mRNA_H-canaliculatus_F_contig1474.3610.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1474.3610.1 vs. uniprot
Match: D8LEK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK8_ECTSI) HSP 1 Score: 209 bits (533), Expect = 2.140e-56 Identity = 142/389 (36.50%), Postives = 206/389 (52.96%), Query Frame = 3
Query: 3 GVALFVLVFAAIFLSVAAGSILIFFRERNAFEIKARSAYLVMLTGLAFIGVILNITISRVDLLFDYDENVYVAKTVKYFVVVCSTFCYGSRTIRLAMLFSPKARKAAPWLLPERNHVAVCILLGLASMSVPLYDMTIVNEGPDDKEDFVDMAERHLWIISVACQAVVIALNPLAWLVEDIFNLGRELRVMAVVQFLEILGGALVSGNGT-DGTRWLDAEKLLFIRSIVMFSVSVIHPVRMRLFHPMQSSDPKVVKTLEKRKSAGATAGPSFSFRDWSRSQTSASLASRSSAMNSRRFSWYRRDSDVSSTGSAHFADGAFHEGDVENGGVGGGIVPAAPDTSSTITVSANDSPGSWTYERVMFMPAVASVFEEFSRKALCHESFLFLKDV 1166
G+A F+LV ++ L V G + + + R+ FEI+ARSA LVML G + + + + + ++F+ N+Y + +F++VC + CYGSRTIRLA+LFS R+ PWL ERNHV +C++LG S+ PLY M V +GP + F + A LW +S+A QA+V++L PL W +DIFN+ RELRV+ V+ F L G + + D RW++ + FI + V+F +S+ P+R +F P++SSDP+V + L KR+ GP S T+ SS GS E GV +T+ + WTYE+V MP+V+ F EFSRKALC ES FLKDV
Sbjct: 58 GIAWFLLVVSSGLLVVMTGVMFLLIKNRHVFEIRARSACLVMLLGASTMTALAMNMVGQSVVIFNALPNLYTFFMLYFFILVCGSCCYGSRTIRLAVLFSTGTRRVVPWLASERNHVCMCLVLGAGSLGFPLYVMYDVGDGPFAELLFAERAGVLLWRVSIASQAMVLSLYPLVWKTDDIFNISRELRVVIVLTFSTTLIGHFGDNHSSEDVARWVNTRIMGFISATVIFFLSLGLPIRQLVFDPLESSDPRVSRALAKRRQGRL--GPE--------STTTPCC--------------------TSSAGS-------------EFSGV------------NTLAL--------WTYEKVEAMPSVSVAFHEFSRKALCQESIFFLKDV 383
BLAST of mRNA_H-canaliculatus_F_contig1474.3610.1 vs. uniprot
Match: D7G2T7_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2T7_ECTSI) HSP 1 Score: 158 bits (399), Expect = 2.440e-37 Identity = 136/548 (24.82%), Postives = 249/548 (45.44%), Query Frame = 3
Query: 108 RSAYLVMLTGLAFIGVILNITISRVDLLFDYDENVYVAKTVKYFVVVCSTFCYGSRTIRLAMLFSPKARKAAPWLLPERNHVAVCILLGLASMSVPLY-DMTIVNEGPDDKEDFVDMAERHLWIISVACQAVVIALNPLAWLVEDIFNLGRELRVMAV-VQFLEILGGALVSGNGTDGTRWLDAEKLLFIRSIVMFSVSVIHPVRMRLFHPMQSSD---------PKVVKTLEKRKSAGATAGPSFSFRDWSRSQTSASLASRSSAMNSRRFSWYRRDSDVSSTGSAHFADGAFHEGDVEN----GGVGGGIVPAAP-DTSSTI---------------------TVSANDSPGS------------------------------------WTYERVMFMPAVASVFEEFSRKALCHESFLFLKDVAAYQDQIFKD---EGLKASDSDDDHKGGGREGQGGAEQEAHFLSFSHIIREYIVDGAPNEINISSRDKGSILDVYNSGKQGFSALTAKGKRLIFVRAYSEIRFLLERNLMIKFTSTQRFKEA 1523
RSA+LVM+ G+ + ++ +++++D + + + +F+ Y R +RLA++F P+A++A PWL+PERN++ V +++ + M++P+Y + T+ K+ + E ++ +++AC + P V+D+FN+ +EL ++ V + L ++ A G RW+ +FI + V+F +S++ P+R P+ ++ + R ++G ++G S RD SR + ++ +R + D+ G D GDV N VG G++ + DT+ + +VS + S G W +ER+ P +A FE++S++ALCHES LFL +V+ YQ + + + +++S S F +F +I +I G+P E+NIS DK IL++Y G++ F + + +RLIF RAY E++ +LE NL+ +F +T RFK
