mRNA_H-canaliculatus_F_contig1462.3555.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1462.3555.1
Unique NamemRNA_H-canaliculatus_F_contig1462.3555.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1462.3555.1 vs. uniprot
Match: A0A6H5JAT5_9PHAE (MinC_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAT5_9PHAE)

HSP 1 Score: 341 bits (875), Expect = 3.210e-105
Identity = 271/527 (51.42%), Postives = 295/527 (55.98%), Query Frame = 2 
Query:   89 RAWARQEKRRLRLAPTEYHLPWLKSTATIGDSNS-SGVSYRYLASSXXXXXXXXX------KARSYLERWAGIRGGIAASGERSGSASKLALGAPSPSTPTPPISFFGRTYLLSTVKVPPFPAGAP--AKSTEVSRQTNGAAAEAGRQEWKAEGEEEEEEKRAFEWMRGALQAPGALGTTGFFPGAGSPVVLDLGAVSQDGSPHGRPAGRASLAGAARAVRAAGLVPVGVCNTSHDVLRTASEQGLPEVMMVQARPRSSHQQSSAPVTAKTLRTTEPSAARRPSVGPSASSAERSSVSVEEPRSEGSAPGAAAVPRGREGEDAPPVRLPRAAAAAADLPSSSTAEKVVGSPSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVTTNERDSSCEGFGT-LGDNSGDRETMVYQGSVRSGQQVFAEGTSLVVLXXXXXXXXXXXDGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGVGDTFTTLDDPESLAGLV 1639
            RAW RQ              PWL S A I +S+    VS+R   S XXXXXXXXX      + RSYLERWAGIRG  A    RS  A       PSPST TPP+S FGRTYLLST+KVPP PA       ST  SR+ NGAAA          G E++EE+R F+WMR ALQ PGALGTTG FPGAGSPVVLDLGAVSQDGSPHGRPAGRASLAG +RAVRAAGLVPVGV N SHDVL+TASEQGLPE+MMV ARPRSS                           P   +A RS+                   R    E   PVR   AA + A +P S+         SAP                                                                 +  EG GT L +   DRETMVYQGSVRSGQQVFAEGTSL   XXXXXXXXXXX GDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGVG++FTTLD PE+LAGLV
Sbjct:   14 RAWIRQPP------------PWLTSAAGIDESSVLRRVSWRTSTSXXXXXXXXXXXXXXXERRRSYLERWAGIRGSPAPPASRSAEA-------PSPSTRTPPVSLFGRTYLLSTIKVPPIPAATTPTGSSTANSRRVNGAAA----------GGEKDEEERVFQWMREALQGPGALGTTGLFPGAGSPVVLDLGAVSQDGSPHGRPAGRASLAGCSRAVRAAGLVPVGVSNASHDVLKTASEQGLPELMMVHARPRSS---------------------------PPQVAASRST-------------------RNHSVEQTVPVRASDAAESVAQMPPSAAPSGA----SAPAPSTTAASGEGEEGRRKGGSPCSGAAPAPA-----------------------------------TDSEGSGTSLSEEGSDRETMVYQGSVRSGQQVFAEGTSLXXXXXXXXXXXXXXXGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGVGESFTTLDSPENLAGLV 426
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BLAST of mRNA_H-canaliculatus_F_contig1462.3555.1 vs. uniprot
Match: D7FZC7_ECTSI (MinC_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZC7_ECTSI)

HSP 1 Score: 271 bits (694), Expect = 1.140e-80
Identity = 199/361 (55.12%), Postives = 212/361 (58.73%), Query Frame = 2 
Query:  560 MRGALQAPGALGTTGFFPGAGSPVVLDLGAVSQDGSPHGRPAGRASLAGAARAVRAAGLVPVGVCNTSHDVLRTASEQGLPEVMMVQARPRSSHQQSSAPVTAKTLRTTEPSAARRPSVGPSASSAERSSVSVEEPRSEGSAPGAAAVPRGREGEDAPPVRLPRAAAAAADLPSSSTAEKVVGSPSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVTTNERDSSCEGFGT-LGDNSGDRETMVYQGSVRSGQQVFAEGTSLVVLXXXXXXXXXXXDGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGVGDTFTTLDDPESLAGLV 1639
            MR ALQ PG LGTTG FPGAGSPVVLDLGAVSQDGSPHGRPAGRASLAG +RAVRAAGLVPVGVCN SHDVL+TASEQGLPEVMMV ARPRSS  Q +A       R+T    A +P V   AS A  S V                          PP   P   +A A   +S+  E   G                                                              G    +R+S  E  G+ L +    RETMVYQGSVRSGQQVFAEGTSLVVL XXXXXXXXXXDGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGVG+TFTTLD PESLAGLV
