mRNA_H-canaliculatus_F_contig14545.3514.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14545.3514.1 vs. uniprot
Match: A0A6H5KKY7_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY7_9PHAE) HSP 1 Score: 239 bits (609), Expect = 9.620e-73 Identity = 111/131 (84.73%), Postives = 122/131 (93.13%), Query Frame = 1
Query: 1 KKTSELWHIHGRHFDLTPFLAHHPGGSSILEAMRGAEDITPVFESYHALADTAAIRRSLQKFEWTGKLVDDVSEREAALVGGSGKEPIRYRWDGGGFYAVLTARVKKHFLEKHGQQGIDPRRVSVNRYVKV 393
KKTSELWHIHGRHFDLTPFL HHPGGSSILEAM+GAEDITPVFESYHALA +AAIR+SL+KFEWTGKLVDDVSEREAALVGG+ KEP+RYRWD GGFYAVLTARVK +FL+KHG+ G+DPR SVNR+VK
Sbjct: 87 KKTSELWHIHGRHFDLTPFLDHHPGGSSILEAMKGAEDITPVFESYHALAHSAAIRQSLEKFEWTGKLVDDVSEREAALVGGTRKEPVRYRWDEGGFYAVLTARVKSYFLQKHGRAGVDPRNASVNRFVKA 217
BLAST of mRNA_H-canaliculatus_F_contig14545.3514.1 vs. uniprot
Match: D7G7E3_ECTSI (FA_desaturase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7E3_ECTSI) HSP 1 Score: 167 bits (424), Expect = 1.010e-48 Identity = 77/98 (78.57%), Postives = 91/98 (92.86%), Query Frame = 1
Query: 97 MRGAEDITPVFESYHALADTAAIRRSLQKFEWTGKLVDDVSEREAALVGGSGKEPIRYRWDGGGFYAVLTARVKKHFLEKHGQQGIDPRRVSVNRYVK 390
M+GAEDITPVFESYHALA +AAIR++L+KFEWTGKL+DDVSEREAALVGG+ KEP+RYRWD GGFYAVL ARVK +FL+KHG+ G+DPR+ SVNR+VK
Sbjct: 1 MKGAEDITPVFESYHALAHSAAIRQNLEKFEWTGKLMDDVSEREAALVGGTRKEPVRYRWDEGGFYAVLIARVKAYFLQKHGRAGVDPRKASVNRFVK 98
BLAST of mRNA_H-canaliculatus_F_contig14545.3514.1 vs. uniprot
Match: A0A835YLX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLX3_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 3.530e-18 Identity = 41/80 (51.25%), Postives = 56/80 (70.00%), Query Frame = 1
Query: 100 RGAEDITPVFESYHALADTAAIRRSLQKFEWTGKLVDDVSEREAALVGGSGKEPIRYRWDGGGFYAVLTARVKKHFLEKH 339
RG ED+T +FESYHAL++ AIR L+ +TGK+ DD+ +EAA++ G + P+ Y ++ GGFY VL ARVK HFL H
Sbjct: 3 RGLEDVTALFESYHALSNLTAIRHGLKAHLYTGKVTDDLQAKEAAMMRGVDRNPLAYTYEPGGFYDVLKARVKAHFLGCH 82
BLAST of mRNA_H-canaliculatus_F_contig14545.3514.1 vs. uniprot
Match: A0A7S1YAE8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1YAE8_9EUKA) HSP 1 Score: 77.0 bits (188), Expect = 8.770e-14 Identity = 46/127 (36.22%), Postives = 69/127 (54.33%), Query Frame = 1
Query: 13 ELWHIHGRHFDLTPFLAHHPGGSSILEAMRG---AEDITPVFESYHALADTAAIRRSLQKFEWTGKLVDDVSEREAALVGGSGKEPIRYRWDG--------GGFYAVLTARVKKHFLEKHGQQGIDP 360
+ W+I+G ++L+ F+A HPGGS IL A RG +ED+ P+FESYHA A+ +I+ +L ++ V DV +V G P+ +D GG Y + RV+ HF K G++ DP
Sbjct: 17 DYWYIYGLPYNLSSFMAKHPGGSGILAASRGRGRSEDLAPLFESYHAFANVKSIKATLSEYR-----VKDVGVEVHGVVDGL---PVAADYDEETFGSFRPGGAYDEMRRRVRAHFAAKSGKRVDDP 135
BLAST of mRNA_H-canaliculatus_F_contig14545.3514.1 vs. uniprot
Match: A0A6C0KIQ1_9ZZZZ (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0KIQ1_9ZZZZ) HSP 1 Score: 76.3 bits (186), Expect = 1.410e-13 Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = 1
Query: 13 ELWHIHGRHFDLTPFLAHHPGGSSILEAMRGAEDITPVFESYHALADTAAIRRSLQKFEWTG 198
+LWHIHG+ +DLT FL HPGG +ILE RG +DI+ +FE+YHA +D I LQK++ G
Sbjct: 3 DLWHIHGKTYDLTSFLEQHPGGRAILEKTRGQKDISALFETYHAFSDIQQIETILQKYQVAG 64
BLAST of mRNA_H-canaliculatus_F_contig14545.3514.1 vs. uniprot
Match: A0A7S3TA30_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TA30_EMIHU) HSP 1 Score: 64.7 bits (156), Expect = 5.710e-10 Identity = 40/120 (33.33%), Postives = 59/120 (49.17%), Query Frame = 1
Query: 13 ELWHIHGRHFDLTPFLAHHPGGSSILEAMRGAEDITPVFESYHALADTAAIRRSLQKFEWTGKLVDDVSEREAALVGGSGKEPIRYRWDGGGFYAVLTARVKKHFLEKHGQQGIDPRRVS 372
+LW +H + +DLT F+A HPGG +E RG + T +FESYH+LAD +R +L + V++V + G+ R+ W Y L AR + HF +G R S
Sbjct: 99 QLWTVHNKRYDLTGFVARHPGGVQAIELGRG-RNCTTLFESYHSLADERRVRAALARH-----FVEEVPQ-------GAPDYDDRFDWTDTPVYDDLKARFRAHFSSASTGKGRRSHRAS 205