Sbjct: 3 RSAHLVMVEGVCVLLTMVVAVNGSINVVWDSGLDWFWMSLLLFFISPALKGSYICRALRLAVVFHPRAKRALPWLIPERNYMVVLLVVSVGMMAIPIYQEYTLEVWEIIPKQTTILTTEALVFAVTLAC------IYPFIRNVDDLFNISKELLLVTVAIVCLAVVQKAAAEWGGVYEQRWVGNNISIFIAA-VLFGISIVDPLRRLAMDPLAATKRNYADRVLLSRTAPDSTVRTASGVSSGRS---RDPSRIRANSEEEAR------------LEEGDL---GGVLDKDETTTAGDVSNVVASAVVGNGVITTSTADTNDAVAAGTWNEREPINTSVFTKQSSSVSNDTSIGGNRRDVVQRGPRERAFFRGRRGGGGGRGRPEREEMEVWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRYQHEDYATPTKDAIRSSPS-------------------QFGTFCYITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNEEERRLIFGRAYLEVKSMLEANLLRRFLNTDRFKSV 506
BLAST of mRNA_H-canaliculatus_F_contig1474.3610.1 vs. uniprot
Match: D7FTW0_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW0_ECTSI) HSP 1 Score: 156 bits (394), Expect = 7.940e-37 Identity = 131/490 (26.73%), Postives = 230/490 (46.94%), Query Frame = 3
Query: 72 FFRERNAFEIKARSAYLVMLTGLAFIGVILNITISRVDLLFDYDENVYVAKTVKYFVVVCSTFCYGSRTIRLAMLFSPKARKAAPWLLPERNHVAVCILLGLASMSVPLY-DMTIVNEGPDDKEDFVDMAERHLWIISVACQAVVIALNPLAWLVEDIFNLGRELRVM-AVVQFLEILGGALVSGNGTDGTRWLDAEKLLFIRSIVMFSVSVIHPVRMRLFHPMQSSDPKVVKTLEKRKSAGATAGPSFSFRDWSRSQTSASLASRSS--AMNSRRFSWYRRDSDVSSTGSAHFADGA----FHEGDVENGGVGGGIVPAAPDTSSTITVSANDSPGSWTYERVMFMPAVASVFEEFSRKALCHESFLFLKDVAAYQDQIFKDEGLKASDSDDDHKGGGREGQGGAEQEAHFLSFSHIIREYIVDGAPNEINISSRDKGSILDVYNSGKQGFSALTAKGKRLIFVRAYSEIRFLLERNLMIKFTSTQRFK 1517
F+R + +I+ RSAYLVM+ G+A I +L +++D + + +F+ Y R +RLA++F P+ ++A PWL+PERN++ V ++ + +++P+Y + T+ K+ + E + +++AC + P V+D+F++ EL ++ A + + I+ G RWL A L + IV+F VS++ P+R RL +SDP F R+ + L + ++ R RR S G DG H+ D++ W +ER++ P +A FE++S++ALCHESFLFL +V+ YQ+ + ++AS G+ F +F +I +I G+P E+NIS +++ IL +Y+ G++ F + +R+IF RAY ++ +LE NL+++F +T RFK
Sbjct: 74 FYRLKQILDIRTRSAYLVMVGGVAGILTMLVTVNDATTVIWDTGFDWFWTSLFLFFISPALFGRYICRALRLAVVFHPRVKRALPWLIPERNYMVVLLVASVGMLAIPIYHEHTLGVWDAISKQTTILKIEARVLAVALAC------IYPFIRNVDDLFSISTELIIVTATIGLITIVQEIDGLWGGCYERRWL-ANNLSVLFMIVLFGVSIVAPLR-RL-----ASDP---------------------FAATRRNYANRVLPDHTEPHSIGGNRLDAVRRGQ--SERGDDRGRDGGRRSRSHKQDIDL----------------------------WDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATT-IRASS--------------GSSFPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNDAERRMIFRRAYLAVKRMLEANLLLRFLNTDRFK 484
BLAST of mRNA_H-canaliculatus_F_contig1474.3610.1 vs. uniprot
Match: A0A6H5JE98_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE98_9PHAE) HSP 1 Score: 155 bits (393), Expect = 4.220e-36 Identity = 139/552 (25.18%), Postives = 248/552 (44.93%), Query Frame = 3
