mRNA_H-canaliculatus_F_contig14630.3564.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14630.3564.1 vs. uniprot
Match: A0A6H5K2P5_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2P5_9PHAE) HSP 1 Score: 289 bits (739), Expect = 1.600e-87 Identity = 141/157 (89.81%), Postives = 149/157 (94.90%), Query Frame = 1
Query: 4 QGMSEVIDPASLSVLSARELQRLVGGEGAGSGADEEWSYGKIMASVVCRHGYTVDSSQVKWLATVMSELDPGGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTSKSALEAKLKHAITEGQDHFALD 474
+G+SEV+DP++LSVLSA ELQRL+ GEG GSGADEEW YG IMASVVCRHGYTVDSSQVKWLA VMSELD GRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTS++ALEAKLKHAITEGQDHFALD
Sbjct: 2202 KGVSEVMDPSTLSVLSAGELQRLISGEGTGSGADEEWEYGTIMASVVCRHGYTVDSSQVKWLARVMSELDTEGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTSRAALEAKLKHAITEGQDHFALD 2358
BLAST of mRNA_H-canaliculatus_F_contig14630.3564.1 vs. uniprot
Match: D7G4E7_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E7_ECTSI) HSP 1 Score: 181 bits (459), Expect = 1.150e-56 Identity = 87/92 (94.57%), Postives = 90/92 (97.83%), Query Frame = 1
Query: 199 MSELDPGGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTSKSALEAKLKHAITEGQDHFALD 474
MS+LD GRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTS++ALEAKLKHAITEGQDHFALD
Sbjct: 1 MSDLDTEGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTSRAALEAKLKHAITEGQDHFALD 92
BLAST of mRNA_H-canaliculatus_F_contig14630.3564.1 vs. uniprot
Match: A0A835Z7D6_9STRA (HECT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7D6_9STRA) HSP 1 Score: 179 bits (453), Expect = 1.490e-52 Identity = 91/157 (57.96%), Postives = 110/157 (70.06%), Query Frame = 1
Query: 4 QGMSEVIDPASLSVLSARELQRLVGGEGAGSGADEEWSYGKIMASVVCRHGYTVDSSQVKWLATVMSELDPGGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTSKSALEAKLKHAITEGQDHFALD 474
+G++EV+ +L V + RELQ ++G A E W G I +VVCRHGYT +SSQV L V+SELD RR FL FVTG+PRLP+GGF AL+PRLTVV+K+ PD HLPSCSTCQVYLKLPAYT K+ L AKL AI EG++HFALD
Sbjct: 187 RGVAEVLGAGALRVFAPRELQAMLGXXXXXXXAAEHWRTGAIAGAVVCRHGYTAESSQVAALVEVLSELDAAQRRAFLSFVTGSPRLPLGGFAALQPRLTVVRKDTP-----RPDEHLPSCSTCQVYLKLPAYTCKAVLRAKLLQAINEGREHFALD 338
BLAST of mRNA_H-canaliculatus_F_contig14630.3564.1 vs. uniprot
Match: A0A7S1CCF7_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CCF7_9STRA) HSP 1 Score: 155 bits (392), Expect = 7.880e-41 Identity = 83/157 (52.87%), Postives = 105/157 (66.88%), Query Frame = 1
Query: 1 RQGMSEVIDPASLSVLSARELQRLVGGEGAGSGADEEWSYGKIMASVVCRHGYTVDSSQVKWLATVMSELDPGGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTSKSALEAKLKHAITEGQDHFAL 471
R G++ V DPA L + S ELQ L G + SGADEEW+ ++ ++ C HGYT S V+ L V+S+LDP RRQFL F TG+PRLP+GGF AL PRLT+V+K+ LPG +PD+ LPS STC YLKLP YTSK + +L AIT+G F L
Sbjct: 1968 RAGIATVFDPALLDLFSPDELQVLFCGA-SDSGADEEWTVPALLGAIRCDHGYTTSSGAVQMLVEVLSDLDPVLRRQFLLFTTGSPRLPVGGFNALLPRLTIVQKKP--LPGRSPDASLPSASTCTNYLKLPQYTSKEIMHERLVRAITDGAGAFHL 2121
