mRNA_H-canaliculatus_F_contig1454.3513.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1454.3513.1
Unique NamemRNA_H-canaliculatus_F_contig1454.3513.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1454.3513.1 vs. uniprot
Match: D8LCM6_ECTSI (Methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCM6_ECTSI)

HSP 1 Score: 399 bits (1026), Expect = 3.830e-136
Identity = 213/329 (64.74%), Postives = 259/329 (78.72%), Query Frame = 1 
Query:    1 QAKINSAWNATAKEYVGNIQDKGGVADGNSSPS-NVTLDMSVGYKLAARIV-APSNKLE--ESGSPVVLDVASAGGEPAITIAKLLPDATIHATDFAPAMMDLIKQRAAEAGVSNVSASVADGEALTGFGDESVDAVTCTFGMIFMPNWQQAVKEFSRVLRSNGVVAVTLWEKHEDCIFDRLHRVLDTLVPGYEGVIDPMSLGDDKGSPVADEMKAAGLHDVSVSEFSVPLVLAPEARVGDIWEYYTASSPLGQSLSTLEAKGRTNVRQEARDIFESHMEEDWAEGRTPLGLPKN-----------AEDGPRVIYTRALLVVGRKCGGG 942
            +AKIN+AWN++A+ YVGN+QD      G SS S  V+  M+VGYKLA RIV +P +K++  E G  VVLDVASAGGEPAITIAK +P AT+HATDFAPAMMDLI++RAAE GVSNV ASVADGEALTGFGD SVDAVTCT+G++FMPNWQ+A++EFSRVL+ +GVVAVTLWE+ E  +F R+  V++TLVPG++ +ID  +LG+D GS V +EMKAAGL DVS S+FSVP+VL+ +AR  DIWE+YT SSPLGQ++STLE KGRTNVRQEA DIFE  M ++W EGRTPLGL K            A   PR+ Y RAL+VVGRK GGG
Sbjct:   53 KAKINAAWNSSAEAYVGNVQD------GASSASLKVSSGMNVGYKLATRIVTSPYDKVQPKEPGKQVVLDVASAGGEPAITIAKAMPGATVHATDFAPAMMDLIRKRAAEEGVSNVVASVADGEALTGFGDGSVDAVTCTWGLLFMPNWQRAIQEFSRVLKRDGVVAVTLWERQEGSVFQRMRNVVETLVPGFQLLIDAEALGEDGGSAVVEEMKAAGLCDVSASKFSVPVVLSADARPRDIWEHYTESSPLGQTMSTLEKKGRTNVRQEAMDIFEDAMNKEWVEGRTPLGLQKEDDAVAGGSSPAASRPPRIYYVRALVVVGRKTGGG 375
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BLAST of mRNA_H-canaliculatus_F_contig1454.3513.1 vs. uniprot
Match: A0A6H5JCB5_9PHAE (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCB5_9PHAE)

HSP 1 Score: 272 bits (695), Expect = 6.930e-86
Identity = 174/362 (48.07%), Postives = 216/362 (59.67%), Query Frame = 1 
Query:    1 QAKINSAWNATAKEYVGNIQDKGGVADGNSSPS-NVTLDMSVGYKLAARIV-APSNKLE--ESGSPVVLDVASAGGEPAITIAKL--------LPDATIHATDFAPAMMDLIKQRAAEAGVSNVSASVADGEALTGFGDESVDAVTCTFGMIFMPNWQQAVKEFSRVLRSNGVVAVTLWEKHEDCIFDRLHRVLDTLVPGYEGVIDPMSLGDDKGSPVADEMKAA-------------------------GLHDVSVSEFSVPLVLAPEARVGDIWEYYTASSPLGQ-SLSTLEAKGRTNVRQEARDIFESHMEEDWAEGRTPLGLPKNAED-----------GPRVIYTRALLVVGRKCGG 939
            +AKIN+AWN++A+ YV NIQD      G SS S  V+  M+VGYKLA RIV +P +K++  E    VVLDVASAGGEPAITIAK         +P ATIHATDFAP M+DLI++RA E GVSNV ASVADGEALTGFGDE+VDAVTCT+G++FMPNWQ+A++E S                    +F R+  V++TLVPG++ +ID  +LG+D GS V +EMKA+                         G        F  P    P   +G            GQ ++STLE KGRTN+RQEA DIFE  M ++WAEGRTPLGL    +D            PR+ Y RAL+VVGRK GG
Sbjct:   52 KAKINAAWNSSAEAYVRNIQD------GASSASLKVSSGMNVGYKLATRIVTSPYDKVQPKEPEKQVVLDVASAGGEPAITIAKAREGIYRKAMPGATIHATDFAPVMIDLIRKRAVEEGVSNVVASVADGEALTGFGDETVDAVTCTWGLLFMPNWQRAIQEGS--------------------VFQRIRNVVETLVPGFQLLIDAEALGEDGGSAVVEEMKASWTSPRTTGAIKPWLTLSIGSSFRLPGSATSRRPSFRCPWSSRPTRGLGTSGSTTPNPRHSGQQTMSTLEKKGRTNIRQEAMDIFEDSMNKEWAEGRTPLGLQNEGDDLAGGSSPTASRPPRIYYVRALVVVGRKVGG 387
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BLAST of mRNA_H-canaliculatus_F_contig1454.3513.1 vs. uniprot
