mRNA_H-canaliculatus_F_contig14604.3546.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig14604.3546.1
Unique NamemRNA_H-canaliculatus_F_contig14604.3546.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig14604.3546.1 vs. uniprot
Match: D7G2D4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2D4_ECTSI)

HSP 1 Score: 417 bits (1073), Expect = 1.520e-141
Identity = 203/317 (64.04%), Postives = 244/317 (76.97%), Query Frame = 1
Query:    1 MVLDVRDILDVCEIYTVAEVNAKKHLGDWDLGVRSTSWHACVGEGFVV-ASKQKRRADGEQTKPFRVFHSPWSKEGTPDDPLFVLRREGFFLNDGNLAFFAAPITMYNDAFNAWGMLNKHSVGGSYFGWAWRSQAVQRLKVQTRVGTLASTGACNQGEIGLQCEIIGLLQKGCLGSCKLTDSDGNSFEEQVFVRGTLQMLCGDGQGRAKNLGVKAPNGTSRYCCAYCMVEQRADDSGGELGDARFDVDANRRTYGQTLENVAELESLAGSPTEQAERSVQVGLCASDSTGLSLPLYHAMVINPALHVPPERLHFDAL 948
            ++L+V D+L + EIYTV E++A KH G+WD G R   W   +GEGFVV A K+++RA  +  + F V H+PW KEGTPD+PLFVLRREGF LN+ NLAFF  P+T YNDAFN +GM NKHSVGG YFGW WR+QAVQRLK QT VGTLASTGAC QGEIGLQCEI+GLLQ+GCLG C LT+ DG ++ ++VFVRG L M CGDG GRAKNLG KA N  SR+ C YCMVEQR D  GG+LGDA++D+DANRRT+G   E  A L+SL+  P+EQ+ RS+++GL A D TGL LPLY AM+I P   VP ERLHFDAL
Sbjct:   33 LLLEVDDVLGLAEIYTVDEMDADKHDGEWDQGARCDMWDRFLGEGFVVQAGKKRQRAGDDPVQQFEVTHAPWCKEGTPDNPLFVLRREGFHLNNENLAFFLTPVTFYNDAFNCFGMGNKHSVGGGYFGWPWRTQAVQRLKRQTHVGTLASTGACCQGEIGLQCEILGLLQQGCLGECMLTEDDGTTYLQEVFVRGGLLMWCGDGPGRAKNLGSKACNHFSRFPCPYCMVEQRDDAFGGDLGDAQYDLDANRRTWGGITEGFATLQSLSDDPSEQSRRSMELGLVAPDGTGLPLPLYDAMLIVPTEAVPVERLHFDAL 349          
BLAST of mRNA_H-canaliculatus_F_contig14604.3546.1 vs. uniprot
Match: A0A6H5JWC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWC0_9PHAE)

HSP 1 Score: 364 bits (935), Expect = 2.660e-118
Identity = 175/273 (64.10%), Postives = 212/273 (77.66%), Query Frame = 1
Query:    1 MVLDVRDILDVCEIYTVAEVNAKKHLGDWDLGVRSTSWHACVGEGFVV-ASKQKRRADGEQTKPFRVFHSPWSKEGTPDDPLFVLRREGFFLNDGNLAFFAAPITMYNDAFNAWGMLNKHSVGGSYFGWAWRSQAVQRLKVQTRVGTLASTGACNQGEIGLQCEIIGLLQKGCLGSCKLTDSDGNSFEEQVFVRGTLQMLCGDGQGRAKNLGVKAPNGTSRYCCAYCMVEQRADDSGGELGDARFDVDANRRTYGQTLENVAELESLAGSPTE 816
            ++L+V D+L + EIYT  E++A KH G+WD G R   W   +GEGFVV A K+++RA  +  + F V H+PW KEGTPD+PLFVLRREGF LN+ NLAFF+AP+T YNDAFN +GM NKHSVGG YFGW WR+QAVQRLK QT VGTLASTGAC QGEIGLQCEI+GLLQ+GCLG C LT+ DG ++ ++VFVRG L M CGDG GRAKNLG KA N  SR+ C YCMVEQR D  GG+LGDA++D+DANRRT+G   E  A L+SL+  P+E
Sbjct:  409 LLLEVADVLGLAEIYTEDEMDADKHDGEWDQGARCDMWGRFLGEGFVVQAGKKRQRAGDDPVQQFEVTHAPWCKEGTPDNPLFVLRREGFHLNNENLAFFSAPVTFYNDAFNCFGMGNKHSVGGGYFGWPWRTQAVQRLKRQTHVGTLASTGACCQGEIGLQCEILGLLQRGCLGECMLTEDDGTTYLQEVFVRGGLLMWCGDGPGRAKNLGSKACNHFSRFPCPYCMVEQRDDAFGGDLGDAQYDLDANRRTWGGITEGFATLQSLSDDPSE 681          
