mRNA_H-canaliculatus_F_contig1476.3619.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1476.3619.1
Unique NamemRNA_H-canaliculatus_F_contig1476.3619.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1476.3619.1 vs. uniprot
Match: D8LEE3_ECTSI (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEE3_ECTSI)

HSP 1 Score: 643 bits (1658), Expect = 1.710e-224
Identity = 326/346 (94.22%), Postives = 335/346 (96.82%), Query Frame = 1
Query:    1 MDLVTLLGNCQNPDHATRTQAEDALEQAGNTNMGQLLLSLVVELANEQQSEVIRQQAGLYIKVQLSAEEETIRAHKLQQWAHLDDATKAQIKAGSMQTLHSPVAGPRSTAALIVGKMGAIELPQDKWPELLPTLLGNVTGEFEERVKVATLQALGYMCDDWEPEDMNESQSNQILTCIVDGMRSDRPPAIRGAAARALINSLDFTRSNFETQQERDVIMQVVCEATQCTDANVRKAAYEAIWTIATLYYDRLQAYMQPLFELTLRTIREDQEDVALNAMEFWSSLCDEELEIMDENAFEREPGTARVSQNYVKAALASLMPVVLETLSKQDEDSADDLEHWDLGES 1038
            MDLVTLLGNCQNPDHATR QAEDALEQAGN+NMG+L+L LVVELANEQQSEVIRQQAGLYIKVQLSAEEE IRAHKLQQWA LD+ATKAQIKAGSMQTLHSPVAGPRSTAALIVGKMGAIELPQDKWPELLPTLLGNVTGEFEERVKVATLQALGYMCDDWEPEDMNE QSNQILTCIVDGMR DRPPAIRGAAARALINSLDFTRSNFETQQERDVIMQVVCEATQC DANVRKAAYEAIWTIATLYYDRLQAYMQPLFELTL TIR+DQEDVALNAMEFWSSLCDEELEIMDENA+EREPGT+RVSQNYVK AL SLMPVVLETLSKQDEDSADDLEHWDL ++
Sbjct:    1 MDLVTLLGNCQNPDHATRKQAEDALEQAGNSNMGELMLRLVVELANEQQSEVIRQQAGLYIKVQLSAEEEAIRAHKLQQWAMLDEATKAQIKAGSMQTLHSPVAGPRSTAALIVGKMGAIELPQDKWPELLPTLLGNVTGEFEERVKVATLQALGYMCDDWEPEDMNEGQSNQILTCIVDGMRPDRPPAIRGAAARALINSLDFTRSNFETQQERDVIMQVVCEATQCADANVRKAAYEAIWTIATLYYDRLQAYMQPLFELTLETIRKDQEDVALNAMEFWSSLCDEELEIMDENAYEREPGTSRVSQNYVKLALKSLMPVVLETLSKQDEDSADDLEHWDLAKA 346          
BLAST of mRNA_H-canaliculatus_F_contig1476.3619.1 vs. uniprot
Match: A0A835YZD7_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZD7_9STRA)

HSP 1 Score: 397 bits (1019), Expect = 1.650e-128
Identity = 204/348 (58.62%), Postives = 266/348 (76.44%), Query Frame = 1
Query:    1 MDLVTLLGNCQNPDHATRTQAEDALEQAGNTNMGQLLLSLVVELANEQQSEVIRQQAGLYIKVQLSAEEETIRAHKLQQWAHLDDATKAQIKAGSMQTLHSPV-AGPRSTAALIVGKMGAIELPQDKWPELLPTLLGNVTGEFEERVKVATLQALGYMCDDWEPEDMNESQSNQILTCIVDGMRSDRPPAIRGAAARALINSLDFTRSNFETQQERDVIMQVVCEATQCTDANVRKAAYEAIWTIATLYYDRLQAYMQPLFELTLRTIREDQEDVALNAMEFWSSLCDEELEIMDENAF-EREPGTARVSQNYVKAALASLMPVVLETLSKQDEDSADDLEHWDLGES 1038
            MDL TLL NCQNPD   R  AEDAL QA   ++GQL+L+LV EL NEQQ E++RQQAG+Y+K+ LSA ++ IR  KL  W  ++   K+QIKAG +QTLHS V A  R TAAL++GKMGAI+LP++ WPE+L  LL NVTG+  E  KV++L+ALGYMCD+WEP+DM++ Q+NQILTCIVDG+R+DRP ++R AA +AL+NSLDFT +NFETQ ERD++M+V+CEATQ TD  VR+ AYE I +IA++YY +LQ YM+ LF+LTLRTI+ED+ +VAL A+EFWS+LCDEELEI D  A+ E      R    YVK AL  L P++LE L+KQ+E+S +D   W + E+
Sbjct:    1 MDLPTLLANCQNPDANVRKSAEDALAQAAQQDLGQLMLALVGELTNEQQQEILRQQAGMYVKLLLSAGDDAIRERKLNDWERINLQVKSQIKAGVLQTLHSQVSATARHTAALVIGKMGAIDLPKNMWPEMLQQLLNNVTGQATEGTKVSSLEALGYMCDEWEPQDMDQQQTNQILTCIVDGIRADRPNSVRLAAVQALLNSLDFTSANFETQAERDMLMRVICEATQSTDTAVRRVAYECISSIASMYYSKLQPYMEVLFQLTLRTIKEDEVEVALQALEFWSALCDEELEIKDAVAYLEDGEKPERECAEYVKLALPHLTPLLLECLTKQEEESNED--DWGIAEA 346          
BLAST of mRNA_H-canaliculatus_F_contig1476.3619.1 vs. uniprot
Match: A0A6U3SM86_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SM86_9STRA)

HSP 1 Score: 292 bits (748), Expect = 2.730e-88
Identity = 166/352 (47.16%), Postives = 228/352 (64.77%), Query Frame = 1
Query:    4 DLVTLLGNCQNPDHATRTQAEDALEQAGNTNMGQLLLSLVVELANEQQSEVIRQQAGLYIKVQLSAEEETIRAHKLQQWAHLDDATKAQIKAGSMQTLHSPVAGPRSTAALIVGKMGAIELPQDKWPELLPTLLGNVTGEFE-ERVKVATLQALGYMCD-----DWEPEDMNESQSNQILTCIVDGMRSDRPPAIRGAAARALINSLDFTRSNFETQQERDVIMQVVCEATQCTDANVRKAAYEAIWTIATLYYDRLQAYMQPLFELTLRTIREDQEDVALNAMEFWSSLCDEELEIMDENAFEREPG----TARVSQNYVKAALASLMPVVLETLSKQDEDSADDLEHWDL 1029
            DL   L  CQNPD + RT AE AL+ A NTN+ +  L+LV EL+ E +    RQ AGL+ K  L A++E ++  +  +W  +D A +A +K   + +L SP   PR TAA    ++ A+ELP ++W E L TL+ NVT   + + VK+++L+ LG+ C+     D  P D+    ++++LT IVDG+R+DRP AIR AAA AL NSL FTR N E + ER++IMQ +CEATQ  D+ VR AAYE I  I   YYD+LQ YMQ LF+LT  TI+ D+E VAL A+EFWS+LCDEE+E++DE A   E G    + R    YV AAL  L+P++ ETL+KQDED+  D + W+L
