIYLAKDRETMISRGFAFVSFVHRQDAERAMGALQGHGYDHLILKIEWAKPSAPKPDAGGGGEGGLSSGYTSGYGKALAQDTKERVSYASNLT 310
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1489.3684.1 vs. uniprot
Match: A0A7S3Q9L9_9STRA (Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q9L9_9STRA)

HSP 1 Score: 219 bits (558), Expect = 6.450e-61
Identity = 147/342 (42.98%), Postives = 187/342 (54.68%), Query Frame = 3 
Query:  705 PGRQAWGDD--DXXDY--------------LPPRQESAVDSNGVKSIVEYHFNSNGAK--VKRTTKVKVFTEHTRVHKSCLERTKWNKFGLAAQVDDNSSYTIKSMEEIKMETPQESREADEKP-------NSMEDTLKEAMERMRRKHAMRTAGLLESTNESAPPEDESAGXXGMMGLGVGGAGKYVPPSRKVGFAGRGEAGPEGASN-----PMSMGEDHTKIRVTNISEDTTEGDLRDLFSAFGRINRVYLAKDPETMQSRGFAFVSYYQKSDAESAMQALQGYGYDHLILKLEWAKPSL-RDVATEGGLSGMRTSGYGERLAQDTKQQVSYASNLTRG 1637
            P    WGDD  D  DY              +PP   S VDS G+K +  Y  N +     +K  TK++V    TR H+   +R +W KFG AA  +D S+ TI S ++I +E P    +  E+        N  E   K+   ++ RK+ +   G   + +E         G  G  G+G    GKYVPPS + G    G  G  G ++     P+    D   IRVTNISEDTTE DL+ LF+ FGRI+RVYLAKD ETMQSRGFAFVS+  + DA  AM  LQGYGYDHLILKLEWA+PS  +D   EG       SGYG+ LAQDTK++VS+ASNLT G
Sbjct:    3 PAASRWGDDADDDDDYATTPIEQKTSTGITIPPTHTSRVDSKGIKLVTSYRANPSNPSGLLKTITKIRVNKVVTREHRDVEKRRQWRKFGQAAVDEDQSNVTIHSRDDIFLEDPNADNDLQEEDVAKALAGNLNEFWAKQQRRQLERKYDVDAPG---AGDEGVADGWAKVGADGKAGVG----GKYVPPSARGGKLAGGGGGLAGMASRLGDKPVQDNRDQNTIRVTNISEDTTEADLQALFAPFGRISRVYLAKDKETMQSRGFAFVSFVHREDAARAMDKLQGYGYDHLILKLEWARPSAPKDPGQEGT---QFRSGYGKALAQDTKEKVSFASNLTTG 334
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1489.3684.1 vs. uniprot
Match: A0A1Z5KQ86_FISSO (Eukaryotic translation initiation factor 3 subunit G n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQ86_FISSO)

HSP 1 Score: 211 bits (537), Expect = 3.310e-58
Identity = 145/335 (43.28%), Postives = 192/335 (57.31%), Query Frame = 3 
Query:  702 MPGRQAWGDDDXXD--------------YLPPRQESAVDSNGVKSIVEYHFNSNGAK--VKRTTKVKVFTEHTRVHKSCLERTKWNKFGLAA-QVDDNSSYTIKSMEEIKMETPQESREA-DEKPN-SMEDTLKEAMERMRRKHAMRTAGLLESTNESAPPEDESAGXXGMMGLGVGGA----GKYVPPSRKVGFAGRGEAGPEGASNPMSMGEDHTKIRVTNISEDTTEGDLRDLFSAFGRINRVYLAKDPETMQSRGFAFVSYYQKSDAESAMQALQGYGYDHLILKLEWAKPSL-RDVATEGGLSGMRTSGYGERLAQDTKQQVSYASNLTR 1634
            MP    WGD+D                  +PP  +S VDS G++ +  Y  N N     +K  TKVKV  E  R  K+  ER +W+KFG A     +N+  T++S +EI ME P    +  DE P  ++   L E   + +R+   R   +      +A P+D      G   +G G A    GKYVPP+ + G +G        A  P    +D   IRVTN+SE+T+E DL++LF+ +GRI+RVYLAKD ETMQSRGFAFVS+  +SDA  AM+ALQGYGYDHLILKLEWA+P+  +D AT G  +  R SGYG+ LAQDT  +VSYASNLT+