Match: A0A835YPT1_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPT1_9STRA)

HSP 1 Score: 116 bits (291), Expect = 3.200e-26
Identity = 60/140 (42.86%), Postives = 89/140 (63.57%), Query Frame = 1 
Query:  166 LEESGSPVVLDVASAGGEPAITIAKLLPDATIHATDFAPAMMDLIKQRAA----EAGVSNVSASVADGEA-------------------LTGFGDESVDAVTCTFGMIFMPNWQQAVKEFSRVLRSNGVVAVTLWEKHED 516
            ++  G P VLDVASA GEPA++IA+LLP AT+HATD++P M++ +  R A      G++NV   VADGE+                   L+ F D S+DA+TC+FG++FMP WQ+A++EF RVL+ NG+  + +W   ++
Sbjct:   70 IKGDGPPSVLDVASAAGEPAVSIARLLPQATVHATDYSPGMVEALNTRVAVLRETEGLANVHTGVADGESDILTLLCAVVAACICRAQNLSQFEDASMDAITCSFGIMFMPAWQKAIREFYRVLKPNGIAIINVWGPEQE 209
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BLAST of mRNA_H-canaliculatus_F_contig1454.3513.1 vs. uniprot
Match: A0A2P6TSJ3_CHLSO (Methyltransferase type 11 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TSJ3_CHLSO)

HSP 1 Score: 112 bits (281), Expect = 1.810e-25
Identity = 59/121 (48.76%), Postives = 83/121 (68.60%), Query Frame = 1 
Query:  190 VLDVASAGGEPAITIAKLLPDATIHATDFAPAMMDLIKQRAAEAGVSNVSASVADGEALTGFGDESVDAVTCTFGMIFMPNWQQAVKEFSRVLRSNGVVAVTLWEKHEDCIFDRLHRVLDT 552
            +LDVASA GEPA+T+A  LP A + +TD A A ++L K RAA AG++NVS   AD E L  +GD S DAVTC+ G++FMP+++ AVKEF+RVL+  G+ A  +W+  +   F  + + L T
Sbjct:   57 ILDVASASGEPALTLAVALPQAQLVSTDLAHAFLELGKSRAARAGLTNVSFETADAEDLHRYGDASFDAVTCSLGLMFMPSFELAVKEFARVLKPGGLFAAAVWQSEDRAPFFLVTKKLGT 177
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BLAST of mRNA_H-canaliculatus_F_contig1454.3513.1 vs. uniprot
Match: A0A2P6TIN7_CHLSO (Methyltransferase type 11 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TIN7_CHLSO)

HSP 1 Score: 111 bits (277), Expect = 5.450e-25
Identity = 76/227 (33.48%), Postives = 112/227 (49.34%), Query Frame = 1 
Query:  190 VLDVASAGGEPAITIAKLLPDATIHATDFAPAMMDLIKQRAAEAGVSNVSASVADGEALTGFGDESVDAVTCTFGMIFMPNWQQAVKEFSRVLRSNGVVAVTLWEKHE-DCIFDRLHRVLDTLVPG---------YEGVIDPMSLGDDKGSPVADEMKAAGLHDVSVSEFSVPLVLAPEARVGDIWEYYTA--SSPLGQSLSTLEAKGR-TNVRQEARDIFESHMEE 831
            +LDVASA GEPA ++A  LP AT+HATD  P  + L   RA   G+ N+   VAD E L  F D S DAV C  G++F+PN   A+  F RVL+  G + +T+ +  E    +  L  + + + P          Y     P   GD +  P+ D   AAGL  ++      P++L  +   G+ W   T    +P+  +L  L+A G   N  ++AR + E  + E
Sbjct:   38 ILDVASASGEPAASLAAALPLATVHATDLTPRFVQLGAARAQRLGLRNMRCQVADAERLEPFADASCDAVCCCMGLMFIPNVAAALAAFDRVLKPGGALVITVAQPPEVQPFWTFLSELSEEMCPAAGAAPAEAPYPAEFGPCRFGDPQ--PLLDAAAAAGLSSIACR----PMLLDYQMAAGEWWTSLTQMPDAPVAAALQRLQASGSGANAAEQARQLAERRLRE 258
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BLAST of mRNA_H-canaliculatus_F_contig1454.3513.1 vs. uniprot
Match: A0A7S0N8Q2_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0N8Q2_9CHLO)

HSP 1 Score: 106 bits (265), Expect = 3.140e-23
Identity = 79/270 (29.26%), Postives = 128/270 (47.41%), Query Frame = 1 
Query:    7 KINSAWNATAKEYVGNIQDKGGVADGNSSPSNVTLDMSVGYKLAARIVAPSNKLEESGSPV-VLDVASAGGEPAITIAKLLPDATIHATDFAPAMMDLIKQRAAEAGVSNVSASVADGEALTGFGDESVDAVTCTFGMIFMPNWQQAVKEFSRVLRSNGVVAVTLWEKHEDCIFDRLHRVLDTLVPGYEGVIDPMSLGDDKGSPVADEMKAAGLH----DVSVSEFSVPLVLAPEARVGDIWEYYTASSPLGQSLSTLEAKGRTNVRQEA 801
