mRNA_H-canaliculatus_F_contig14845.3669.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14845.3669.1 vs. uniprot
Match: D8LGM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGM5_ECTSI) HSP 1 Score: 286 bits (731), Expect = 1.810e-93 Identity = 166/226 (73.45%), Postives = 184/226 (81.42%), Query Frame = 1
Query: 1 RLHLPAVPRLARPGPAQAVAVAAXXXXXXXXARGLFSAAAAAAQGRHTTAVSEGNSGLFARVGARGVLAARLLGDAAAAVVASMMVSPFISIVDRAIIQSASGTMGMQASVAQGARVLMTKPALFLARPDFICTFCLYGATYLAANAISTMADEMSRSDTMPKFLGTTAINMPGSIAKDQALTKIFGVVGASAKVPAASFALFTVRDLATMAAAFSLPSPMSSKVR 678
RLH+P VPRL P + V A ARG +A +A G V GN L R+GARGVLAARL+ D AAA +AS+MVSPFISIVDRAIIQSASG+MGM+ASVAQG RVL TKPALFLARPDFICTFCLYGATYLAAN ISTMADE SRSDTMPKFLGTTAINMPGSIAKDQALTKIFGVVG++AKVPAASFALFTVRD+ATMAAAF+LP+PMS+K++
Sbjct: 33 RLHMPPVPRLQGPAVTRTVVAVAAAATGATAARGFLAARDGSAGG-----VGVGN--LLERLGARGVLAARLVSDFAAASMASLMVSPFISIVDRAIIQSASGSMGMKASVAQGFRVLATKPALFLARPDFICTFCLYGATYLAANTISTMADEFSRSDTMPKFLGTTAINMPGSIAKDQALTKIFGVVGSAAKVPAASFALFTVRDVATMAAAFTLPTPMSTKMQ 251
BLAST of mRNA_H-canaliculatus_F_contig14845.3669.1 vs. uniprot
Match: A0A6H5L555_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L555_9PHAE) HSP 1 Score: 271 bits (692), Expect = 1.140e-87 Identity = 160/223 (71.75%), Postives = 179/223 (80.27%), Query Frame = 1
Query: 10 LPAVPRLARPGPAQAVAVAAXXXXXXXXARGLFSAAAAAAQGRHTTAVSEGNSGLFARVGARGVLAARLLGDAAAAVVASMMVSPFISIVDRAIIQSASGTMGMQASVAQGARVLMTKPALFLARPDFICTFCLYGATYLAANAISTMADEMSRSDTMPKFLGTTAINMPGSIAKDQALTKIFGVVGASAKVPAASFALFTVRDLATMAAAFSLPSPMSSKVR 678
+P VPRL PG + XXXX ARG AA+ + R+GARGVLAARL+ D AAA +AS+MVSPFISIVDRAIIQSASG+MGM+ASVAQG RVL TKPALFLARPDFICTFCLYGATYLAAN ISTMADE SRSDTMPKFLGTTAINMPGSIAKDQALTKIFGVVG++AKVPAASFALFTVRD+ATMAAAF+LP+PMS++++
Sbjct: 1 MPPVPRLEGPGATRTAVAVXXXXXGATAARGFL-----AARDGSXXXXXXXXGNILERLGARGVLAARLVSDFAAASMASLMVSPFISIVDRAIIQSASGSMGMKASVAQGFRVLATKPALFLARPDFICTFCLYGATYLAANTISTMADEYSRSDTMPKFLGTTAINMPGSIAKDQALTKIFGVVGSAAKVPAASFALFTVRDVATMAAAFTLPTPMSARMQ 218
BLAST of mRNA_H-canaliculatus_F_contig14845.3669.1 vs. uniprot
Match: A0A835Z5G8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G8_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.560e-33 Identity = 71/154 (46.10%), Postives = 104/154 (67.53%), Query Frame = 1
