mRNA_H-canaliculatus_F_contig1483.3656.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1483.3656.1 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI) HSP 1 Score: 1108 bits (2866), Expect = 0.000e+0 Identity = 581/942 (61.68%), Postives = 687/942 (72.93%), Query Frame = 1
Query: 67 EIPPEVLELIRANQLPSDWNGNRWSRPPLSVLSSGWESALGWWNDVKQFGEGKSNKL--MLVGLENAGKSIIVRNLTGGSAPGRADRTVGIEITPEWKPLEEARLQISVWDFAGQADYYVSHQLFLTEGALFLLVVDLRKFSTEIESDADNFTDTGRCVYWWLDMLHMRVPGAAIALVGSHVDQMTSEEADRAGIDLHT---------------VATNFIQEKASNVPRTQSIRCIDAESTTTSEVDHARECVHFAQPSGSSESAAKPLILHDDVFKVSHDRGSVLELRRWITRAASGRECPPEFNFPAVDQIVPKAWVTAYDVMGTLVATKPYVLWSGAVEEFRKKMGAA*LVADDDAWQVLLRAMKHREAEGGVLLSLEDASAPVATDMLHLNPSWLIELVRRLSDHNLVSEDKRRRGTAYQGLRSYAKKVEGVTIADLVDMHSLYCKSGRLNRDFLRFLWMHRKIGATDSPIHLTDAEFETIVSTMARLLVMYISRDADILVVPARLEEYGDHRIVDRMQDVVLTIECSFGLVFPPPGIVGRFIAWSAEQVGDCDACWQHGAFFNYKFQHAQYKVFVYEKPVEELHEDGTKCKFAGLVLGIQGLPVMAAEVLHNLKESLKTLVSDPVLGYPGIAGKGTMYFAPPKTTESKFLDDLRSTLD---------------------NINERLGRIDGTVSQLLEQDLLAASVEPSEYPHRVLVRPELEDEDGEPPELIQHAGWDRWTKALTDIGSHKFRLHFLCEHDSSVVPCGPEGRGYLIEQPKEWVKKWLPLIQGSLWVLRVAVGAVSHVDLPLDEVLSAFAKATSAELMASASNVTESIGNAAIPEFGEGATQDEIDRFIHLRGTAYKALCDFMSGVESHT--CLPRCLPRHRT-RVVDWRENMDRVQNPRTGRWVWVLRGNKDAYVRKHGGILPTTSAP 2769
EIPPEVLEL R W+ N WSRPP +VL SG+E ALGWW DVK+FGEGKSNKL +LVGL AGK+ IVR++TG S P R+DRTVGIEIT +WKP +E LQ+SVWDFAGQADYY SHQLFLT+GALFLLVVDL FS EI S DNFTD R +YWWL+MLHMRVPGAA+ALVGSHVDQM SE+A +A LHT V + FI++KA N R QSIRCIDAEST EVDH R+ A SGSS A+PL+LH +VFKVS SV+ELR+WI +AASGRECP FNFPAVDQ V KAW+ AYD M L T P VLWS AVEEFR+KM VA D A +VLLRAM+HREAEGGVLLSL D SAPVA+DMLHL+PSWLIELVRRL+DHNLV +DK++RG+ QGLR YAK+ +G+ A L D+H++YC+SGRLNR +LRFLWMHRKI + LTD EFE+IVSTM RLLVMY +RDAD LVVPARL+EYGD RI DR+ ++VL IECSFG V+PPPGIVGRF+AWSA+QV D CWQHGAFF+YK+Q+A+Y VF+YE VEE H+DGT FAGL LGIQG P AAEVL L++SL++LVSD GYPG+ G MYF P + ES L L S LD ++ E + ++ G V+QLLEQDLL AS E S YP VLVRPELE + E IQ AGWDRWTKAL+++G HKFR+HFLC HD S VPCGP GRG+ I+ PK+WVK+WLPL+Q SLW+LRVAVGAVS+VDLPL++VL AF AT AEL+ V + I +AA+P F EGAT+ E+D F LRG +Y+ LC FM VES CL CLP HRT VVDWR++M +V+NP TGR WVL+ N+ A++R+HGG T AP
Sbjct: 227 EIPPEVLELCREILGEPSWHANPWSRPPSTVLESGFERALGWWEDVKRFGEGKSNKLKMVLVGLAGAGKTTIVRHMTGRSVPKRSDRTVGIEITTDWKPGDEVPLQVSVWDFAGQADYYSSHQLFLTKGALFLLVVDLHAFSKEIGSGVDNFTDPRRRIYWWLEMLHMRVPGAAVALVGSHVDQMESEDARQAETHLHTGEASWFFRGRVPCSLVVSKFIKDKAGNASRRQSIRCIDAESTKPMEVDHLRDDGRMAPRSGSSRFTAEPLVLHGNVFKVSLAPTSVVELRQWIVKAASGRECPTGFNFPAVDQTVSKAWIEAYDAMDVLKGTAPCVLWSRAVEEFRRKMSGIPPVAGD-AGKVLLRAMQHREAEGGVLLSLADDSAPVASDMLHLDPSWLIELVRRLADHNLVDKDKKKRGSLEQGLRVYAKR-QGLAAAPLFDIHNVYCRSGRLNRAYLRFLWMHRKIEGPGPTVDLTDPEFESIVSTMERLLVMYTARDADNLVVPARLQEYGDQRIPDRLTNMVLKIECSFGQVYPPPGIVGRFLAWSAQQVADYGECWQHGAFFSYKYQYARYDVFLYESEVEEAHQDGTVDMFAGLTLGIQGPPPQAAEVLEELRKSLESLVSDSAYGYPGLVGP--MYFRPAEEIESSLLVRLGSVLDXXXXXXXXXXXXXXXXXXXXXSLEETVRKLGGIVTQLLEQDLLPASDEQSAYPRLVLVRPELETAEDMTHERIQRAGWDRWTKALSEMGFHKFRVHFLCGHDLSEVPCGPGGRGFPIKHPKDWVKQWLPLMQVSLWMLRVAVGAVSNVDLPLNKVLGAFVMATGAELLEGVGKVPDRISSAALPVFSEGATRAEMDGFKDLRGKSYEGLCKFMRDVESSPPQCLSGCLPCHRTLAVVDWRDHMVQVRNPSTGRRAWVLKTNEKAFLREHGGAPATAGAP 1164
BLAST of mRNA_H-canaliculatus_F_contig1483.3656.1 vs. uniprot
Match: D8LK68_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK68_ECTSI) HSP 1 Score: 333 bits (855), Expect = 8.070e-93 Identity = 242/679 (35.64%), Postives = 344/679 (50.66%), Query Frame = 1