Sbjct:    3 DLTATLLGCQNPDPSVRTAAEQALQNAENTNLPEFCLALVTELSTEGKDLAARQLAGLHFKNLLVAKDEALQTARHDKWKAMDPAARASVKTCLLASLRSPETAPRHTAAQACAEVAAVELPYNEWQEFLATLMENVTSNDQPDGVKISSLECLGFTCERLAVIDNAP-DIAPDTTDRMLTTIVDGIRNDRPDAIRFAAATALRNSLLFTRKNMENENERNMIMQTICEATQSADSRVRGAAYECISQITFQYYDKLQPYMQTLFQLTFNTIKNDEESVALQAIEFWSTLCDEEMELIDEAAECAERGIPVESGRECVRYVAAALEHLVPLLTETLTKQDEDADVDEDTWNL 353          
BLAST of mRNA_H-canaliculatus_F_contig1476.3619.1 vs. uniprot
Match: A2ZLT1_ORYSI (Importin N-terminal domain-containing protein n=1 Tax=Oryza sativa subsp. indica TaxID=39946 RepID=A2ZLT1_ORYSI)

HSP 1 Score: 288 bits (736), Expect = 2.000e-87
Identity = 156/344 (45.35%), Postives = 227/344 (65.99%), Query Frame = 1
Query:    1 MDLVTLLGNCQNPDHATRTQAEDALEQAGNTNMGQLLLSLVVELANEQQSEVIRQQAGLYIKVQLSAEEETIRAHKLQQWAHLDDATKAQIKAGSMQTLHSPVAGPRSTAALIVGKMGAIELPQDKWPELLPTLLGNVTGEFEERVKVATLQALGYMCDDWEPEDMNESQSNQILTCIVDGMR-SDRPPAIRGAAARALINSLDFTRSNFETQQERDVIMQVVCEATQCTDANVRKAAYEAIWTIATLYYDRLQAYMQPLFELTLRTIREDQEDVALNAMEFWSSLCDEELEIMDENAFEREPGTARVSQNYVKAALASLMPVVLETLSKQDEDSADDLEHWDL 1029
            +D+  +L + Q+PD ATR  AE++L+Q    N+   L SL  ELANE++ E  R+ AGL +K  L A+E+  +    Q+W  LD   KAQIK   +QTL SPVA  RST++ ++ K+  IE+PQ +WPEL+ +LL N+  + +  VK ATL+ LGY+C++  PE +++ Q N+ILT +V GM  S+    +R AA RAL N+L F + NF    ERD IM+VVCEATQ TD  +R+AA+E +  I++ YYD+L  YMQ +F +T + +R D+E VAL A+EFWSS+CDEE++I+DE + E    +      ++K AL +L+P++LETL KQ+ED   D   W+L
Sbjct:    3 LDITQVLLSAQSPDGATRKLAEESLKQFQEQNLPGFLFSLSNELANEEKPEESRRLAGLILKNALDAKEQHRKNELFQRWLALDVGVKAQIKGLLLQTLSSPVASARSTSSQVIAKVAGIEIPQKQWPELIASLLSNIH-QVQPNVKQATLETLGYLCEEVSPEAVDQDQVNKILTAVVQGMNASEGNSDVRLAATRALYNALGFAQVNFSNDMERDYIMRVVCEATQSTDVKIRQAAFECLVAISSTYYDKLATYMQDIFNITAKAVRGDEESVALQAIEFWSSICDEEIDILDEYSSEFTADSDVPCYYFIKQALPALVPMLLETLLKQEEDQDLDEGAWNL 345          
BLAST of mRNA_H-canaliculatus_F_contig1476.3619.1 vs. uniprot
Match: A0A7S1BFW6_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BFW6_9STRA)

HSP 1 Score: 288 bits (737), Expect = 9.310e-87
Identity = 163/344 (47.38%), Postives = 223/344 (64.83%), Query Frame = 1
Query:    4 DLVTLLGNCQNPDHATRTQAEDALEQAGNTNMGQLLLSLVVELANEQQSEVIRQQAGLYIKVQLSAEEETIRAHKLQQWAHLDDATKAQIKAGSMQTLHSPVAGPRSTAALIVGKMGAIELPQDKWPELLPTLLGNVTGEFEERVKVATLQALGYMCDDWEPEDMNESQSNQILTCIVDGMRSDRPPAIRGAAARALINSLDFTRSNFETQQERDVIMQVVCEATQCTDANVRKAAYEAIWTIATLYYDRLQAYMQPLFELTLRTIREDQEDVALNAMEFWSSLCDEELEIMDENAFEREPG--TARVSQNYVKAALASLMPVVLETLSKQDEDSADDLEHWDL 1029
            DL   L  CQNPD   R  AE AL  A   N+ Q + +L+ EL  E +    RQ AGL++K  L+A++ TIRA K+Q W  +D A K QIKA  +Q L S     R TAA    ++ AI+LP+  WPEL+P LL  VT   E+ +K   L+ LG+  +  + ++++++  N +LT IVDG+R DR   IR AAA AL +SL FTRSNF+ + ERD+IMQ +CEATQCTD  VR AAYE I  IA  YY++L  YM  L +LT   I  +Q++VA+ A+EFWS+LC+EE++IMDE A   E G    RVS NY+ AAL  L+P++++TL+KQD+D  DD ++W+L
Sbjct:    3 DLAATLLACQNPDPNIRNAAEQALLTAEQNNLPQFMTALIQELGTEGRDINGRQLAGLHLKNLLAAKDSTIRATKVQTWRDMDPAGKVQIKASLLQILSSSEYTARHTAAQAAAEIAAIDLPESAWPELIPYLLKTVTDSGEDSLKTTALECLGFTSERLDSDEIDQATINLMLTAIVDGIRPDRSNDIRLAAAVALRHSLLFTRSNFDNKSERDMIMQTICEATQCTDQRVRSAAYECIVQIAFCYYEKLTDYMTTLAQLTFGAISGEQDEVAMQAVEFWSTLCEEEIDIMDETADLTEQGIPAQRVSSNYISAALEHLVPLLVKTLTKQDDDVDDD-QNWNL 345          
BLAST of mRNA_H-canaliculatus_F_contig1476.3619.1 vs. uniprot
Match: A0A8K1CGU0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGU0_PYTOL)

HSP 1 Score: 287 bits (735), Expect = 1.700e-86
Identity = 164/346 (47.40%), Postives = 225/346 (65.03%), Query Frame = 1
Query:    1 MDLVTLLGNCQNPDHATRTQAEDALEQAGNTNMGQLLLSLVVELANEQQSEVIRQQAGLYIKVQLSAEEETIRAHKLQQWAHLDDATKAQIKAGSMQTLHSPVAGPRSTAALIVGKMGAIELPQDKWPELLPTLLGNVTGEFEERVKVATLQALGYMCDDWEPEDMNESQSNQILTCIVDGMRSDRPPAIRGAAARALINSLDFTRSNFETQQERDVIMQVVCEATQCTDANVRKAAYEAIWTIATLYYDRLQAYMQPLFELTLRTIREDQEDVALNAMEFWSSLCDEELEIMDENAF-EREPGTARV--SQNYVKAALASLMPVVLETLSKQDEDSADDLEHWDL 1029
            MD+   L N Q+PD ATR QAE+ L  A NT MGQ +++LV  LA E  + V RQ AGLY+K  L A+++ ++  K+Q W  +D A +AQIK G++  L S  A  R T+A +V K+G+IELP+ +WP LL  LL NVT   +  +  ATL+ LG++CD+ E   ++E  +N+ILT IVDG+R DRP  I+  A  AL NSL+F   NF+ + ERD IM+ VCEATQ TD   R  +YE I TIA+LYY+ LQ YM+ L  LT   I  DQ +V L A+EFWSS+CD E+++++E  + E E  T  V     YV+A LA+L+P++ ETL +QDED  +D   W+L