Sbjct:    1 MREALQGPGVLGTTGLFPGAGSPVVLDLGAVSQDGSPHGRPAGRASLAGCSRAVRAAGLVPVGVCNASHDVLKTASEQGLPEVMMVHARPRSSPPQVAA------SRSTRNHGAEQP-VPVRASDAAESVVKT------------------------PPSAAPSGTSAPAPTRTSALGEGEEGR--------------------------------------------RRGGGSCSVVEPAPATTGEQEEDRNSHSERSGSSLSEEESGRETMVYQGSVRSGQQVFAEGTSLVVLGXXXXXXXXXXDGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGVGETFTTLDSPESLAGLV 286
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BLAST of mRNA_H-canaliculatus_F_contig1462.3555.1 vs. uniprot
Match: A0A1V9ZBU1_9STRA (MinC_C domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZBU1_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 1.280e-18
Identity = 46/84 (54.76%), Postives = 62/84 (73.81%), Query Frame = 2 
Query: 1373 MVYQGSVRSGQQVFAEGTSLVVLXXXXXXXXXXXDGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGVGDTFTTLDDPES 1624
            M+ +GSVR+GQQV+A+   L+V+           DGDIHVYGTL+GRALAG+ GN +AK+FA +FDAEL+ + DTFTT D+ E+
Sbjct:  180 MLVEGSVRTGQQVYAKDQGLIVMGSVHSGAEVLADGDIHVYGTLKGRALAGIGGNNNAKVFAQKFDAELISIADTFTTCDELEA 263
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BLAST of mRNA_H-canaliculatus_F_contig1462.3555.1 vs. uniprot
Match: A0A4D9CRC4_9STRA (MinC_C domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRC4_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 2.850e-18
Identity = 52/80 (65.00%), Postives = 59/80 (73.75%), Query Frame = 2 
Query: 1373 MVYQGSVRSGQQVFAEGTSLVVLXXXXXXXXXXXDGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGVGDTFTTLD 1612
            MV +GSVR+GQQV AEGTSLVVL           DGDIH+YG L GRALAGLSG+  AKIFA RF+AELV +G+ FTT D
Sbjct:  243 MVVEGSVRTGQQVVAEGTSLVVLGHVHSGAEVSADGDIHIYGKLTGRALAGLSGHVRAKIFAGRFNAELVAIGEVFTTCD 322
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BLAST of mRNA_H-canaliculatus_F_contig1462.3555.1 vs. uniprot
Match: T0S5F8_SAPDV (Septum site-determining protein MinC n=2 Tax=Saprolegnia TaxID=4769 RepID=T0S5F8_SAPDV)

HSP 1 Score: 96.3 bits (238), Expect = 5.670e-18
Identity = 54/117 (46.15%), Postives = 72/117 (61.54%), Query Frame = 2 
Query: 1364 RETMVYQGSVRSGQQVFAEGTSLVVLXXXXXXXXXXXDGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGVGDTFTTLDDPESLAGLVRRRFDHIPVSERDTQVYGKGIPLVF 1714
            R  MV +GSVR+GQQV+A+   LVVL           DGDIH+YGTL+GRALAG+ GN  AK++  +FDAEL+ + DTFTT D  E+      R   H+ V ++ T V+ +   L F
Sbjct:  193 RGMMVVEGSVRTGQQVYAKDQGLVVLGSVNSGAEVLADGDIHIYGTLKGRALAGIGGNTDAKVYVQKFDAELISIADTFTTCDALEA------REIGHV-VDDKPTIVWLEDGALQF 302
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BLAST of mRNA_H-canaliculatus_F_contig1462.3555.1 vs. uniprot
Match: A0A1V9YDL4_9STRA (MinC_C domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YDL4_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 9.980e-18
Identity = 54/114 (47.37%), Postives = 73/114 (64.04%), Query Frame = 2 
Query: 1373 MVYQGSVRSGQQVFAEGTSLVVLXXXXXXXXXXXDGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGVGDTFTTLDDPESLAGLVRRRFDHIPVSERDTQVYGKGIPLVF 1714
            M+ +GSVR+GQQV+A+   L+V+           DGDIHVYGTL+GRALAG+ GN  AK++A +FDAEL+ + DTFTT D  E+      R   HI VS++ T V+ +   L F
Sbjct:  194 MLVEGSVRTGQQVYAKEQGLIVMGSVNSGAEVLADGDIHVYGTLKGRALAGIGGNVRAKVYAHKFDAELISIADTFTTCDALEA------REVGHI-VSDKPTVVWLEDGALQF 300