Query: 817 PLILHDDVFKVSHDRGSVL-ELRRWITRAASGRECPPEFNFPAVDQIVPKAWVTAYDVMGTLVATK--PYVLWSGAVEEFRK----------KMGAA*LVADDDAWQVLLRAMKHREAEGGVLLSLEDASAPVATDMLHLNPSWLIELVRRLSDHNLVSEDKRRRGTAYQGLRSYAKKVEGVTIA--DLVDMHSLYCKSGRLNRDFLRFLWMHRKIGATD--SPIHLTDAEFETIVSTMARLLVMY-----ISRDADILVVPARLEEYGDHRIVDR---MQDVVLTIECSFGLVFPPPGIVGRFIAWSAEQVGDCDACWQHGAFFNYKFQHAQYKVFVYEKPVEELHEDGTKCKFAGLVLGIQGLPVMAAEVLHNLKESLKTLVSDPVLGYPGIAGKGTMYFAPPKTTESK-----FLDDLRSTLDNINERLGRIDGTVSQLLEQDLLAASVEPSE--YPHRVLVRP-------ELEDEDGEPPELIQHAGWDRWTKALTDIGSHKFRLHFLCEHDSSVVPCGPEGRGYLIEQPKEWVKKWLPLIQGSLWVLRVAVGAVSHVDLPLDEVLSAFAKATSAELMASASNVTESIGNAAIPEFGEGATQDEIDR--FIHLRGTAYKALCDFMS----GVESHTCLPRCLPRHRTRV-------VDWRENMDRVQNPRTGRWV 2697
PLILH VF S + + L WI A + F+FPAV I+P AWV A + L K PYVLW AV F++ K ++D+DA L AMKHREAEGGV+LSL D S+P +DM+H++P WLIELVRR++DHNLV DK+++ Q L Y + +L + H+ + + GRLNRD+LRFLW+HRK+ + L F+++V TM + L +Y S D +VPARL E+G+ I++ + +VV+ F P GI+GRF+A+++ + CWQHGA +K ++ V + E +E+ G + F + + ++G A VL + E L +L+ D + GYPG+ F T+S F L + L I E R S + + + +P E YP VL++P E + E+ + WDRW GS F L FLCE D S +PCGP+G+G+ + P PL+QG+LW++++AVG V+ VDLPL +VL AF AT+AE++ AA +F AT DE + F L G AYKALCDFM+ G E C CLP +R RV DWR +M+ ++N WV
Sbjct: 1470 PLILHPRVFCASLGLDNRIGRLSDWIIGVAPEKI---SFSFPAVATILPAAWVDAIAAVEALHKEKGTPYVLWGDAVRAFQRYFQEKHKEEGKEERNKPLSDEDAATNLKEAMKHREAEGGVILSLRDESSPAQSDMIHVDPRWLIELVRRVTDHNLV--DKKKQNKILQELLEYDRTRPDTLSGYKNLCETHACFIRQGRLNRDYLRFLWVHRKLEVEGDYAGAQLDKDAFDSMVDTMIKYLFIYPSHGECSNAEDCHIVPARLPEHGNDNILEESIGLGEVVVGKTAWFLRSHAPTGIIGRFLAFTSSRFEASGKCWQHGAHIQWKKDSNEHDVLLCETTIEKDIIPG-QSTFPAIAICVKGKTAEAKGVLREVGEQLLSLLQDNIHGYPGLR---LPIFEELNITQSDQFQVHFERYLATQLAKILEDTRR----ESVRMFRAAFPSYGDPVELPYPRLVLLKPVETTSIQETQAEESVNGAIQLRRTWDRWIDLCRSGGSCDFVLVFLCERDFSEIPCGPQGKGFRVHNPGSLFNTLKPLLQGALWLVKIAVGTVASVDLPLHDVLEAFLHATAAEVL-----------EAAPSQFSPSATLDEGQQEGFKELHGPAYKALCDFMTKEEFGPEEARC-ESCLPWYRPRVHEPIPSEFDWRSHMEMIKNGIGYSWV 2123
BLAST of mRNA_H-canaliculatus_F_contig1483.3656.1 vs. uniprot
Match: A0A6H5JR01_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR01_9PHAE) HSP 1 Score: 291 bits (744), Expect = 4.310e-83 Identity = 219/672 (32.59%), Postives = 325/672 (48.36%), Query Frame = 1
Query: 817 PLILHDDVFKVSHDRGS-VLELRRWITRAASGRECPPEFNFPAVDQIVPKAWVTAYDVMGTLVATKPYVLWSGAVEEFRKKMGAA*L----------VADDDAWQVLLRAMKHREAEGGVLLSLEDASAPVATDMLHLNPSWLIELVRRLSDHNLVSEDKRRRGTAYQGLRSYAKKVEGVTIA--DLVDMHSLYCKSGRLNRDFLRFLWMHRKIGATD--SPIHLTDAEFETIVSTMARLLVMY-----ISRDADILVVPARLEEYGDHRIVDR---MQDVVLTIECSFGLVFPPPGIVGRFIAWSAEQVGDCDACWQHGAFFNYKFQHAQYKVFVYEKPVEE--LHEDGTKCKFAGLVLGIQGLPVMAAEVLHNLKESLKTLVSDPVLGYPGIAGKGTMYFAPPKTTESKFLDDLRSTLDNINERLGRIDGTVSQLLEQDLLAASVEPSEYPHRVLVRPELEDEDGEPPELIQHAG-------WDRWTKALTDIGSHKFRLHFLCEHDSSVVPCGPEGRGYLIEQPKEWVKKWLPLIQGSLWVLRVAVGAVSHVDLPLDEVLSAFAKATSAELMASASNVTESIGNAAIPEFGEGATQDEIDR--FIHLRGTAYKALCDFMS----GVESHTCLPRCLPRHRTRV-------VDWRENMDRVQNPRTGRWV 2697
PLILH VF+ S + V L WI ++ + F+FPAV I+P AWV LW AV+ F++ ++D++A L AMKHREAEGGV+LSL + S+P +DM+H++P WLI+LVRR++DHNLV DK+ + L Y + +L + H+ + + GRLNR +LRFLW+HRK+ + + L + F+++V TM + L +Y S+ +VPARL E G +++ + +VV+ F P GI+G F+A+++ + CWQHGA +K ++ + + E +E+ + GT + + ++G A VL + E L +L+ D + + Y A T L+D R + G +LL YP VL++P +E + ++ +G WDRW GS F L LCE D S +PCGP+G+G+ + P PL+QG+LW++++AVG V+ V LPL +VL AF AT+AE++ AA +F AT DE + F L G AYKALCDFM G E C P CLP HR RV DWR +M +++N WV