BLAST of mRNA_H-canaliculatus_F_contig14630.3564.1 vs. uniprot
Match: A0A2R5GSN0_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GSN0_9STRA) HSP 1 Score: 154 bits (389), Expect = 2.020e-40 Identity = 82/160 (51.25%), Postives = 105/160 (65.62%), Query Frame = 1
Query: 1 RQGMSEVIDPASLSVLSARELQRLV--GGEGAGSGADEEWSYGKIMASVVCRHGYTVDSSQVKWLATVMSELDPGGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTSKSALEAKLKHAITEGQDHFALD 474
R+G+S +L V S ELQ L+ G +GA W IMA++VC+HGY + Q++ L V+SELD RR F++F+TG+PRLP+GGFG LRPRLTVV+K V PD LPSCSTCQVYLKLP Y+S+ L+ +L A+ EGQ HFALD
Sbjct: 2645 REGISAFFPVEALQVFSPHELQSLLSDGDDGA------NWDAEVIMANIVCKHGYDARARQIRDLVHVLSELDGSDRRLFMQFLTGSPRLPVGGFGELRPRLTVVRKNV----ADDPDGILPSCSTCQVYLKLPPYSSREVLKRRLLQAVREGQGHFALD 2794
BLAST of mRNA_H-canaliculatus_F_contig14630.3564.1 vs. uniprot
Match: A0A512UA59_9ASCO (HECT-type E3 ubiquitin transferase n=1 Tax=Metschnikowia sp. JCM 33374 TaxID=2562755 RepID=A0A512UA59_9ASCO) HSP 1 Score: 132 bits (332), Expect = 9.170e-33 Identity = 71/157 (45.22%), Postives = 96/157 (61.15%), Query Frame = 1
Query: 1 RQGMSEVIDPASLSVLSARELQRLVGGEGAGSGADEEWSYGKIMASVVCRHGYTVDSSQVKWLATVMSELDPGGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTSKSALEAKLKHAITEGQDHFAL 471
R+G S V SLS+ +A+EL+ + G +E+WS I S+ HGY DS + L VM +L RR+FL+F+TG+PRLPIGGF A+RP TVV+K D G + D +LPS TC YLKLP YTS++ +++KL HA+ EG F L
Sbjct: 1444 REGFSSVFPIESLSIFTAKELKDIFGS------GEEDWSRETISESIKANHGYAQDSRAISMLVNVMQDLSISERREFLQFLTGSPRLPIGGFKAMRPEFTVVRKHPDA--GLSGDDYLPSVMTCANYLKLPDYTSETLMKSKLLHAMREGAGAFHL 1592
BLAST of mRNA_H-canaliculatus_F_contig14630.3564.1 vs. uniprot
Match: A0A7S1KQA3_9EUKA (HECT-type E3 ubiquitin transferase n=1 Tax=Percolomonas cosmopolitus TaxID=63605 RepID=A0A7S1KQA3_9EUKA) HSP 1 Score: 131 bits (330), Expect = 1.700e-32 Identity = 69/157 (43.95%), Postives = 97/157 (61.78%), Query Frame = 1
Query: 1 RQGMSEVIDPASLSVLSARELQRLVGGEGAGSGADEEWSYGKIMASVVCRHGYTVDSSQVKWLATVMSELDPGGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTSKSALEAKLKHAITEGQDHFAL 471
R+G S ++ P +L + S EL+ L GE D++W+ G + ++VC HGYT +S + L V+++ D RR F+RFVTG+PRLP+GG L P+LTVV+K DS+LPSC TC YLKLP+Y+S L+ +L+ AI EGQ F L
Sbjct: 1406 REGFSALVHPKNLFLFSHGELETLFAGE------DKKWTEGMLKKAIVCDHGYTPESQTIVHLMHVLTQFDQPQRRAFVRFVTGSPRLPVGGLQKLNPKLTVVRKSTG---DAGADSYLPSCMTCTHYLKLPSYSSVGVLKEQLEKAIREGQGAFHL 1553
BLAST of mRNA_H-canaliculatus_F_contig14630.3564.1 vs. uniprot
Match: A0A6A6V4Y1_9PLEO (HECT-type E3 ubiquitin transferase n=1 Tax=Sporormia fimetaria CBS 119925 TaxID=1340428 RepID=A0A6A6V4Y1_9PLEO) HSP 1 Score: 131 bits (330), Expect = 1.720e-32 Identity = 74/157 (47.13%), Postives = 93/157 (59.24%), Query Frame = 1
Query: 1 RQGMSEVIDPASLSVLSARELQRLVGGEGAGSGADEEWSYGKIMASVVCRHGYTVDSSQVKWLATVMSELDPGGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTSKSALEAKLKHAITEGQDHFAL 471
R G S+V +SL + EL L G +DE+W+ +M S+ HGY +DS V+ L VMSEL P RR+FL+F+TG+P+LPIGGF L P TVV + + P TPD +LPS TCQ YLKLP Y+S L KL AI EGQ F L
