mRNA_H-canaliculatus_F_contig14859.3675.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14859.3675.1 vs. uniprot
Match: D8LH37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH37_ECTSI) HSP 1 Score: 207 bits (527), Expect = 1.700e-66 Identity = 104/144 (72.22%), Postives = 125/144 (86.81%), Query Frame = 1
Query: 1 MDQKSTLLFPPGTVKLKNIVTNYASLTGSDKWTLQSIMLLIFRVVLQDCRAMKRNMKRRDINSLREIFGTDEEVLDVLRELIKVASHLSFAVRAPSLNDPELDNLDLMARDVVGFYSKVMGRTGSRPTIHSILHTVEAVRRHGE 432
M Q +LL+P GT +LK+IV+NY+SLTGSDKWTLQSIMLL+FR VL MK+NMKR+D+N LRE++GTD +VL+VL++L++VASHLS+AVRAPS ND EL LDL+ARDVVGFYSKVMGRTGSRPTIHSILHT EA+R HGE
Sbjct: 1 MSQTPSLLYPAGTERLKDIVSNYSSLTGSDKWTLQSIMLLVFRPVL----VMKKNMKRQDVNDLREMWGTDGKVLEVLQQLVQVASHLSYAVRAPSHNDRELSQLDLLARDVVGFYSKVMGRTGSRPTIHSILHTTEAIRAHGE 140
BLAST of mRNA_H-canaliculatus_F_contig14859.3675.1 vs. uniprot
Match: A0A6H5J9E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9E1_9PHAE) HSP 1 Score: 202 bits (513), Expect = 1.840e-57 Identity = 101/141 (71.63%), Postives = 123/141 (87.23%), Query Frame = 1
Query: 7 QKSTLLFPPGTVKLKNIVTNYASLTGSDKWTLQSIMLLIFRVVLQDCRAMKRNMKRRDINSLREIFGTDEEVLDVLRELIKVASHLSFAVRAPSLNDPELDNLDLMARDVVGFYSKVMGRTGSRPTIHSILHTVEAVRRHG 429
Q +LL+P GT +LK+IVTNY+SLTGSDKWTLQSIMLL+FR VL + AMK+NMKR+DI LR+++GTDE+VL+VL++LI+VASHLS AVRAPS ND EL LDL+ARDVVG YSKV+GRTGSRPTIHS+LHT +A+R HG
Sbjct: 560 QNPSLLYPAGTERLKDIVTNYSSLTGSDKWTLQSIMLLVFRPVLANVGAMKKNMKRQDIAELRDVWGTDEKVLEVLQKLIEVASHLSCAVRAPSHNDLELAQLDLLARDVVGVYSKVLGRTGSRPTIHSVLHTSQAIRAHG 700
BLAST of mRNA_H-canaliculatus_F_contig14859.3675.1 vs. uniprot
Match: A0A6H5KXT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT2_9PHAE) HSP 1 Score: 183 bits (465), Expect = 1.740e-55 Identity = 97/144 (67.36%), Postives = 114/144 (79.17%), Query Frame = 1
Query: 1 MDQKSTLLFPPGTVKLKNIVTNYASLTGSDKWTLQSIMLLIFRVVLQDCRAMKRNMKRRDINSLREIFGTDEEVLDVLRELIKVASHLSFAVRAPSLNDPELDNLDLMARDVVGFYSKVMGRTGSRPTIHSILHTVEAVRRHGE 432
M QK LL+PPGT KLK+IVTNY SLTGSDKWTLQSIMLL+FR+VLQ+ AM R +IN L+ +GT E+VL+ LREL+K AS LS A+RAPS +PEL LD +ARD VG + K+MGRTGSRPTIHSILHTVEA+R HGE
Sbjct: 115 MAQKPPLLYPPGTEKLKDIVTNYTSLTGSDKWTLQSIMLLVFRMVLQNVPAMTR-----EINDLKAEWGTYEDVLEALRELLKRASLLSIALRAPSFTEPELLQLDKLARDAVGAFFKIMGRTGSRPTIHSILHTVEAIRLHGE 253
BLAST of mRNA_H-canaliculatus_F_contig14859.3675.1 vs. uniprot
Match: A0A6H5K9M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M0_9PHAE) HSP 1 Score: 189 bits (479), Expect = 8.370e-53 Identity = 96/143 (67.13%), Postives = 117/143 (81.82%), Query Frame = 1
Query: 1 MDQKSTLLFPPGTVKLKNIVTNYASLTGSDKWTLQSIMLLIFRVVLQDCRAMKRNMKRRDINSLREIFGTDEEVLDVLRELIKVASHLSFAVRAPSLNDPELDNLDLMARDVVGFYSKVMGRTGSRPTIHSILHTVEAVRRHG 429