Query: 72 FFRERNAFEIKARSAYLVMLTGLAFIGVILNITISRVDLLFDYDENVYVAKTVKYFVVVCSTFCYGSRTIRLAMLFSPKARKAAPWLLPERNHVAVCILLGLASMSVPLY-DMTIVNEGPDDKEDFVDMAERHLWIISVACQAVVIALNPLAWLVEDIFNLGRELRVMAVVQFLEILGGALVSGNGTDGTRWLDAEKLLFIRS------IVMFSVSVIHPVRMRLFHPMQSSDPKVV-KTLEKRKSAGATAGPSFSFRDWSRSQTSASLASRSSAMNSRRFSWYRRD---------SDVSST----GSAHFADGAFHEGDV---ENGGVGGGIVPAA-----PDTSSTIT-----VSANDSPGS----------------------------------WTYERVMFMPAVASVFEEFSRKALCHESFLFLKDVAAYQDQIFKDEGLKASDSDDDHKGGGREGQGGAEQEAHFLSFSHIIREYIVDGAPNEINISSRDKGSILDVYNSGKQGFSALTAKGKRLIFVRAYSEIRFLLERNLMIKFTSTQRFKEA 1523
F+R + +I+ RSAYLVM+ G+A I +L +++D + + + +F+ Y R +RLA++F P+ ++A PWL+PE N++ V ++ + +++P+Y + T+ K+ + E + +++AC + P V+D+F++ EL ++ L++ DG W E+ F + I++F VS+I P+R P+ ++ + L R +TA + F S+ L SS M S R + + +++T GSA + + G + G + P P SS +T VS ++ G W +ER++ P +A FE++S+KALCHESFLFL +V+ YQ+ + +AS G+ F +F +I +I G+P E+NIS +++ IL +Y+ G++ F + + +R+IF RAY ++ +LE NL+++F +T RFK
Sbjct: 74 FYRSKWILDIRTRSAYLVMVGGVAGILTMLVTVNDSTTVVWDIGFDWFWISLLLFFISPALFGSYICRALRLAVVFHPRVKRALPWLIPEHNYMVVLLVASVGMLAIPIYHEYTLGVWDAISKQTNILKIEARVLAVALAC------IYPFIRNVDDLFSISTELIIVTATI-------VLITSEEVDGQWWGPYERRWFANNMSVVFMIILFGVSIIAPLRRLASDPLAATRHNYANRVLPNRTEPHSTARRASGF--------SSGLDCESSMMCSEREDETTLEEGKLGEALATGITTTEREGGSAGYVAASATIGKAVTTSSADANGAVAPHTWTDREPTNSSVVTTATWFVSNDNGAGGNRLDGVRRGQSEIGLDRGRDGGRRSRSHKQDIDIWDFERIVRTPLLAVAFEDYSKKALCHESFLFLSEVSRYQNGDYA-MATRASS--------------GSSCPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNEEERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSV 589
BLAST of mRNA_H-canaliculatus_F_contig1474.3610.1 vs. uniprot
Match: D7G2T8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T8_ECTSI) HSP 1 Score: 154 bits (388), Expect = 2.000e-35 Identity = 140/554 (25.27%), Postives = 243/554 (43.86%), Query Frame = 3
Query: 72 FFRERNAFEIKARSAYLVMLTGLAFIGVILNITISRVDLLFDYDENVYVAKTVKYFVVVCSTFCYGSRTIRLAMLFSPKARKAAPWLLPERNHVAVCILLGLASMSVPLY-DMTIVNEGPDDKEDFVDMAERHLWIISVACQAVVIALNPLAWLVEDIFNLGRELRVMAV-VQFLEILGGALVSGNGTDGTRWLDAE-KLLFIRSIVMFSVSVIHPVRMRLFHPMQSSDPKVVKTLEKRKSAGATAGPSFSFRDWSRSQTSASLASRSSAMNSRRFSWYRRDSD---------------VSSTGSAHFADGAFHEGDVENGGVGGGIVPA--------APDT----------SSTITVSANDSPGS----------------------------------WTYERVMFMPAVASVFEEFSRKALCHESFLFLKDVAAYQDQIFKDEGLKASDSDDDHKGGGREGQGGAEQEAHFLSFSHIIREYIVDGAPNEINISSRDKGSILDVYNSGKQGFSALTAKGKRLIFVRAYSEIRFLLERNLMIKFTSTQRFKEA 1523
F+R R +I+ RSA+LV L G++ + +L +++D + + + +FV Y R +RLA++F+P+A+ A PWL+PERN++AV +L + +++P+Y + T+ K+ + A+ + + + C + P V+D+FN+ EL + V + + I+ + G RWL + ++F+ V+F +S++ P+R P+ ++ KR A R S S SAS S A S R DSD + +T +A G+ + + VG G++ AP T ST + S G W +ER+ P +A+ FE++S++ALCHES LFL +V+ YQ+ + A F +F +I +I GAP E+NIS +D+ IL++Y G++ F + + +R++F R+Y E++ +LE NL+ +F +T +FK