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BLAST of mRNA_H-canaliculatus_F_contig1462.3555.1 vs. uniprot
Match: A0A6G0XUR6_9STRA (MinC_C domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XUR6_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.760e-17
Identity = 57/120 (47.50%), Postives = 75/120 (62.50%), Query Frame = 2 
Query: 1376 VYQGSVRSGQQVFAEGTSLVVLXXXXXXXXXXXDGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGVGDTFTTLDDPESLAGLVRRRFDHIPVSERDTQVYGKGIPLVF-SVSEGR 1732
            + + SVR+GQQ++A+G +L+VL           DGDIHVYG L+GRALAG+ GN  AK+FA +FDAEL+ + DTFTT D  E+     R R D   V +R T V+ +   L F SV  GR
Sbjct:  192 IVESSVRTGQQIYAKGQNLIVLGSVNSGAEVLADGDIHVYGVLKGRALAGIGGNTEAKVFAQKFDAELISIADTFTTCDALEA-----RERGD--VVDDRPTVVWLEDGVLQFKSVVPGR 304
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BLAST of mRNA_H-canaliculatus_F_contig1462.3555.1 vs. uniprot
Match: W7TV41_9STRA (Septum site-determining protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TV41_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 6.050e-17
Identity = 51/80 (63.75%), Postives = 57/80 (71.25%), Query Frame = 2 
Query: 1373 MVYQGSVRSGQQVFAEGTSLVVLXXXXXXXXXXXDGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGVGDTFTTLD 1612
            MV QGSVR+GQQV AEGTSLVVL           DGDIH+YG L GRALAGLSG+  A IF  RF+AELV +G+ FTT D
Sbjct:  303 MVVQGSVRTGQQVVAEGTSLVVLGHVHSGAEVSADGDIHIYGKLTGRALAGLSGDVRANIFVGRFNAELVAIGEVFTTCD 382
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BLAST of mRNA_H-canaliculatus_F_contig1462.3555.1 vs. uniprot
Match: UPI00138ECFC0 (septum site-determining protein MinC n=1 Tax=Pseudoxanthomonas suwonensis TaxID=314722 RepID=UPI00138ECFC0)

HSP 1 Score: 83.6 bits (205), Expect = 2.240e-15
Identity = 46/83 (55.42%), Postives = 52/83 (62.65%), Query Frame = 2 
Query: 1388 SVRSGQQVFAEGTSLVVLXXXXXXXXXXXDGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGVGDTFTTLDD-PESLAG 1633
            +VRSGQQV+AEG  L VL           DG IHVYGTLRGRALAG  GN  A+IF   F AELV +   +  LDD PE+L G
Sbjct:   26 AVRSGQQVYAEGCDLTVLHTVGAGAEVISDGSIHVYGTLRGRALAGAQGNTDARIFCREFHAELVAIAGHYKVLDDIPETLRG 108
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1462.3555.1 vs. uniprot
Match: A0A485LKA1_9STRA (Aste57867_21970 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKA1_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 2.500e-15
Identity = 44/88 (50.00%), Postives = 61/88 (69.32%), Query Frame = 2 
Query: 1373 MVYQGSVRSGQQVFAEGTSLVVLXXXXXXXXXXXDGDIHVYGTLRGRALAGLSGNKSAKI----FATRFDAELVGVGDTFTTLDDPES 1624
            MV +GSVR+GQQ++A+G  L+V+           DGDIHVYG L+GRALAG+ G+ +AK+    +A +FDAEL+ + DTFTT D  E+
Sbjct:  198 MVVEGSVRTGQQIYAKGQGLIVMGSVNSGAEVLADGDIHVYGVLKGRALAGIGGHTTAKVRIAVYAQKFDAELISIADTFTTCDALEA 285
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1462.3555.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAT5_9PHAE3.210e-10551.42MinC_C domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FZC7_ECTSI1.140e-8055.12MinC_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A1V9ZBU1_9STRA1.280e-1854.76MinC_C domain-containing protein n=1 Tax=Thraustot... [more]
A0A4D9CRC4_9STRA2.850e-1865.00MinC_C domain-containing protein n=1 Tax=Nannochlo... [more]