BLAST of mRNA_H-canaliculatus_F_contig14545.3514.1 vs. uniprot
Match: A0A1Y5F9X9_9PROT (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Halobacteriovorax marinus TaxID=97084 RepID=A0A1Y5F9X9_9PROT) HSP 1 Score: 63.9 bits (154), Expect = 3.300e-9 Identity = 38/109 (34.86%), Postives = 53/109 (48.62%), Query Frame = 1
Query: 10 SELWHIHGRHFDLTPFLAHHPGGSSILEAMRGAEDITPVFESYHALADTAAIRRSLQKFEWTGKLVDDVSEREAALVGGSGKEPIRYRWDGGGFYAVLTARVKKHFLEK 336
S+LW IHG+++DLTPF+A HPGG +L +G D T VFES H + ++ L KF V + Y W+ GFY L RV+ + E+
Sbjct: 13 SQLWEIHGKYYDLTPFIARHPGGKRMLLLSKGM-DCTEVFESTHIFDNLP--KKMLPKF----------------FVADNPNYKPTYSWEPDGFYNTLRKRVQVYLTEQ 102
BLAST of mRNA_H-canaliculatus_F_contig14545.3514.1 vs. uniprot
Match: A0A835YNJ3_9STRA (Fatty acid desaturase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNJ3_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 4.470e-8 Identity = 44/118 (37.29%), Postives = 55/118 (46.61%), Query Frame = 1
Query: 16 LWHIHGRHFDLTPFLAHHPGGSSILEAMRGAEDITPVFESYHALADTAAIRRSLQKFEWTGKLVDDVSEREAALVGGSGKEPIRYRWDGGGFYAVLTARVKKHFLEKHGQQGIDPRRV 369
LW +HGR +DL PFLA HPGG + + RG D T +FESYH D A R +L ++ G P R D YA L A V++ LE G+DPR V
Sbjct: 276 LWRVHGRLYDLAPFLARHPGGVAAISLGRG-RDCTALFESYHPFTD--AHRAALARYRVAGGSXXXXXXXXXXXXSSGDAVPSREEADP--LYAELCACVRE-VLE---DAGLDPRGV 384
BLAST of mRNA_H-canaliculatus_F_contig14545.3514.1 vs. uniprot
Match: A0A3M6U6Z9_POCDA (Uncharacterized protein n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6U6Z9_POCDA) HSP 1 Score: 55.8 bits (133), Expect = 2.400e-6 Identity = 38/101 (37.62%), Postives = 54/101 (53.47%), Query Frame = 1
Query: 25 IHGRHFDLTPFLAHHPGGSSILEAMRGAEDITPVFESYHALADTAAIRRSLQKFEWTGKLVDDVSEREAALVGGSGKEPIRYRWDGGGFYAVLTARVKKHF 327
I+G+ +D++ FLA HPGG +L M +D+T VF+SYHA +D + L+KF + G LV S + EP G FY + RV+KHF
Sbjct: 443 INGKVYDVSKFLARHPGGKDVL-CMAAGKDVTIVFQSYHAFSDVPT--KMLEKF-YVGDLV---SAQYPTFP-----EP-------GAFYNTVRERVRKHF 524
BLAST of mRNA_H-canaliculatus_F_contig14545.3514.1 vs. uniprot
Match: I0Z6Y0_COCSC (Acyl-CoA dependent delta5-desaturase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z6Y0_COCSC) HSP 1 Score: 55.5 bits (132), Expect = 3.040e-6 Identity = 39/103 (37.86%), Postives = 58/103 (56.31%), Query Frame = 1
Query: 25 IHGRHFDLTPFLAHHPGGSSILEAMRGAEDITPVFESYHALADTAAIRRSLQKFEWTGKLVDDVSEREAALVGGSGKEPIRYRWDG--GGFYAVLTARVKKHF 327
IHG+ +D+T ++ HHPGGS I +R D + +F+SYH LA R L+KF + G+L D ++R+ + + Y+ D G FY VL RV+K F
Sbjct: 82 IHGKVYDVTRWVPHHPGGSMIF--VRAGGDCSQLFDSYHPLAT----RLLLEKF-YVGEL--DKTDRDTPGI-------VEYQSDTQEGEFYEVLKRRVEKFF 168 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14545.3514.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14545.3514.1 >prot_H-canaliculatus_F_contig14545.3514.1 ID=prot_H-canaliculatus_F_contig14545.3514.1|Name=mRNA_H-canaliculatus_F_contig14545.3514.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=138bp KKTSELWHIHGRHFDLTPFLAHHPGGSSILEAMRGAEDITPVFESYHALAback to top mRNA from alignment at H-canaliculatus_F_contig14545:296..2291- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14545.3514.1 ID=mRNA_H-canaliculatus_F_contig14545.3514.1|Name=mRNA_H-canaliculatus_F_contig14545.3514.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1996bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14545:296..2291- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14545:296..2291- >mRNA_H-canaliculatus_F_contig14545.3514.1 ID=mRNA_H-canaliculatus_F_contig14545.3514.1|Name=mRNA_H-canaliculatus_F_contig14545.3514.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=828bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14545:296..2291- (Hapterophycus canaliculatus Oshoro5f female)back to top |