BLAST of mRNA_H-canaliculatus_F_contig14604.3546.1 vs. uniprot
Match: A0A6H5KML3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KML3_9PHAE)

HSP 1 Score: 340 bits (872), Expect = 8.030e-111
Identity = 163/280 (58.21%), Postives = 206/280 (73.57%), Query Frame = 1
Query:  112 WHACVGEGFVVASKQKRRADGE-QTKPFRVFHSPWSKEGTPDDPLFVLRREGFFLNDGNLAFFAAPITMYNDAFNAWGMLNKHSVGGSYFGWAWRSQAVQRLKVQTRVGTLASTGACNQGEIGLQCEIIGLLQKGCLGSCKLTDSDGNSFEEQVFVRGTLQMLCGDGQGRAKNLGVKAPNGTSRYCCAYCMVEQRADDSGGELGDARFDVDANRRTYGQTLENVAELESLAGSPTEQAERSVQVGLCASDSTGLSLPLYHAMVINPALHVPPERLHFDAL 948
            W     EGFV A+  KRR  G+   KPF+V  +PW  EGT D PLF +R +G  LND NLAF++AP+    DAFNAWG+ NKHS+GGSYFGW WRSQAVQRLK QT VGTLA+ GA ++GE GLQCEI+GLLQ+GCLG   L D  G   EE+VFVRG L ++CGDG GR+K LG KAPN  S++ C+YCMV    D++GG++G+ +FD+D +RRT+G+T++  +ELE+LA  P +Q ERS ++GL A +++GL LP YHAM I P  HVP ERLHFDAL
Sbjct:  212 WDRFYAEGFVTAAGTKRRHQGDAMPKPFKVSEAPWHAEGTTDKPLFGVRHQGVHLNDMNLAFYSAPVVFSCDAFNAWGLGNKHSIGGSYFGWGWRSQAVQRLKNQTHVGTLATPGARSEGENGLQCEILGLLQQGCLGRRVLRDEQGARSEEEVFVRGGLLLMCGDGPGRSKCLGTKAPNNFSKFPCSYCMVSHGDDETGGDVGNPQFDIDKHRRTWGRTMDGFSELEALADDPLQQEERSKELGLVAPNASGLKLPRYHAMRIVPGDHVPVERLHFDAL 491          
BLAST of mRNA_H-canaliculatus_F_contig14604.3546.1 vs. uniprot
Match: A0A6H5KU21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU21_9PHAE)

HSP 1 Score: 335 bits (860), Expect = 5.150e-110
Identity = 163/273 (59.71%), Postives = 206/273 (75.46%), Query Frame = 1
Query:  130 EGFVVASKQKRRADGEQTKPFRVFHSPWSKEGTPDDPLFVLRREGFFLNDGNLAFFAAPITMYNDAFNAWGMLNKHSVGGSYFGWAWRSQAVQRLKVQTRVGTLASTGACNQGEIGLQCEIIGLLQKGCLGSCKLTDSDGNSFEEQVFVRGTLQMLCGDGQGRAKNLGVKAPNGTSRYCCAYCMVEQRADDSGGELGDARFDVDANRRTYGQTLENVAELESLAGSPTEQAERSVQVGLCASDSTGLSLPLYHAMVINPALHVPPERLHFDAL 948
            +G    +K+  +++  + KPF V  SPW  EG  + PL+ LRREG  LND N+ +++AP   + DAFNA+GM  KHS+GGSYFGWAWR+ AVQRLK QT VGTLAS GAC+QGE GLQCEI+GLLQKGCLG CKLTD +G +FE++VFVRG L ++CGDGQGR+K LG KAPN  S++ CAYCMV QR DD+GG+LG+ RFD+D +RRT+GQ  + ++EL++LA  P EQ  RS  +GL   D++GL LPLY AM I P  +VP ERLHFDAL
Sbjct:   34 QGCQTGTKRALQSNA-RPKPFAVTESPWCAEGPANRPLWGLRREGVHLNDMNMPYYSAPTVFHCDAFNAFGMGCKHSIGGSYFGWAWRTPAVQRLKHQTHVGTLASPGACSQGETGLQCEILGLLQKGCLGRCKLTDEEGAAFEQEVFVRGGLLLMCGDGQGRSKFLGTKAPNSWSKHPCAYCMVSQRDDDTGGDLGNPRFDIDKHRRTWGQITDGLSELDALADVPREQDRRSRDLGLVPPDASGLPLPLYTAMRIVPTENVPVERLHFDAL 305          
