mRNA_H-canaliculatus_F_contig1453.3506.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1453.3506.1 vs. uniprot
Match: D8LF01_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF01_ECTSI) HSP 1 Score: 2110 bits (5466), Expect = 0.000e+0 Identity = 1195/1851 (64.56%), Postives = 1364/1851 (73.69%), Query Frame = 1
Query: 10 DSLEHGIARSQAREARESHRAGRDAPSYHLGGPPEPWETAIGDTGERVSRQGRTVVEYAENMNALGINERSLAGDNNPIADHVSSLGQDKMRLLPGVPVGPTHVAGDLGGDVAETGVIAEEDDDAVSVSSDWSNMSDENEAAPCQAQNIATAATATDGLDV-EVDDEPSNDMDLIDDPDIRNAVEDFDSRNWTMEQLEVSCQTLLEECYASEERRRRLLSAGMLLKLVEIYPSALRYTYPRWMAQYRELPGPIAAHKRMTLLMQGSALRARWRRVKANKKHGSLPPSLLHAYLCIILALIDAETCPKFCRMNRVKVVGACGLLALGVHFKTGDRSQRLACRILRELAREPLLIYELLNAGVAEYLSRLLPKLREASIDRLLEALDAVDSMAFSAMRFCELSYANPNRGEGNSALVAALVADGSSIGGLESEIRVPSGDKLATTVCYHSVLQEILAYAGRALELLVQGLQSQEEIVPDMSLALFLQLCSRQEGRDGIEATDGVGMLRQLISGAQAQDSPIFLRGLTCALAVARPGVPGSPPGSTGEGTTPSATAPPGLSLPMAGGVGRSGPARPHPLDFEGKLYNDLVDMLDAPPPAPLRAVRGLVRMGSLEAVMRFLVREDDEDGVHPDDSKSVSVXXXXXXXXXXXTESSSRRP----RGPHFFRLKQRHACLGAVALHGFAVLAGPHPAITTGPTLRYLCYSIQVTYIDLTVGKLAPGVECPLMFRSIQLACRALAFLATSDEIGAVTSDSRPEEGGPVECV-GQREEGERDGAV--DHGLLRRVADSLLSTTAINEVACLAQMPSRAAWTGDDGVMYRHLERTVSSAAILIAGVCPVPAGERDPFTRFDEPEDETSSLRLCQPLMERLVTSVGGPLCSTLLMAESLETISHTCRALAKLSDSNTTIQMLLDDHDIMKALIRLGPRAPAVLPVATILGEEETVPKEGFSPRRPARTHGAEATHAVGGAN---ATLAKSGTLENRPKRSFDENAKSSTKQDREPRAAVSVEGDGVAQDGPRQSGGDRLSVEHGKEWTGGLRNVCHDG-SAGQFPWMGYPVREGELADASTRKLCSLPFDYFRVVANVARVPSGRAIVQSSGTLKRCLERFALSVSDCPAAQLATLRCRSEICVLIGRMAGTYDRKTGAANEFILHPRYQTPRVLIGMLASPDGHGRHFGASRANTELALHNAAYALAEICRDTLRSVPLVAEAGGIHLACRVANNVASPMPLLKQVLRILQGAGSFPDGVYAPFIADPAVLRSLNRIANNAYPGFRPATMNSGEARQSLSKSAERNEEKSQTMPPVGSGGVEKIGGRYNHSPAMAFNLLKPRSPEARLISELATEVAYLVGAHATK-SSPRTSISPPRQQGSLPLTKQHH---------TRHSTDHGPEA--ERIQAPARRSLIASETENLNAGGDKPQ-GKATAPLAPAGRSGPGTISGRPGTYLGCGVSSCKGLGFGGEHGHVAGNLPHAAFVLRKAEEGESGVDDRSDRVTRNNDHEEKSRDALGERRTSGETRDKGFTGESGADS-----------SIAGSPGVVVATPLALLNAREASFRNELIRRKEHYGLGGTRKKGVADDDNENREGPLQAPATYAQDDQACIGPSAPIQCGGPFDTPGRSRTSSTKGCIPLATAVDVAQSPLMATTRPTEKQPVSASRRDPKRDRTNYP-RDAAARPDQQYTCASSGSQSVSPKGKEFVTFARPAAHWSVTKSLGAKSGQSRIKGIRVPGAPEEGSAGVVGRFSCRGYLLDPTFTDHNPVILHPRLPHVGEEGG-SFRQFPEDLTLGALEALREGSGGAQHVEKYRNVVEVLRHNVEVLGGRQVAEQGCFD 5448