Sbjct:    1 MPITPRWGDEDDDSDDEQQRVHRDPKQVVIPPTHKSRVDSKGIQVVTSYRLNPNNHSQLLKTVTKVKVSVERVREAKAVEERRQWSKFGQALIDEKENTKTTVQSKDEILMEDPHADTDLQDEDPGKAIAGNLNEFWAKQQRRQLERKYDV----TGNAEPQDA-----GWTQVGTGAAAPSTGKYVPPAARGGASGG-----SSAFKPERRMDDLNTIRVTNLSENTSEHDLQELFARYGRISRVYLAKDKETMQSRGFAFVSFVMQSDAAKAMEALQGYGYDHLILKLEWARPNAPKDPATSG--TEFR-SGYGKALAQDTTAKVSYASNLTK 318
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1489.3684.1 vs. uniprot
Match: A0A7S2R562_9STRA (Eukaryotic translation initiation factor 3 subunit G n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R562_9STRA)

HSP 1 Score: 203 bits (517), Expect = 2.450e-55
Identity = 138/325 (42.46%), Postives = 179/325 (55.08%), Query Frame = 3 
Query:  711 RQAWGD-DDXXDYLPPRQESAVDSNGVKSIVEYHFNSNGAKVKRTTKVKVFTEHTRVHKSCL-ERTKWNKFGLAAQVDDNSSYTIKSMEEIKMETPQESREADEKPNSMEDTLKEAMERMRRKHAMRTAGLLESTNES--APPEDESAGXXGMMGLGVGGAGKYVPPSRKVGFAGRGEAGPEGASNPMSMGE------DHTKIRVTNISEDTTEGDLRDLFSAFGRINRVYLAKDPETMQSRGFAFVSYYQKSDAESAMQALQGYGYDHLILKLEWAKPSLRDVATEGGLSGMRT-------SGYGERLAQDTKQQVSYASNLTR 1634
            ++ WGD ++   YLP   E+AVD+ G+K+  EY  N    K+K   K++V     R+ K+ +  R +  KFG      D S+ TI    E+KM  P   ++AD++       +K A E  ++K   R        +E    P +DE     G         GKYVPPS + G  G G     G+   M++ E      D   IRV+N+SEDT E DL+DLF  FG I R+YLAKD ETM SRGFAFVS+ ++ DAE AM  LQGYGYDHLIL+LEWAKPS R    EGG             SGYG+ LAQDT Q+VS+ASNLTR
Sbjct:    7 KKNWGDAEEDEGYLPEPVETAVDAKGIKTRTEYRLNDLQQKIKVVKKIRVRHNELRLSKAAVARRARLEKFGNVRSGGDESNSTIVDYNEVKMVHP---KQADQEDEGQAANVKNAFEAFQKKQQWRALHRKYDGDEGDLPPGDDEGEARMGXXXXXXXXXGKYVPPSLR-GXXGAGTGLRTGSLATMTVDESSIDEKDLKTIRVSNLSEDTKEADLQDLFQPFGSIFRIYLAKDKETMTSRGFAFVSFNRREDAEVAMNKLQGYGYDHLILRLEWAKPSGR----EGGAXXXXXXXXXQFRSGYGKALAQDTDQKVSFASNLTR 323
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1489.3684.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTT6_ECTSI1.740e-10862.50Putative initiation factor eIF3 g subunit n=1 Tax=... [more]
A0A835YJN9_9STRA5.550e-9656.47Eukaryotic translation initiation factor 3 subunit... [more]
A0A6H5KD36_9PHAE1.970e-7990.00eIF3g domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S2GQ53_9STRA1.980e-6846.60Eukaryotic translation initiation factor 3 subunit... [more]
F0YAL4_AURAN4.940e-6248.90Eukaryotic translation initiation factor 3 subunit... [more]
A0A6U5KZ42_9STRA2.270e-6144.06Eukaryotic translation initiation factor 3 subunit... [more]
A0A8J2SWG8_9STRA4.290e-6145.25Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3Q9L9_9STRA6.450e-6142.98Eukaryotic translation initiation factor 3 subunit... [more]
A0A1Z5KQ86_FISSO3.310e-5843.28Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2R562_9STRA2.450e-5542.46Eukaryotic translation initiation factor 3 subunit... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1489contigH-canaliculatus_F_contig1489:992..8060 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score344.7