BLAST of mRNA_H-canaliculatus_F_contig14604.3546.1 vs. uniprot
Match: A0A6H5KQX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQX1_9PHAE)

HSP 1 Score: 340 bits (873), Expect = 5.790e-110
Identity = 174/315 (55.24%), Postives = 217/315 (68.89%), Query Frame = 1
Query:    7 LDVRDILDVCEIYTVAEVNAKKHLGDWDLGVRSTSWHACVGEGFVVASKQKRRADGE-QTKPFRVFHSPWSKEGTPDDPLFVLRREGFFLNDGNLAFFAAPITMYNDAFNAWGMLNKHSVGGSYFGWAWRSQAVQRLKVQTRVGTLASTGACNQGEIGLQCEIIGLLQKGCLGSCKLTDSDGNSFEEQVFVRGTLQMLCGDGQGRAKNLGVKAPNGTSRYCCAYCMVEQRADDSGGELGDARFDVDANRRTYGQTLENVAELESLAGSPTEQAERSVQVGLCASDSTGLSLPLYHAMVINPALHVPPERLHFDAL 948
            L   ++L + E+ T  E+ A  H   WD            GEGFV  +  KR      + KPF V  S W  EG  + PL+ LRREG  LND NL +++AP   + DAFNA+GM  KHS+GGSYFGWAWR+ AVQRL  +T VGTLAS GAC+QGE GLQCEI+GLLQ GCLG CKLTD +G +FE++VFVRG L ++CGDGQGR+K LG KAPN  S++ CAYCMV QR DD+GG+LG+ RFD+D +RRT+GQ  + ++EL++LA  P EQ  RS  +GL   D++GL LPLY AM I P  +VP ERLHFDAL
Sbjct:  144 LKANEVLGLVEMETPHEMAAAGHPYPWD---------RFFGEGFVRQTGTKRALQSNARPKPFAVTESSWCAEGPANRPLWGLRREGVHLNDMNLPYYSAPTVFHCDAFNAFGMGCKHSIGGSYFGWAWRTPAVQRLNHRTHVGTLASPGACSQGETGLQCEILGLLQNGCLGRCKLTDEEGAAFEQEVFVRGGLLLMCGDGQGRSKFLGTKAPNSWSKHPCAYCMVSQRDDDTGGDLGNPRFDIDKHRRTWGQITDGLSELDALADVPREQDRRSRDLGLVPPDASGLPLPLYTAMRIVPTENVPVERLHFDAL 449          
BLAST of mRNA_H-canaliculatus_F_contig14604.3546.1 vs. uniprot
Match: A0A6H5J9E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9E1_9PHAE)

HSP 1 Score: 345 bits (886), Expect = 2.310e-107
Identity = 167/279 (59.86%), Postives = 210/279 (75.27%), Query Frame = 1
Query:    1 MVLDVRDILDVCEIYTVAEVNAKKHLGDWDLGVRSTSWHACVGEGFVVASKQKRRADGEQT-KPFRVFHSPWSKEGTPDDPLFVLRREGFFLNDGNLAFFAAPITMYNDAFNAWGMLNKHSVGGSYFGWAWRSQAVQRLKVQTRVGTLASTGACNQGEIGLQCEIIGLLQKGCLGSCKLTDSDGNSFEEQVFVRGTLQMLCGDGQGRAKNLGVKAPNGTSRYCCAYCMVEQRADDSGGELGDARFDVDANRRTYGQTLENVAELESLAGSPTEQAERSV 834
            M L+V D+L + EIYT  E+   +H G+W+ GVR TSW   VGEGFVV ++ KRR  GE + + + V H+PW KEGT +DPLFVLRREGF LN+ NL FF+AP+  YN+AFN +GM NKHSVGG+YFGW WRSQAVQRL+ QT VGTLASTGA   GEIGLQCEI+GLLQ+GC+G C L D DG ++ ++VFVRG L M CGDG GRAK LG KA N  SR+ C YCMVEQR + +GG+LG+A++D+DA+RRT+GQ       L+SLA +P E + +S+
Sbjct:  214 MQLNVADVLGLAEIYTADEMEVDQHGGEWNQGVRCTSWDRFVGEGFVVQARVKRRRSGEDSVQKYEVTHAPWCKEGTSEDPLFVLRREGFNLNNDNLVFFSAPVVCYNNAFNCFGMGNKHSVGGTYFGWPWRSQAVQRLRQQTHVGTLASTGASCAGEIGLQCEILGLLQRGCVGECTLKDDDGATYNQEVFVRGGLLMWCGDGPGRAKVLGSKACNHFSRFPCPYCMVEQRDNITGGDLGNAQYDIDAHRRTWGQITAGFDTLKSLADNPAEHSRQSM 492          