Sbjct: 42 PLILHPRVFRASLGLDNRVNRLSDWIIDVSTEKI---SFSFPAVATILPSAWV----------------LWGDAVKAFQRYFQEKHKEEREDERNKPLSDEEASSNLKEAMKHREAEGGVILSLREESSPAQSDMIHVDPRWLIDLVRRVTDHNLV--DKKNEHEILKELLEYGRTRPDTLSGYKNLCETHTCFIRQGRLNRKYLRFLWVHRKLEVEGGYAGVQLENDTFDSMVDTMIKYLFIYPSHGECSKAEGFYIVPARLPEIGKDNVLEESIGLDEVVVGKTAWFLRSHAPTGIIGCFLAFTSSRFEASGECWQHGAHIQWKKDSNEHDMLLCETTIEKDIIPGPGT---LPAIAICVKGKTAEAKGVLREVGEQLLSLLKDVIHVH------FERYLATKLAT---ILEDTRRESVRMFRAAFPSYGEHVELL-------------YPRLVLLKP-VETTSIQETQVESVSGAKKLRRTWDRWIDLCWSGGSCDFVLVILCERDFSEIPCGPQGKGFRVHNPGSLFNTLKPLLQGALWLVKIAVGTVASVYLPLHDVLEAFLHATAAEVL-----------EAAPSQFSPSATLDEGQQEGFKELHGPAYKALCDFMRKEEFGPEEAQCCP-CLPWHRPRVHEPILSEFDWRSHMYKIKNGVGYSWV 654
BLAST of mRNA_H-canaliculatus_F_contig1483.3656.1 vs. uniprot
Match: A0A6H5JSN1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN1_9PHAE) HSP 1 Score: 241 bits (615), Expect = 3.420e-63 Identity = 239/925 (25.84%), Postives = 398/925 (43.03%), Query Frame = 1
Query: 130 NRWSRPPLSVLSSGWESALGWWNDVKQFGEGKSNKL--MLVGLENAGKSIIVRNLTGGSA----PGRADRTVGIEITP--------EWKPLEEARLQISVWDFAGQADYYVSHQLFLTEGALFLLVVDLRKFSTEIESDADNFTDTGRCVYWWLDMLHMRVPGAAIALVGSHVDQMTSEEADRAGIDLHTVATNFIQEKASNVPRTQSIRCIDAESTTTSEVDHARECVHFAQPSGSSESAAKPLILHDDVFKVSHDRG-SVLELRRWITRAASGRECPPEFNFPAVDQIVPKAWVTAYDVM-------------------------GTLVAT-KPYVLWSGAVEEFRKKMGAA*LVADD--DAWQVLLRAMKHREAEGGVLLSLEDASAPVATDM-------LHLNPSWLIELVRRLSDHNLVSEDKRRRGTAYQGLRSYAKKVEGVTIADLVDMHSLYCKSGRLNRDFLRFLWMHRKIGA------TDSPIHLTDAEFETIVSTMARLLVMY-ISRDADILVVPARLEEYGDHRIVDRMQDVVLTIECSFGLVFP-----------PPGIVGRFIAWSAEQVGDCDACWQHGAFFNYKFQHAQYKVFVYEKPVEELHEDGTKCKFAGLVLGIQGLPVMAAEVLHNLKESLKTLVSDPVLGYPGIA-----GKGTMYFAPPKTTE---SKFLDDLRSTL----DNINERLGRIDGTVSQLLEQ----------------DLLAA--------SVEPSEYPHRVLVRPELEDEDGEPPELIQHAGWDRWTKALTDIGS--HKFRLHFLCEHDSSVVPCGPEGRGYLIE--QPKEWVKKWLPLIQGSLWVLRVAVGAVSHVD-LPLDEVLSAFAKATSAELMASASNVTESIGNAAIPEFGEGATQDEIDRFIHLRGTAYKALCDF 2577
N W+ PP VL G A + D++ FG SN+L +LVGL NAGK+ + L G + P +RTVG+EI + A L + +WDFAGQ YY +HQ+FLT GALF+LVVD+ +S + S D WLD+L RVPG+ + L+G+H D S +D F++ + + + ++ I E ++ HA Q + E ++ +S G + ELR I A G ++FP+V+ VP+ + A + GT V P+VL+ A+ F + G + + +V L A+K E +G +LL+ D + DM +H+NP+W +L+RR+ D L+ + R+ + + K+ ++ DL H + +G LNR ++RFLW R + T P+ +++ + TIV ++ + M+ + ++ D +VP+ L DH D ++ +E G +F PPG++ R +AW + ACW+ G F++K ++ V +YE H D + +G A L ++ L LV D G+PG+ G + +T E ++F +L+ + + + ++L I G V + L + D +AA S E + P L+ +D + H + + G +R+ FLC +D S CG +G GY +E K W++K++P+IQ +LW +RV V VS D LP+D+V+ + E + + G+ ++ G+ Q E+DR + G+A+ L D+
Sbjct: 13 NPWTEPPADVLQVGLAYAASFLKDLEDFGRTSSNRLKVVLVGLGNAGKTSVAVRLEGLAPSKPLPSAKERTVGVEIRDIRLGSGPANARSGGNAELDVKLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFAYSEDGHSREDALEQ-------WLDILQARVPGSVVLLMGTHSDSFDSPAECSKRVDC------FVKGELLPLYKNFIMKRIGDECKAAADRGHAG-----VQDNRRYEPLRVVVVKELLALNLSPSGGVTTAELREHIEGVAYGVH--DGYSFPSVNNEVPEPHLLAVATLEAVRRGVSLRGSGGEPAEVARRLNAGTKVGEGHPFVLFPEALSRFLEVAGEKPMFGGKATEGARVFLAAIKLHEVQGAILLTRADGGGEME-DMASEEHLVIHMNPAWFADLIRRIVDVRLLDPAQARQ----EKVADLIKRQPPASVGDLSKQHHRFFLAGELNRRYMRFLWKDRDLELGPASPNTAPPLEMSEEDITTIVESLLDVRFMFRVRQNEDHYIVPSCLP---DHVGCDMDPKKLMELEVG-GAIFSRRLEFVGAHSVPPGLIPRLLAWCGQGDERITACWKRGVCFSFK----EHLVLLYE------HRDAGRAVIECHAMG-SAHDEKAWRTLEDVVTELGQLVGDAKYGFPGVGLFFVGGGDKQKVSSAETLEGLLTRFTGELKEQINVKVEELGQKLDDIAGGVEKHLRKGQEEMASLREDVSLQLDCIAAVTSECLLVSAE-KDIPCPRLIMVSEDDVPESDQSRLSHFRREMMDQLFLGKGQTPQHYRIRFLCAYDLSAATCGEDGLGYKVEIGSWKGWLQKYMPVIQVALWTVRVGVSVVSRADILPVDDVMGKLREVAGEEAATMIGEI-DVRGHCSLS--GQDLVQ-EVDRKAEVFGSAFNKLADW 892
