mRNA_H-canaliculatus_F_contig1452.3502.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1452.3502.1 vs. uniprot
Match: D7FXJ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXJ5_ECTSI) HSP 1 Score: 350 bits (899), Expect = 4.340e-118 Identity = 162/237 (68.35%), Postives = 208/237 (87.76%), Query Frame = 1
Query: 1 QGILFFGYGSDAPTAEHYLEQAVTSARRIKLLNPATNVSVVTNPGVTKADLDGVFDMVINIDEEYLYEGREQAWGPKGVSRQWMTRLEYLTRSPYEVTLALDSQALCCSTDVNEVLKQLRWEEFDVAFAVQGPKMLGPHNWAIMYRMNFNTRRMFKRWQSLQVDYARSGSDQLTLHMAAGSLMLQGKLNVGVLSQSVAMATVPYSRSGPEYPKTSTIIDPRTVHFVHYDAESREDEE 711
QG+LFF YGS+ TAEHYLEQ + SARRIK LNP+TN++VVTNPG+ + +++GVFD+V++++E++LY G++Q+WGPKG++RQW TRLEY++RSPYEVTLALDSQALCC T V ++L + EEFD+AFAVQGP+MLGPHNWAI+YR+N TRR+F RW+SLQ+ YARSGSDQLTLHMAAGSL L+G+LNVGVL+Q+ A+ATV Y+R+ E+PKTST++DPR VHFVHYDA+S ED E
Sbjct: 34 QGVLFFAYGSETSTAEHYLEQVLVSARRIKSLNPSTNITVVTNPGI-RPEVEGVFDVVVHVEEKHLYRGKQQSWGPKGLARQWFTRLEYISRSPYEVTLALDSQALCCGTSVEDILTE-GGEEFDIAFAVQGPRMLGPHNWAILYRLNDRTRRLFDRWKSLQLAYARSGSDQLTLHMAAGSLALKGELNVGVLAQNAALATVIYNRTVAEFPKTSTLVDPRPVHFVHYDAQSHEDAE 268
BLAST of mRNA_H-canaliculatus_F_contig1452.3502.1 vs. uniprot
Match: D8LTZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTZ7_ECTSI) HSP 1 Score: 297 bits (761), Expect = 5.150e-97 Identity = 149/275 (54.18%), Postives = 193/275 (70.18%), Query Frame = 1
Query: 1 QGILFFGYGSDAPTAEHYLEQAVTSARRIKLLNPATNVSVVTNPGVTKADLDGVFDMVINIDEEYLYEGREQAWGPKGVSRQWMTRLEYLTRSPYEVTLALDSQALCCSTDVNEVLKQLRWEEFDVAFAVQGPKMLGPHNWAIMYRMNFNTRRMFKRWQSLQVDYARSGSDQLTLHMAAGSLMLQGKLNVGVLSQSVAMATVPYSRSGPEYPKTSTIIDPRTVHFVHYDAESREDEEKTCEKLNRESDKARMVILPTYFKRNSE-GSRIENIYEL 822
+GILFF YG++ TAEHYL+QA+TSARRIKLLNP+TN+++VTNPG+ + D+DG FD V+N++E+ LY G Q+W P GVSRQW+TRLEYL RSPY Q P +L PHNWAI+YR N NT+R+F RW+ LQ++Y+R+GSDQ TL MAAGSL LQGKLNV V+S+++A+ATV Y+R+ P +PKTS +IDP VHFVHYDA S ED E TC KLNR AR+V++P F ++ E G RIE+ Y++
Sbjct: 35 EGILFFAYGAEITTAEHYLQQAITSARRIKLLNPSTNITLVTNPGM-RPDIDGAFDAVVNVEEKLLYSGTVQSWNPNGVSRQWLTRLEYLARSPY-----------------------------------QNPDLLAPHNWAILYRKNENTKRLFNRWRVLQIEYSRAGSDQQTLEMAAGSLALQGKLNVSVISENLALATVVYNRTVPTFPKTSMLIDPGPVHFVHYDAASDEDAEMTCRKLNRHWSLARVVVMPAPFPKSEETGLRIESNYKV 273
BLAST of mRNA_H-canaliculatus_F_contig1452.3502.1 vs. uniprot