            ++ + WN +A  Y   I        G ++P N              I+  + + +   +P  +LDVASA GEP++T+AK  P     +TD A A   +   +AA  GV+N++   ADG+AL  + D+S D VTC  G++FMP  ++A+ EF RVL+  G +  T W   + C   R+  V+   +      +DP   G   G  +A +M AAG       V V++  +P   A    +G         SP+G ++    A G +++ + A
Sbjct:   17 RMRAGWNWSATNYASMIS-----VSGYANPIN-------------DIIIKTLREKHGDTPFSLLDVASAYGEPSLTLAKAFPHGKFTSTDLADANCKIGPAQAASRGVTNITYESADGQALP-YPDQSFDVVTCCMGLMFMPEHKKALSEFRRVLKPGGTLLTTTWGPQDRCQHVRVMSVVVAALGFPSSPLDPCKFGT--GEALASDMAAAGFRGAAPQVVVTQVHMPAEYAMSLLMG---------SPVGAAIEARRAAGESDILERA 256
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1454.3513.1 vs. uniprot
Match: A0A5J4Y136_9CHLO (Methyltransf_11 domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y136_9CHLO)

HSP 1 Score: 108 bits (269), Expect = 1.280e-22
Identity = 71/219 (32.42%), Postives = 118/219 (53.88%), Query Frame = 1 
Query:  190 VLDVASAGGEPAITIAKLLPDATIHATDFAPAMMDLIKQRAAEAGVSNVSASVADGEALTGFGDESVDAVTCTFGMIFMPNWQQAVKEFSRVLRSNGVVAVTLWEKHEDCIFDRLHRVLDTLVPGYEGVIDPMSLGDDKGSPVA--DEMKAAGLHDVSVSEFSVPLVLAPEARVGDIWEYYTASSPLGQS---LSTLEAKGRTNVRQEARDIFESHMEE 831
            VLD+AS  G PA+ + + +P+A++ ATD +PA + LI + AA  GV+NV+A  AD + L  F D + DAVTC++G++FMP+ Q+A++E  RVL+  G+   T+W   E   F ++   +   + G +G           G+PV    ++K A   +   + +S P+       + D+  +     P GQS   L  L+A G+ N+  EA  +  + + E
Sbjct:  295 VLDLASNAGSPAVPLGQAIPNASVVATDLSPASVSLISEYAASEGVTNVTAQPADAQHLQEFDDNTFDAVTCSYGLMFMPDHQKALQEAHRVLKLGGLYVATVWAPLEHYQFGQMFSEVARRIAGDQGPPPSPYTPWRFGNPVQLLQDLKGAHFSNAHCTAYSHPMTFP----LADLVAFQLG--PNGQSRSLLDKLKATGKENMYDEAPQVMRAVLTE 507
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1454.3513.1 vs. uniprot
Match: A0A2P6VE33_9CHLO (Methyltransferase type 11 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VE33_9CHLO)

HSP 1 Score: 103 bits (256), Expect = 4.050e-21
Identity = 74/234 (31.62%), Postives = 112/234 (47.86%), Query Frame = 1 
Query:  190 VLDVASAGGEPAITIAKLLPDATIHATDFAPAMMDLIKQRAAEAGVSNVSASVADGEALTGFGDESVDAVTCTFGMIFMPNWQQAVKEFSRVLRSNGVVAVTLWEKHEDCIFDRLHRVLDTLV-PGYEGVIDPMSLGDDKGSPVADEMKAAGLHDVSVSEFSVPLVLAPEARVGDIWEYYTASSPLGQS---LSTLEAKGRTNVRQEARDIFESHMEE-DWAEGRTPLGLPKNA 876
            +LD+ASA GEPA T+A  LP A + +TD A   ++L K RAA  G++NV+   AD E L  +GD S DAV C+ G++FMPN++  ++E  RVL+  G  A T W   +   F +L + L     P        +++      P  +    AGL DV+  E  +   +        +W       PL          EA+   +V +EAR   ++ M +  +   +  L  P NA
Sbjct:   65 ILDLASASGEPAATLAAALPQAQVVSTDLAAPYLELGKARAARLGLANVTFETADAEDLHRYGDASFDAVACSLGVMFMPNYELCLQEVRRVLKPGGRFAATFWGPEDKVPFFQLTKELALEYDPNLPPAASQVAVRFGNPQPFVEAAGEAGLVDVNTRELQIEFFMPDH-----VWWRAMLDMPLPIKPALTKAQEARPGDDVFEEARQRLQARMADAGYLNAQEALHCPGNA 293
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1454.3513.1 vs. uniprot
Match: A0A7S0VV22_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VV22_9CRYP)

HSP 1 Score: 87.0 bits (214), Expect = 7.860e-17