Seed ortholog evalue4.4e-92
Seed eggNOG ortholog2880.D8LTT6
Preferred nameTIF35
KEGG koko:K03248,ko:K05666,ko:K20304
KEGG TC3.A.1.208.2
KEGG Pathwayko01523,ko01524,ko02010,ko03013,ko04976,map01523,map01524,map02010,map03013,map04976
GOsGO:0001732,GO:0002181,GO:0002183,GO:0002188,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005852,GO:0006412,GO:0006413,GO:0006415,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010494,GO:0016043,GO:0016282,GO:0019538,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0032984,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0035770,GO:0036464,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043614,GO:0043624,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070993,GO:0071540,GO:0071541,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
EggNOG free text desc.translation initiation factor activity
EggNOG OGsKOG0122@1,KOG0122@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko03012,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionputative initiation factor eIF3 g subunit
Ec32 orthologEc-28_002840.1
Exons8
Model size2513
Cds size942
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1489.3684.1prot_H-canaliculatus_F_contig1489.3684.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1489 1862..6732 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929230.172049-UTR-H-canaliculatus_F_contig1489:991..18611622929230.172049-UTR-H-canaliculatus_F_contig1489:991..1861Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1489 992..1861 -
1696845726.8697426-UTR-H-canaliculatus_F_contig1489:991..18611696845726.8697426-UTR-H-canaliculatus_F_contig1489:991..1861Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1489 992..1861 -
1622929230.2648602-UTR-H-canaliculatus_F_contig1489:6732..67451622929230.2648602-UTR-H-canaliculatus_F_contig1489:6732..6745Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1489 6733..6745 -
1696845726.9545474-UTR-H-canaliculatus_F_contig1489:6732..67451696845726.9545474-UTR-H-canaliculatus_F_contig1489:6732..6745Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1489 6733..6745 -
1622929230.2790587-UTR-H-canaliculatus_F_contig1489:7359..76711622929230.2790587-UTR-H-canaliculatus_F_contig1489:7359..7671Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1489 7360..7671 -
1696845726.9661078-UTR-H-canaliculatus_F_contig1489:7359..76711696845726.9661078-UTR-H-canaliculatus_F_contig1489:7359..7671Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1489 7360..7671 -