BLAST of mRNA_H-canaliculatus_F_contig14604.3546.1 vs. uniprot
Match: A0A6H5KLQ7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLQ7_9PHAE)

HSP 1 Score: 322 bits (826), Expect = 1.380e-100
Identity = 153/255 (60.00%), Postives = 193/255 (75.69%), Query Frame = 1
Query:  184 KPFRVFHSPWSKEGTPDDPLFVLRREGFFLNDGNLAFFAAPITMYNDAFNAWGMLNKHSVGGSYFGWAWRSQAVQRLKVQTRVGTLASTGACNQGEIGLQCEIIGLLQKGCLGSCKLTDSDGNSFEEQVFVRGTLQMLCGDGQGRAKNLGVKAPNGTSRYCCAYCMVEQRADDSGGELGDARFDVDANRRTYGQTLENVAELESLAGSPTEQAERSVQVGLCASDSTGLSLPLYHAMVINPALHVPPERLHFDAL 948
            KPF+V  +PW  EGT D PLF +R +G  LND NLAF++AP+    DAFNAWG+ NKHS+GGSYF W WRSQAVQRLK QT VGTLA+ GA ++GE GLQCEI+GLLQ+GCLG   L D  G   EE+VFVRG L ++CGDG GR+K LG KAPN  S++ C+YCMV    D++GG++G+ +FD+D +RRT G+T++  +ELE+LA  P +Q ERS ++GL A +++GL LPLYHAM I P  HVP ERLHFDAL
Sbjct:    3 KPFKVSEAPWHAEGTTDKPLFGVRHQGVHLNDMNLAFYSAPVVFSCDAFNAWGLGNKHSIGGSYFDWGWRSQAVQRLKNQTHVGTLATPGARSEGENGLQCEILGLLQQGCLGRRVLRDEQGARSEEEVFVRGGLLLMCGDGPGRSKCLGTKAPNNFSKFPCSYCMVSHGDDETGGDVGNPQFDIDKHRRTSGRTMDGFSELEALADDPLQQEERSKELGLVAPNASGLKLPLYHAMRIVPGDHVPVERLHFDAL 257          
BLAST of mRNA_H-canaliculatus_F_contig14604.3546.1 vs. uniprot
Match: A0A6H5K9M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M0_9PHAE)

HSP 1 Score: 330 bits (845), Expect = 7.020e-100
Identity = 165/286 (57.69%), Postives = 199/286 (69.58%), Query Frame = 1
Query:   94 GVRSTSWHACVGEGFVVASKQKRRADGEQT-KPFRVFHSPWSKEGTPDDPLFVLRREGFFLNDGNLAFFAAPITMYNDAFNAWGMLNKHSVGGSYFGWAWRSQAVQRLKVQTRVGTLASTGACNQGEIGLQCEIIGLLQKGCLGSCKLTDSDGNSFEEQVFVRGTLQMLCGDGQGRAKNLGVKAPNGTSRYCCAYCMVEQRADDSGGELGDARFDVDANRRTYGQTLENVAELESLAGSPTEQAERSVQVGLCASDSTGLSLPLYHAMVINPALHVPPERLHFDAL 948
            G  +  W   VGEGFV  +  KR        KPF V  SPW  EG  + PL+ LRR G   ND +L FF+A +    DAFNA+GM  KHSVGGSYFGWAWR+ AVQRLK Q+ VGTLAS GAC +GEIGLQCE++GLLQ GCLG  KLTD +G +FE++VFVRG L ++CGDGQGR+K LG KAPN  SR+ CAYCMV QR DD+ G+LG+ RFD+D +RRT+GQ  +   EL  LA  P E   RS ++GL   D++GL LPLY AM + P  +VP ERLHFDAL
Sbjct:  540 GGHNFPWDRFVGEGFVRRTGTKRPLQSSDLPKPFTVSESPWCMEGPAERPLWGLRRSGVHFNDTDLPFFSASLVFNCDAFNAFGMGCKHSVGGSYFGWAWRAPAVQRLKHQSHVGTLASPGACCRGEIGLQCEVLGLLQNGCLGRAKLTDQEGAAFEQEVFVRGGLLLMCGDGQGRSKFLGTKAPNSWSRHPCAYCMVRQRTDDTSGDLGNPRFDIDKHRRTWGQITKGFEELHGLADDPRELERRSKELGLVEPDASGLPLPLYDAMRVVPTENVPVERLHFDAL 825          
BLAST of mRNA_H-canaliculatus_F_contig14604.3546.1 vs. uniprot
Match: A0A6H5K3Q6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3Q6_9PHAE)

HSP 1 Score: 314 bits (804), Expect = 7.830e-100