Identity = 46/117 (39.32%), Postives = 71/117 (60.68%), Query Frame = 1 
Query:  151 APSNKLEESGSPVVLDVASAGGEPAITIAKLLPDATIHATDFAPAMMDLIKQRAAEAGVSNVSASVADGEALTGFGDESVDAVTCTFGMIFMPNWQQAVKEFSRVLRSNGVVAVTLW 501
            A    + +S +P +LD+AS  GEPA TIA+ +P A++ ATD +P M+    + AA   + N+ A   D EA++   D S+D VTC +G +F PN ++A++E  RVL+  G +  T W
Sbjct:   57 AVQGAVADSANPTILDLASGPGEPAATIARAIPGASVIATDISPDMVATAAKVAAT--LPNMKAEACDMEAISAHSDGSLDVVTCCYGFMFPPNKEKAIEEAFRVLKPGGTLVATTW 171
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1454.3513.1 vs. uniprot
Match: A0A7C3NYH6_9CHLR (Methyltransferase domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C3NYH6_9CHLR)

HSP 1 Score: 84.7 bits (208), Expect = 2.770e-15
Identity = 66/189 (34.92%), Postives = 100/189 (52.91%), Query Frame = 1 
Query:  190 VLDVASAGGEPAITIAKLL-PDATIHATDFAPAMMDLIKQRAAEAGVSNVSASVADGEALTGFGDESVDAVTCTFGMIFMPNWQQAVKEFSRVLRSNGVVAVTLWEKHEDC-----IFDRLHRV------LDTLVPGYEGVIDPMSLGDDKGSPVADEMKAAGLHDVSVSEFSVPLVLAPEARVGDIWE 720
            V+D+A   G PA+ +A+L+ P  ++ ATD    M+ + ++RAAEAG++N+ A VAD EAL  F D S DA TC FG++F P  ++A  E  RVL+  G  A+++W+  E       + + L R+       D   PG   +  P  L           ++AAG  DV V   S+PL +  E+    +WE
Sbjct:   52 VIDLACGSGHPALDVARLVRPGGSVVATDLVEEMVAVTRRRAAEAGIANLEARVADLEALD-FPDASFDAATCRFGVMFCPQPERAAAEVRRVLKPGGRFALSVWDMPEKSPAQTVVNEALGRLGKPQPAPDFDAPGIYQLAPPGKL--------QRLLEAAGFADVRVE--SLPLTMEYESLEA-LWE 228
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1454.3513.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCM6_ECTSI3.830e-13664.74Methyltransferase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JCB5_9PHAE6.930e-8648.07Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A835YPT1_9STRA3.200e-2642.86S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A2P6TSJ3_CHLSO1.810e-2548.76Methyltransferase type 11 n=1 Tax=Chlorella soroki... [more]
A0A2P6TIN7_CHLSO5.450e-2533.48Methyltransferase type 11 n=1 Tax=Chlorella soroki... [more]
A0A7S0N8Q2_9CHLO3.140e-2329.26Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A5J4Y136_9CHLO1.280e-2232.42Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A2P6VE33_9CHLO4.050e-2131.62Methyltransferase type 11 n=1 Tax=Micractinium con... [more]
A0A7S0VV22_9CRYP7.860e-1739.32Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7C3NYH6_9CHLR2.770e-1534.92Methyltransferase domain-containing protein n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1454contigH-canaliculatus_F_contig1454:9281..14649 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score400.6
Seed ortholog evalue6.8e-109
Seed eggNOG ortholog2880.D8LCM6
EggNOG free text desc.ubiE/COQ5 methyltransferase family
EggNOG OGs2CZJF@1,2SANJ@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionMethyltransferase type 11
Ec32 orthologEc-03_002320.1
Exons8
Model size945
Cds size945
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1454.3513.1prot_H-canaliculatus_F_contig1454.3513.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1454 9281..14649 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929204.7108014-CDS-H-canaliculatus_F_contig1454:9280..94781622929204.7108014-CDS-H-canaliculatus_F_contig1454:9280..9478Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1454 9281..9478 -