T0S5F8_SAPDV5.670e-1846.15Septum site-determining protein MinC n=2 Tax=Sapro... [more]
A0A1V9YDL4_9STRA9.980e-1847.37MinC_C domain-containing protein n=1 Tax=Achlya hy... [more]
A0A6G0XUR6_9STRA1.760e-1747.50MinC_C domain-containing protein n=1 Tax=Aphanomyc... [more]
W7TV41_9STRA6.050e-1763.75Septum site-determining protein n=1 Tax=Nannochlor... [more]
UPI00138ECFC02.240e-1555.42septum site-determining protein MinC n=1 Tax=Pseud... [more]
A0A485LKA1_9STRA2.500e-1550.00Aste57867_21970 protein n=1 Tax=Aphanomyces stella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1462contigH-canaliculatus_F_contig1462:126..5976 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score275.8
Seed ortholog evalue4.8e-71
Seed eggNOG ortholog2880.D7FZC7
EggNOG free text desc.Septum formation inhibitor MinC, C-terminal domain
EggNOG OGs2RYK0@2759,COG0850@1
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionSeptum formation inhibitor MinC
Ec32 orthologEc-07_001750.1
Exons7
Model size2556
Cds size1797
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929211.3308604-UTR-H-canaliculatus_F_contig1462:125..8381622929211.3308604-UTR-H-canaliculatus_F_contig1462:125..838Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1462 126..838 -
1696845719.456779-UTR-H-canaliculatus_F_contig1462:125..8381696845719.456779-UTR-H-canaliculatus_F_contig1462:125..838Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1462 126..838 -
1622929211.4572074-UTR-H-canaliculatus_F_contig1462:5930..59761622929211.4572074-UTR-H-canaliculatus_F_contig1462:5930..5976Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1462 5931..5976 -
1696845719.5388768-UTR-H-canaliculatus_F_contig1462:5930..59761696845719.5388768-UTR-H-canaliculatus_F_contig1462:5930..5976Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1462 5931..5976 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929211.3459373-CDS-H-canaliculatus_F_contig1462:838..11321622929211.3459373-CDS-H-canaliculatus_F_contig1462:838..1132Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1462 839..1132 -
1696845719.4677427-CDS-H-canaliculatus_F_contig1462:838..11321696845719.4677427-CDS-H-canaliculatus_F_contig1462:838..1132Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1462 839..1132 -
1622929211.357058-CDS-H-canaliculatus_F_contig1462:2148..22321622929211.357058-CDS-H-canaliculatus_F_contig1462:2148..2232Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1462 2149..2232 -
1696845719.478795-CDS-H-canaliculatus_F_contig1462:2148..22321696845719.478795-CDS-H-canaliculatus_F_contig1462:2148..2232Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1462 2149..2232 -
1622929211.3720245-CDS-H-canaliculatus_F_contig1462:2619..26761622929211.3720245-CDS-H-canaliculatus_F_contig1462:2619..2676Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1462 2620..2676 -
1696845719.487603-CDS-H-canaliculatus_F_contig1462:2619..26761696845719.487603-CDS-H-canaliculatus_F_contig1462:2619..2676Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1462 2620..2676 -
1622929211.3877716-CDS-H-canaliculatus_F_contig1462:3530..41331622929211.3877716-CDS-H-canaliculatus_F_contig1462:3530..4133Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1462 3531..4133 -