Sbjct: 1724 RDGFSQVFPYSSLKAFTPEELVTLFGK------SDEDWTLATLMESIKADHGYNLDSKSVRNLLQVMSELSPTERREFLQFITGSPKLPIGGFSKLTPMFTVVCRPSE--PPLTPDDYLPSVMTCQNYLKLPDYSSIGVLREKLNVAIKEGQGAFHL 1872
BLAST of mRNA_H-canaliculatus_F_contig14630.3564.1 vs. uniprot
Match: UPI001D804E1E (uncharacterized protein n=1 Tax=Ogataea philodendri TaxID=1378263 RepID=UPI001D804E1E) HSP 1 Score: 131 bits (329), Expect = 2.320e-32 Identity = 70/156 (44.87%), Postives = 99/156 (63.46%), Query Frame = 1
Query: 4 QGMSEVIDPASLSVLSARELQRLVGGEGAGSGADEEWSYGKIMASVVCRHGYTVDSSQVKWLATVMSELDPGGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTSKSALEAKLKHAITEGQDHFAL 471
+G S V +S+++ S+ EL RL+G +E+WSY +M++V HGYT +S+ V+ L +MSE RR+FL+F+TG+P+LP+GGF AL P LTVV K + G PD +LPS TC YLKLP Y+SK + +L A+TEG + F L
Sbjct: 1445 EGFSAVFPYSSMTIFSSGELVRLLGN------GEEDWSYDTLMSAVHADHGYTTESASVQRLLEIMSEFSSDERRKFLQFLTGSPKLPVGGFKALSPDLTVVLKHSE--DGLQPDDYLPSVMTCANYLKLPDYSSKKVMRKRLITAMTEGANSFLL 1592
BLAST of mRNA_H-canaliculatus_F_contig14630.3564.1 vs. uniprot
Match: F2QMM1_KOMPC (HECT-type E3 ubiquitin transferase n=3 Tax=Komagataella TaxID=460517 RepID=F2QMM1_KOMPC) HSP 1 Score: 130 bits (327), Expect = 4.330e-32 Identity = 71/155 (45.81%), Postives = 97/155 (62.58%), Query Frame = 1
Query: 7 GMSEVIDPASLSVLSARELQRLVGGEGAGSGADEEWSYGKIMASVVCRHGYTVDSSQVKWLATVMSELDPGGRRQFLRFVTGTPRLPIGGFGALRPRLTVVKKEVDVLPGGTPDSHLPSCSTCQVYLKLPAYTSKSALEAKLKHAITEGQDHFAL 471
G S V +SL + SA EL +L G + E+WSY +MASV HGY+++S+ V+ L +MSE +R FL+F+TG+PRLPIGGF L+P+LTVV+K + G PD++LPS TC YLKLP YT+K + ++ AI EG F L
Sbjct: 1520 GFSTVFPYSSLLIFSASELVKLFGN------SSEDWSYDTVMASVHADHGYSIESAAVQNLIQLMSEFTKDEQRMFLQFLTGSPRLPIGGFKELKPQLTVVRKTTE--DGLLPDNYLPSVMTCANYLKLPNYTNKEIMRQRIMQAIKEGAGAFLL 1666 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14630.3564.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14630.3564.1 >prot_H-canaliculatus_F_contig14630.3564.1 ID=prot_H-canaliculatus_F_contig14630.3564.1|Name=mRNA_H-canaliculatus_F_contig14630.3564.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=156bp MSEVIDPASLSVLSARELQRLVGGEGAGSGADEEWSYGKIMASVVCRHGYback to top mRNA from alignment at H-canaliculatus_F_contig14630:1114..2297- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14630.3564.1 ID=mRNA_H-canaliculatus_F_contig14630.3564.1|Name=mRNA_H-canaliculatus_F_contig14630.3564.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1184bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14630:1114..2297- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14630:1114..2297- >mRNA_H-canaliculatus_F_contig14630.3564.1 ID=mRNA_H-canaliculatus_F_contig14630.3564.1|Name=mRNA_H-canaliculatus_F_contig14630.3564.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=936bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14630:1114..2297- (Hapterophycus canaliculatus Oshoro5f female)back to top |