M QK +LL+PPGT K+K+IVTNYASLTGSDKWTLQSIMLL+FR+VLQ+ AM+RNM R+IN L+ +GT E +L+ LREL+ +S LSFA+RAPS +PEL LD +ARD V +SK+MGRTGSRPTIHSILHTVE +R HG
Sbjct: 851 MAQKPSLLYPPGTGKIKDIVTNYASLTGSDKWTLQSIMLLVFRMVLQNVPAMRRNMNTREINGLKAEWGTYEGLLEALRELMIRSSLLSFALRAPSFTEPELRQLDKLARDAVEAFSKIMGRTGSRPTIHSILHTVETIRLHG 993
BLAST of mRNA_H-canaliculatus_F_contig14859.3675.1 vs. uniprot
Match: A0A6H5KLQ7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLQ7_9PHAE) HSP 1 Score: 187 bits (476), Expect = 8.530e-53 Identity = 97/145 (66.90%), Postives = 119/145 (82.07%), Query Frame = 1
Query: 1 MDQKSTLLFPPGTVKLKNIVTNYASLTGSDKWTLQSIMLLIFRVVLQDCRAMKRNMKRRDINSLREIFGTDEEVLDVLRELIKVASHLSFAVRAPSLNDPELDNLDLMARDV--VGFYSKVMGRTGSRPTIHSILHTVEAVRRHG 429
M QKS+LL+PPGT KLK+I+T+Y SLTGSDKWTLQSIMLL+FRVVLQD +M+RNMK+RD+ + + +GT E VLD LR LI++ S LSFA+RAPS ND EL LD +ARD VG +S++MGRTGSRPTIHS+LH VEA+R HG
Sbjct: 283 MAQKSSLLYPPGTDKLKDILTDYPSLTGSDKWTLQSIMLLVFRVVLQDIPSMRRNMKKRDMKAFKAEWGTYESVLDALRTLIQMVSLLSFALRAPSYNDKELRQLDNLARDAPGVGAFSQMMGRTGSRPTIHSMLHAVEAIRLHG 427
BLAST of mRNA_H-canaliculatus_F_contig14859.3675.1 vs. uniprot
Match: A0A6H5JWD2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWD2_9PHAE) HSP 1 Score: 164 bits (416), Expect = 2.480e-49 Identity = 85/123 (69.11%), Postives = 103/123 (83.74%), Query Frame = 1
Query: 1 MDQKSTLLFPPGTVKLKNIVTNYASLTGSDKWTLQSIMLLIFRVVLQDCRAMKRNMKRRDINSLREIFGTDEEVLDVLRELIKVASHLSFAVRAPSLNDPELDNLDLMARDVVGFYSKVMGRT 369
M Q +LL+P GT +LK+IV+NY+SLTGSDKWTLQSIMLL+FR VLQD RAMK+NMKR+DIN LREI+GTD +VL+VL++L++VASHLS+AVRAPS ND EL LDL+ARDVV GRT
Sbjct: 45 MSQTPSLLYPAGTERLKDIVSNYSSLTGSDKWTLQSIMLLVFRPVLQDVRAMKKNMKRQDINDLREIWGTDGKVLEVLQQLVQVASHLSYAVRAPSHNDRELSQLDLLARDVVRNPPCPCGRT 167
BLAST of mRNA_H-canaliculatus_F_contig14859.3675.1 vs. uniprot
Match: D7G2D4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2D4_ECTSI) HSP 1 Score: 159 bits (402), Expect = 8.180e-44 Identity = 79/113 (69.91%), Postives = 99/113 (87.61%), Query Frame = 1
Query: 1 MDQKSTLLFPPGTVKLKNIVTNYASLTGSDKWTLQSIMLLIFRVVLQDCRAMKRNMKRRDINSLREIFGTDEEVLDVLRELIKVASHLSFAVRAPSLNDPELDNLDLMARDVV 339
M Q +LL+P GT +LK++V+NY+SLTGSDKWTLQSIMLL+FR V QD RAMK+NMKR++IN LREI+GTD +VL+VL++L++VASHLS+AVRAPS ND EL LDL+ARDVV
Sbjct: 375 MSQTPSLLYPAGTERLKDMVSNYSSLTGSDKWTLQSIMLLVFRPVFQDFRAMKKNMKRQNINDLREIWGTDGKVLEVLQQLVQVASHLSYAVRAPSHNDRELSQLDLLARDVV 487
BLAST of mRNA_H-canaliculatus_F_contig14859.3675.1 vs. uniprot
Match: A0A6H5KBT3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBT3_9PHAE) HSP 1 Score: 140 bits (352), Expect = 3.570e-40 Identity = 73/111 (65.77%), Postives = 88/111 (79.28%), Query Frame = 1
Query: 1 MDQKSTLLFPPGTVKLKNIVTNYASLTGSDKWTLQSIMLLIFRVVLQDCRAMKRNMKRRDINSLREIFGTDEEVLDVLRELIKVASHLSFAVRAPSLNDPELDNLDLMARD 333