Query: 223 DAAAAVVASMMVSPFISIVDRAIIQSASGTMGMQASVAQGARVLMTKPALFLARPDFICTFCLYGATYLAANAISTMADEMSRSDTMPKFLGTTAINMPGSIAKDQALTKIFGVVGASAKVPAASFALFTVRDLATMAAAFSLPSPMSSKVRAR 684
D +A AS MVSPFI+IVDR+IIQ+ASG M M S+ G + L+ +P +FL RP+F+ F +Y ATY ANA++T + P+FL T+A+NM IAKD+A T++FG A +P +++ALFT+RD T+ A+F+LP P+S ++A+
Sbjct: 40 DVLSAFGASFMVSPFITIVDRSIIQNASGVMQMGDSIRAGIKELVMRPHVFLRRPEFLMIFGVYSATYTTANAVNTTCEHRKVDSAWPRFLSTSAVNMTSCIAKDRAFTRMFGS-SAPMALPLSTYALFTIRDAGTVGASFNLPGPVSEWLQAQ 192
BLAST of mRNA_H-canaliculatus_F_contig14845.3669.1 vs. uniprot
Match: A0A2D4BK36_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK36_PYTIN) HSP 1 Score: 130 bits (326), Expect = 2.890e-33 Identity = 80/163 (49.08%), Postives = 110/163 (67.48%), Query Frame = 1
Query: 199 VLAARLLG-DAAAAVVASMMVSPFISIVDRAIIQSASGTMGMQASVAQGARVLMTKPALFLARPDFICTFCLYGATYLAANAISTMADEMSRSDTMPKFLGTTAINMPGSIAKDQALTKIFGVVGASAKVPAASFALFTVRDLATMAAAFSLPSPMSSKVRAR 684
VLAA+ LG DAAAA++AS+ VSPFI+IVDR+II++ASG + + + + + P FL R +F F LY ATY +ANAI T+ D + MPKF+GTTA+NM IAKD+A T++FGV+ A A P AS LF VRD T+AA+F+ P ++ ++R R
Sbjct: 15 VLAAKRLGVDAAAAMIASLGVSPFITIVDRSIIENASGARQLTTGLKELSIDFLRHPLQFLRRREFRLVFGLYTATYASANAIDTLCDVTDTNSQMPKFVGTTAVNMTLCIAKDRAFTQMFGVI-APAAFPLASIGLFAVRDALTVAASFNAPRVVAKELRER 176
BLAST of mRNA_H-canaliculatus_F_contig14845.3669.1 vs. uniprot
Match: A0A662XCZ4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCZ4_9STRA) HSP 1 Score: 127 bits (319), Expect = 3.000e-32 Identity = 81/177 (45.76%), Postives = 113/177 (63.84%), Query Frame = 1
Query: 145 TAVSEGNSGLFARVGARGVLAARLLGDAAAAVVASMMVSPFISIVDRAIIQSASGTMGMQASVAQGARVLMTKPALFLARPDFICTFCLYGATYLAANAISTMADEMSRSDTMPKFLGTTAINMPGSIAKDQALTKIFGVVGASAKVPAASFALFTVRDLATMAAAFSLPSPMSSKV 675
T+ SEG+ G A LA RL D AAA+ AS+ V+PFI+IVDRAII++ASG + + Q A + P F+ + +F+ F LY ATY++ANAI TM + + + MPKF+GTTA+NM IAKD+A ++FGV+ A A P AS LF VRD T+AA+F+ P ++ K+
Sbjct: 4 TSSSEGSRGASA-------LAKRLGIDLAAAMAASVSVAPFITIVDRAIIENASGARPLGVGLKQLAADFVRHPLRFVVKREFLLIFGLYSATYVSANAIDTMCEFAEKDNQMPKFIGTTAVNMSLCIAKDRAFARMFGVI-APAAFPLASIGLFAVRDSLTVAASFNAPKFLAKKL 172
BLAST of mRNA_H-canaliculatus_F_contig14845.3669.1 vs. uniprot
Match: A0A8K1CT18_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CT18_PYTOL) HSP 1 Score: 124 bits (310), Expect = 6.600e-31 Identity = 75/158 (47.47%), Postives = 102/158 (64.56%), Query Frame = 1