Sbjct:    1 MDISAALLNTQSPDLATRQQAEEFLNNALNTQMGQFMVTLVQALAAEDFAVVGRQAAGLYLKNVLDAKDDFLQQQKVQAWMGMDPAIRAQIKDGALSVLQSNDATARHTSAQLVAKLGSIELPEKEWPGLLDQLLSNVTSGHDGCIH-ATLECLGFLCDELEDASIDEQDTNRILTAIVDGIREDRPQQIQYVAVMALRNSLEFVSENFKRKGERDHIMRKVCEATQSTDLRTRVVSYECIATIASLYYEYLQEYMETLCNLTFTAITSDQAEVGLQALEFWSSMCDVEIDLLEELHYAELEGSTDGVIPCNRYVQAVLATLIPILTETLKQQDEDQDED--SWNL 343          
BLAST of mRNA_H-canaliculatus_F_contig1476.3619.1 vs. uniprot
Match: A0A7S3M7V8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7V8_9STRA)

HSP 1 Score: 278 bits (712), Expect = 2.630e-86
Identity = 157/347 (45.24%), Postives = 222/347 (63.98%), Query Frame = 1
Query:    1 MDLVTLLGNCQNPDHATRTQAEDALEQAGNTNMGQLLLSLVVELANEQQSEVIRQQAGLYIKVQLSAEEETIRAHKLQQWAHLDDATKAQIKAGSMQTLHSPVAGPRSTAALIVGKMGAIELPQDKWPELLPTLLGNV-TGEFEERVKVATLQALGYMCDDWEPEDMNESQSNQILTCIVDGMRSDRPPAIRGAAARALINSLDFTRSNFETQQERDVIMQVVCEATQCTDANVRKAAYEAIWTIATLYYDRLQAYMQPLFELTLRTIREDQEDVALNAMEFWSSLCDEELEIMDENAFEREPGTARVSQNYVK---AALASLMPVVLETLSKQDEDSADDLEHWDL 1029
            MDL T+L N Q+P+   R QAE  L QA     G  LL+L VELA E +    RQ AGLYIK  ++A ++ I   K  QW   D AT++QI+AG ++ + SPV     TAA I+   GA+++P++ WP+LL  L  N+ + E ++  KVA+L+ALGYMCD   PE ++ +  NQIL+ I+DGMRSDR   +R AA  AL NSLDFT  NFE Q ER+ IMQ +CEATQ ++  +R+ AYE   TIA LYYD+LQ Y + +F LTL  I +D   V + A+E W+++CD E+ ++ +     E G A VS +Y+K    A  SL P++L+ ++KQ+ED AD+ + W++
Sbjct:    1 MDLATVLQNAQHPNPEIRNQAEAYLNQAVEAQYGPFLLALTVELATESRPAPGRQLAGLYIKNLITATDDAILERKTNQWLQCDPATQSQIRAGFLEAIKSPVQVVSHTAAQILAAYGAVDVPRNAWPDLLAALFNNINSAEIQDVTKVASLEALGYMCDVMSPEAVDNNVVNQILSAIIDGMRSDRRNDVRLAAVTALNNSLDFTSQNFENQVERNAIMQAICEATQASEVKIRERAYECFATIADLYYDKLQPYAETIFNLTLSAISKDDPAVGMQAIELWNTICDTEVNLLADI----EDGDANVS-DYLKLTEVAAPSLTPLLLQCMTKQEED-ADEDDAWNI 341          
BLAST of mRNA_H-canaliculatus_F_contig1476.3619.1 vs. uniprot
Match: A0A0E0RIX5_ORYRU (Importin N-terminal domain-containing protein n=1 Tax=Oryza rufipogon TaxID=4529 RepID=A0A0E0RIX5_ORYRU)

HSP 1 Score: 288 bits (737), Expect = 4.700e-86
Identity = 156/344 (45.35%), Postives = 227/344 (65.99%), Query Frame = 1
Query:    1 MDLVTLLGNCQNPDHATRTQAEDALEQAGNTNMGQLLLSLVVELANEQQSEVIRQQAGLYIKVQLSAEEETIRAHKLQQWAHLDDATKAQIKAGSMQTLHSPVAGPRSTAALIVGKMGAIELPQDKWPELLPTLLGNVTGEFEERVKVATLQALGYMCDDWEPEDMNESQSNQILTCIVDGMR-SDRPPAIRGAAARALINSLDFTRSNFETQQERDVIMQVVCEATQCTDANVRKAAYEAIWTIATLYYDRLQAYMQPLFELTLRTIREDQEDVALNAMEFWSSLCDEELEIMDENAFEREPGTARVSQNYVKAALASLMPVVLETLSKQDEDSADDLEHWDL 1029
            +D+  +L + Q+PD ATR  AE++L+Q    N+   L SL  ELANE++ E  R+ AGL +K  L A+E+  +    Q+W  LD   KAQIK   +QTL SPVA  RST++ ++ K+  IE+PQ +WPEL+ +LL N+  + +  VK ATL+ LGY+C++  PE +++ Q N+ILT +V GM  S+    +R AA RAL N+L F + NF    ERD IM+VVCEATQ TD  +R+AA+E +  I++ YYD+L  YMQ +F +T + +R D+E VAL A+EFWSS+CDEE++I+DE + E    +      ++K AL +L+P++LETL KQ+ED   D   W+L
Sbjct:   92 LDITQVLLSAQSPDGATRKLAEESLKQFQEQNLPGFLFSLSNELANEEKPEESRRLAGLILKNALDAKEQHRKNELFQRWLALDVGVKAQIKGFLLQTLSSPVASARSTSSQVIAKVAGIEIPQKQWPELIASLLSNIH-QVQPNVKQATLETLGYLCEEVSPEAVDQDQVNKILTAVVQGMNASEGNSDVRLAATRALYNALGFAQVNFSNDMERDYIMRVVCEATQSTDVKIRQAAFECLVAISSTYYDKLATYMQDIFNITAKAVRGDEESVALQAIEFWSSICDEEIDILDEYSSEFTADSDVPCYYFIKQALPALVPMLLETLLKQEEDQDLDEGAWNL 434          
BLAST of mRNA_H-canaliculatus_F_contig1476.3619.1 vs. uniprot
Match: K3ZC75_SETIT (Importin N-terminal domain-containing protein n=60 Tax=Poaceae TaxID=4479 RepID=K3ZC75_SETIT)

HSP 1 Score: 284 bits (726), Expect = 4.380e-85
Identity = 154/344 (44.77%), Postives = 226/344 (65.70%), Query Frame = 1
Query:    1 MDLVTLLGNCQNPDHATRTQAEDALEQAGNTNMGQLLLSLVVELANEQQSEVIRQQAGLYIKVQLSAEEETIRAHKLQQWAHLDDATKAQIKAGSMQTLHSPVAGPRSTAALIVGKMGAIELPQDKWPELLPTLLGNVTGEFEERVKVATLQALGYMCDDWEPEDMNESQSNQILTCIVDGMR-SDRPPAIRGAAARALINSLDFTRSNFETQQERDVIMQVVCEATQCTDANVRKAAYEAIWTIATLYYDRLQAYMQPLFELTLRTIREDQEDVALNAMEFWSSLCDEELEIMDENAFEREPGTARVSQNYVKAALASLMPVVLETLSKQDEDSADDLEHWDL 1029