1622929230.325726-UTR-H-canaliculatus_F_contig1489:7684..80601622929230.325726-UTR-H-canaliculatus_F_contig1489:7684..8060Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1489 7685..8060 -
1696845726.9770794-UTR-H-canaliculatus_F_contig1489:7684..80601696845726.9770794-UTR-H-canaliculatus_F_contig1489:7684..8060Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1489 7685..8060 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929230.1922934-CDS-H-canaliculatus_F_contig1489:1861..19811622929230.1922934-CDS-H-canaliculatus_F_contig1489:1861..1981Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1489 1862..1981 -
1696845726.8853042-CDS-H-canaliculatus_F_contig1489:1861..19811696845726.8853042-CDS-H-canaliculatus_F_contig1489:1861..1981Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1489 1862..1981 -
1622929230.2040946-CDS-H-canaliculatus_F_contig1489:2283..24401622929230.2040946-CDS-H-canaliculatus_F_contig1489:2283..2440Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1489 2284..2440 -
1696845726.8972178-CDS-H-canaliculatus_F_contig1489:2283..24401696845726.8972178-CDS-H-canaliculatus_F_contig1489:2283..2440Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1489 2284..2440 -
1622929230.21651-CDS-H-canaliculatus_F_contig1489:3891..41181622929230.21651-CDS-H-canaliculatus_F_contig1489:3891..4118Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1489 3892..4118 -
1696845726.9084682-CDS-H-canaliculatus_F_contig1489:3891..41181696845726.9084682-CDS-H-canaliculatus_F_contig1489:3891..4118Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1489 3892..4118 -
1622929230.2265613-CDS-H-canaliculatus_F_contig1489:5412..56191622929230.2265613-CDS-H-canaliculatus_F_contig1489:5412..5619Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1489 5413..5619 -
1696845726.921602-CDS-H-canaliculatus_F_contig1489:5412..56191696845726.921602-CDS-H-canaliculatus_F_contig1489:5412..5619Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1489 5413..5619 -
1622929230.236546-CDS-H-canaliculatus_F_contig1489:5953..60551622929230.236546-CDS-H-canaliculatus_F_contig1489:5953..6055Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1489 5954..6055 -
1696845726.932514-CDS-H-canaliculatus_F_contig1489:5953..60551696845726.932514-CDS-H-canaliculatus_F_contig1489:5953..6055Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1489 5954..6055 -
1622929230.2517872-CDS-H-canaliculatus_F_contig1489:6603..67321622929230.2517872-CDS-H-canaliculatus_F_contig1489:6603..6732Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1489 6604..6732 -
1696845726.9433525-CDS-H-canaliculatus_F_contig1489:6603..67321696845726.9433525-CDS-H-canaliculatus_F_contig1489:6603..6732Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1489 6604..6732 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1489.3684.1