1696845716.7888095-CDS-H-canaliculatus_F_contig1454:9280..94781696845716.7888095-CDS-H-canaliculatus_F_contig1454:9280..9478Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1454 9281..9478 -
1622929204.72372-CDS-H-canaliculatus_F_contig1454:9769..98831622929204.72372-CDS-H-canaliculatus_F_contig1454:9769..9883Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1454 9770..9883 -
1696845716.8023627-CDS-H-canaliculatus_F_contig1454:9769..98831696845716.8023627-CDS-H-canaliculatus_F_contig1454:9769..9883Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1454 9770..9883 -
1622929204.7356741-CDS-H-canaliculatus_F_contig1454:10934..110051622929204.7356741-CDS-H-canaliculatus_F_contig1454:10934..11005Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1454 10935..11005 -
1696845716.812923-CDS-H-canaliculatus_F_contig1454:10934..110051696845716.812923-CDS-H-canaliculatus_F_contig1454:10934..11005Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1454 10935..11005 -
1622929204.746636-CDS-H-canaliculatus_F_contig1454:11511..116231622929204.746636-CDS-H-canaliculatus_F_contig1454:11511..11623Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1454 11512..11623 -
1696845716.8230832-CDS-H-canaliculatus_F_contig1454:11511..116231696845716.8230832-CDS-H-canaliculatus_F_contig1454:11511..11623Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1454 11512..11623 -
1622929204.7587337-CDS-H-canaliculatus_F_contig1454:12310..124581622929204.7587337-CDS-H-canaliculatus_F_contig1454:12310..12458Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1454 12311..12458 -
1696845716.8325362-CDS-H-canaliculatus_F_contig1454:12310..124581696845716.8325362-CDS-H-canaliculatus_F_contig1454:12310..12458Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1454 12311..12458 -
1622929204.7696965-CDS-H-canaliculatus_F_contig1454:13262..133241622929204.7696965-CDS-H-canaliculatus_F_contig1454:13262..13324Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1454 13263..13324 -
1696845716.8440273-CDS-H-canaliculatus_F_contig1454:13262..133241696845716.8440273-CDS-H-canaliculatus_F_contig1454:13262..13324Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1454 13263..13324 -
1622929204.7826698-CDS-H-canaliculatus_F_contig1454:13729..138041622929204.7826698-CDS-H-canaliculatus_F_contig1454:13729..13804Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1454 13730..13804 -
1696845716.8630779-CDS-H-canaliculatus_F_contig1454:13729..138041696845716.8630779-CDS-H-canaliculatus_F_contig1454:13729..13804Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1454 13730..13804 -
1622929204.7933917-CDS-H-canaliculatus_F_contig1454:14484..146491622929204.7933917-CDS-H-canaliculatus_F_contig1454:14484..14649Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1454 14485..14649 -