Sbjct: 85 FYRSRWILDIRTRSAHLVTLQGVSLLLSMLVTVNGATTIVWDSGLDWFWISLLLFFVSPALFGSYICRALRLAVVFNPRAKSALPWLIPERNYLAVLLLASIGILAIPIYHEYTLEVWDAIPKQTSILKAQARVLAVMLVC------IYPFIRNVDDLFNISTELITVTVTIVVVTIVQEVVDKWGGNFEQRWLTSNISVVFVA--VLFCISIVAPLRRLALDPLAAT---------KRNYADRV----LLSRTESHSTRSASGISPERAGRSSRIV---DDSDDEVAFEDEELGGVPGMDTTAAAGVGGGSTGKVATSSAVVGSGVITTSTADANVVAPRTWKGREMTIANGSTSVPKGSGSTGKRRDAVQRGQRGRGXXXXXXXXXXXXPSDREEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTNAAGTCP-----------------TQFGTFCYITDTFIKAGAPEEVNISDKDRKLILELYQKGEESFEEVNEEERRMVFKRSYLEVKSMLEANLLRRFLNTDQFKSV 597
BLAST of mRNA_H-canaliculatus_F_contig1474.3610.1 vs. uniprot
Match: A0A6H5L7K1_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7K1_9PHAE) HSP 1 Score: 122 bits (306), Expect = 1.080e-25 Identity = 116/492 (23.58%), Postives = 191/492 (38.82%), Query Frame = 3
Query: 264 YGSRTIRLAMLFSPKARKAAPWLLPERNHVAVCILLGLASMSVPLY-DMTIVNEGPDDKEDFVDMAERHLWIISVACQAVVIALNPLAWLVEDIFNLGRELRVMAVVQFLEILGGALVSGNGTDGTRWLDAEKLLFIRSIVMFSVSVIHPVRMRLFHPMQSSDPKVVKTLEKRKSAGATAGPSFSFRDWSRSQTSASLASRSSAMNSRRFSWYRRDSDVSSTGSAHFADGAFHEGDVENGGVGGGIVPAAP-----------------DTSSTITVSANDSPG--------------------------------------------SWTYERVMFMPAVASVFEEFSRKALCHESFLFLKDVAAYQDQIFKDEGLKASDSDDDHKGGGREGQGGAEQEAHFLSFSHIIREYIVDGAPNEINISSRDKGSILDVYNSGKQGFSALTAKGKRLIFVRAYSEIRFLLERNLMIKFTSTQRFKEALADDRKRQNQ 1553
Y R +RLA++F P+A++A PWL+PERNH+ +A + VP+Y DMT+ W V+D+FN+ REL ++ ++ + +G + G + W FI + V F VSV+ P+R+ P+ S + + + + S+S + +A + S A+ S +G + +G EN G P D +S + SPG +W +ER+ P VA+ FE ++RKALCHE LFL++V+ YQ F + G + + +F I +I G+ E++IS ++ ++++ + G F A T + +RL+F RAY E++ +LE NL+ +F T RFK A R Q +
Sbjct: 48 YICRALRLAVIFHPRAKQALPWLIPERNHLFFLSATVVAFLIVPIYQDMTLE-----------------------------------VWKVDDLFNISRELIIVTILFLILAIG--IKCGLYYEVDMWTGGNLNFFITAAV-FGVSVVGPLRLLAVDPLAGSKQRCMDRAVLARRDTRSEDVSYSAK------ATADIRGSSRAVR---------------VASRKLEEGLYGDGVDENDDDGCDTTPXXXXXXXXXXXXXXXATSLYDEPPPANLSPSPSPGDPGAGNWQYQGINFCTSRGGGAGXXXXXXXXXXXXXXXXEEMVEAWDFERLARKPLVAAAFEAYTRKALCHECVLFLREVSRYQSGDFPE-------------------PAGLSGPSQYQAFCRINDVFIRPGSREEVSISGVERKRLMELAHKGDVLFEAGTEEERRLVFARAYLEVKTMLEDNLLRRFLQTDRFKSVRAQRRMMQRE 461
BLAST of mRNA_H-canaliculatus_F_contig1474.3610.1 vs. uniprot
Match: A0A6H5KGT8_9PHAE (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGT8_9PHAE) HSP 1 Score: 120 bits (300), Expect = 3.210e-25 Identity = 84/255 (32.94%), Postives = 134/255 (52.55%), Query Frame = 3