Identity = 166/304 (54.61%), Postives = 209/304 (68.75%), Query Frame = 1
Query:   28 DVCE----IYTVAEVNAKKHLGDWDLGVRSTSWHACVGEGFVVASKQKRRADGEQTKPFRVFHSPWSKEGTPDDPLFVLRREGFFLNDGNLAFFAAPITMYNDAFNAWGMLNKHSVGGSYFGWAWRSQAVQRLKVQTRVGTLASTGACNQGEIGLQCEIIGLLQK-------GCLGSCKLTDSDGNSFEEQVFVRGTLQMLCGDGQGRAKNLGVKAPNGTSRYCCAYCMVEQRADDSGGELGDARFDVDANRRTYGQTLENVAELESLAGSPTEQAERSVQVGLCASDSTGLSLPLYHAMVINP 906
            D+CE    +    ++ A KH G+WD GVR TSW    GEGFVV   ++RR++ + T+ + V H+PW KEGT +DPLFVLRREGF LN+ NL F +AP+  YNDAFN +GM NKHSVG +YFGW WRSQAVQRL+ QT VGTLASTGA  QGEIGLQCE++GLLQ+       G         SD N     VFVRG L +  GDG GRAK LG KA N  SR+ C YCMVEQR + +GG+LGDA++D++ANRRT+GQ       L+SLA +P EQ+ +S+ +GL  +DS G SLP+Y +M+  P
Sbjct:   32 DLCESGKTVLLERKLEADKHDGEWDQGVRCTSWDRFWGEGFVV---KRRRSEEDSTQKYEVTHAPWCKEGTAEDPLFVLRREGFHLNNDNLVFVSAPVACYNDAFNCFGMGNKHSVGSTYFGWPWRSQAVQRLRRQTHVGTLASTGASCQGEIGLQCEVLGLLQRXDGKTPEGAACFTTSLPSDENPTP-MVFVRGGLLLWVGDGPGRAKVLGSKACNNFSRFPCPYCMVEQRDNITGGDLGDAQYDIEANRRTWGQITAGFDTLKSLADNPVEQSRQSMVLGL-VTDSNGPSLPMYDSMLTAP 330          
BLAST of mRNA_H-canaliculatus_F_contig14604.3546.1 vs. uniprot
Match: A0A6H5K0J4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0J4_9PHAE)

HSP 1 Score: 318 bits (816), Expect = 3.510e-96
Identity = 164/307 (53.42%), Postives = 210/307 (68.40%), Query Frame = 1
Query:    7 LDVRDILDVCEIYTVAEVNAKKHLGDWDLGVRSTSWHACVGEGFV--VASKQKRRADGEQTKPFRVFHSPWSKEGTPDDPLFVLRREGFFLNDGNLAFFAAPITMYNDAFNAWGMLNKHSVGGSYFGWAWRSQAVQRLKVQTRVGTLASTGACNQGEIGLQCEIIGLLQKGCLGSCKLTDSDGNSFEEQVFVRGTLQMLCGDGQGRAKNLGVKAPNGTSRYCCAYCMVEQRADDSGGELGDARFDVDANRRTYGQTLENVAELESLAGSPTEQAERSVQVGLCASDSTGLSLPLYHAMVINPALHVP 921
            L   D+L + E+ T  E+ A  H   WD            GEGF+    +KQ  +++  + KPF V  SPW  EG  + PL+ LRREG  LN+ NL +++AP   + DAFNA+GM  KHS+GGSYFGWAWR+ AVQRLK QT VGTLAS GAC+QGE GLQCEI+GLL  GCLG CKLTD +G +FE++VFVRG L ++CGDGQGR+K LG K     S++ CAYCMV QR DD+GG+LG+ RFD+D +RRT+GQ  + ++EL++LA  P EQ  RS  +GL   D++GL LPLY AM I P  +VP
Sbjct:  434 LKANDVLGLVEMETPHEMAAAGHPYPWD---------RFFGEGFLRQTGTKQALQSNA-RPKPFAVTESPWCAEGPANSPLWGLRREGVHLNNMNLPYYSAPTVFHCDAFNAFGMGCKHSIGGSYFGWAWRTPAVQRLKHQTHVGTLASPGACSQGETGLQCEILGLLGNGCLGRCKLTDDEGAAFEQEVFVRGGLLLMCGDGQGRSKFLGTKGSKSWSKHPCAYCMVSQRDDDTGGDLGNPRFDIDKHRRTWGQITDGLSELDALADVPREQDRRSRDLGLVPPDASGLPLPLYTAMRIVPTENVP 730          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14604.3546.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2D4_ECTSI1.520e-14164.