1696845716.8754933-CDS-H-canaliculatus_F_contig1454:14484..146491696845716.8754933-CDS-H-canaliculatus_F_contig1454:14484..14649Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1454 14485..14649 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1454.3513.1

>prot_H-canaliculatus_F_contig1454.3513.1 ID=prot_H-canaliculatus_F_contig1454.3513.1|Name=mRNA_H-canaliculatus_F_contig1454.3513.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=315bp
QAKINSAWNATAKEYVGNIQDKGGVADGNSSPSNVTLDMSVGYKLAARIV
APSNKLEESGSPVVLDVASAGGEPAITIAKLLPDATIHATDFAPAMMDLI
KQRAAEAGVSNVSASVADGEALTGFGDESVDAVTCTFGMIFMPNWQQAVK
EFSRVLRSNGVVAVTLWEKHEDCIFDRLHRVLDTLVPGYEGVIDPMSLGD
DKGSPVADEMKAAGLHDVSVSEFSVPLVLAPEARVGDIWEYYTASSPLGQ
SLSTLEAKGRTNVRQEARDIFESHMEEDWAEGRTPLGLPKNAEDGPRVIY
TRALLVVGRKCGGG*
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mRNA from alignment at H-canaliculatus_F_contig1454:9281..14649-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1454.3513.1 ID=mRNA_H-canaliculatus_F_contig1454.3513.1|Name=mRNA_H-canaliculatus_F_contig1454.3513.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5369bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1454:9281..14649- (Hapterophycus canaliculatus Oshoro5f female)
CAGGCGAAGATCAATTCTGCGTGGAACGCCACCGCAAAGGAGTACGTGGG
CAACATCCAGGACAAAGGAGGCGTCGCGGATGGAAATTCTTCTCCTTCGA
ACGTGACCCTCGACATGTCGGTCGGGTACAAGCTTGCCGCTAGGATCGTG
GCCCCCTCGAACAAGGTGCGGGCTAGGAATGCTTTTCACGAGCGATCGAC
TCGCGCCACTGCACGTGCGTCTAGTTGCTTCATGGTTGTTTGTTGCTGAA
AGTTGCTGGAGACGTGCTGCAGCGCGAAGTGGTGGTGGTGTTGATAGCGG
TCTAGGGGTTCGGTGTGGTGTGTTTAGCCGCTGCTGCTACTGCTGCAGCG
TTGCGAGGGGATCGCCATCAGGTGTGATGGGACGTGGCAGTCAAGGGCGA
CGCACGGGGGTCCGGTCGAAGGCGCTTCCGTTTGTCAACTCCACGAGACC
GACGGCATGGCAGGAGAGAAAGATATACAGAAGCAGGCATGGAAGCGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGAAGGAGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGAGGGAGAGAAAG
AGAGAGAGAGATAGATAGAGAGGAAGCTGGAGAGATAACATGCCAGGGCC
AGGGCCAGGGCACTCGAGCAATTGGAGAGTCTCATGACTGCTCGAATGGA
ACACGTTTGCCAATCAGCACCAATCAAATCCAGTATGAGCGATGCCCAGA
CCAAAGAAAAACATAACACCAGGCGACATGTCATGCCGTTCCTCATGCGG
GATGTCACGCCTGTCCTAATTTGTGTGTCGCGATTGCGGGTCCAGCTCGA
GGAGTCAGGATCACCAGTTGTGCTCGATGTCGCCTCTGCCGGTGGAGAAC
CGGCGATCACCATCGCAAAGGTGCGCAAGTGTTTCTCCGAATGTTTTGTC
GACTGTTGGGGATGATTGCGAATCGATGCGATCCGCTGGCTTGTCATGTG
GCAAGGCGTGGCGCGGTGTGATCCTATCGAGCACCGAATGATATCGGATG
GAACAGCATCAGGTACAGGAGTTGCTTTGGTCGGCCATTACGTGGCGCGC
CATGCTGTGCAGTAGGATCAGAAGCAATTCGGCCAGGTTGCGTTGTAGGT
TTCCATTGACGGTCCGGTCTGTTGCAGACGGTATATTTGGTGCGCGACTT
GGGGGAAAATTTTCATCCGTATATGCATTTGTCAGTACCAAATTATCAAA
TTATACCTTTACATCTGGATGGAGCTCTTCATCACCGTCGTCATCTTCCC
CCCTCCCTTCTTGCCAATGCGTCAGTTACTCCCTGACGCGACGATTCACG
CCACCGATTTTGCTCCAGCGATGATGGACCTCATCAAGTGAGCAAGCGTG
TTTTGCTATTTGTGGTGCTGTAGACCAAGCTCTTCGCTTTTTGTATACTC
CCTTTCCGTAGTGGGCACTTGAGCGTCGAACGCAACGAGTCGCTGCCTCA
GCACATGCATTCGCGTCTTGTGTGTTGCCTGTCTTCGCATCAGTCTGCCG
GTCGGTTTGCCTACCTTAATGGAGATTGATGCGGCGGGTATAGTCGGGGC
TAAAGTGATCAGCACCATATGATGGACGAGAAGTGACGGCGTATCTCGTT
GCCTATACGGACCGTGGGGATACGGACGCTCAGAGAGTGCGCGGCCAAGG
GTCGAACCGTTACAATCAGCGTGTTGCCCTTCGGGGTCCATCAAAAGTTG
TTGTGCAATGGTTTTGCTGCTGTTGGTGATGGTGTTGGGGTATGAAGGGA