            +D+  +L + Q+ D A R  AE++L+Q    N+   LLSL  ELANE++ E  R+ AGL +K  L A+E+  ++   Q+W  LD   KAQIK   +QTL SPVA  RSTA+ ++ K+  IE+PQ +WPEL+ +LL N+  + +  VK ATL+ LGY+C++  PE +++ Q N+ILT +V GM  S+    +R AA RAL N+L F + NF    ERD IM+VVCEATQ  +  +R+AA+E +  I++ YYD+L  YMQ +F +T + +R D+E VAL A+EFWSS+CDEE++I+DE + E    +      ++K AL +L+P++LETL KQ+ED   D   W+L
Sbjct:    3 LDVTQVLLSAQSADGAIRKHAEESLKQFQEQNLPGFLLSLSTELANEEKPEESRRLAGLILKNALDAKEQHRKSELFQRWLALDAGAKAQIKGLLLQTLTSPVASARSTASQVIAKVAGIEIPQKQWPELIGSLLSNIH-QVQPNVKQATLETLGYLCEEVSPEAVDQDQVNKILTAVVQGMNASEANSDVRLAATRALYNALGFAQVNFSNDMERDYIMRVVCEATQSPEVKIRQAAFECLVAISSTYYDKLATYMQDIFNITAKAVRGDEESVALQAIEFWSSICDEEIDILDEYSSEFTADSDVPCYYFIKQALPALVPMLLETLLKQEEDQDLDEGAWNL 345          
BLAST of mRNA_H-canaliculatus_F_contig1476.3619.1 vs. uniprot
Match: A0A426ZAB8_ENSVE (Importin N-terminal domain-containing protein n=9 Tax=commelinids TaxID=4734 RepID=A0A426ZAB8_ENSVE)

HSP 1 Score: 282 bits (721), Expect = 7.920e-85
Identity = 152/344 (44.19%), Postives = 225/344 (65.41%), Query Frame = 1
Query:    1 MDLVTLLGNCQNPDHATRTQAEDALEQAGNTNMGQLLLSLVVELANEQQSEVIRQQAGLYIKVQLSAEEETIRAHKLQQWAHLDDATKAQIKAGSMQTLHSPVAGPRSTAALIVGKMGAIELPQDKWPELLPTLLGNVTGEFEERVKVATLQALGYMCDDWEPEDMNESQSNQILTCIVDGMR-SDRPPAIRGAAARALINSLDFTRSNFETQQERDVIMQVVCEATQCTDANVRKAAYEAIWTIATLYYDRLQAYMQPLFELTLRTIREDQEDVALNAMEFWSSLCDEELEIMDENAFEREPGTARVSQNYVKAALASLMPVVLETLSKQDEDSADDLEHWDL 1029
            M++  +L N Q+ D   R  AE++L+Q    N    LLSL  ELAN ++    R+ AGL +K  L A+E+  +   +Q+W  LD A KAQ+KA  +QTL SPV   RSTA+ ++ K+  IELPQ +WPEL+ +LL N+  + +  VK ATL+ LGY+C++  P+ +++ Q N+ILT +V GM  S+    +R AA RAL N+L F ++NF    ERD IM+VVCEAT C +  +R+AA+E +  I++ YYD+L +YMQ +F +T + +RED+E VAL A+EFWSS+CDEE++I+DE   +    +      ++K AL +L+P++LETL KQ+ED   D   W+L
Sbjct:    1 MEVTQILLNAQSVDGTVRKHAEESLQQFQEQNFPTFLLSLSSELANNEKPVDSRKLAGLILKNALDAKEQHRKNELVQRWLSLDVAVKAQVKACLLQTLSSPVPDARSTASQVIAKIAGIELPQKQWPELIGSLLSNIH-QLQPHVKQATLETLGYICEEVSPQVVDQDQVNKILTAVVQGMNASEGSTDVRLAATRALYNALGFAQANFSNDMERDYIMRVVCEATLCPELKIRQAAFECLVAISSTYYDKLASYMQDIFSITAKAVREDKEPVALQAIEFWSSICDEEIDILDEYGGDFTADSDIPCYYFIKQALPALIPMLLETLLKQEEDQDQDEGAWNL 343          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1476.3619.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEE3_ECTSI1.710e-22494.22Importin N-terminal domain-containing protein n=2 ... [more]
A0A835YZD7_9STRA1.650e-12858.62Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
A0A6U3SM86_9STRA2.730e-8847.16Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A2ZLT1_ORYSI2.000e-8745.35Importin N-terminal domain-containing protein n=1 ... [more]
A0A7S1BFW6_9STRA9.310e-8747.38Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A8K1CGU0_PYTOL1.700e-8647.40Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S3M7V8_9STRA2.630e-8645.24Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A0E0RIX5_ORYRU4.700e-8645.35Importin N-terminal domain-containing protein n=1 ... [more]
K3ZC75_SETIT4.380e-8544.77Importin N-terminal domain-containing protein n=60... [more]
A0A426ZAB8_ENSVE7.920e-8544.19Importin N-terminal domain-containing protein n=9 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1476contigH-canaliculatus_F_contig1476:20821..26378 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score647.1
Seed ortholog evalue4.6e-183
Seed eggNOG ortholog2880.D8LEE3
Preferred nameKPNB1
KEGG koko:K14293
KEGG TC1.I.1
KEGG Pathwayko03013,map03013