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWC0_9PHAE2.660e-11864.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KML3_9PHAE8.030e-11158.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KU21_9PHAE5.150e-11059.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQX1_9PHAE5.790e-11055.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9E1_9PHAE2.310e-10759.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLQ7_9PHAE1.380e-10060.00Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9M0_9PHAE7.020e-10057.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3Q6_9PHAE7.830e-10054.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0J4_9PHAE3.510e-9653.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14604contigH-canaliculatus_F_contig14604:330..1996 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size948
Cds size948
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14604.3546.1prot_H-canaliculatus_F_contig14604.3546.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig14604 330..1996 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929209.6950898-CDS-H-canaliculatus_F_contig14604:329..7101622929209.6950898-CDS-H-canaliculatus_F_contig14604:329..710Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14604 330..710 -
1696845719.0209222-CDS-H-canaliculatus_F_contig14604:329..7101696845719.0209222-CDS-H-canaliculatus_F_contig14604:329..710Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14604 330..710 -
1622929209.7144203-CDS-H-canaliculatus_F_contig14604:1157..13701622929209.7144203-CDS-H-canaliculatus_F_contig14604:1157..1370Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14604 1158..1370 -
1696845719.029486-CDS-H-canaliculatus_F_contig14604:1157..13701696845719.029486-CDS-H-canaliculatus_F_contig14604:1157..1370Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14604 1158..1370 -
1622929209.7288256-CDS-H-canaliculatus_F_contig14604:1642..19961622929209.7288256-CDS-H-canaliculatus_F_contig14604:1642..1996Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14604 1643..1996 -
1696845719.0377774-CDS-H-canaliculatus_F_contig14604:1642..19961696845719.0377774-CDS-H-canaliculatus_F_contig14604:1642..1996Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14604 1643..1996 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig14604.3546.1

>prot_H-canaliculatus_F_contig14604.3546.1 ID=prot_H-canaliculatus_F_contig14604.3546.1|Name=mRNA_H-canaliculatus_F_contig14604.3546.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=316bp