BLAST of mRNA_H-canaliculatus_F_contig1483.3656.1 vs. uniprot
Match: A0A6H5K9A9_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A9_9PHAE) HSP 1 Score: 218 bits (556), Expect = 2.100e-55 Identity = 227/894 (25.39%), Postives = 377/894 (42.17%), Query Frame = 1
Query: 73 PPEVLELIRANQLPSDWNGNRWSRPPLSVLSSGWESALGWWNDVKQFGEGKSNKL--MLVGLENAGKSIIVRNLT---GGSAPGRADRTVGIEI---------TPEWKPLEEARLQISVWDFAGQADYYVSHQLFLTEGALFLLVVDLRKFSTEIESDADNFTDTGRCVYWWLDMLHMRVPGAAIALVGSHVDQMTSEEADRAGIDLHTVATNFIQEKASNVPRTQSIRCIDAESTTTSEVDHARECVHFAQPSGSSESAAKPLILHDDVFKV---SHDRGSVLELRRWITRAA-SGRECPPEFNFPAVDQIVPKAWVTAYDVMGTLVATK----------------------------PYVLWSGAVEEFRKKMGAA*LVA----------------------------DDDAWQVLLRAMKHREAEGGVLLSLED--------------ASAPVATDMLHLNPSWLIELVRRLSDHNLVSEDKRRRGTAYQGLRSYAKKVEGVTIADLVDMHSLYCKSGRLNRDFLRFLWMH-RKIGATDS---PIHLTDAEFETIVSTMARLLVMYISRDADILVVPARL-----------EEYGDHRIVD-RMQDVVLTIECSF-GLVFPPPGIVGRFIAWSAEQVGDCDACWQHGAFFNYKFQHAQYKVFVYEKPVEELHEDGTKCKFAGLVLGIQGLPVMAAEVLHNLKESLKTLVSDPVLGYPG---IAGKGTMYFAPPKTTESKFLDDLRSTL-DNINERLGRIDGTVSQLLEQDLLAASVEPSEYPHRVLVRPELEDEDGEPPELIQHAGWDRWTKALTD-----------IGSHKFRLHFLCEHDSSVVPCGPEGRGYLIEQPKEWVKKWLPLIQGSLWVLRVAVGAVSHVDLP 2394
P V E A+ + D + N W PP V+ G A + D+ +G SN+L +LVGL AGK+ I L GG P +RTVG+EI T E L +S+WDFAGQ YY +HQ+FLT+GALF+LVVD+ ++ E S D V WLD+L RVPGA + LVG+H D + T T+ ++ + + S +C A++ +E+ + G+ ++L +D+ + S D + L+R + A +G + ++F +V +VP+ ++ V+ TL A + +V +S AV RK+ + L DD+ ++ L A+K EA G +LL+ D A+A A ++H+NPS +LVRR+ D LV D R++ Q + + V + + L D H + K+G +++D+L+FLW+ ++G P+ +++A+ + +V ++ + MY RD VP R E ++++ + V + + G PPG+V R +AW G ACW+ G F +K + V +YE + +C G + A L+++ + + L++D G+PG I G+ + + + L D +N + + + ++QDL P V V P E G P + +D+W+ L + + + K RL FLC +D S+ CGP G+GY + + W KK +PL + L + A + + +P
Sbjct: 7 PRLVAEEFAASSVTVDTDNNPWKEPPADVMKRGMAYAAVFLRDLDDYGRAWSNRLKVVLVGLGGAGKTSIATRLEDRLGGCCPNPEERTVGVEIRNIKLGPGATSEGSG-PNVELDVSLWDFAGQRAYYDTHQMFLTQGALFVLVVDMFAYA-EGHSPED-------AVEQWLDILQARVPGAVLLLVGTHTDLFEDNATEC------TKRTDRFKKDVEKIMKRISCQCDSAKNLAETELGERHPDLE-----GNPHYRPLRVVLEEDLLTLDLTSSDWEDIGLLQRRLEHLAYNGYD---GYSFSSVRSVVPEPYLP---VIATLEAVRLGADLRGSGGTREAVVQRLREGDPRKRRSFVRFSEAVSLHRKQQEESTLSRVSNLAASLLFPXXXXXXXXXXXXXLFGRDDELRRIFLAAIKSHEAYGAILLTEVDGGGCPQEQRNVGIGAAASAADLIIHVNPSRFADLVRRVVDVRLV--DPRQQVKVEQAMAA-CPSVRPMLLT-LTDQHKRFVKAGEVSKDYLKFLWLRDMELGQASPEAPPLEMSEADVDVMVGSLLDVRFMYRVRDGHDAFVPDRYVVASCLPNKAGPEVDPGKMLELKAGSAVYSQKLKLVGAHAVPPGLVPRLLAWCGRGEGHIKACWKRGVCFAFK----NHMVLLYEVR-DTAGNSWIECHARGSMFDES-----ARTALNDIGDQVNELINDRKYGFPGLGLIRGESEEALVSSDGDHEALVKRIVNMLRDQMNVKF-----MMDRSIKQDLAFLRWP---IPRLVCVLPA--PESGAKPLEEKDRSFDKWSATLRNWCLGGKRKGKGVATRKLRLFFLCPYDRSLAECGPGGQGYEVTELLTWAKKAIPLAKVGLALASTAFKVCTGLSIP 850
BLAST of mRNA_H-canaliculatus_F_contig1483.3656.1 vs. uniprot
Match: A0A6H5JPJ1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ1_9PHAE) HSP 1 Score: 216 bits (549), Expect = 4.000e-54 Identity = 243/968 (25.10%), Postives = 401/968 (41.43%), Query Frame = 1