GTGGTTGCACCGACGATACTGGTTCAAATTTCCTGTACTTGAAAAAAGAA
AAAACATGCATTTGGTGTCCTGCAGCGCGCACTCGAGACGGCAAGGAGAT
GGGGACCGAGCGAATATGAATGAAGAGTCCGTTTCCCTTCAGGAAGGTCT
CTTTCGAAGTAAGGCAGCCTTTTATCAGGTTCGATCTTGGTAATGGGTTG
AGGATGTACAACAATCGATTGGACGGCAAGGGACTTGCTTCATGCAAAAT
AGTTGCTTCATGGCAGCAAAAACTTGTACGCACTTCATTCAGGAGAAGAG
CACACGCATAGAGGGAGGTGCTTACCGGCCAGCCTCTCTTTCCTTTTCGT
CTCCCCTTGTTCTACGTTATAAACAATTTGGACATGTTCAGGCAAAGAGC
CGCTGAAGCTGGGGTTTCCAACGTCTCGGCGAGTGTGGCAGACGGGGAAG
CGCTCACGGGGTTCGGGGACGAGTCGGTGGACGCGGTGACCTGCACTTTT
GGCATGATTTTTATGCCGAATTGGCAACAGGCTGTCAAGGTACTGCAGTT
TGTCAGTGATCGTGCCTTCGACAGCACTAAGTCGGGTAGGGTGCGGCGAG
AATCCACGTTCAGACCTCCGTTTCACTTGCAGTTCACTATGTGAAAAACT
TCGTTATGTCGCAATTATTCGGGGGGTTGGCGAAGGTGCCTAATCTTCTG
GGGTTGTGCTTGGTTTGTTGACGCTAACACCTCGCACACGTCATCCCGAC
CTCGCTTGCAGCAAGGAAAAGTTGTAGGTACTAAAGCAGCCATTTACAGC
TCTAATGTTTGCGTTATCCGTCCGAGAAATAAGTTGAAAGCACGAACTGT
ACGAACGCGAATGCTCGATTCCAGGTCTACCGTCGCGTCATTTCATACGA
CCCATTACTATAGCTGGTAGCTCGAGGAATTGCCTCTATGTTAATTGGTG
TTTCAAGTTTATACTTCCGAGTAGAAGACAACCCACTCAAGTCGAAGGAG
CGCCAATCGATCCTCTCGCGCTCATTTTTCAACTGTCGCTGCACCCCCCA
AAACCCCATCTCTCCCCTGCCTTCGCGGACAGTTGCCGTGTCCCCAAGTC
ACATCATACCTCCGGTACTTCCCAAGTGGCGCGCTTCCGTTATCGATCGA
TCGAGGAGTCCGCCGAAGCCCCTCTCTCACGCATTTTTGGTGTTGCTCTC
TTCCTTCCTCTTTTTGTCCCACGAAGGAATTCTCCCGCGTGCTGAGGAGC
AACGGCGTGGTAGCGGTGACGCTGTGGGAGAAACACGAGGACTGCATCTT
CGACCGCCTCCACCGAGTGCTTGACACTCTCGTCCCAGGTATCGTGCACG
ATTGGGTGCGAGCAAGTGTGTCGGCCGATGGCCAGCTAAATTGTGTGTGC
CCCTGCTGCCAAACATCACTGCAAGTTGTCGGTCGATTCTTGTTCACTAT
CCTTTTTGCGGCGTATCATCAACCGTTTTCGTACGTTGCGAAGAACGCAT
GCGTGATTGGGGTTCAATTTTAATTTACACTCCTTCGCGCTAGATGTTCG
GTTGTTTCAGCCTTACCAGGGAGAGGCATTTGTCCTAGGCTTCTCTCGGA
CCGATGAAGGATCAGAGGCGGAGTAGCTGCTACCTAGCCCGAGGAATGTC
GCGCTTATCGCGTCTTTTCTATTGCGTGCTATTATTTCGCCGCAGTTTGC
TTGTATCGCTCGTGCGGATTGACTTCCGGTGGCCCTCTGATGTTCCTGTT
GATGTTCGCTAGGTTGTCGCTAAGTCCGTTCGTTGTTGTTCCTGTTTGCT
CCTTGTGTTGGCCCCGTCGTCGATCGGTGCCATTTCCCCGGCAGGCTATG
AAGGAGTGATCGACCCGATGTCTCTCGGCGACGACAAAGGATCGCCCGTA
GCAGACGAAATGAAGGTATGTCTCTTGTTGTTATTTATGCTGCTGCTGGT
ACTGCTGCTGGTACTGCTGCTGGTGCTGCTGCTGCTGCTGCTGCTGCTGT
TGTTGTTGTTGTTGTTGTTGTTGTTATTGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTGACTTTATCTGTCTTCGTCATCGTGCGTCTCTGCGTTAGT
GCAGTGGAAGTGATCAGTCACCACCCCACTGAGTCCATGTTCTCGACCGG
TGCCTGTTTCGGCAAGCAGGCCACTCCCGTTGTCACGTGAAGAGCATATG
TGCTTTCCTAGTCCAAAGCAAACAACATGCTTTGCTATGAAACACAGATA
GCAACTCCCGTGGACAGAGATGGCGGCAACGAACCGAAGCATCGCTCTGC
ACGGAACCATGCAGACGACGTTCACGGAACCACGCAGACGACGTTGTGGA
GGGTGCCAAAGCGTCTGGGTTGTGTCTGTTAATGTTCCTGAGGTTCCACA
CCCTGAAGCAACCACATCTTTTTCTGAGCAGTGCGATCAAGGTCGTTTGT
TCAGAGGGCCCTGAAATGTGCTCCAAGGCTCTGCGGGCGATTCATGCGGT
GTGATTTCGGCCGGCTTCACACCGTCCGACAACCGAATGTTGCCCCCCTC
CCCCTTTTCCTTTCTAGCCGTCCCCCATGGGACTGTTGGAGTGTTTAGAA
GTGTCCGGATTAGGCGCAACGGCCCTCCCCCGATATCGTTCGTGAATATC
GACCGGATGCCGAATTTACTCTCATCGCTTCGTGCGCCGTTGGCCTCCTC
GTGGTCTCCATGTCCTCTGCATACCTTCTTCATGCACCATACAGCGGCAC
GTCTTTCTGGGCAAATGGTGGCGGGTAGGTGTTGTTTGAGGCCTGAACCC
ACTGCGAGCGACGAGCAAAAGTTGCAAAGAGGAGGGTAAAAGCCTTCCTT
CGCGCTCCCAACCACGCCCCCCCCCCCCCCACCCACCCACCCCCTTCGAC