MVLDVRDILDVCEIYTVAEVNAKKHLGDWDLGVRSTSWHACVGEGFVVAS
KQKRRADGEQTKPFRVFHSPWSKEGTPDDPLFVLRREGFFLNDGNLAFFA
APITMYNDAFNAWGMLNKHSVGGSYFGWAWRSQAVQRLKVQTRVGTLAST
GACNQGEIGLQCEIIGLLQKGCLGSCKLTDSDGNSFEEQVFVRGTLQMLC
GDGQGRAKNLGVKAPNGTSRYCCAYCMVEQRADDSGGELGDARFDVDANR
RTYGQTLENVAELESLAGSPTEQAERSVQVGLCASDSTGLSLPLYHAMVI
NPALHVPPERLHFDAL
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mRNA from alignment at H-canaliculatus_F_contig14604:330..1996-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig14604.3546.1 ID=mRNA_H-canaliculatus_F_contig14604.3546.1|Name=mRNA_H-canaliculatus_F_contig14604.3546.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1667bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14604:330..1996- (Hapterophycus canaliculatus Oshoro5f female)
ATGGTGCTGGATGTGCGCGACATCCTGGACGTGTGCGAGATTTACACCGT GGCAGAGGTTAATGCCAAGAAGCACCTAGGCGACTGGGATCTTGGCGTTC GATCGACATCGTGGCACGCCTGTGTTGGGGAGGGCTTCGTTGTTGCGTCA AAGCAAAAGCGGAGAGCCGATGGCGAGCAAACGAAGCCTTTTCGAGTCTT CCATTCGCCTTGGAGCAAAGAAGGGACGCCCGACGATCCACTCTTCGTCT TGCGCAGAGAAGGTTTTTTTCTCAACGATGGCAATCTTGCCTTCTTTGCC GCTCCCATCACGATGTACAACGACGCGTTCAACGCGTGGGGAATGCTGAA CAAGGTGCGATGGGGCAAGCGGCTTGTAATTCTTGACCTGTCAAAATATA CGCTCACTGGTTGGTTGTCCCACGCTTACTTCTGGCAGCACAACCTTCTC ATGCCGACTCTCCGTAGTAAGGACCGAGACATTTTCGGTTGGGCTGGTCG GACACAGCATATCATCCTTGATAGAGGAGTATACAGCAGGCGACTCGAAG CAGAACCTCGCACGTTGCTGATGGCTCTCGAAATATCAACGTGAGTTTTG GACCGCCCCATTTGTCGTCCTTGCAGCATTCCGTCGGGGGCTCGTACTTT GGATGGGCATGGAGGAGCCAAGCGGTGCAAAGGCTGAAAGTGCAAACACG TGTCGGAACGTTGGCGAGCACTGGGGCTTGTAACCAGGGAGAGATCGGGC TCCAGTGCGAAATAATCGGGCTCTTACAGAAGGGGTGCTTGGGATCGTGC AAACTCACCGACAGCGACGGCAATTCTTTCGAGGAGCAGGTACGTAGTTT TAACGACGGCATAGGTGCAGGACGTGACGTCCGGCACACCAAGTCCACGA AATATGAGGTGCCTAGGAAGGCCGGCAGAAAAGGATGATGTGCTTCTGTC CATGAAGCGTGGGGGAGTAGGGGGGAAGGTTTCGACGTGCTTCACGTTCG GGTTACTTCCCACGCTGTGTAGTATCGACCTGATCTCACTCGCGGCGATG GAACGGAACACTGCAGAGATATTGCCAATCACATCGTTCAGTGAGTTCGC GTATCGAATATATATTAGTGCCGCCATCTGCAAACACACTATCCGTTTAC GAGGAGGAGTAGGAGCCAACGAAGCGGAATAACGGAGAGTTGTGCAAAGA TGCATAAACCAGAAGTGCGGAACACCTGGTGCGCGCGTGTGCGTCGATTC AAGGGCCCCCAAACATGTTTCCTCCGCCGCTTGCAGGTGTTCGTGCGTGG TACTCTGCAGATGCTGTGTGGGGACGGACAGGGGAGGGCGAAAAATCTTG GCGTGAAGGCCCCCAACGGCACCTCGAGGTACTGCTGCGCGTACTGCATG GTGGAGCAGCGGGCGGATGACTCCGGGGGAGAACTGGGTGACGCGCGGTT TGACGTCGACGCCAATCGGCGCACGTATGGGCAAACGCTGGAGAATGTTG CTGAACTCGAGTCCCTCGCCGGATCGCCGACGGAACAAGCCGAGCGTTCG GTACAAGTTGGCCTTTGTGCGTCGGACTCCACGGGGCTGTCTCTCCCCCT GTACCATGCGATGGTCATCAACCCGGCCCTGCATGTCCCACCGGAACGGC TTCACTTCGATGCACTG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14604:330..1996-