1696845719.4966776-CDS-H-canaliculatus_F_contig1462:3530..41331696845719.4966776-CDS-H-canaliculatus_F_contig1462:3530..4133Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1462 3531..4133 -
1622929211.4019914-CDS-H-canaliculatus_F_contig1462:4395..45421622929211.4019914-CDS-H-canaliculatus_F_contig1462:4395..4542Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1462 4396..4542 -
1696845719.507008-CDS-H-canaliculatus_F_contig1462:4395..45421696845719.507008-CDS-H-canaliculatus_F_contig1462:4395..4542Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1462 4396..4542 -
1622929211.419411-CDS-H-canaliculatus_F_contig1462:4816..51271622929211.419411-CDS-H-canaliculatus_F_contig1462:4816..5127Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1462 4817..5127 -
1696845719.5177639-CDS-H-canaliculatus_F_contig1462:4816..51271696845719.5177639-CDS-H-canaliculatus_F_contig1462:4816..5127Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1462 4817..5127 -
1622929211.4341986-CDS-H-canaliculatus_F_contig1462:5629..59301622929211.4341986-CDS-H-canaliculatus_F_contig1462:5629..5930Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1462 5630..5930 -
1696845719.5283074-CDS-H-canaliculatus_F_contig1462:5629..59301696845719.5283074-CDS-H-canaliculatus_F_contig1462:5629..5930Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1462 5630..5930 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1462.3555.1prot_H-canaliculatus_F_contig1462.3555.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1462 839..5930 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1462.3555.1

>prot_H-canaliculatus_F_contig1462.3555.1 ID=prot_H-canaliculatus_F_contig1462.3555.1|Name=mRNA_H-canaliculatus_F_contig1462.3555.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=599bp
MFRLCSLSSSAGARRAWARQEKRRLRLAPTEYHLPWLKSTATIGDSNSSG
VSYRYLASSSSSSSNSSSKARSYLERWAGIRGGIAASGERSGSASKLALG
APSPSTPTPPISFFGRTYLLSTVKVPPFPAGAPAKSTEVSRQTNGAAAEA
GRQEWKAEGEEEEEEKRAFEWMRGALQAPGALGTTGFFPGAGSPVVLDLG
AVSQDGSPHGRPAGRASLAGAARAVRAAGLVPVGVCNTSHDVLRTASEQG
LPEVMMVQARPRSSHQQSSAPVTAKTLRTTEPSAARRPSVGPSASSAERS
SVSVEEPRSEGSAPGAAAVPRGREGEDAPPVRLPRAAAAAADLPSSSTAE
KVVGSPSAPSPSPPPPSAAESSIPSASCSSAARARGAGAGAGGKDRGSSS
QALVEAGVGASAGEGAGVTTNERDSSCEGFGTLGDNSGDRETMVYQGSVR
SGQQVFAEGTSLVVLGAVSSGGEVMADGDIHVYGTLRGRALAGLSGNKSA
KIFATRFDAELVGVGDTFTTLDDPESLAGLVRRRFDHIPVSERDTQVYGK
GIPLVFSVSEGRAAAGGPPALAPAQIEIARGVEFGQERKRQQHQRNTF*
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mRNA from alignment at H-canaliculatus_F_contig1462:126..5976-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1462.3555.1 ID=mRNA_H-canaliculatus_F_contig1462.3555.1|Name=mRNA_H-canaliculatus_F_contig1462.3555.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5851bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1462:126..5976- (Hapterophycus canaliculatus Oshoro5f female)
CCCACTGCTGCACCTCGGTTTGTGTACTGGCCGTGAAAGCGTCGTCATGT
TCCGATTATGTTCTTTATCGAGTTCTGCAGGCGCACGCAGAGCTTGGGCG
CGACAAGAAAAGCGACGGTTACGTTTAGCACCGACAGAATATCATCTGCC
ATGGTTGAAATCCACAGCGACCATCGGAGATAGCAACAGCAGCGGCGTCT
CCTATCGCTACCTGGCATCCTCGAGTAGCAGCAGCAGTAACAGCAGCTCC
AAGGCAAGAAGCTATCTTGAACGCTGGGCTGGCATCCGCGGTGGAATTGC
AGCATCTGGAGAGAGATCGGGATCTGCATCAAAATTGGCATTGGGAGGTT
GGTTCCCCTGCGCGTTGTTTCTCTCTTTCAAAACTTCCAGGTCGACAGCA