Query: 63 ILIFFRERNAFEIKARSAYLVMLTGLAFI---GVILNITISRVDLLFDYDENVYVAKTVKYFVVVCSTFCYGSRTIRLAMLFSPKARKAAPWLLPERNHVAVCILLGLASMSVPLY-DMTIVNEGPDDKEDFVDMAERHLWIISVACQAVVIALNPLAWLVEDIFNLGRELRVMAVVQFLEILGGALVSGNGTDGT--RWLDAEKLLFIRSIVMFSVSVIHPVRMRLFHPM-QSSDPKVVKTLEKRKSAGATAGP 806
+++FFR R+ FEI+ARS YLV GL + G+ +++ +LF N + + +FV CY SR IRLA+ F PK R++ P L+ E+ +AV + +G+ S+S+P+Y +T+ NE D+ D W+ ++ Q I L P+ W ++D+F++ REL V+ V+ ++ + L G +++ + + V+F +SVI PVR F PM QSS P L R SA T P
Sbjct: 8 LVLFFRARDVFEIRARSVYLVTTLGLLLLLYEGITVDL---HAIVLFGTPANYFTNNLLVFFVTFSIASCYISRVIRLAVGFHPKLRRSMPKLMSEKLLIAVSLSIGVMSLSIPIYYKITVPNE------DYRDHQAGVKWLCTLVLQITQICLLPVVWYIDDLFHISRELMVIIVLGLIQSVFVKLFIEEELTGEIRNFINPPNMQLLTISVLFGLSVIDPVRRLKFSPMAQSSAPMTRAVL--RSSASKTQKP 251
BLAST of mRNA_H-canaliculatus_F_contig1474.3610.1 vs. uniprot
Match: D7G2T5_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T5_ECTSI) HSP 1 Score: 111 bits (277), Expect = 2.560e-23 Identity = 56/154 (36.36%), Postives = 88/154 (57.14%), Query Frame = 3
Query: 1062 WTYERVMFMPAVASVFEEFSRKALCHESFLFLKDVAAYQDQIFKDEGLKASDSDDDHKGGGREGQGGAEQEAHFLSFSHIIREYIVDGAPNEINISSRDKGSILDVYNSGKQGFSALTAKGKRLIFVRAYSEIRFLLERNLMIKFTSTQRFKEA 1523
W +ER+ P +A+ FE++S++ALCHES LFL +V+ YQ + +S+S F +F +I +I G+P E+NIS DK +ILDVY+ G++ F + + +R+IF AY E++ +LE NL+ +F +T RFK
Sbjct: 120 WNFERLARTPLLAAAFEDYSKRALCHESVLFLSEVSRYQSDDYATSARPSSESS---------------CPTQFGTFCYITDTFIKGGSPEEVNISDADKKAILDVYHKGEESFGGVNEEDRRMIFSPAYLEVKSMLEANLLRRFLNTDRFKSV 258
BLAST of mRNA_H-canaliculatus_F_contig1474.3610.1 vs. uniprot
Match: A0A6H5LEP9_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEP9_9PHAE) HSP 1 Score: 115 bits (288), Expect = 3.940e-23 Identity = 132/560 (23.57%), Postives = 231/560 (41.25%), Query Frame = 3
Query: 105 ARSAYLVMLTGLAFIGVILNITISRVDLLFDYDENVYVAKTVKYFVVVCSTFCYGSRTIRLAMLFSPKARKAAPWLLPERNHVAVCILLGLASMSVPLY-DMTIVNEGPDDKEDFVDMAERHLWIISVACQAVVIALNPLAWLVEDIFNLGRELRVMAVVQFLEILGGALVSGNGTDGTRWLDAEKLLFIRSIVMFSVSVIH--PVRMRLFHPMQSSD---PKVVKTLEKRKSAGATAGPSFSFRDWSRSQTSASLASRSSAMNSRRFSWYRRDSDVSSTGSAHFADGAFHEGDVEN--------------GGVGGG----IVPAAPDTSSTITVSANDSPGS---------------------------------------------------------------WTYERVMFMPAVASVFEEFSRKALCHESFLFLKDVAAYQDQIFKDEGLKASDSDDDHKGGGREGQGGAEQEAHFLSFSHIIREYIVDGAPNEINISSRDKGSILDVYNSGKQGFSALTAKGKRLIFVRAYSEIRFLLERNLMIKFTSTQRFKEA 1523
ARSA+LV L G++ + +L +++D + + + +FV Y R +RLA++F+P+A++A PWL+PERN++AV +L + +++P+Y + T+ K+ + + + + + C + P V+D+FN+ +EL + V T +A + RS + S H P R +PM S+ VV L +R + A ++ D L SR+ + ++R S S + GS+ D + E E+ GVGGG + +A S IT S+ D+ G+ W +ER+ P +A+ FE++S++ALCHES LFL +V+ YQ+ + A+ + F +F I +I GAP E+NI + IL++Y G++ F + + +R++F R+Y ++ +LE NL+ +F +T +FK