GOsGO:0000003,GO:0000060,GO:0000070,GO:0000166,GO:0000226,GO:0000278,GO:0000280,GO:0000737,GO:0000819,GO:0001775,GO:0001882,GO:0001883,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0005048,GO:0005085,GO:0005087,GO:0005088,GO:0005215,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005654,GO:0005737,GO:0005783,GO:0005819,GO:0005829,GO:0005856,GO:0006139,GO:0006259,GO:0006308,GO:0006309,GO:0006605,GO:0006606,GO:0006607,GO:0006610,GO:0006612,GO:0006629,GO:0006644,GO:0006650,GO:0006656,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006887,GO:0006913,GO:0006915,GO:0006921,GO:0006928,GO:0006955,GO:0006996,GO:0006997,GO:0006999,GO:0007010,GO:0007017,GO:0007018,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007079,GO:0007080,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0007275,GO:0008092,GO:0008104,GO:0008139,GO:0008150,GO:0008152,GO:0008219,GO:0008270,GO:0008536,GO:0008565,GO:0008610,GO:0008654,GO:0009056,GO:0009057,GO:0009058,GO:0009507,GO:0009536,GO:0009790,GO:0009792,GO:0009889,GO:0009987,GO:0010494,GO:0012501,GO:0012505,GO:0015031,GO:0015630,GO:0015833,GO:0016020,GO:0016021,GO:0016032,GO:0016043,GO:0016192,GO:0017016,GO:0017038,GO:0017076,GO:0019001,GO:0019048,GO:0019054,GO:0019058,GO:0019216,GO:0019218,GO:0019222,GO:0019439,GO:0019637,GO:0019894,GO:0019899,GO:0019904,GO:0022402,GO:0022411,GO:0022607,GO:0023052,GO:0030141,GO:0030162,GO:0030262,GO:0030953,GO:0031072,GO:0031090,GO:0031122,GO:0031224,GO:0031267,GO:0031291,GO:0031323,GO:0031399,GO:0031410,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0031983,GO:0031984,GO:0032268,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032940,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034399,GO:0034504,GO:0034613,GO:0034622,GO:0034641,GO:0034655,GO:0034774,GO:0035556,GO:0035580,GO:0035639,GO:0035770,GO:0035821,GO:0036094,GO:0036230,GO:0036464,GO:0040001,GO:0042119,GO:0042277,GO:0042581,GO:0042886,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043186,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043299,GO:0043312,GO:0043933,GO:0044003,GO:0044068,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044265,GO:0044270,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0044766,GO:0044877,GO:0045017,GO:0045055,GO:0045184,GO:0045321,GO:0045495,GO:0045540,GO:0046470,GO:0046474,GO:0046483,GO:0046486,GO:0046700,GO:0046794,GO:0046872,GO:0046890,GO:0046903,GO:0046907,GO:0046914,GO:0046931,GO:0048285,GO:0048856,GO:0050000,GO:0050789,GO:0050794,GO:0050810,GO:0050896,GO:0051020,GO:0051169,GO:0051170,GO:0051171,GO:0051179,GO:0051225,GO:0051233,GO:0051234,GO:0051246,GO:0051276,GO:0051292,GO:0051293,GO:0051303,GO:0051305,GO:0051310,GO:0051640,GO:0051641,GO:0051649,GO:0051653,GO:0051656,GO:0051701,GO:0051704,GO:0051716,GO:0051817,GO:0051879,GO:0060188,GO:0060205,GO:0060255,GO:0060293,GO:0061608,GO:0062012,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070727,GO:0070925,GO:0071702,GO:0071704,GO:0071705,GO:0071782,GO:0071840,GO:0072594,GO:0072657,GO:0072686,GO:0075733,GO:0080090,GO:0090150,GO:0090181,GO:0090304,GO:0090305,GO:0090307,GO:0090407,GO:0097159,GO:0097164,GO:0097194,GO:0097367,GO:0097435,GO:0097708,GO:0098772,GO:0098813,GO:0098827,GO:0099503,GO:0101002,GO:0106118,GO:0140014,GO:0140104,GO:0140142,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902579,GO:1902850,GO:1902930,GO:1903047,GO:1903320,GO:1904813,GO:1990023,GO:1990904
EggNOG free text desc.ribosomal protein import into nucleus
EggNOG OGsCOG5215@1,KOG1241@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009,ko03036
Hectar predicted targeting categoryother localisation
Exons8
Model size1038
Cds size1038
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1476.3619.1prot_H-canaliculatus_F_contig1476.3619.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1476 20821..26378 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929220.5462818-CDS-H-canaliculatus_F_contig1476:20820..208601622929220.5462818-CDS-H-canaliculatus_F_contig1476:20820..20860Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1476 20821..20860 +
1696845723.099773-CDS-H-canaliculatus_F_contig1476:20820..208601696845723.099773-CDS-H-canaliculatus_F_contig1476:20820..20860Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1476 20821..20860 +
1622929220.5644617-CDS-H-canaliculatus_F_contig1476:21330..213891622929220.5644617-CDS-H-canaliculatus_F_contig1476:21330..21389Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1476 21331..21389 +