GTGAACAGCAACCAGGCGTAGGGCGCTGTACAGGTGGCAGTTGGCGACCG
CAAAGAAGCAACAGGTTGGAGGACCTTGTGCTGTTGGTTTCCCTCGGGCG
AAAAAGGAAGCTGTGGATATCCACTTGTTCGAACTCAATGTCCTGATCTT
GGAGGGGCAAGAGTACTGCAGGAGATGTGTCCTGCGATAGGATTTGCCCA
GATATGCGAGTGTTCGCAGTGATTTTTTTCAGCACCTGGTAGTGCAGTAG
TAGTCGATACTTCTGTAGTGAGATCTTGTGGCCACCTGATGCACATACAC
ATGGCTACGCGCAAGGTGATTCAGATTACTACCGCATGAACGATTGCCGA
AAGGATATGCCTATCTCCTGCCACCGGCCAGGCGAATGATGCCCCCCCCC
CCCACTCGTTGCTCGCCCGCTCTCACGCCTGTCGTGGCCGCTCCACCAGC
GCCCTCCCCTTCAACGCCAACCCCACCAATCAGCTTTTTCGGGCGCACCT
ACCTGCTTTCGACGGTCAAAGTTCCCCCTTTTCCTGCGGGAGCACCCGCC
AAAAGCACGGAAGTGTCGCGCCAGACTAACGGCGCAGCGGCAGAAGCGGG
ACGGCAGGAATGGAAAGCGGAGGGCGAGGAGGAGGAGGAAGAGAAGCGGG
CTTTCGAGTGGATGAGGGGGGCGCTGCAGGCGCCTGGAGCGCTCGGGACG
ACTGGATTCTTCCCTGGAGCGGGATCGCCGGTGGTGCTTGATCTCGGCGC
TGTGTCTCAGGTACGCCTTCGTAGTTGCGACGCTAGTGCGGGAGCTGAGA
TGGAACGCTACCCATTATTTCGAGCGCGATCGAAGAGTAAGAGGAGGAAC
AATGCGCCGTCTCCCGTGCTCCGGTATCGAGAGATTGTAGTGGCGACTTC
GTCCCATGCGCAGGCCCCGGGCGCGTGGCTTTCTACAGTTACTTTCGTCA
GCAGCAGATTCCCTCTGCTTTGCGATAGCGCTGCATAGGTCATGACTCTC
TAAATTCGCCCTTCCTCCCTGATGCCTGCAACAGGACGGGTCCCCGCACG
GTCGACCAGCGGGGCGCGCCAGCCTCGCGGGCGCCGCGCGCGCGGTAAGG
GCGGCGGGACTCGTGCCGGTAGGCGTTTGCAACACCAGCCACGACGTCTT
GCGGACGGCCTCGGAGCAGGGCTTGCCAGAGGTGCGTGCGTGCTGGGGGG
GCGCAACCAGCGACCTGCTTCTGTAGGTTCGTCGCATGGATCTCCCTCAC
ATACATGATGCACCTCGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTTTGTCGAAACTTGGCACCCAGCTTACGGCATTCCAGCCAC
GCGCTATGCCAGCCAAAGCGCCCTTCCCCCTCCCCCCCGATTTCCCCACG
CCGCACGCGGGCTCGCTCCGCGCCTACACGTCTTCGTCTACAGGTCATGA
TGGTGCAAGCAAGGCCTCGATCGTCCCACCAGCAGTCAAGCGCTCCCGTA
ACCGCGAAGACCCTCCGGACGACGGAACCGTCGGCGGCGCGGCGGCCTTC
TGTTGGTCCTTCTGCTTCTTCTGCCGAACGTTCCTCCGTTTCGGTAGAAG
AACCTCGCTCGGAGGGTTCCGCTCCTGGTGCTGCCGCTGTACCGAGAGGG
CGAGAAGGAGAGGATGCACCTCCTGTACGATTACCGCGAGCTGCTGCTGC
TGCTGCTGATTTGCCGTCGTCATCGACAGCAGAAAAAGTCGTAGGGTCGC
CCTCCGCTCCTTCTCCTTCTCCTCCTCCTCCTTCTGCAGCGGAGAGCAGC
ATTCCATCAGCCTCTTGTTCTAGTGCAGCAAGGGCGCGAGGAGCAGGAGC
AGGGGCCGGGGGGAAGGACAGAGGTAGCAGCAGCCAAGCTCTCGTCGAAG
CAGGAGTAGGAGCATCAGCGGGTGAAGGAGCAGGAGTCACCACGAACGAA
AGAGATAGCAGCTGTGAAGGGTTCGGTACCTTGGGCGACAATTCGGGCGA
CCGAGAGACGATGGTGTACCAAGGTTCCGTCCGCAGCGGGCAACAGGTGG
GCGGTGATGGTGGCCGCGCATTTGTTTTTGGGCGGTTTTGCTCGATTGTC
ATGGTTGGTGCTGGTGTTTCGTCGATGTCCTAGTTGCTATTGTTGTAGCT
GCTGCTGCCGTTCTTGCGTTTCTTGTCGCTGGTGTTATCCATTTTTTCGC
CACTTTGTCCGTCTCGTTGGACGCGGTTGATGCATTTCCTTCCAGGAGAT
CATGTGGCCGCTCATGCCCGGGCGTGTCCTTTTTCACGAACAGCCGAAGG
GCAGCATGGTCAGTTACCAGTCTTCGCGTGAGCCTTCTGATATTGCCCGT
GTAGCGAACGTTAAGGGTGATCCTGGGCAGATACCTTCTCTTCGTCCTCC
AGCCATACGAGCTGGCGAGTCTCCTTTTACAGTGCTGCCCCGCTCATAAG
AAACTCAATCAGAAGAAAGCGAGGCTCAGGTTTACGATAAACGGGGGTTC
CGTGGCGAGTGCCACACTAAATCCTTTATTACTACGATAAGAAACCCAGG
CTCGGCTAAAATTTCAGTTCCTTATGATCAAGCCGCTACTGTATGCAAAG
TTGGCAACGATACATTCCCTGACGCTGCACTATGTTCGACCGGTGGCAAT
ATAAGGGCATCGATGGTTCACCCTTAACCCCGAGCCTCATCAACGAATCC
CCACATCCACCGAACTTTCAAGCAGCGCTTTCACTTTGCCCCTTCTTCCT
TGTGCACCCACCCCGCTGCGTTTGCTCCCCAACCCCGCCCGTCCCACCTT
CCCCCGTCGCCAGCGTCCGCATGCCGTCTCCCCTTCTCAGCAGCTTGACC
CCTTCCCACTCAAATCTATCAACGCCTCCTCGTTTCTTGTGGTTGCGCAG
GTGTTTGCGGAAGGTACTTCGCTTGTTGTCTTGGGCGCTGTCAGCTCGGG
GGGCGAGGTGGGTAGCCGCACGCACGCAAGGGCGGGGGGGGAGGGGGGGA
GCGGCGTGTCACAGGGCAGGAGGGCGTAGGCTTGAGAACTGAAACAGCCT
GTGGACCACACGAACGTAATCGTCGTTGGTGGGTAAGAGCTCGTCTCTGA
TTGGACGGCTCCACCTGTTCCGCCTGTCCCGCAAGAGATGAGGCTGGGTA