Sbjct: 18 ARSAHLVTLQGVSLLFSMLVTVNDATTIVWDSGLDWFWISLLLFFVSPALFGSYICRALRLAVVFNPRAKRALPWLIPERNYLAVLLLASIGILAIPIYQEYTLEVWDAIPKQTSILKTQARVLAVMLVC------IYPFIRNVDDLFNISKELITVTV----------------TIAVVTCEAHSFVH-RSTHVESCLQQHVPPTTKRFPYPMSPSNLSTRSVVAPL-RRLALDPLAATKRNYAD-------RVLLSRTESHSTRSASGI---SPERAGGSSRIVDDSEDEVAFEDEELGGVPGFDTTAAAGVGGGSTGKVATSAVVGSGVITTSSADANGAVAPCPWKGRELTIANGSTSVPKGSSSTGKRRDAVQRGQRGRGXXXXXXXXXXXXXSDREEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTNAAAGT----------------CPTQFGTFCFITDTFIKAGAPEEVNI----RKLILELYQKGEESFEEVNEEERRMVFKRSYLAVKSMLEANLLRRFLNTDQFKSV 523
BLAST of mRNA_H-canaliculatus_F_contig1474.3610.1 vs. uniprot
Match: D7FTW2_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW2_ECTSI) HSP 1 Score: 100 bits (250), Expect = 3.990e-19 Identity = 52/152 (34.21%), Postives = 89/152 (58.55%), Query Frame = 3
Query: 1062 WTYERVMFMPAVASVFEEFSRKALCHESFLFLKDVAAYQDQIFKDEGLKASDSDDDHKGGGREGQGGAEQEAHFLSFSHIIREYIVDGAPNEINISSRDKGSILDVYNSGKQGFSALTAKGKRLIFVRAYSEIRFLLERNLMIKFTSTQRFK 1517
W +ER++ P +A FE++S++ALCHESFLFL +V+ YQ+ + +S G+ F +F +I +I G+ E+NIS +++ IL +Y+ G++ F + + +R+IF RAY ++ +LE NL+++F +T RFK
Sbjct: 209 WDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATTKRASS---------------GSSFPTQFGTFCYITDTFIKAGSHEEVNISDKERKLILALYHKGEELFEDVNVEERRMIFRRAYLAVKRMLEANLLLRFLNTDRFK 345 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1474.3610.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1474.3610.1 >prot_H-canaliculatus_F_contig1474.3610.1 ID=prot_H-canaliculatus_F_contig1474.3610.1|Name=mRNA_H-canaliculatus_F_contig1474.3610.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=480bp MLTGLAFIGVILNITISRVDLLFDYDENVYVAKTVKYFVVVCSTFCYGSRback to top mRNA from alignment at H-canaliculatus_F_contig1474:7684..17950- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1474.3610.1 ID=mRNA_H-canaliculatus_F_contig1474.3610.1|Name=mRNA_H-canaliculatus_F_contig1474.3610.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=10267bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1474:7684..17950- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1474:7684..17950- >mRNA_H-canaliculatus_F_contig1474.3610.1 ID=mRNA_H-canaliculatus_F_contig1474.3610.1|Name=mRNA_H-canaliculatus_F_contig1474.3610.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2880bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1474:7684..17950- (Hapterophycus canaliculatus Oshoro5f female)back to top |