Query: 61 LNEIPPEVLELIRANQLPSDWNGNRWSRPPLSVLSSGWESALGWWNDVKQFGEGKSNKL--MLVGLENAGKSIIVRNLTGGSA----PGRADRTVGIEITP-EWKP-------LEEARLQISVWDFAGQADYYVSHQLFLTEGALFLLVVDLRKFSTEIESDADNFTDTGRCVYWWLDMLHMRVPGAAIALVGSHVDQMTS-------EEADRAGIDLHTVATNFIQEKASNVPRT----------QSIRCIDAES-----------TTTSEVDHARECVHFAQPSGSSESAAKPLILHDDVFKVSHDRGSVLELRRWITRAASGRECPPEFNFPAVDQIVPKAWVTAYDVMGTLVATKPYVLWSGAVEEFRKKMGAA*LVADD--DAWQVLLRAMKHREAEGGVLLSLEDASA------PVATD--MLHLNPSWLIELVRRLSDHNLVSEDKRRRGTAYQGLRSYAKKVEGVTIADLVDMHSLYCKSGRLNRDFLRFLWMHRKI-------GATDSPIHLTDAEFETIVSTMARLLVMY-ISRDADILVVPARLEEYGDHRIVDR------MQDVVLTIECSFGLVFP-PPGIVGRFIAWSAEQVGDCDACWQHGAFFNYKFQHAQYKVFVYEKPVEELHEDGTKCKFAGLVLGIQGLPVMAAEVLHNLKESLKTLVSDPVLGYPGIAGKGTMYF----APPKTTESKFLDDLRSTL-----DNIN---ERLGRIDGTVS----------------------QLLEQDL--------------LAASVEPS-EYPHRVLVRPELED-EDGEPPELIQHAGWDRWTKALTDIGSHK----FRLHFLCEHDSSVVPCGPEGRGYLIEQP--KEWVKKWLPLIQGSLWVLRVAVGAVSHVD-LPLDEVLSAFAKATSAELMASASNVTESIGNAAIPEFGEGATQDEIDRFIHLRGTAYKALCDFMSGVE 2592
L+ P V E + N W+ PP VL G A + D+ FG SN+L +LVGL NAGK+ + L G ++ P +RTVG+EI + P A L + +WDFAGQ YY +HQ+FLT GALF+LVVD+ +S + S D WLD+L RVPG+ + LVG+H D S + DR G + + QE A N R Q +R + + TT+++ E V + G S + + + V+ ++ +RR T SG + PA ++V + D +P++L+ A+ F + G L + + Q L A+ E +G +L++ D P + ++H+NP+W +L+RR+ D L+ ++ + L K+ ++A+L H + +G +++ +++FLW R + P +++ T+V ++ + M+ + + D +VP+ L ++ + + + + + + G P PPG++ R +AW ++ CW+ G F + +H V +YE +E +C G + A L ++ L+ LV DP G+PGI ++F K T + LD L S D++N + L R ++ Q L QD+ L SVE P ++V LED G + H D K L G +R+ FLC +D + CG +G GY +E +EW+K LP+I+ SLW+LRV + V+ D LP+D V+ + E A+ + I G+ D+++ + GTAY L ++ E
Sbjct: 162 LDVFPRAVAERFAVQNVSIYTAENPWTEPPADVLELGMAYAARFLKDLNDFGRTSSNRLKVVLVGLGNAGKTSVAVRLEGLASSKPLPTAEERTVGVEIRDIQLAPGPANGGSRGNAELDVKLWDFAGQRAYYDTHQMFLTPGALFVLVVDIFAYSEDGHSREDALEQ-------WLDILQARVPGSVVLLVGTHSDMFDSPADCSKRDIMDRVGRECKSARERARQESAGNSDREYAGVQDSRRYQPLRIVVVDELLALNLTPSGGVTTAQLQEHFEGVAYGVHDGYSFPSVNSEVPEPHLLAVA----TLEAVRRGATLRGSGGD-------PA--EVVRRLDGEKLD------EGQPFILFPEALSLFLEVAGEKSLFGGNATEGEQAFLAAITLHERQGAILVTRADGGGEKEDMKPASEQHLVIHVNPAWFADLIRRIVDVRLLDPAQQEK------LAEVIKRQSPASVAELSKQHGRFFLAGEVSKRYMKFLWKERDLELGPASPSLAAPPFEMSEETITTMVESLLAVRFMFRVRHNKDHYIVPSCLPDHVGCTVDAKKLLGLDVGGAIFSRKLQLGGEQPVPPGLIPRLLAWCSQGDARITTCWKRGVCFAFNRKHL---VLLYEHR-KEAGRSVIECHAMGSAHNEK-----AGGTLDDVVAELRRLVGDPKYGFPGI----WLFFDGGVEHQKATSAGELDKLLSRFAGELKDHMNVNFKELARKSNVIAGGVERHLRKGQEEMATSFNHQIQQLGQDMSRKLDCIAAVTSKCLLVSVEKDIPCPRLIMV---LEDVSPGSALSRLSHFRRDMVDKLLRREGEGPAPQCYRIRFLCAYDLTAGTCGKDGLGYKVEIQGWQEWLKACLPVIKVSLWLLRVGISVVTRADVLPVDGVIETLEEVAGEE----AAGILGEIDLEGRRSSGQDLV-DKVNAQEQVFGTAYAELAKWVQQRE 1076
BLAST of mRNA_H-canaliculatus_F_contig1483.3656.1 vs. uniprot
Match: D7FU35_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI) HSP 1 Score: 216 bits (549), Expect = 4.410e-54 Identity = 226/878 (25.74%), Postives = 376/878 (42.82%), Query Frame = 1
Query: 58 RLNEIPPEVLELIRANQLPSDWNGNRWSRPPLSVLSSGWESALGWWNDVKQFGEGKSNKL--MLVGLENAGKSIIVRNLT---GGSAPGRADRTVGIEITPEWK---PLEEA-----RLQISVWDFAGQADYYVSHQLFLTEGALFLLVVDLRKFSTEIESDADNFTDTGRCVYWWLDMLHMRVPGAAIALVGSHVDQMTSEEADRAGIDLHTVATNFIQEKASNVPRTQSIRCIDAESTTTSEVDHARECVHFAQPSGSSESAAKPLILHDDVFKV---SHDRGSVLELRRWITRAA-SGRECPPEFNFPAVDQIVPKAWVTAYDVM-------------------------GTLVATKPYVLWSGAVEEFRKKMGAA*LVADD------DAWQVLLRAMKHREAEGGVLLSLED--------------ASAPVATDMLHLNPSWLIELVRRLSDHNLVSEDKRRRGTAYQGLRSYAKKVEGVTIADLVDMHSLYCKSGRLNRDFLRFLWMH-RKIGATDS---PIHLTDAEFETIVSTMARLLVMYISRDADILVVPARLE-----------EYGDHRIVD-RMQDVVLTIECSF-GLVFPPPGIVGRFIAWSAEQVGDCDACWQHGAFFNYKFQHAQYKVFVYEKPVEELHEDGT---KCKFAGLVLGIQGLPVMAAEVLHNLKESLKTLVSDPVLGYPGIAGKGTMYFAPPKTTESKFLDDLRSTLDNINERLG---RIDGTVSQLLEQDLLAASVEPSEYPHRVLVRPELEDEDGEPPELIQHAGWDRWTKALTD-----------IGSHKFRLHFLCEHDSSVVPCGPEGRGYLIEQPKEWVKKWLPLIQGSLWV----LRVAVG-AVSHVD 2388