AAAAACGGAGTGTTTCCCCCCGTCACCCTCTGTACCACGCACATGATACA
AAGCTACAACCTCTATCCGCTACCGTGTGTAGTGTGTATACAAGCAAACG
GGCAAGCAGGCTGGCAAGCCTCGCACGAAGTCAAGTGTGTACGCATGTTT
CTGACCTATGGGGTATGTACGCGACCTTTTTTGTCGTCCGACAGGTGATG
GCGGACGGAGACATACACGTGTACGGCACGCTGAGGGGCCGGGCCTTGGC
CGGTCTCTCGGGCAACAAGTCCGCGAAGGTAATGATGTATGTTGTGGCTG
TGCAGTTTCTTGCCCTATCTCGTCCTGCCTTGTTTTTCCTTGTCTTCACG
GCGTGGAAGCGGAGCTAGCTGTCGTTGTTGATCGTTACGCTAGCCCCTCA
TCGCCAGCACTTAGACGGTGGTCACGAGATGTCGTGACCCGGGAAAATCT
AGGGAAGACAAGAAAGTGGGAGGGAGGAGACACTTCTAGGTGATGTGCCA
TCAACTGAACTACCGCACCCGGAGGAATACATGTGGATCGCAGCATCTTG
TTTCGCCTCCCCTCCCCGCCGCCGGGCACTCATAGCTCCAAGCTATAAGG
CAGTTGCTCTCTGGAGTGCAACTTCAAACGGGCGAAACACACGGGAGCTG
GGGAATAGGAGTAGGAGAACAGACTTCGAGGTCTGCGAGAACCCTTTGTG
ACAACCTTACAGCTCTGTTGTTAATTTGCTTCTACCGGTTGGCGGGCGGA
ACTTTCGCTGCAAGCGTTAATGATCATGAGATACGAGGCCCACCTCAGAG
GTTCTTCCTTTCCTGTTTTCGAGCTTGGGGTCACCGCAATAGTCTGGAGT
GGTGCCAGCATAACCACCCGCAGCAAACGAAATAAAATAATCAGCGGAAG
CTGCCGCGCCGTTTGGCGAACATCAGAGCATTTTTCGAGTCAGCTTTGGT
ATCATGGTCGCAGCGAAGACGTCACGGTGCTCGTCATTGAAGGGGTATCG
TTCTTCGATAGAGTGTAACGACCCAAGTGGGGTCGCTTAGCTGACGCAGG
GAGCGAAGCGGTGTGTCTTGGTGCTAGGCGGGCTGGCGCGGCTTCGCGGT
GGCAGGCGTTATCGGTAGCGCCACAACAGCGTGTTGCACCAGCACACCCG
CACGCACGCATGTAACCCAGCAGTTGCAGCTGCTCGGGCGGTGGCCAGGG
CAGGCTTGTCCGACACCGCGTTCGCCTCTTGTACTGCTCGGCTCTGCTGC
TGAATTTCGCCGCCCTGTGTCTCGTCCTTTTGTGCCTTTCGCAGATTTTC
GCGACGAGATTCGACGCGGAGCTGGTGGGCGTCGGCGACACGTTCACTAC
GCTCGACGACCCGGAGAGCCTGGCAGGTCTGGTGAGACGACGCTTCGATC
ACATTCCCGTGTCCGAAAGAGATACACAGGTGTATGGTAAAGGTATTCCG
TTGGTGTTCAGTGTTTCCGAGGGGCGTGCGGCAGCAGGAGGGCCACCAGC
ACTAGCACCGGCGCAAATCGAAATAGCACGAGGAGTCGAGTTTGGGCAGG
AAAGAAAGAGGCAGCAACACCAAAGGAACACATTCTGAGCTGCTTCTCAG
CAGGCGTCTCAGGAGGCTTGTGTTGAATCCTGTACAGTGAGAGTTTGTGT
TGGATGGGACTTCAACACAGGGAGAAGGGCGTGGGACTCGGTAGGGTGAA
ACGTGCAGGGATTGGGGTGACATGGACGTGGTTGAAGGTAAAACAATAAT
GTGAAGACTGAGATTGTTGATGCATTTATCCTGGCTTTTATGCTTACAGT
GATGAATCGCCAGGTGATCGGGTTCACTTGGCGACTGCTCAGGTACTTGG
CGATCCAGCTCTCGAACGCGTGTCAGCACTAGAGCAGATACAAGAAGTGG
ATGGCAGCCACGAAGAAATCGCGCGTCCGGCGTTTTCAGGCCATAGCGTA
GCCCTGGGCACTCCTCCGGAAAGCAGCGGCGGAGCACGTCGAAGCTTCAC
AGATTAGCAAGAAGGAGTTTGCGTCGGATATAGCCATTCAGAGAGCACGA
GCGAATGTAGGGTCCGGTCATTGGGCGTGTTCGCGATGAAGGAGGGTCGC
TCCGCGCCAATACGCCCCATGCCGCGCTACAAATACATCGCACCGCGTCA
TAACGCCGCGCTCTCATCCTCACTAGCGCTCTCATCCTCACACTTTTTTA
AAAGGAAAAAATAACGACACTGAGGCTTCTGCTAAGCTCCAAACAATGAG
GGTTCATTTGATGTGTGAGGCTGGAACAAAATCGTGAACGGCAAAAGGGG
C
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1462:126..5976-

>mRNA_H-canaliculatus_F_contig1462.3555.1 ID=mRNA_H-canaliculatus_F_contig1462.3555.1|Name=mRNA_H-canaliculatus_F_contig1462.3555.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3594bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1462:126..5976- (Hapterophycus canaliculatus Oshoro5f female)
ATGTTCCGATTATGTTCTTTATCGAGTTCTGCAGGCGCACGCAGAGCTTG
GGCGCGACAAGAAAAGCGACGGTTACGTTTAGCACCGACAGAATATCATC
TGCCATGGTTGAAATCCACAGCGACCATCGGAGATAGCAACAGCAGCGGC
GTCTCCTATCGCTACCTGGCATCCTCGAGTAGCAGCAGCAGTAACAGCAG
CTCCAAGGCAAGAAGCTATCTTGAACGCTGGGCTGGCATCCGCGGTGGAA
TTGCAGCATCTGGAGAGAGATCGGGATCTGCATCAAAATTGGCATTGGGA
GATGTTCCGATTATGTTCTTTATCGAGTTCTGCAGGCGCACGCAGAGCTT
GGGCGCGACAAGAAAAGCGACGGTTACGTTTAGCACCGACAGAATATCAT
CTGCCATGGTTGAAATCCACAGCGACCATCGGAGATAGCAACAGCAGCGG
CGTCTCCTATCGCTACCTGGCATCCTCGAGTAGCAGCAGCAGTAACAGCA