1696845723.1138852-CDS-H-canaliculatus_F_contig1476:21330..213891696845723.1138852-CDS-H-canaliculatus_F_contig1476:21330..21389Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1476 21331..21389 +
1622929220.578567-CDS-H-canaliculatus_F_contig1476:22305..224971622929220.578567-CDS-H-canaliculatus_F_contig1476:22305..22497Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1476 22306..22497 +
1696845723.1263504-CDS-H-canaliculatus_F_contig1476:22305..224971696845723.1263504-CDS-H-canaliculatus_F_contig1476:22305..22497Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1476 22306..22497 +
1622929220.5896747-CDS-H-canaliculatus_F_contig1476:23114..231951622929220.5896747-CDS-H-canaliculatus_F_contig1476:23114..23195Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1476 23115..23195 +
1696845723.1365783-CDS-H-canaliculatus_F_contig1476:23114..231951696845723.1365783-CDS-H-canaliculatus_F_contig1476:23114..23195Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1476 23115..23195 +
1622929220.6026466-CDS-H-canaliculatus_F_contig1476:23720..238281622929220.6026466-CDS-H-canaliculatus_F_contig1476:23720..23828Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1476 23721..23828 +
1696845723.1463857-CDS-H-canaliculatus_F_contig1476:23720..238281696845723.1463857-CDS-H-canaliculatus_F_contig1476:23720..23828Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1476 23721..23828 +
1622929220.6189923-CDS-H-canaliculatus_F_contig1476:24883..250631622929220.6189923-CDS-H-canaliculatus_F_contig1476:24883..25063Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1476 24884..25063 +
1696845723.1565633-CDS-H-canaliculatus_F_contig1476:24883..250631696845723.1565633-CDS-H-canaliculatus_F_contig1476:24883..25063Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1476 24884..25063 +
1622929220.6332824-CDS-H-canaliculatus_F_contig1476:25507..257141622929220.6332824-CDS-H-canaliculatus_F_contig1476:25507..25714Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1476 25508..25714 +
1696845723.1663766-CDS-H-canaliculatus_F_contig1476:25507..257141696845723.1663766-CDS-H-canaliculatus_F_contig1476:25507..25714Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1476 25508..25714 +
1622929220.6482193-CDS-H-canaliculatus_F_contig1476:26207..263781622929220.6482193-CDS-H-canaliculatus_F_contig1476:26207..26378Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1476 26208..26378 +
1696845723.175704-CDS-H-canaliculatus_F_contig1476:26207..263781696845723.175704-CDS-H-canaliculatus_F_contig1476:26207..26378Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1476 26208..26378 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1476.3619.1

>prot_H-canaliculatus_F_contig1476.3619.1 ID=prot_H-canaliculatus_F_contig1476.3619.1|Name=mRNA_H-canaliculatus_F_contig1476.3619.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=346bp
MDLVTLLGNCQNPDHATRTQAEDALEQAGNTNMGQLLLSLVVELANEQQS
EVIRQQAGLYIKVQLSAEEETIRAHKLQQWAHLDDATKAQIKAGSMQTLH
SPVAGPRSTAALIVGKMGAIELPQDKWPELLPTLLGNVTGEFEERVKVAT
LQALGYMCDDWEPEDMNESQSNQILTCIVDGMRSDRPPAIRGAAARALIN
SLDFTRSNFETQQERDVIMQVVCEATQCTDANVRKAAYEAIWTIATLYYD
RLQAYMQPLFELTLRTIREDQEDVALNAMEFWSSLCDEELEIMDENAFER
EPGTARVSQNYVKAALASLMPVVLETLSKQDEDSADDLEHWDLGES
back to top

mRNA from alignment at H-canaliculatus_F_contig1476:20821..26378+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1476.3619.1 ID=mRNA_H-canaliculatus_F_contig1476.3619.1|Name=mRNA_H-canaliculatus_F_contig1476.3619.