CAGCACAAACGCCCACCTCACCACTCCGGTACTCCCTTTCGCTATTTTCC
TCTGCGCGTATGTCAGGCTGCGGGGTTGCACGACGTCTCGGTGTCGGAGT
TCTCTGTACCGCTGGTTCTCGCACCCGAAGCGCGTGTGGGAGACATCTGG
GAGTACTACACGGCCTCGTCGCCGCTGGGGGTGAGAGGGAGCGAGGGCGA
GGGCGACGGTGCTCTTTGTTGCTATGTTGCTGACGTCTTGTAAGGGGTAG
AGGCCAAGCACTACGTGCCGAGTGCGCACATACTCACGCACCTTTCAAGC
GCCGTGACGATGCCGTTGATGCTTGTTGCCGGGGGCACGGTGTCTCCTTT
TCTGCTGGGGCAAATAACAAGCTGCGTTGAGGGGAAGAAAGAGCCGCACG
CGAGTCCCAAGACACTGCCACAACGCACCGCTTGCCCCCACCCCTCCAAA
TCGCGAACGCAATACAAACAGCAAAGCTTGTCCACTCTAGAGGCCAAGGG
GCGAACAAACGTCCGCCAAGAAGCCCGAGACATTTTCGAGAGTCACATGG
AAGAGGACTGGGCCGAAGGACGAACGCCTCTCGGTCTCCCGAAGAACGCG
GAGGACGGGCCTCGCGTCATCTACACGCGGGCTCTCTTGGTGGTGGGACG
TAAGTGTGGCGGCGGGTGA
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1454:9281..14649-

>mRNA_H-canaliculatus_F_contig1454.3513.1 ID=mRNA_H-canaliculatus_F_contig1454.3513.1|Name=mRNA_H-canaliculatus_F_contig1454.3513.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1890bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1454:9281..14649- (Hapterophycus canaliculatus Oshoro5f female)
CAGGCGAAGATCAATTCTGCGTGGAACGCCACCGCAAAGGAGTACGTGGG
CAACATCCAGGACAAAGGAGGCGTCGCGGATGGAAATTCTTCTCCTTCGA
ACGTGACCCTCGACATGTCGGTCGGGTACAAGCTTGCCGCTAGGATCGTG
GCCCCCTCGAACAAGCAGGCGAAGATCAATTCTGCGTGGAACGCCACCGC
AAAGGAGTACGTGGGCAACATCCAGGACAAAGGAGGCGTCGCGGATGGAA
ATTCTTCTCCTTCGAACGTGACCCTCGACATGTCGGTCGGGTACAAGCTT
GCCGCTAGGATCGTGGCCCCCTCGAACAAGCTCGAGGAGTCAGGATCACC
AGTTGTGCTCGATGTCGCCTCTGCCGGTGGAGAACCGGCGATCACCATCG
CAAAGCTCGAGGAGTCAGGATCACCAGTTGTGCTCGATGTCGCCTCTGCC
GGTGGAGAACCGGCGATCACCATCGCAAAGTTACTCCCTGACGCGACGAT
TCACGCCACCGATTTTGCTCCAGCGATGATGGACCTCATCAATTACTCCC
TGACGCGACGATTCACGCCACCGATTTTGCTCCAGCGATGATGGACCTCA
TCAAGCAAAGAGCCGCTGAAGCTGGGGTTTCCAACGTCTCGGCGAGTGTG
GCAGACGGGGAAGCGCTCACGGGGTTCGGGGACGAGTCGGTGGACGCGGT
GACCTGCACTTTTGGCATGATTTTTATGCCGAATTGGCAACAGGCTGTCA
AGGCAAAGAGCCGCTGAAGCTGGGGTTTCCAACGTCTCGGCGAGTGTGGC
AGACGGGGAAGCGCTCACGGGGTTCGGGGACGAGTCGGTGGACGCGGTGA
CCTGCACTTTTGGCATGATTTTTATGCCGAATTGGCAACAGGCTGTCAAG
GAATTCTCCCGCGTGCTGAGGAGCAACGGCGTGGTAGCGGTGACGCTGTG
GGAGAAACACGAGGACTGCATCTTCGACCGCCTCCACCGAGTGCTTGACA
CTCTCGTCCCAGGAATTCTCCCGCGTGCTGAGGAGCAACGGCGTGGTAGC
GGTGACGCTGTGGGAGAAACACGAGGACTGCATCTTCGACCGCCTCCACC
GAGTGCTTGACACTCTCGTCCCAGGCTATGAAGGAGTGATCGACCCGATG
TCTCTCGGCGACGACAAAGGATCGCCCGTAGCAGACGAAATGAAGGCTAT
GAAGGAGTGATCGACCCGATGTCTCTCGGCGACGACAAAGGATCGCCCGT
AGCAGACGAAATGAAGGCTGCGGGGTTGCACGACGTCTCGGTGTCGGAGT
TCTCTGTACCGCTGGTTCTCGCACCCGAAGCGCGTGTGGGAGACATCTGG
GAGTACTACACGGCCTCGTCGCCGCTGGGGGCTGCGGGGTTGCACGACGT
CTCGGTGTCGGAGTTCTCTGTACCGCTGGTTCTCGCACCCGAAGCGCGTG
TGGGAGACATCTGGGAGTACTACACGGCCTCGTCGCCGCTGGGGCAAAGC
TTGTCCACTCTAGAGGCCAAGGGGCGAACAAACGTCCGCCAAGAAGCCCG
AGACATTTTCGAGAGTCACATGGAAGAGGACTGGGCCGAAGGACGAACGC
CTCTCGGTCTCCCGAAGAACGCGGAGGACGGGCCTCGCGTCATCTACACG
CGGGCTCTCTTGGTGGTGGGACGTAAGTGTGGCGGCGGGTGACAAAGCTT
GTCCACTCTAGAGGCCAAGGGGCGAACAAACGTCCGCCAAGAAGCCCGAG
ACATTTTCGAGAGTCACATGGAAGAGGACTGGGCCGAAGGACGAACGCCT
CTCGGTCTCCCGAAGAACGCGGAGGACGGGCCTCGCGTCATCTACACGCG
GGCTCTCTTGGTGGTGGGACGTAAGTGTGGCGGCGGGTGA
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