>prot_H-canaliculatus_F_contig1489.3684.1 ID=prot_H-canaliculatus_F_contig1489.3684.1|Name=mRNA_H-canaliculatus_F_contig1489.3684.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=314bp
MPGRQAWGDDDDDDYLPPRQESAVDSNGVKSIVEYHFNSNGAKVKRTTKV
KVFTEHTRVHKSCLERTKWNKFGLAAQVDDNSSYTIKSMEEIKMETPQES
READEKPNSMEDTLKEAMERMRRKHAMRTAGLLESTNESAPPEDESAGGG
GMMGLGVGGAGKYVPPSRKVGFAGRGEAGPEGASNPMSMGEDHTKIRVTN
ISEDTTEGDLRDLFSAFGRINRVYLAKDPETMQSRGFAFVSYYQKSDAES
AMQALQGYGYDHLILKLEWAKPSLRDVATEGGLSGMRTSGYGERLAQDTK
QQVSYASNLTRGS*
back to top

mRNA from alignment at H-canaliculatus_F_contig1489:992..8060-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1489.3684.1 ID=mRNA_H-canaliculatus_F_contig1489.3684.1|Name=mRNA_H-canaliculatus_F_contig1489.3684.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=7069bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1489:992..8060- (Hapterophycus canaliculatus Oshoro5f female)
GTAGGACAGAGAGGGGAGAAGGCTTGCTGCGGTGACTGGATCGAAAGCTC
CTTTCTTCTTTGACCAAGGTGAGCACGCCACATGTATGTGAGCCATTGCA
CATTGCTCGGTAGACCGTCCGATTGTTTATATGTGTGTGTTGACCTCTCA
GTGGTGGCAGCGTGTTGGTGAATGGCGGTGGGAGCGAAGTTGCGCTGTTG
CTCTCCCTGTGCCCCAAGCTGAAGAGACTTGAACCTTCTTGGTTATTCTC
GTTCAGTCCCCATGTATGGGCCGCCCTTGTTTCTTCCAAAAACGCTTGGA
GTTACGGCGGTGGGTACCGAAGGGTTGTGCGTGGCGGCCGGACGTGATTT
TTCCAACATCTCTCGTTTTTGAATAACCCCTTCTCCGAGGCAAGAGAACG
TGATCGAGAACTGGAATACCTCCAACACCAGATCTCACTGTTTCTGCGCG
TACCTGTGTATAGTCCCCACTGGTGGTGAATAGGACGAGTAGCACAAGTG
CTACTGGTTATGCGTGTTTCGAAACCTTAAAAAAATATACCATCCACGGC
GGTACTTTCTCGCGCAACAGCTGTTGCAATTCGTTGGAAAGGGCACCCAG
ACGATTTTGCATTTTACTCCTACAGCACTCCGAGCACCAACTGAACCTCC
TGAAATCAGTCATCTTTCATTTCTCAAGCGTGTGTGGGTTTTGTTCGAGA
AGCAAGAGTTGGCGATCAGACATCAAGTTCGAGTTCTACCCACGTCAGTT
TAAATAAAACTGCGGCGGTGGGGGGGCTCGACATTTCGGGCGCTGTCCTT
TGGGCATGTCGTGCGCCGAGGTTGAGCTCAGTGTCGCGTAGCGTCATCCC
CGCTACTTGAAATCCATACAAGTACAAGTACCAGATGCCTTTCTGCGTCG
CGCGCAGCTCGGGGGTAGCGCAAGTACGACAAGTTCGGGAACCGTGCTCG
AGACAAGCCTGCCCTCGTTAAGGTTGAATAAAGAAATCGCGCGAGCCCGC
ACAGCACAGCCAGCTGAGAGGGTTATAGTTCTTCTGCCTTCAACCGGGAA
AGAAGACTGCGCACCGTGTACTACTCTCTCGACTCTGTGTCTTTTCCATC
CCTCCATCCCTACCCCTGTATGCCCGGTTTGATACCTCCGTCACCTTCCG
AGAGGAAGCGTATGCCACTTCCACCGCTTTCTCCATGACGAGAGCTACAA
AGTTTCTTTGTGGTCGGCGACCAAATCGTTTCGCATGCCCGTTGACACGC
ACGCGCCATGCGTCGTTTCCCCACGGACGCGCTCCGCGTTGCCTATCGAA
CGCCCTCCGCCCCAGACTCCGCTCCATCATGCCTGGACGACAAGCGTGGG
GTGATGATGACGATGACGACTACTTGCCGCCGCGCCAAGAGTCGGCGGTG
GACTCGAACGGGGTTAAGAGCATCGTGGAGTACCACTTCAATTCCAACGG
AGCCAAGGTGAGGCGGAGAACTACCAGGCAAGGCTGTCGTCATGACGCAG
ACGCAGTTTCACCAACAACCGCGCCAAAAACGCTGAAAGCCAAAGGACGT
GGTTCCGGTTCCGGTCTCTGGTTCGAGAGAACGACGAACACCCTGCCCTG