>mRNA_H-canaliculatus_F_contig14604.3546.1 ID=mRNA_H-canaliculatus_F_contig14604.3546.1|Name=mRNA_H-canaliculatus_F_contig14604.3546.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1896bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14604:330..1996- (Hapterophycus canaliculatus Oshoro5f female)
ATGGTGCTGGATGTGCGCGACATCCTGGACGTGTGCGAGATTTACACCGT
GGCAGAGGTTAATGCCAAGAAGCACCTAGGCGACTGGGATCTTGGCGTTC
GATCGACATCGTGGCACGCCTGTGTTGGGGAGGGCTTCGTTGTTGCGTCA
AAGCAAAAGCGGAGAGCCGATGGCGAGCAAACGAAGCCTTTTCGAGTCTT
CCATTCGCCTTGGAGCAAAGAAGGGACGCCCGACGATCCACTCTTCGTCT
TGCGCAGAGAAGGTTTTTTTCTCAACGATGGCAATCTTGCCTTCTTTGCC
GCTCCCATCACGATGTACAACGACGCGTTCAACGCGTGGGGAATGCTGAA
CAAGATGGTGCTGGATGTGCGCGACATCCTGGACGTGTGCGAGATTTACA
CCGTGGCAGAGGTTAATGCCAAGAAGCACCTAGGCGACTGGGATCTTGGC
GTTCGATCGACATCGTGGCACGCCTGTGTTGGGGAGGGCTTCGTTGTTGC
GTCAAAGCAAAAGCGGAGAGCCGATGGCGAGCAAACGAAGCCTTTTCGAG
TCTTCCATTCGCCTTGGAGCAAAGAAGGGACGCCCGACGATCCACTCTTC
GTCTTGCGCAGAGAAGGTTTTTTTCTCAACGATGGCAATCTTGCCTTCTT
TGCCGCTCCCATCACGATGTACAACGACGCGTTCAACGCGTGGGGAATGC
TGAACAAGCATTCCGTCGGGGGCTCGTACTTTGGATGGGCATGGAGGAGC
CAAGCGGTGCAAAGGCTGAAAGTGCAAACACGTGTCGGAACGTTGGCGAG
CACTGGGGCTTGTAACCAGGGAGAGATCGGGCTCCAGTGCGAAATAATCG
GGCTCTTACAGAAGGGGTGCTTGGGATCGTGCAAACTCACCGACAGCGAC
GGCAATTCTTTCGAGGAGCAGCATTCCGTCGGGGGCTCGTACTTTGGATG
GGCATGGAGGAGCCAAGCGGTGCAAAGGCTGAAAGTGCAAACACGTGTCG
GAACGTTGGCGAGCACTGGGGCTTGTAACCAGGGAGAGATCGGGCTCCAG
TGCGAAATAATCGGGCTCTTACAGAAGGGGTGCTTGGGATCGTGCAAACT
CACCGACAGCGACGGCAATTCTTTCGAGGAGCAGGTGTTCGTGCGTGGTA
CTCTGCAGATGCTGTGTGGGGACGGACAGGGGAGGGCGAAAAATCTTGGC
GTGAAGGCCCCCAACGGCACCTCGAGGTACTGCTGCGCGTACTGCATGGT
GGAGCAGCGGGCGGATGACTCCGGGGGAGAACTGGGTGACGCGCGGTTTG
ACGTCGACGCCAATCGGCGCACGTATGGGCAAACGCTGGAGAATGTTGCT
GAACTCGAGTCCCTCGCCGGATCGCCGACGGAACAAGCCGAGCGTTCGGT
ACAAGTTGGCCTTTGTGCGTCGGACTCCACGGGGCTGTCTCTCCCCCTGT
ACCATGCGATGGTCATCAACCCGGCCCTGCATGTCCCACCGGAACGGCTT
CACTTCGATGCACTGGTGTTCGTGCGTGGTACTCTGCAGATGCTGTGTGG
GGACGGACAGGGGAGGGCGAAAAATCTTGGCGTGAAGGCCCCCAACGGCA
CCTCGAGGTACTGCTGCGCGTACTGCATGGTGGAGCAGCGGGCGGATGAC
TCCGGGGGAGAACTGGGTGACGCGCGGTTTGACGTCGACGCCAATCGGCG
CACGTATGGGCAAACGCTGGAGAATGTTGCTGAACTCGAGTCCCTCGCCG
GATCGCCGACGGAACAAGCCGAGCGTTCGGTACAAGTTGGCCTTTGTGCG
TCGGACTCCACGGGGCTGTCTCTCCCCCTGTACCATGCGATGGTCATCAA
CCCGGCCCTGCATGTCCCACCGGAACGGCTTCACTTCGATGCACTG
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