+L+ P V E A + N W PP V++ G A + D+ +G SN+L +LVGL AGK+ I L G S P +RTVG+EI P E L +S+WDFAGQ YY +HQ+FLT GALF+LVVD+ + TE +S D WL++L RVPG+ + LVG+H D A+ T T+ ++ + C A+ +E+ H G+ ++L +++ + S D + L++ + A +G + ++FP+V +VP+ ++ A + G + +V +S AV F K+ G+ + + ++ L A+K EA G +LL+ D A+A A ++H+NPS +LVRR+ D LV D R++ + + + V + + L D H + K+G +++D+L+FLW+ +G P+ +++A+ E +V ++ + MY RD VP R +I++ +M + + + G PPG+V R +AW G ACW+ G F +K + V +YE V + DGT +C G V A L ++ + + L++D G+PG+ G + + T D ++ L+ I + L + + + + QD+ P V V P E P + +++W+ L + + K R+ FLC +D S+ CGP G+GY + + W KK +P + + LRV +G A+ VD
Sbjct: 297 KLDVFPRLVAEGFAARNVTVGTENNPWKEPPAEVMNKGMAHAAVFLRDLDDYGRAWSNRLKVVLVGLGEAGKTSIATRLEDRLGSSCPKPEERTVGVEIRDIKLGPGPTNEGSGPNVELDVSLWDFAGQRAYYDTHQMFLTPGALFVLVVDMFTY-TEGQSREDALEQ-------WLEILQARVPGSVVLLVGTHTDLFAENAAEC------TRRTDRFKKDVEEIMTRLRCECDSAKDRVETELGEG----HTTDLKGNPRYQPLRVVLKEELLALDLTSSDGQDIDLLQQRLEHLAYNGYD---GYSFPSVRSVVPEPYLPAIATLEAVRRGADLRGSGRTREAVAQRLGEGDPKKRRSFVRFSEAVSLFTKQKGSMFSRVSNLFRRAGEPRRIFLAAVKSHEAHGAILLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLV--DPRQQAKVEEAMEA-CTSVRPMLLT-LTDQHKRFVKAGEVSKDYLKFLWLRDMDLGEASQEAPPLEMSEADVEVMVGSLLDVRFMYRVRDGQHAFVPDRYVVASCLPNKAGLNVDPGKILELKMGSAIYSQKLKLVGAHAVPPGLVPRLLAWCGRGEGRIKACWKRGVCFAFK----NHLVLLYE--VRAI--DGTSWIECHARGNVSDDDS----ARTALKDIGDQVHELINDHKYGFPGL---GLVRSGESEETVISSDSDHKALLERIVDVLRDQMNVKFMMDRSMRQDVAFLRWP---IPRLVCVLPAPESRAK--PLEEKDRSFEQWSATLRNWCVDGKRTGKGFATRKLRVFFLCPYDRSLAECGPGGQGYEVTELLGWAKKAMPFAEVGRALASIALRVCIGLAIPEVD 1129
BLAST of mRNA_H-canaliculatus_F_contig1483.3656.1 vs. uniprot
Match: A0A6H5L2L4_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L4_9PHAE) HSP 1 Score: 174 bits (441), Expect = 5.360e-41 Identity = 229/963 (23.78%), Postives = 389/963 (40.39%), Query Frame = 1
Query: 130 NRWSRPPLSVLSSGWESALGWWNDVKQFGEGKSNKL--MLVGLENAGKSIIVRNLTG---GSAPGRADRTVGIEITPEWK---PLEEA-----RLQISVWDFAGQADYYVSHQLFLTEGALFLLVVDLRKFSTEIESDADNFTDTGRCVYWWLDMLHMRVPGAAIALVGSHVDQMTSEEAD-RAGIDLHTVATNFIQEKASN------------VPRTQSIRCIDAESTTTSEVDHARECVHFAQPSGSSESAAKPLILHDDVFKV---SHDRGSVLELRRWITRAASGRECPPEFNFPAVDQIVPKAWVTAYDVMGTLVATKPYVLWSGAVEEFRKKMGAA*L-------VADDDAWQVLLRAMKHREAEGGVLLSLED--------------ASAPVATDMLHLNPSWLIELVRRLSDHNLVSEDKRRRGTAYQGLRSYAKKVEGVTIADLVDMHSLYCKSGRLNRDFLRFLWMH----RKIGATDSPIHLTDAEFETIVSTMARLLVMYISRDADILVVPARL-----------EEYGDHRIVD-RMQDVVLTIECSFGLVFP-PPGIVGRFIAWSAEQVGDCDACWQHGAFFNYKFQHAQYKVFVYEKPVEELHEDGT---KCKFAGLVLGIQGLPVMAAEVLHNLKESLKTLVSDPVLGYPGIAGKGTMYFAPPKTTESKFLDDLRSTLDNINERLGRIDGTVSQLLEQDLLAASVEPSEYPHRVLVRPELEDEDGEPPELIQHAGWDRWTKALTD-----------IGSHKFRLHFLCEHDSSVVPCGPEGRGYLIEQPKEWVKKWLPLIQGSLWV----LRVAVG-AVSHVDLPLD------EVLSAFAKAT---SAELMASASNVTESIGNAAIPEFGEGATQDEIDRFIHLRGTAYKALCDFMSGVESHTCLPRCLPRHRTRVVDWRENMDRV-QNPRTGRWVWVLRGNKDAYV 2730