GCACAGTCGATTGCGCCTGGCCTTTTCGACCGACGCCTTTTTTAGTGCTA
CCCACTTTTCAGGGGCAGGGGTGTCGCCGTGGACGTGTGACCTCGGCAAT
CCACCCCGACAGCCGTCGCTACGGCTACATCTGCCGCCTTGCACCGTTTC
CAGTAATCTTAGACCCGGTTTCTTGTAGCTCTGTGCAGATGCCACCATCG
CGCCCCACCCGCGGCCATGAATCCCGCGCCTCTTCCCGCGTTGTTCTGCC
TGTACCGCTGCTCTTCGTTTGGTGCCGGAGCTGCGATCACGTACACCAAC
GAGGGATGCCGAGACCGCTTGTGCCCCTCATGTCGACTGGCGTTCATCGG
CCCCTGTATAGCCTTCTCTTCTTCCAACTGAAACACGAAAATCAAACACA
ACCAGGTGAAGAGGACGACGAAGGTGAAGGTCTTCACGGAGCACACGAGA
GTGCACAAGTCTTGCCTGGAGCGCACGAAGTGGAACAAGTTCGGACTCGC
CGCCCAGGTGAGGCCTGGAGCAGCGTGCACAAGGCGGCGTTCTCACGTTG
TAGAGTGTTCTTGGTTACTCTGTATAAGGTCGGGAGGAGGCCCGCTGTCG
TTGATAGTAGACCAACGATGTTGTGCCCCTTCCTGGCCCCACCCCACCCC
CCTCCCCTCGCCCGGTGGTGCTCCTAGGGTTTAGAGCTCGATCGAGTGGA
GGGGGAGTGAGGCCCGGTGAATGTCGTACCGTCGACATCGCTGCCAATCG
TCAAGGGTTGGCTGCACGCGAAGAGGACAGAATACCGAATCATGCACCCC
CCATCCCACCCCAATCGCCCTCCACCGCCCCCCCGCCCCAGGTGGACGAC
AACTCGAGCTACACCATCAAGTCGATGGAGGAGATCAAGATGGAGACCCC
GCAGGAGTCGAGGGAGGCGGACGAGAAGCCCAACAGCATGGAGGACACTC
TCAAGGAGGCCATGGAGCGCATGCGGCGGAAGCACGCTATGAGGACGGCG
GGACTGCTCGAGTCCACCAATGAATCGGCACCTCCGGAGGACGAGTCGGT
AAGGACCCACATCAAGGCGAGGGGGAGGAGATGGTGCGGGGTAGAGGCGA
GGATGTGTGCTATCCTTGTGGGCGTCCAGGGTGGAGGTTCACCCTTGGAG
TGGGTGCCTCTTCGAAGCGTCGGAGACGGATCGGAGGCGGATATCAAGAG
AGAGATGACGGGCGATGTGGAGGAGAGAGGGTGGTTGGATTGATGGGCTC
AACCCAAAGTCGCTCGAAGCTCCCTCCAGCGGGAGATGCGTCTGTCTCAT
CGGTGTGCGTGTCTTGAACCTTTTTTGTCGTCTCGGGTCTGACAACACAC
AGCACCATGGGCATTCAGGTGTCTTTCGGTCATGCGCAGCAGAGGGGACG
GCGAGCTTGCACGAATTGCTTGTGGACGGATTTGTTTCTGTGTCGAACCC
GTGTGGTTGCGTTCGGGGGCAGAAGCACCAGCGCGAACGCTGGTTGCCTT
CGTCCTATCCCGGCCTCGCGTTCCAGGAGGAAGGGCAACACGTCGACGAC
GGGGAGACAGATCCTGTGCCCGTGCTCCGCCCTTCCCCATCCTGGACTCG
CTCGTGATGTTCCACACACCTTTTGCGTCGTGCGGGTGGCGACAGGACTC
GTGCACGCGGGTGCACGCAGCTCCCTCCGCACGAAGAAGAAGAAGAAGAT
CGCCCTCCCCCTCGTCGTGTTCGTGTGTTGTACCCTCTTCAGGCATACGC
CTCTACACCTAGAGACCGTGGTGATCAACACACGTTCGTTCGTCGCTGGT
CGGGACCCTGTCGTCGCTGGAGATGAGTGCATGGCCCGTGCTGGGTATTG
GCCGGTGTCGCCTTGCTGTCGGTCTTCTCCACTTCCCCAGCCGGAACAAG
CAAGAGAACTCCATGCGCAGCACAAAACGGCGGGACTCGCAAGCCCAGGC
GTTGTTTCACATCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCC
CCACACCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCGCCCCCCCCCGCG
CCCCCCCCCCCCCGGCGCCAAAAGAAAAAACCCCCCGCCCCCCAACCCCC
CCCGCCGCCCCCCCACCCCGGCCTGTTTTCCCCCCCCCCCCCCCCCCCCC
CCCCCCGCTCGACTCAAAAATAGCACATGCGCCGATTCCATCCTTCTCCG
TACCCTGCGGCAGCCTGTTTATGCTCCCTGCCCCGTTCTCCTTGCTGCCT
TTTTTCCGTGTTGCGCTGTCCCCGTTGTACGGTGTTTGCCCCTGCGCACC
TCCTCCTTTCCCTTTCTCCACCCACCGGCAAACTGCCAGAAGGCCGGCGG
CGGAGGCATGATGGGCCTGGGCGTCGGCGGGGCCGGCAAGTATGTGCCAC
CGAGCAGAAAGGTTGGCTTCGCCGGCAGGGGAGAGGCGGGGCCGGAGGGG
GCGTCCAACCCCATGTCCATGGGCGAAGACCACACCAAGATCAGGGTGAC
GAACATCAGCGAGGACACGACGGAGGGGGATCTGAGAGATCTCTTCAGCG