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5558bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1476:20821..26378+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGACCTCGTGACGCTATTGGGCAACTGTCAGAATCCGGGTGAGACGCT ATCTAGCCTCCTTGCATTGTTTGGTTACCGGTCCCCTCCTCCACGCTAGT GCCGCCTTGCTGCTGCGCGCAGGGGCGCCGGTCTCAGTTTCCAATGTGGG CAGCCGCATTTTGTTCCCCCCAAAATAATCCCCGTGGCAACTAGTTTTCA CCTAGGTTTAGAGGGAAGCCTACATCAAGAAGAGGGACGGATGTGCGCGA AGCTCACCAAGCGTGGAATGCCTGACGTGCGCACACAGCCTCCGTTCATG ATTATTTCACCACACGCCACACGGCTTCTGCTCGTGGGCTGTGCGAGTGA TGCACTGCCTCGTGGCTGTTCAGTTGTTTGGCGTGCACCCTCTGCCTACA CCGCGTGATTCGATGGCTTCGCGTTTCATGGTCCTCTCCTGAACGACTTT CACCCTCTTCGGCGTTTAAAATATTACTCTTCGCCATCCTCGGACGTCGG GAACGAACAGACCATGCCACCCGGACGCAAGCGGAAGATGCTCTCGAGCA AGCGGGCAACACCAACATGGTAAGTAAGAGTGTGCAGCAACGGCAGCGGC TAGCAGCAGCTGGGGTCGCGGGGGTTCTCACCGCGCCTCTTTTTTCCTTT TTTCGATATATGATAATATCCGCTGGAAGCGCGAAAAAGCCGCACCTGAT TCGGTACAGGGGAGGGATCATGAGCCACTGTGACAACCACCACAAAATAG GGTTAAAGTTCTGTGCCCGTCGTTCCATTGCCCCTCGTCCTGGCATGGTA TGTGGCCTTGCACTTCGAGAGAGATACGCACCGCTGCCGTTTTGCGGTTG GGTCGCAGCCGCTTTCACCCTTTTCGCTCGGATTTGCGGCATGGCATAGG CAGGGAGGATGCAGACGCCGCTGCCGACCTCTCTTCAACCGCTGGGTTTC GCCACAAAACTGGGGCTGCGAGGCCCCGCTCCCGCGGCACAGAAGCCCCG TGCTGCTGTGGACGTGCTTCAACGCGGAGCACCGTGCGCGCGATGGTTTC TCAGCGCCAGGCAGGGTGCTTGTTACTTTTTTGTCCGCAGGAGCGTGAAG TCTCTGTTGTCCCAAGAGCTTCACCCGGTTTCCCTCCGTGCCGCCACGCA CTCTCTCGTTGCACTGGACACGGTGCGAGGTGCGAGGCAGCCTCGCACGC CTGCCCCAGTCGGGTATTGTTTCCTGCGCGAGCGACACACGAAGCACTTC GAGGTACATGGTTTTAGGACGGAGAACACCAAAACGTTCGAGCACGCCTC TTTTTCTAAGACGCGACGTACCTGCCGGCAGGTCAAGTGAACGGTCAGAC GGCGGCCTCACTTCCTAAAACCAAAGCCTTGAGTTTCGCAGCCCTTGATC AGTCGTCGCCGTGTTTCCACGAATCTAACCGACTGAAAACATGACCCTCA ACGACGCCGATGGCGGCGCCGACGACGAAAAACAGGGGCAGCTGCTGCTC TCGCTGGTGGTGGAGCTCGCGAACGAGCAGCAGAGCGAAGTCATCCGGCA GCAGGCGGGGTTGTACATCAAGGTGCAGCTCAGCGCGGAGGAGGAGACGA TCCGCGCGCATAAGCTGCAGCAGTGGGCGCACCTTGACGACGCCACCAAG GCCCAGATCAAGGCCGGCTCCATGCAGGTCAGTTTTGCGCTTCGCTCGCG CGGCGGACGGCTCACGCTAGCGGCGTGGCCCCGACCCTGCTGTTTTTGGT GGAGAGGATTGGCGTTTTGGATCGTCTTTCGATCGTGCGCATCCCGACTT GTGTGAGGCTGAAAAGTTTGTAAGTACGAGTTGCAGAGCGTTTGCGTTTC GTTTTTTCATTCGCGCTCTCTGTTGCTGTTACTCGTCTTCTTTTTGCTTT TTCTTCTTTGCATTCGCGCTCTATATTGCTGTTCCTTGTTTTTTTTTTTG TTCGTTTTTTTATTTGCGCTTTCTGCTGCTGTTGGTCCCCTTCTTTCCTT TTCTTTTTCCCCACTACTGTTGTTGCGGGGAGTCCCCGTGCTGTGTACTC GTAGTCAACGACAGTGGCGATCGAGAGCGCTGTCCAGATTCGCGCTTCAC ACGACATCACGACGCACCAGCCTCCATCCTCCACCGTCCCTTCTGCACGC TGCACGCATCACGTGTTTCGTGCTGCCGACTCCTCCCTTCCTCTCTGACG CGGACGTTTCACTGCAAGTACTTCTCTCGCTTTCCCCCTTGACCAATTTT TGCGCTTGTGCTGCGTGGCTTGCGTGACTGCTGTTCGTTTGCAGACCCTG CACTCACCCGTTGCTGGGCCGAGATCCACGGCGGCTCTGATCGTGGGGAA GATGGGTGCGATCGAGCTGCCTCAGGTCAGTAACGCTGAGCATTCCAAGC CTTCCTGGGCAGGGAGGGGAAGCGTTCACTGGTTCGTGGGGAGCAAGACG CACACGCTTGCAAATTTGCCAGGCTAGGACAGAAAGCGACGCGTCTACCC TCAAAGAGATCCTGCTCACTAGCGTAAGGCGTCAGCGTGGCCCTTGGAAC CGCTGCTTACCTATTCAGGCATGAGGAGATGAGGAGGACACGCGCAGTTC TGCTGTCTTCTCTGTGTTGTCTCGGAAGACCATGTCTCCCTCTCCTCCTC TGTCTCCCCTCCCCCCGCCCCCTAGTACAACACCTTTTCTGCCTGCCATG ATGCCAAGCTGATGTCTTGCTTCCCCGATGCCATTGTATCGCGACCGGTG GTGCCCTCTCTCTGTCTCGCTTTCTCTCTCCCGTTAAACCCCCTCCTCCT CGAGGCACCGCGTCTAGATCGCGCTACACCATGCCATGTATCGCCGCATC TGTCCCTGACAACGCAAATTTGCTGTCGTCGTTCATTCGCGTCGGGCCAG GACAAGTGGCCGGAGCTGTTGCCCACCTTGCTGGGGAACGTCACCGGGGA GTTCGAGGAGAGGGTTAAGGTGGCCACGCTGCAGGCGCTGGGCTACATGT GCGACGACGTGAGTGGTGGTCCTCGCGCTCGCCCACCTGCTCCGCTATGT CGCACGCACGACTTGATCGCGCTTCTATGCAGAACGGATGCTGCTGTAGT CGGTAAAGGGTCTAGGTGGATACTGGAAAGCCCTCGGCAAGATATGGCGA AGCAATCAGTTCATTCGTGCGGTTTGTTGGCAAGACCTACCAGATATGCT GTCAAGAGCGTGCCGGAGAAAGCGTAGCGGCTCTCTCGTTGCTTTTGGCA CGAGGCGAGCCGCGGGTGTCGGGGCGGCGAGCGACGGGTCGTTCGTGGTT CGAACGGCGAACGCTATCTGTTGCCTGGTGGCACGTGTGCCGACTGGTTT TTCTCGAGTTGGATCGAGGCGGCTGTCCGCGGGTTGTCGGTATCACGCCG CAGCTCTGAAAGGAGATAGTTGGCAGACGGCGATGCCCAAAACTATGTAG GGGTGCCCTCCATTCAAGCCGCCTTGAACAACATAAGTCAGAGGCTTGTG AAGAAGAAGAGTCGACGTGAAAGTGACGGACCGTCTTTCATCCCCAATCC GCTTCTGTCGCATGCATCGTAAGAACCGCAAGAAGTTCTTGGTGCGCTGC TCGTCTCCGTTCCCGTCAAGATACCACTGTGTTTGCGTCTTGATTGCATG GTATTGTGCCTTGTTAGATTTCTCAAGACCCTTCGCCATGGCTATTTTCG TTGATGTCGTAGAGTTCCCTGGAAAAAAAATGAGGGATGTATTATGCCGA ACACGGCGCTCTGTATGACGCAGCCGTGCGAGCCGAGGGTACGTGTGCGC GACCGACGTTCTTCTAGCAGTGTCGCGCCGTAGTTGTCTTATCTCAAGCG CACATTCCGTGCATCTGAGGGTCGTCATGCCCTGAACACACGTTTTTTTA TGTCACGAGAGCAGCACTGCAGGAGAAAACTTGACGACTCACACGCTTGT CCCCGCCGTGAGCCTTTCCCTCACACGCCGGTGGTGGTACCGCGCAAGTG CGGGCTGATTTGACGTCTCTCCCGAACCATCGGACTCCGCCGCCGCCGCC GCCGCCGTCGCAGTGGGAGCCGGAGGACATGAACGAGAGCCAGTCGAACC AGATCCTGACCTGCATCGTTGACGGCATGAGGTCCGACAGGCCACCGGCC