N W PP V+ G + D+ +G N+L +LVGL AGK+ I L G S P +RTVG+EI P E L +S+WDFAGQ YY +HQ+FLT GALF+LVVD+ F+ E+ ++ + WL++L RVPG+ + LVG+H D + A+ D ++ ++N + C A+ +E+ H G+ ++L +D+ + S D + L+ + A + + + + G + +V +S AV F + + L + D++ ++ L A+K EA G + L+ D A+A A ++H+NPS +LVRR+ D LV+ R++ + + A + ++ L D H + K+G +++D+L+FLW+ R+ P+ +++A+ E +VS++ + MY RD VP R + +I++ + + + + + V PPG+V R ++ C + V +YE DGT +C G V A L ++ + + L+SD +PG+ G + + T D ++ L+ I + + R V ++++ + V +P LV E G P +++W+ L + + K R+ FLC +D S+ CGP G+GY + + EW KK +P + L + LRV +G A+ VD LS FA+ + E +AS + G A G G + + ++G Y+ L + + E RHR+ + M V + R W WV N D +V
Sbjct: 66 NPWKEPPAKVMEKGMAHTAVFLKDLDDYGRAWYNRLKVVLVGLGEAGKTSIATRLEGRLGSSCPKPEERTVGVEIRDIKLGPGPTNEGIGPNDELDVSLWDFAGQRAYYDTHQMFLTPGALFVLVVDM--FTYEVGQSKEDALEQ------WLEILQARVPGSIMLLVGTHTDLFKANAAECTRRTDSFKEGRSYCSTSSNNSYLSPWPTDVDDIMTRMRYECDSAKDRAEAELGEG----HTTDLKGNPRYQPLRVVLEEDLLALNLASSDWQDIDLLQHRLEYLAYNGGADLRGSGSTREAVAQRLRE------GNPKKRRSFVRFSEAVSLFAAQQEGSMLSWLSNSFLRDNEPRRIFLAAVKSHEAHGAIHLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVAP--RQQAKVEEAME--ACPLVRSSLLTLTDQHKRFIKTGEVSKDYLKFLWLRDMDLREASQEAPPLEMSEADVEVMVSSLLDVRFMYRVRDGQHAFVPDRYVVASCLPNKAGPDVDPGKILELKTGNAIYSQKLKLVRVHAVPPGLVPRLLS-----------C---------------HLVLLYEVRAT----DGTSWIECHARGNVFDES-----ARTALKDIGDQVDELISDHKNRFPGL---GLVRSGESEETVVYSDSDHKALLERIVD-VQRDQMNVKLMMDRSM-RQDVAFLRWPIPRLVCVLPAPESGAKPLEEGDRSFEQWSATLRNWCLGGKRTGKGFATRKLRMFFLCPYDRSIAECGPGGQGYEVTELVEWAKKAMPSAKVGLALASIALRVCIGLAIPEVDFKATLGTKAGGALSTFAEESLHSGVESVASIAGDRLDGGRAEGLPHGAGGHGAQQEWPSPMQGITYETLKEVIKSFEVDGM------RHRSPFPSFDVKMRLVDRGGRGAEWAWVRTKNIDQFV 960
BLAST of mRNA_H-canaliculatus_F_contig1483.3656.1 vs. uniprot
Match: D8LLG1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG1_ECTSI) HSP 1 Score: 171 bits (434), Expect = 5.360e-40 Identity = 188/731 (25.72%), Postives = 304/731 (41.59%), Query Frame = 1
Query: 64 NEIPPEVLELIRAN-QLPSDWNGNRWSRPPLSVLSSGWESALGWWNDVKQFGEG--KSNKLMLVGLENAGKSIIVRNLTGGS-APGRADRTVGIEITPE-WKPLEEARLQISVWDFAGQADYYVSHQLFLTEGALFLLVVDLRKFSTEIESDADNFTDTGRCVYWWLDMLHMRVPGAAIALVGSHVDQMTSEEADRAGI--DLHTVATNFIQEKASNVPRTQSIRCIDAESTTTSEVDHARECVHFAQPSGSSESAAKPLILH----DDVFKVSHDRGSVLELRRWITRAASGRECPPEFNFPAVDQIVPKAWVTAYDVMGTL-VATKP---------------------------YVLWSGAVEEFRKKMGAA*LVADDDAWQVLLRAMKHREAEGGVLLSLEDASAPVATDMLHLNPSWLIELVRRLSDHNLV--SEDKRRRGTAYQGLRSYAKKVEGVTIADLVDMHSLYCKSGRLNRDFLRFLWMHRKIGATDSPIHLTDAEFETIVSTMARLLVMYISRDADI------LVVPARLEEYGDHRIVDRMQDVV-----LTIECSFGLVFPPPGIVGRFIAWSAEQVGDCDACWQHGAFFNYKFQH--AQYKVFVYEKPVEELHEDGTKCKFAGLVLGIQGLPVMAAEVL-----------HNLKESLKTLVSDPVLGYPGIAGKGTMYFAPPKTTESKFLDDLRSTLDNINERLG-RIDGTVSQLLE 2058
++IP E ++A +L D GN W PP +V+ GW+ + + + Q G S K++LVG AGK+ + R L G A RT GI++ + W P + L++ +WDFAG DY+ +HQ+FLT+GAL LLVVDL KF ++ S G VY WLD L RVPG+A+ +V +H D + AG L T ++ K + + + E S+ A F S + S P LH V S D S + + W FP+V +IVP W + VM L V P + +WS A E ++ AA + LR + R + + L S ++HLNPSW+ L+R + DH L +ED+ ++ L++Y + G+ I +L++ H + +G L +FLRFLW G + + F +V TM M+ D +VPARL + +++D + + + PP I+ +F+ + G F N F+ A+ FV DG +C + + LP++ + +K+++K L+ + YPG+A + + TE+ + D L + ++ ++L R++ +S+ LE
Sbjct: 130 SDIPGATAERLKAMPELSVDLKGNPWETPPWNVIQGGWDQVVSFHEGLSQSGGQVVPSLKVVLVGAVGAGKTTLARGLLDGKIAQTLPPRTRGIDVHIQPWVPDFDPPLEVLIWDFAGHDDYHSTHQMFLTDGALHLLVVDLHKFDRDVLS-------RGGGVYIWLDSLLCRVPGSAVLVVATHADAFGDDHERSAGALEALKAAVTEHLETKRQDWLAAKRLE----ERELMSQARPASTGRDFMSESPADRSKPAPPSLHLCGFISVSGRSLDGLSTVGEKIWEVANEPA-------VFPSVRKIVPGIWRRVWAVMDALHVGADPDSAVRLEGPVVTIEGRDKHEFVTEEQAFEVWSHADRESATQLEAAGHFGEQ------LRLVSSRHFKAALNLRHMGGSVLAVCGLIHLNPSWINVLLREVLDHRLTDPNEDE----WWWKQLKAYERN-RGIPINELLETHRHFTTTGILTEEFLRFLWRDVLKG-------VDEKVFARLVETMTAHDAMFPCNDGVTEGNVREFMVPARLPDGVTGDSFAKLEDAMSRGTRMQFVIEIYAKYVPPAIIAKFLGGFGRD--------ESGVFRNLMFRTCWARGVAFV---------ADGRECLVRVGEVSARPLPMIEINIAGPDVNDVFKVGFEIKKNVKDLLRE---AYPGLAFDSSAHPRFENGTEA-WQDSLEALQKDLFDKLDQRLESVLSEFLE 803