Query: 211 RLLGDAAAAVVASMMVSPFISIVDRAIIQSASGTMGMQASVAQGARVLMTKPALFLARPDFICTFCLYGATYLAANAISTMADEMSRSDTMPKFLGTTAINMPGSIAKDQALTKIFGVVGASAKVPAASFALFTVRDLATMAAAFSLPSPMSSKVRAR 684
RL D AAA AS+ VSPFI+IVDRAII++ASG + V Q + + P FL R +F F LY ATY +AN+I T+ D + MPKF+GTTA+NM IAKD+A T++FGV+ A A P AS LF +RD T+AA+F+ P M+ +++ +
Sbjct: 19 RLGVDVAAAATASLGVSPFIAIVDRAIIENASGARRLSDGVKQLSMEFLRHPLRFLHRREFRLVFGLYTATYASANSIETLCDATDTDNQMPKFVGTTAVNMTLCIAKDRAFTQMFGVI-APAAFPLASVGLFAIRDSMTVAASFNAPKIMAQQLQEK 175
BLAST of mRNA_H-canaliculatus_F_contig14845.3669.1 vs. uniprot
Match: A0A2D4BMX9_PYTIN (NUP50 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMX9_PYTIN) HSP 1 Score: 127 bits (319), Expect = 5.750e-30 Identity = 79/163 (48.47%), Postives = 108/163 (66.26%), Query Frame = 1
Query: 199 VLAARLLG-DAAAAVVASMMVSPFISIVDRAIIQSASGTMGMQASVAQGARVLMTKPALFLARPDFICTFCLYGATYLAANAISTMADEMSRSDTMPKFLGTTAINMPGSIAKDQALTKIFGVVGASAKVPAASFALFTVRDLATMAAAFSLPSPMSSKVRAR 684
VL A+ LG DAAAA++AS+ VSPFI+IVDR+II++ASG + + + + + P FL R +F F LY ATY ANAI T+ D + MPKF+GTTA+NM IAKD+A T++FGV+ A A P AS LF VRD T+AA+F+ P ++ ++R R
Sbjct: 565 VLEAKRLGVDAAAAMIASLGVSPFITIVDRSIIENASGARQLTTGLKELSIDFLRHPLQFLRRREFRLVFGLYTATYARANAIDTLCDVTDTNSQMPKFVGTTAVNMTLCIAKDRAFTQMFGVI-APAAFPLASIGLFAVRDALTVAASFNAPRVVAKELRER 726
BLAST of mRNA_H-canaliculatus_F_contig14845.3669.1 vs. uniprot
Match: A0A3M6VQY3_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQY3_9STRA) HSP 1 Score: 121 bits (303), Expect = 7.140e-30 Identity = 70/164 (42.68%), Postives = 105/164 (64.02%), Query Frame = 1
Query: 202 LAARLLGDAAAAVVASMMVSPFISIVDRAIIQSASGTMGMQASVAQGARVLMTKPALFLARPDFICTFCLYGATYLAANAISTMADEMSRSDTMPKFLGTTAINMPGSIAKDQALTKIFGVVGASAKVPAASFALFTVRDLATMAAAFSLPSPMSSKVRARPVM 693
L +L+ D AAA+ AS+ V+PFI+IVDRAII++ASG + + + + + P F+ + +F F LY ATY+AANA+ ++ + + + MPKF+GTTA+NM IAKD+A ++FGV+ A A P AS LF VRD T AA+F+ P ++ K+ +M
Sbjct: 17 LVKQLMVDTAAAMAASLGVAPFITIVDRAIIENASGARPLGRGIKELSISFLKNPLRFVGKREFHIVFGLYTATYMAANAVDSVCEYIETDNQMPKFIGTTAVNMSLCIAKDRAFARMFGVI-APAAFPLASIGLFAVRDSMTCAASFNAPKVLAKKIEDNKLM 179
BLAST of mRNA_H-canaliculatus_F_contig14845.3669.1 vs. uniprot
Match: A0A5D6XW10_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW10_9STRA) HSP 1 Score: 120 bits (302), Expect = 1.120e-29 Identity = 72/161 (44.72%), Postives = 98/161 (60.87%), Query Frame = 1