GCTCCAAGGCAAGAAGCTATCTTGAACGCTGGGCTGGCATCCGCGGTGGA
ATTGCAGCATCTGGAGAGAGATCGGGATCTGCATCAAAATTGGCATTGGG
AGCGCCCTCCCCTTCAACGCCAACCCCACCAATCAGCTTTTTCGGGCGCA
CCTACCTGCTTTCGACGGTCAAAGTTCCCCCTTTTCCTGCGGGAGCACCC
GCCAAAAGCACGGAAGTGTCGCGCCAGACTAACGGCGCAGCGGCAGAAGC
GGGACGGCAGGAATGGAAAGCGGAGGGCGAGGAGGAGGAGGAAGAGAAGC
GGGCTTTCGAGTGGATGAGGGGGGCGCTGCAGGCGCCTGGAGCGCTCGGG
ACGACTGGATTCTTCCCTGGAGCGGGATCGCCGGTGGTGCTTGATCTCGG
CGCTGTGTCTCAGCGCCCTCCCCTTCAACGCCAACCCCACCAATCAGCTT
TTTCGGGCGCACCTACCTGCTTTCGACGGTCAAAGTTCCCCCTTTTCCTG
CGGGAGCACCCGCCAAAAGCACGGAAGTGTCGCGCCAGACTAACGGCGCA
GCGGCAGAAGCGGGACGGCAGGAATGGAAAGCGGAGGGCGAGGAGGAGGA
GGAAGAGAAGCGGGCTTTCGAGTGGATGAGGGGGGCGCTGCAGGCGCCTG
GAGCGCTCGGGACGACTGGATTCTTCCCTGGAGCGGGATCGCCGGTGGTG
CTTGATCTCGGCGCTGTGTCTCAGGACGGGTCCCCGCACGGTCGACCAGC
GGGGCGCGCCAGCCTCGCGGGCGCCGCGCGCGCGGTAAGGGCGGCGGGAC
TCGTGCCGGTAGGCGTTTGCAACACCAGCCACGACGTCTTGCGGACGGCC
TCGGAGCAGGGCTTGCCAGAGGACGGGTCCCCGCACGGTCGACCAGCGGG
GCGCGCCAGCCTCGCGGGCGCCGCGCGCGCGGTAAGGGCGGCGGGACTCG
TGCCGGTAGGCGTTTGCAACACCAGCCACGACGTCTTGCGGACGGCCTCG
GAGCAGGGCTTGCCAGAGGTCATGATGGTGCAAGCAAGGCCTCGATCGTC
CCACCAGCAGTCAAGCGCTCCCGTAACCGCGAAGACCCTCCGGACGACGG
AACCGTCGGCGGCGCGGCGGCCTTCTGTTGGTCCTTCTGCTTCTTCTGCC
GAACGTTCCTCCGTTTCGGTAGAAGAACCTCGCTCGGAGGGTTCCGCTCC
TGGTGCTGCCGCTGTACCGAGAGGGCGAGAAGGAGAGGATGCACCTCCTG
TACGATTACCGCGAGCTGCTGCTGCTGCTGCTGATTTGCCGTCGTCATCG
ACAGCAGAAAAAGTCGTAGGGTCGCCCTCCGCTCCTTCTCCTTCTCCTCC
TCCTCCTTCTGCAGCGGAGAGCAGCATTCCATCAGCCTCTTGTTCTAGTG
CAGCAAGGGCGCGAGGAGCAGGAGCAGGGGCCGGGGGGAAGGACAGAGGT
AGCAGCAGCCAAGCTCTCGTCGAAGCAGGAGTAGGAGCATCAGCGGGTGA
AGGAGCAGGAGTCACCACGAACGAAAGAGATAGCAGCTGTGAAGGGTTCG
GTACCTTGGGCGACAATTCGGGCGACCGAGAGACGATGGTGTACCAAGGT
TCCGTCCGCAGCGGGCAACAGGTCATGATGGTGCAAGCAAGGCCTCGATC
GTCCCACCAGCAGTCAAGCGCTCCCGTAACCGCGAAGACCCTCCGGACGA
CGGAACCGTCGGCGGCGCGGCGGCCTTCTGTTGGTCCTTCTGCTTCTTCT
GCCGAACGTTCCTCCGTTTCGGTAGAAGAACCTCGCTCGGAGGGTTCCGC
TCCTGGTGCTGCCGCTGTACCGAGAGGGCGAGAAGGAGAGGATGCACCTC
CTGTACGATTACCGCGAGCTGCTGCTGCTGCTGCTGATTTGCCGTCGTCA
TCGACAGCAGAAAAAGTCGTAGGGTCGCCCTCCGCTCCTTCTCCTTCTCC
TCCTCCTCCTTCTGCAGCGGAGAGCAGCATTCCATCAGCCTCTTGTTCTA
GTGCAGCAAGGGCGCGAGGAGCAGGAGCAGGGGCCGGGGGGAAGGACAGA
GGTAGCAGCAGCCAAGCTCTCGTCGAAGCAGGAGTAGGAGCATCAGCGGG
TGAAGGAGCAGGAGTCACCACGAACGAAAGAGATAGCAGCTGTGAAGGGT
TCGGTACCTTGGGCGACAATTCGGGCGACCGAGAGACGATGGTGTACCAA
GGTTCCGTCCGCAGCGGGCAACAGGTGTTTGCGGAAGGTACTTCGCTTGT
TGTCTTGGGCGCTGTCAGCTCGGGGGGCGAGGTGTTTGCGGAAGGTACTT
CGCTTGTTGTCTTGGGCGCTGTCAGCTCGGGGGGCGAGGTGATGGCGGAC
GGAGACATACACGTGTACGGCACGCTGAGGGGCCGGGCCTTGGCCGGTCT
CTCGGGCAACAAGTCCGCGAAGGTGATGGCGGACGGAGACATACACGTGT
ACGGCACGCTGAGGGGCCGGGCCTTGGCCGGTCTCTCGGGCAACAAGTCC
GCGAAGATTTTCGCGACGAGATTCGACGCGGAGCTGGTGGGCGTCGGCGA
CACGTTCACTACGCTCGACGACCCGGAGAGCCTGGCAGGTCTGGTGAGAC
GACGCTTCGATCACATTCCCGTGTCCGAAAGAGATACACAGGTGTATGGT
AAAGGTATTCCGTTGGTGTTCAGTGTTTCCGAGGGGCGTGCGGCAGCAGG
AGGGCCACCAGCACTAGCACCGGCGCAAATCGAAATAGCACGAGGAGTCG
AGTTTGGGCAGGAAAGAAAGAGGCAGCAACACCAAAGGAACACATTCTGA
ATTTTCGCGACGAGATTCGACGCGGAGCTGGTGGGCGTCGGCGACACGTT
CACTACGCTCGACGACCCGGAGAGCCTGGCAGGTCTGGTGAGACGACGCT
TCGATCACATTCCCGTGTCCGAAAGAGATACACAGGTGTATGGTAAAGGT
ATTCCGTTGGTGTTCAGTGTTTCCGAGGGGCGTGCGGCAGCAGGAGGGCC
ACCAGCACTAGCACCGGCGCAAATCGAAATAGCACGAGGAGTCGAGTTTG
GGCAGGAAAGAAAGAGGCAGCAACACCAAAGGAACACATTCTGA
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