BLAST of mRNA_H-canaliculatus_F_contig1483.3656.1 vs. uniprot
Match: A0A6P4ZQJ4_BRABE (malignant fibrous histiocytoma-amplified sequence 1 homolog n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4ZQJ4_BRABE) HSP 1 Score: 100 bits (249), Expect = 9.210e-18 Identity = 136/566 (24.03%), Postives = 238/566 (42.05%), Query Frame = 1
Query: 4 PPELGNLAVLKLLHLGKKRLNEIPPEVLELIRANQLPSDWNGNRWSRPPLSVLSSGWESALGWWNDVKQFGE-GKSNKLMLVGLENAGKSIIVRNLTGG-SAPGRAD-RTVGIEITPEWKPLEEARLQISVWDFAGQADYYVSHQLFLTEGALFLLVVDLRKFSTEIESDADNFTDTGRCVYWWLDMLHMRVPGAAIALVGSHVDQMTSEEADRAGIDLHTVATNFIQEKASNVPRTQSIRCIDAESTTTSEVDHARECVHFAQPSGSSESAAKPLILHDDVFKVSHDRG--SVLELRRWITRAASGRECPPEFNFPAVDQIVPKAWVTAYDVM---GTLVATKPYVLWSGAVEEFRKKMGAA*LVADDDAWQVLLRAMKHREAEGGVLLSLEDASAPVATDMLHLNPSWLIELVRRLSDHNLVSEDKRRRGTAYQGLRSYAKKVEGVTIADLVDMHSLYCKSGRLNRDFLRFLWMHRKIGATDSPIHLTDAEFETIVSTMARLLVMY-ISRDADIL-VVPARL-------EEYGDHRIVDRMQDVVLTIECSFGLVFPPPGIVGR 1650
P L + +K +++ + EIP ++++ + + GN PPL V +G E+ ++ D+K + K +L+G NAGK+ +VR S P + + RT GIEIT L + + S+WDFAGQ YY++HQ FL+ AL LLVV+L K+ + +S A + G W+ L +V + V +HVD+++ EE R H I E T + I+ + E ++E + ++ +P I H + VS + + L++ I A +E FP V + VPK W A + G ++ PY+ W ++ + + + Q + + + + G +L D + + + L PS ++++ + +V DK + Y+ Y K + M + K G L+ FLR LW K D F ++ M + + Y + + D+ P RL E+ G+ + +++++ F F PPG+ R
Sbjct: 553 PEALMQMKSIKKVNISNXXIKEIPETIMDMPKDVMVDLKLQGNPIIDPPLQVCQAGIENIRAFYEDLKTASSITQCLKTLLLGKYNAGKTSLVRAFQSNESEPTKPEERTPGIEITE----LRISDMTFSMWDFAGQEIYYITHQFFLSAKALMLLVVNLEKY--KCDSAASFSSSCGE----WMKNLIAKVGNPVVIPVVTHVDKLSPEEVKRRC--KHLAEKLKIDEDMRIDDLTTQLEEIEGKLADM-ETSESKEALKDSKKQTEVRLKERPTI-HPEPVPVSSVKSHEGIQYLKQVILNYAVNKE-----YFPEVGRRVPKTWADAEACVEREGEELSL-PYMTWDEFTALLKQNVPN---LQPESRIQTVAQYLH----DTGKILWYSDIES--LKNHVFLKPSLVVDIFK------MVIRDKFEQEINYESDNRYKKAKISSDVFQ--KMKTDLIKKGVLDTKFLRCLWSEVKEKCGQETF---DDIFNMLIELMRQFDLCYDLDCEEDVSHTTPERLLLPWYLTEDMGNKTQWESGGSPIISLQYQFPS-FIPPGLFAR 1077 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1483.3656.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1483.3656.1 >prot_H-canaliculatus_F_contig1483.3656.1 ID=prot_H-canaliculatus_F_contig1483.3656.1|Name=mRNA_H-canaliculatus_F_contig1483.3656.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=556bp MKHREAEGGVLLSLEDASAPVATDMLHLNPSWLIELVRRLSDHNLVSEDKback to top mRNA from alignment at H-canaliculatus_F_contig1483:363..4313+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1483.3656.1 ID=mRNA_H-canaliculatus_F_contig1483.3656.1|Name=mRNA_H-canaliculatus_F_contig1483.3656.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3951bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1483:363..4313+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1483:363..4313+ >mRNA_H-canaliculatus_F_contig1483.3656.1 ID=mRNA_H-canaliculatus_F_contig1483.3656.1|Name=mRNA_H-canaliculatus_F_contig1483.3656.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3336bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1483:363..4313+ (Hapterophycus canaliculatus Oshoro5f female)back to top |