CCTTCGGGAGGATCAACCGGTCAGTTGCTTGTGCTTGTGCTCGTGCGTGT
GTGTAGTGGGAGGGGGGTGGGAGGGGCTCGTGCGCACCTATGTGTGTGTG
TTTCGATCGGTTTGGATCCCTATGGCCGACCGACCGATCGAGAGAGATAT
GCCAGGCTCGATGGAGCAATGATTCAAGGATCCACTTCCTAGATTGCAGG
GTCTGTCAAGACTAGCACCCGGGATGGATGCGATGCTGCACGACGGAACA
GGCGCACCTGTTGTTTTTTCCCCGTTCGTGCTGTCGCGAGCCCCAACGTT
GTGTTTGCTGTGACCGGCCAGCTATGACTCGGCTGCACGCGACCGAAGCG
GTTGCATATCAGATATTCTGGGCGATAAGCGTTCATGTCTTGTGTCTTCG
TGGCTCACTATCCTTGTCAGCTACGGCAAATAACGGAGACCCCGAGTGTC
CGCATGCACGTGTAGTATTTCCCTTCCCAGCGTTGCTTGGCAGTGCTTGA
TATGAGGTACCTGGTATGTATTGAAGAAGTAATCGTTCTTCTCGAACAGG
CCGTGGAGTTGTGGATAGGTACACAGGCGCACCCGGCCTTGAAAAGATCA
AAAAGAGGAGCGTTTCGTGTGTGCCGGCAGGAGGAAGTCGTTCCCTATCC
GCAACAGCAGTTCGACATTAGGTCGTGCTATCGCCATCGAATCGAAAACG
CGGAAGCATTCGCACAGTTTGTAGGAGTCTTGGGTCGGGGTATGCCACGT
AGGGCGATCGTCGATTCATGCCTATGCTTCGTATTTCATGGGTTTGACCC
ACCTGTTGGACTTTTCGTCAACACTCCTGACTATTTGAAGTGTTCCGTCT
CGCCTCTCGATTTATTCTTCTTACACGATGAACGTTTGATCGTCGTCGTC
TTCATCGTGCAAGAGACGCTACTTGTCCCGACGGTGGTTGCCGCATACCT
CCCCCGCCGCTTGGTGCGCATTTCGAACGCGTGGCAATGGCATTCCGCCA
AGCACCTGGGGTAGTGTCTTATTCCGTCCTCGAGCATCTTCCGCCTCGAA
GTTGTGCTAGGGTAGTAAGTTGCCGAGAACGCACACATCGTCGCTGATCC
CGTGATTCCGCGACGTACTTTTGTCCGTCTTCTTTTTAGTCTCTTGCCGT
GGAATCGCGCCACGCCCAGACTTTCCTATCCCCTCGCACCCCGGCATCTA
ATTTCTGGCTGGTCATCCCTTTTGAAGCTGTCGCGATCATCCCTGATGCG
GGTATACGACTCACGGGCCTGTTCTTTCGCTGCGTTTCGCCTACTTCACC
TTGCCTCGGTGCCTCCTTCGCACCTTCTTGACCACGTTAGACTTTTGTGC
TGTTCAAGCCCACCCTCCCCTCAGACCACCATCCTAAACGTGAGCCTCTG
GTCATGCGTCGCTCCCCGGTTGCCCCTGGGCTTGCACGTCCGCGTCCACC
CAACCCTAAACCACGAACAGGGTGTACCTTGCGAAGGATCCCGAGACGAT
GCAGAGCAGGGGCTTCGCATTCGTGTCGTACTATCAGAAGAGCGACGCTG
AGTCGGCCATGCAGGCCCTGCAGGGGTACGGGTACGACCACCTCATCCTC
AAGCTGGAGTGGGCCAAGCCGAGCCTGGTGAGAGCGGCGTGTGCTTGGTT
GTATGCGGTCGTCCGTACATTGTTTCTTGGAATTTTTTGGTTGGGCGAGC
GGCCCACGCTTAGCTCATGGCGCGCTGCTTCGAGTGAGTGAAGTGCTTTT
TAGCTCGTGTGGCTCGCGCGTTGGTTTTTCCTACGCCGTTGTTCCTGTCA
ACTTGTGATAACCCAGCCCTGATTGTCCTGCCGAAGTAGTACCCTCGGAG
TCGGCGGTAACGGTTCAACGTTTTCACAATATTTTGTCCCATCCCGAAAA
AACATGCTCTCCTTGAAAAACCTTGGCAGCGGGATGTCGCGACCGAGGGC
GGACTGAGCGGCATGCGCACGAGCGGGTACGGAGAGCGCTTGGCCCAGGA
CACGAAGCAGCAAGTATCGTACGCTTCGAACCTTACGCGCGGAAGCTGAG
AAGCTTGTGCCCTTCATGTCATCTGTACGCGTGGGGCGTTTGGGTTCGGC
CACAAGATCATTTCGTCGCAGGTGTTCGTTTCGGCGTAGAGCGTGGAGGC
TTCCGTGCCCAGGCGTTGTTGTTTCCCCGTTGAATCAAGCTGGCAACTCC
CCTGGCCACGTTGTCGAGACACGCTGAAGGCGTTTCTCTTGCTGAAGAGC
AGATTGAGAGTCATCCTTGCGTTCGGTGCCTTGTGTTGGATGTCGAGAGT
GTTCGTGTACGTCGCAGTGTCACGCGGCAAGTATGTGCAGCCTTGGTTCA
ATCAGGGTCAGCAGGACACGAACCACGTGCTAGCAGGCATATCGAGTCCT
TTCTCCCCCAAATCAGGATATTTTCGCGGGCGCCTGTGTTTGTCGGCAGC
GTTTGCGCCCTGTGTCCGTGAAGGAAATCCGAAGCAGTGCTTTCCGACAG
TGCAGGCTGTGCAAGATGCAACCGGGTTGCGAAGCGGTCGAACGCGGAGA
TCGTGCTCGGCACAACCTTCAAGTTCCCAATTTGAATGGGCCAGGCCAAT