M QK +LL+PPGT KLK++VTNYASL GSDKWTLQSI+LLIFR+VLQD AM+RNM R+I L +GT ++VL+ LREL+K AS LSFA+RAPS DPEL LD +A D
Sbjct: 14 MAQKPSLLYPPGTRKLKDVVTNYASLNGSDKWTLQSIILLIFRMVLQDVSAMRRNMMTREIKDLVTEWGTYDKVLEALRELMKRASLLSFALRAPSFTDPELRQLDKLAHD 124
BLAST of mRNA_H-canaliculatus_F_contig14859.3675.1 vs. uniprot
Match: A0A6H5KDY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDY2_9PHAE) HSP 1 Score: 144 bits (363), Expect = 4.600e-40 Identity = 75/111 (67.57%), Postives = 90/111 (81.08%), Query Frame = 1
Query: 1 MDQKSTLLFPPGTVKLKNIVTNYASLTGSDKWTLQSIMLLIFRVVLQDCRAMKRNMKRRDINSLREIFGTDEEVLDVLRELIKVASHLSFAVRAPSLNDPELDNLDLMARD 333
M QK +LL+PPGT KLK++VTNYASL GSDKWTLQSI+LLIFR+VLQD AM+RNMK R+I L +GT ++VL+ LREL+K AS LSFA+RAPS DPEL LD +ARD
Sbjct: 144 MAQKPSLLYPPGTRKLKDVVTNYASLNGSDKWTLQSIILLIFRMVLQDVSAMRRNMKTREIKDLVTEWGTYDKVLEALRELMKRASLLSFALRAPSFTDPELRQLDKLARD 254
BLAST of mRNA_H-canaliculatus_F_contig14859.3675.1 vs. uniprot
Match: A0A6H5JMI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMI6_9PHAE) HSP 1 Score: 148 bits (373), Expect = 1.500e-38 Identity = 77/111 (69.37%), Postives = 91/111 (81.98%), Query Frame = 1
Query: 1 MDQKSTLLFPPGTVKLKNIVTNYASLTGSDKWTLQSIMLLIFRVVLQDCRAMKRNMKRRDINSLREIFGTDEEVLDVLRELIKVASHLSFAVRAPSLNDPELDNLDLMARD 333
M QK +LL+PPGT KLK+IVTNYASLTGSDKWTLQSIMLL+FR+VLQD AM+RNMK R+IN L+ +GT E VL+ +REL+K AS LSFA RAPS +PEL LD +ARD
Sbjct: 162 MAQKPSLLYPPGTEKLKDIVTNYASLTGSDKWTLQSIMLLVFRMVLQDVPAMRRNMKTREINDLKAEWGTYENVLEAVRELLKRASLLSFARRAPSFTEPELLQLDKLARD 272 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14859.3675.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14859.3675.1 >prot_H-canaliculatus_F_contig14859.3675.1 ID=prot_H-canaliculatus_F_contig14859.3675.1|Name=mRNA_H-canaliculatus_F_contig14859.3675.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=144bp MDQKSTLLFPPGTVKLKNIVTNYASLTGSDKWTLQSIMLLIFRVVLQDCRback to top mRNA from alignment at H-canaliculatus_F_contig14859:1051..2493+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14859.3675.1 ID=mRNA_H-canaliculatus_F_contig14859.3675.1|Name=mRNA_H-canaliculatus_F_contig14859.3675.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1443bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14859:1051..2493+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14859:1051..2493+ >mRNA_H-canaliculatus_F_contig14859.3675.1 ID=mRNA_H-canaliculatus_F_contig14859.3675.1|Name=mRNA_H-canaliculatus_F_contig14859.3675.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=864bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14859:1051..2493+ (Hapterophycus canaliculatus Oshoro5f female)back to top |