Query: 196 GVLAARLLGDAAAAVVASMMVSPFISIVDRAIIQSASGTMGMQASVAQGARVLMTKPALFLARPDFICTFCLYGATYLAANAISTMADEMSRSDTMPKFLGTTAINMPGSIAKDQALTKIFGVVGASAKVPAASFALFTVRDLATMAAAFSLPSPMSSKVR 678
G+L RL D AA AS V+PFI+IVDRAII++ASG + + + AR +P F+ +F F LY ATY +ANA ++ D R MPKF TTA+NM IAKD+A ++FGVV SA P A+ LF VRD T+AA+F+ P ++ K++
Sbjct: 18 GLLTRRLAADVTAAATASFAVAPFITIVDRAIIENASGARPLGVGIRELARAFARRPLAFVRTREFAIVFGLYTATYASANATDSLCDFAERDSQMPKFAATTAVNMSLCIAKDRAFAQMFGVVAPSA-FPLAAVGLFAVRDSLTVAASFNAPKAVARKLQ 177
BLAST of mRNA_H-canaliculatus_F_contig14845.3669.1 vs. uniprot
Match: K3WSU5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU5_GLOUD) HSP 1 Score: 119 bits (299), Expect = 2.780e-29 Identity = 70/159 (44.03%), Postives = 100/159 (62.89%), Query Frame = 1
Query: 199 VLAARLLGDAAAAVVASMMVSPFISIVDRAIIQSASGTMGMQASVAQGARVLMTKPALFLARPDFICTFCLYGATYLAANAISTMADEMSRSDTMPKFLGTTAINMPGSIAKDQALTKIFGVVGASAKVPAASFALFTVRDLATMAAAFSLPSPMSSKV 675
V+A L D AAA AS VSPFI+IVDRAII++ASG + + + ++ + P F+ + +FI F LY +TY +ANAI T+ + + MPKFLGTTA+NM IAKD+A ++FGVV SA P + LF +RD T+ A+F+ P ++ K+
Sbjct: 16 VVAKNLAIDLAAAAAASFAVSPFITIVDRAIIENASGARPLAVGIKELSKAFVANPFQFVRKREFIIVFGLYTSTYASANAIDTVCEWAEADNQMPKFLGTTAVNMTLCIAKDRAFAQMFGVVAPSA-FPIGAIGLFAIRDSLTVGASFNAPKTVAKKL 173 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14845.3669.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14845.3669.1 >prot_H-canaliculatus_F_contig14845.3669.1 ID=prot_H-canaliculatus_F_contig14845.3669.1|Name=mRNA_H-canaliculatus_F_contig14845.3669.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=234bp RLHLPAVPRLARPGPAQAVAVAAVAAAGATAARGLFSAAAAAAQGRHTTAback to top mRNA from alignment at H-canaliculatus_F_contig14845:243..1412- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14845.3669.1 ID=mRNA_H-canaliculatus_F_contig14845.3669.1|Name=mRNA_H-canaliculatus_F_contig14845.3669.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1170bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14845:243..1412- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14845:243..1412- >mRNA_H-canaliculatus_F_contig14845.3669.1 ID=mRNA_H-canaliculatus_F_contig14845.3669.1|Name=mRNA_H-canaliculatus_F_contig14845.3669.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1404bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14845:243..1412- (Hapterophycus canaliculatus Oshoro5f female)back to top |