CACTCCAAATTGTCCGGCGTTCCGGACCCAAGGAAATCAAGAGGCGCTGA
GTGAGTGTGTGGGCGTTGCCACATTTATGTTCATGCGCTGCCAAGGTACC
ATTACTCTGTTTTCGACCTCGAAAGCCCCTGCCCCAAAAAGTGGCTGTAG
CACACGAAGGACAGGGCTGCGACGACCTTCAGGCTGTGGTGCCTCGACAA
TTATGAGCCATCGAGAGACCAGGAGAACTCACCAGGCACGGAATGTACGT
TTGTGCCCCAGAATGTGTTTGCCTCGGAGGTCCCGATACTGCCAACTGCC
GCCCTGTGGTCCTTCCATA
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1489:992..8060-

>mRNA_H-canaliculatus_F_contig1489.3684.1 ID=mRNA_H-canaliculatus_F_contig1489.3684.1|Name=mRNA_H-canaliculatus_F_contig1489.3684.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1884bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1489:992..8060- (Hapterophycus canaliculatus Oshoro5f female)
ATGCCTGGACGACAAGCGTGGGGTGATGATGACGATGACGACTACTTGCC
GCCGCGCCAAGAGTCGGCGGTGGACTCGAACGGGGTTAAGAGCATCGTGG
AGTACCACTTCAATTCCAACGGAGCCAAGATGCCTGGACGACAAGCGTGG
GGTGATGATGACGATGACGACTACTTGCCGCCGCGCCAAGAGTCGGCGGT
GGACTCGAACGGGGTTAAGAGCATCGTGGAGTACCACTTCAATTCCAACG
GAGCCAAGGTGAAGAGGACGACGAAGGTGAAGGTCTTCACGGAGCACACG
AGAGTGCACAAGTCTTGCCTGGAGCGCACGAAGTGGAACAAGTTCGGACT
CGCCGCCCAGGTGAAGAGGACGACGAAGGTGAAGGTCTTCACGGAGCACA
CGAGAGTGCACAAGTCTTGCCTGGAGCGCACGAAGTGGAACAAGTTCGGA
CTCGCCGCCCAGGTGGACGACAACTCGAGCTACACCATCAAGTCGATGGA
GGAGATCAAGATGGAGACCCCGCAGGAGTCGAGGGAGGCGGACGAGAAGC
CCAACAGCATGGAGGACACTCTCAAGGAGGCCATGGAGCGCATGCGGCGG
AAGCACGCTATGAGGACGGCGGGACTGCTCGAGTCCACCAATGAATCGGC
ACCTCCGGAGGACGAGTCGGTGGACGACAACTCGAGCTACACCATCAAGT
CGATGGAGGAGATCAAGATGGAGACCCCGCAGGAGTCGAGGGAGGCGGAC
GAGAAGCCCAACAGCATGGAGGACACTCTCAAGGAGGCCATGGAGCGCAT
GCGGCGGAAGCACGCTATGAGGACGGCGGGACTGCTCGAGTCCACCAATG
AATCGGCACCTCCGGAGGACGAGTCGGCCGGCGGCGGAGGCATGATGGGC
CTGGGCGTCGGCGGGGCCGGCAAGTATGTGCCACCGAGCAGAAAGGTTGG
CTTCGCCGGCAGGGGAGAGGCGGGGCCGGAGGGGGCGTCCAACCCCATGT
CCATGGGCGAAGACCACACCAAGATCAGGGTGACGAACATCAGCGAGGAC
ACGACGGAGGGGGATCTGAGAGATCTCTTCAGCGCCTTCGGGAGGATCAA
CCGGCCGGCGGCGGAGGCATGATGGGCCTGGGCGTCGGCGGGGCCGGCAA
GTATGTGCCACCGAGCAGAAAGGTTGGCTTCGCCGGCAGGGGAGAGGCGG
GGCCGGAGGGGGCGTCCAACCCCATGTCCATGGGCGAAGACCACACCAAG
ATCAGGGTGACGAACATCAGCGAGGACACGACGGAGGGGGATCTGAGAGA
TCTCTTCAGCGCCTTCGGGAGGATCAACCGGGTGTACCTTGCGAAGGATC
CCGAGACGATGCAGAGCAGGGGCTTCGCATTCGTGTCGTACTATCAGAAG
AGCGACGCTGAGTCGGCCATGCAGGCCCTGCAGGGGTACGGGTACGACCA
CCTCATCCTCAAGCTGGAGTGGGCCAAGCCGAGCCTGGGTGTACCTTGCG
AAGGATCCCGAGACGATGCAGAGCAGGGGCTTCGCATTCGTGTCGTACTA
TCAGAAGAGCGACGCTGAGTCGGCCATGCAGGCCCTGCAGGGGTACGGGT
ACGACCACCTCATCCTCAAGCTGGAGTGGGCCAAGCCGAGCCTGCGGGAT
GTCGCGACCGAGGGCGGACTGAGCGGCATGCGCACGAGCGGGTACGGAGA
GCGCTTGGCCCAGGACACGAAGCAGCAAGTATCGTACGCTTCGAACCTTA
CGCGCGGAAGCTGACGGGATGTCGCGACCGAGGGCGGACTGAGCGGCATG
CGCACGAGCGGGTACGGAGAGCGCTTGGCCCAGGACACGAAGCAGCAAGT
ATCGTACGCTTCGAACCTTACGCGCGGAAGCTGA
back to top