ATCCGCGGCGCGGCCGCAAGGGCCCTCATCAACTCGCTCGACTTCACCCG CAGCAACTTCGAGACCCAGCAGGAGCGGGACGTCATCATGCAGGTTAGCT GGCGCACGTGTCTGTGCTCGTTGTAAACCCGGCCGTGAGAGCGCGCGGTT TGGTTGGTGCGACCGCGGGCATGAACTGCGGGTTGACGGGTGATGTTGCA TGTTGGGGATGGCGGTTGTGGTTGTGGTGGAGGTGGTGATGTACGGAGTT GGCAGCGTTTTCGTTGGCCTTCAACTGGGCAGCCGCGCCGCTCCAATTTC CCTCTTCTCTCTTGGCTTTCTGGCGCCGGGCCTCGACGCTGTTGTTCCCT GCGCATCGGTTCATAGTGGTATCCCCTTGTCTCAAGTTTCGTAGCGTTGC GACGGCTTCACCCCCCCCCCCTCCTCCAACGCCAATTTACCGCCGTCGCC AGTTGCACTCTTTTTTTTTTGCCGAATAGCGACGTTTAATAAAGCCGCGG TTGCTGACCCCCGCCAACGTGGCCTTGATCGTTGCAGGTGGTGTGTGAGG CGACGCAGTGTACGGATGCCAACGTTCGGAAAGCGGCGTACGAGGCCATC TGGACGATCGCGACGCTCTACTACGACCGCCTGCAGGCGTACATGCAGCC CCTCTTCGAGCTCACCCTGCGGACCATCCGAGAAGACCAGGAGGACGTGG CCCTCAACGCCATGGAGTTCTGGAGCAGCCTGTGCGATGAGGAGGTGAGT CGTCCCCTTGTTGCTGTTGTTGCTGGTGCTGCCTGTGCTTTTTTAGAAGA AAAGATCAACACAACAACACCAAAGGAATATCCCCCGCTGAGACAAAACG AAAAGTCTGTGCTCTTTTGTTTCGATCTTTTTCGCTGGTCGCCTCGTTGT TTTCCACCATACCCCATGGTTGGACGTGTTTTCTGGCGTCTCGCTATGAT TGGCGGAACGTAACTTTCGCCCCTCTTGATGCAAAGGGTTAGCCTTTTTT TTCCCGGCCTAAATCCTCCCGTATCAAGACCATGAGTGTGTCAATCACGA CGCTTGCCACGGGCAGATGCCCCTCCTCTCCCCTCCGGGTTTTTTCCGGG CGGGTTGGAGACAACCCGAGACCGAAAGCGAGGTTAATATTTTTGGAGAC AAGGCAGATGCTAGCCTTCCCCCCCCCCCCATTAATCTACGACCCCTTTT TTCGGCCTGGCACGTGTCCATGATGTAATGTTGGCAGCTCGAGATCATGG ACGAGAACGCCTTCGAGAGGGAACCGGGAACGGCCAGGGTGTCTCAGAAC TACGTCAAGGCAGCGTTGGCATCGTTGATGCCTGTCGTGTTGGAGACGCT GTCTAAGCAGGACGAGGACAGCGCTGACGACCTTGAGCACTGGGATCTTG GTGAGTCG
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1476:20821..26378+

>mRNA_H-canaliculatus_F_contig1476.3619.1 ID=mRNA_H-canaliculatus_F_contig1476.3619.1|Name=mRNA_H-canaliculatus_F_contig1476.3619.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2076bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1476:20821..26378+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGACCTCGTGACGCTATTGGGCAACTGTCAGAATCCGGATGGACCTCG
TGACGCTATTGGGCAACTGTCAGAATCCGGACCATGCCACCCGGACGCAA
GCGGAAGATGCTCTCGAGCAAGCGGGCAACACCAACATGACCATGCCACC
CGGACGCAAGCGGAAGATGCTCTCGAGCAAGCGGGCAACACCAACATGGG
GCAGCTGCTGCTCTCGCTGGTGGTGGAGCTCGCGAACGAGCAGCAGAGCG
AAGTCATCCGGCAGCAGGCGGGGTTGTACATCAAGGTGCAGCTCAGCGCG
GAGGAGGAGACGATCCGCGCGCATAAGCTGCAGCAGTGGGCGCACCTTGA
CGACGCCACCAAGGCCCAGATCAAGGCCGGCTCCATGCAGGGGCAGCTGC
TGCTCTCGCTGGTGGTGGAGCTCGCGAACGAGCAGCAGAGCGAAGTCATC
CGGCAGCAGGCGGGGTTGTACATCAAGGTGCAGCTCAGCGCGGAGGAGGA
GACGATCCGCGCGCATAAGCTGCAGCAGTGGGCGCACCTTGACGACGCCA
CCAAGGCCCAGATCAAGGCCGGCTCCATGCAGACCCTGCACTCACCCGTT
GCTGGGCCGAGATCCACGGCGGCTCTGATCGTGGGGAAGATGGGTGCGAT
CGAGCTGCCTCAGACCCTGCACTCACCCGTTGCTGGGCCGAGATCCACGG
CGGCTCTGATCGTGGGGAAGATGGGTGCGATCGAGCTGCCTCAGGACAAG
TGGCCGGAGCTGTTGCCCACCTTGCTGGGGAACGTCACCGGGGAGTTCGA
GGAGAGGGTTAAGGTGGCCACGCTGCAGGCGCTGGGCTACATGTGCGACG
ACGACAAGTGGCCGGAGCTGTTGCCCACCTTGCTGGGGAACGTCACCGGG
GAGTTCGAGGAGAGGGTTAAGGTGGCCACGCTGCAGGCGCTGGGCTACAT
GTGCGACGACTGGGAGCCGGAGGACATGAACGAGAGCCAGTCGAACCAGA
TCCTGACCTGCATCGTTGACGGCATGAGGTCCGACAGGCCACCGGCCATC
CGCGGCGCGGCCGCAAGGGCCCTCATCAACTCGCTCGACTTCACCCGCAG
CAACTTCGAGACCCAGCAGGAGCGGGACGTCATCATGCAGTGGGAGCCGG
AGGACATGAACGAGAGCCAGTCGAACCAGATCCTGACCTGCATCGTTGAC
GGCATGAGGTCCGACAGGCCACCGGCCATCCGCGGCGCGGCCGCAAGGGC
CCTCATCAACTCGCTCGACTTCACCCGCAGCAACTTCGAGACCCAGCAGG
AGCGGGACGTCATCATGCAGGTGGTGTGTGAGGCGACGCAGTGTACGGAT
GCCAACGTTCGGAAAGCGGCGTACGAGGCCATCTGGACGATCGCGACGCT
CTACTACGACCGCCTGCAGGCGTACATGCAGCCCCTCTTCGAGCTCACCC
TGCGGACCATCCGAGAAGACCAGGAGGACGTGGCCCTCAACGCCATGGAG
TTCTGGAGCAGCCTGTGCGATGAGGAGGTGGTGTGTGAGGCGACGCAGTG
TACGGATGCCAACGTTCGGAAAGCGGCGTACGAGGCCATCTGGACGATCG
CGACGCTCTACTACGACCGCCTGCAGGCGTACATGCAGCCCCTCTTCGAG
CTCACCCTGCGGACCATCCGAGAAGACCAGGAGGACGTGGCCCTCAACGC
CATGGAGTTCTGGAGCAGCCTGTGCGATGAGGAGCTCGAGATCATGGACG
AGAACGCCTTCGAGAGGGAACCGGGAACGGCCAGGGTGTCTCAGAACTAC
GTCAAGGCAGCGTTGGCATCGTTGATGCCTGTCGTGTTGGAGACGCTGTC
TAAGCAGGACGAGGACAGCGCTGACGACCTTGAGCACTGGGATCTTGGTG
AGTCGCTCGAGATCATGGACGAGAACGCCTTCGAGAGGGAACCGGGAACG
GCCAGGGTGTCTCAGAACTACGTCAAGGCAGCGTTGGCATCGTTGATGCC
TGTCGTGTTGGAGACGCTGTCTAAGCAGGACGAGGACAGCGCTGACGACC
TTGAGCACTGGGATCTTGGTGAGTCG
back to top