D+L+ +AR+QAREARES RA + SYHLGGPPEPWETA+GDTGERV RQGRTVVEYA MNA+GINE+SLAG NNPIADHV+++GQDKMRLL PV GDLGG + +AEE++DAVSVSS WS SDE+ AAP QAQ + A A G D E +D + +DLIDDPDIRNAVEDFDSRNWTM+QLEVSCQTLLEECYASE+RRRRLLSAGML KLVEIYPSALRYT+PRW+AQYRELPG IA HKRMTLLMQG+ LR RWRR+ A++KHGSLPPSLLHAYLCIILALID +TCP+FCRMNRVKVVG GLLAL VHFK GDRSQRLACRILRELAREPLLIYELLNAGVAEYLSRLLPKLRE SIDRLLEALDAVDSMAFSAMRFC+L ANP+RG+GNSAL+AALVADGSSIGGLESEIR+P G+KLATTVCYHSVLQE+LAYAGRALELLVQG+QSQEEI PDMSLALFLQLCSRQEGRDGIEATDG+ MLR LISGAQAQ+SP+FLRGL CA+A+AR G PGS PGSTGEG TPSATAPPGLSLP AGGVGRSGP +PHPLDFEGKLY+DLV +LDAPPPAPL AVRGLVRMGSLEAVMRFLVREDD + DD +SVS+ T + R+P GPH+FRLKQRHACLGAVALHG AVLAGPHPAI TGPTLRYLCYSIQ+ YIDLTVG LAPGV+ PLMFRSIQLACRALAFLATS GA E V+ GQ E+ + +V DHG LRRVADSLLSTTAINEVACLAQMPSRAAW GD+G MYRHLERTVSSAAIL+AGVCPVPAGERDPFTRFDEPEDE+ SL+LCQPLMERLVT+VGG LCSTL++AESLE I+H CRALAKLSD+NTT+QMLLD HD+MKA+IRLGPRAPAVLPVA EE FSP R AR++ E +T+ G E A+++ + RE ++V+ EG ++ PR+ G DR+ G++ GG C DG SA Q P GY VREGE+ADASTRKLCSLPFDYFR+VAN+ARVPSGRA+VQSSGTLKRCLER AL VS CPAA+LATLRCRSEICVLIGRMAGTYDRKTGAANEFILHPRYQT VL+GMLA+P H R FGA+R + ELA HNAAYAL IC DT+RSVP+VA+AGGIHLAC VAN+V SPMPLLKQVLRIL GAGSFPDGVYA IA+P VLRSLNRIANNAYPGFRP T + ++R + S SA + + + M P G G K+ R + LKPRS E+RLIS+LATEVAYLVGA A K SPR SPP + S + QH T +T+ E +R++A + + + +GG + GK + L+ + +SG+PGTY GCGV+SCKGLGF GEHG +AGN PHAAFV+R + G+ G + + + + +R E GA+S PGVV ATPLALL+AREASFR+ELI RKEHY LGGTRKKGV E G LQA AT + G + G + RS++S+ K VD+ QSPL+A+TRPT P S R P+RD+ + R R + T S G++ +P GKEFVTFARPAAHWSVT SL A G++R KG+R+P + E G GVVGRF+ RGYLLDPTF DHNPVILHPRLP +G G F Q P+ TL L GGA+ E YRN VEVLRH V V G R+ +Q CFD
Sbjct: 3 DTLDDAVARAQAREARESLRANQHVQSYHLGGPPEPWETALGDTGERVGRQGRTVVEYAAKMNAMGINEKSLAGQNNPIADHVATMGQDKMRLLSSNPVVHAPTMGDLGG-APTSDAVAEEEEDAVSVSSGWSEDSDESTAAPSQAQRDSATAAAASGRDSGESEDVSCDGLDLIDDPDIRNAVEDFDSRNWTMDQLEVSCQTLLEECYASEDRRRRLLSAGMLRKLVEIYPSALRYTFPRWIAQYRELPGAIATHKRMTLLMQGAELRTRWRRINADEKHGSLPPSLLHAYLCIILALIDTDTCPRFCRMNRVKVVGGGGLLALSVHFKAGDRSQRLACRILRELAREPLLIYELLNAGVAEYLSRLLPKLRETSIDRLLEALDAVDSMAFSAMRFCKLRSANPSRGQGNSALIAALVADGSSIGGLESEIRLPDGNKLATTVCYHSVLQEMLAYAGRALELLVQGVQSQEEIAPDMSLALFLQLCSRQEGRDGIEATDGMAMLRPLISGAQAQNSPVFLRGLACAVAIARQGAPGSAPGSTGEGATPSATAPPGLSLPKAGGVGRSGPPKPHPLDFEGKLYDDLVGILDAPPPAPLNAVRGLVRMGSLEAVMRFLVREDDGEEYGTDDDESVSLSGGGG------TGRTRRKPDGRSSGPHYFRLKQRHACLGAVALHGLAVLAGPHPAIMTGPTLRYLCYSIQIAYIDLTVGTLAPGVDYPLMFRSIQLACRALAFLATSGATGAPPLGDGQRENVTVDVGRGQAEDAQDSSSVIVDHGPLRRVADSLLSTTAINEVACLAQMPSRAAWAGDEGHMYRHLERTVSSAAILVAGVCPVPAGERDPFTRFDEPEDESLSLQLCQPLMERLVTTVGGSLCSTLMVAESLEIIAHACRALAKLSDANTTVQMLLDTHDVMKAVIRLGPRAPAVLPVAAHSEREEARRGGSFSPSRSARSNHGEGRLLPASPEPPKSTINPGG-----------EQAQTTATETRE--SSVASEG---GENKPRRRG-DRV----GRKGFGG----CSDGHSAPQPPCSGYGVREGEMADASTRKLCSLPFDYFRLVANIARVPSGRAVVQSSGTLKRCLERLALDVSGCPAARLATLRCRSEICVLIGRMAGTYDRKTGAANEFILHPRYQTLTVLLGMLATPAEHRRLFGATRVHIELARHNAAYALGAICTDTVRSVPMVADAGGIHLACSVANDVNSPMPLLKQVLRILHGAGSFPDGVYASLIAEPPVLRSLNRIANNAYPGFRPETTSGRDSRPTSSASARKGAQTAPAMKPRGDGAGGKVDARERMPVNSMPSFLKPRSAESRLISDLATEVAYLVGARANKCGSPRIPASPPGPEESA-MAGQHQKARFLAPKDTAEATEARLETGQKRVEAEGNHLSLTNPAAAVESGGGHARIGKTSHSLSTSTTPADKAVSGKPGTYSGCGVTSCKGLGFTGEHGDIAGNTPHAAFVVRNDDRGKRGGESEAYGTAKKQTPVVHLGSDNAGAQVHNSSRGSIAEAEPGAESIAEEXXXXXXXXXXXXPGVVTATPLALLSAREASFRDELIHRKEHYSLGGTRKKGVGQGKEEGG-GSLQALATVERPG----GMPEAGKRGRSIEASRRSQSSNRKLRGRSPAPVDIVQSPLIASTRPTGFPPGSECRPGPERDKADRGCRHGVDRQEPVKTALSFGTK-CAPGGKEFVTFARPAAHWSVTNSLSASPGRTRSKGVRIPNSTEAGGVGVVGRFASRGYLLDPTFQDHNPVILHPRLPLIGGGAGRGFSQVPDGSTLAELVTSPAAKGGAKGTEPYRNSVEVLRHRVGVSGERKAGKQSCFD 1814 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1453.3506.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1453.3506.1 >prot_H-canaliculatus_F_contig1453.3506.1 ID=prot_H-canaliculatus_F_contig1453.3506.1|Name=mRNA_H-canaliculatus_F_contig1453.3506.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=1817bp MNKDSLEHGIARSQAREARESHRAGRDAPSYHLGGPPEPWETAIGDTGERback to top mRNA from alignment at H-canaliculatus_F_contig1453:10230..21527- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1453.3506.1 ID=mRNA_H-canaliculatus_F_contig1453.3506.1|Name=mRNA_H-canaliculatus_F_contig1453.3506.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=11298bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1453:10230..21527- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1453:10230..21527- >mRNA_H-canaliculatus_F_contig1453.3506.1 ID=mRNA_H-canaliculatus_F_contig1453.3506.1|Name=mRNA_H-canaliculatus_F_contig1453.3506.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=10902bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1453:10230..21527- (Hapterophycus canaliculatus Oshoro5f female)back to top |