Match: A0A7S0PMJ9_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0PMJ9_MICPS) HSP 1 Score: 109 bits (273), Expect = 1.260e-23 Identity = 73/228 (32.02%), Postives = 109/228 (47.81%), Query Frame = 1
Query: 4 GILFFGYGSDAPTAEHYLEQAVTSARRIKLLNPATNVSVVTNPGVTKADLDGVFDMVINIDEEYLYEGREQAWGPKGVSRQWMTRLEYLTRSPYEVTLALDSQALCCSTDVNEVLKQLRWEEFDVAFAVQG-----PKMLGPHNWAIMYRMNFNTRRMFKRWQSLQVDYARSGSDQLTLHMAAGSLMLQG-KLNVGVLSQSVAMATVPYSRSGPEYPKTSTIIDPRTV 669
G+ FF YGSD T +++ Q + K +P ++V T+ + D D FD I I +++ + G G SRQW+TR+ YLT +P+EVTLA D+ + C + L+ L +FD+A A G P PHN+A+ YR N NT W QV + DQ TL A + + VL+ SVA A V S +P+ + +I + +
Sbjct: 74 GVYFFAYGSDLETFKNFARQVAQAGSLFKKYSPGIPLAVATS--FSYPDFDKYFDHQIRIRQDHNFAGSNYQNRSDGFSRQWLTRILYLTATPFEVTLAYDANVVSCGP-LETTLRTLSRSDFDLAVASVGFRSNLPVDAQPHNFALAYRWNENTAGFLDEWFMTQVSSGVAHDDQHTLLRAVNAYQPRHLDFKFRVLNPSVAAAFVSTKASAGFFPRETRVISGKAL 298
BLAST of mRNA_H-canaliculatus_F_contig1452.3502.1 vs. uniprot
Match: A0A8J6CJX9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CJX9_DIALT) HSP 1 Score: 90.1 bits (222), Expect = 1.420e-16 Identity = 70/246 (28.46%), Postives = 107/246 (43.50%), Query Frame = 1
Query: 4 GILFFGYGSDAPTAEHYLEQAVTSARRIKLLNPATNVSVVTNPGVTKADLDGVFDMVINIDEEYLYEGREQAWGP---------KGVSRQWMTRLEYLTRSPYEVTLALDSQALCCSTDVNEVLKQLRWE------EFDVAFAVQGPKMLGPHNWAIMYRMNFNTRRMFKRWQSLQVDYARSGSDQLTLHMAAGSLMLQGKLNVGVLSQSVAMATVPYSRSGPEYPKTSTIIDPR-----TVHFVH 681
G+L F Y A LE A SARR+K L+P V++ TN + GVFD ++ I++ ++ +G + A G + V Q +TR+ YL RSP+ +TLAL+ A+ C+ V+ L L +FDVA + Q + ++ R N TR + + W ++ + L A + G L LS S V R P +P+ S TV F+H
Sbjct: 72 GVLLFAYAESAQALASRLEAATASARRMKALSPRLRVALATNGEPVR----GVFDHIVAIEQRHVLDGGDPAAGKASESSAPTFRPVESQALTRIYYLARSPFALTLALEGTAIACAGGVDAALHALLDSAAEGEGQFDVAVSTQMQTESSHASTVLLIRANAATRALLRDWFVEHLNSGPTADPAPALARALARALAAGSLRRAALSSSF----VAQVRHAPPWPRDSDGASSADAILGTVSFIH 309
BLAST of mRNA_H-canaliculatus_F_contig1452.3502.1 vs. uniprot
Match: A0A819H895_9BILA (Hypothetical protein n=4 Tax=Adineta steineri TaxID=433720 RepID=A0A819H895_9BILA) HSP 1 Score: 63.2 bits (152), Expect = 1.740e-7 Identity = 77/322 (23.91%), Postives = 134/322 (41.61%), Query Frame = 1
Query: 4 GILFFGYGSDAPTAEHYLEQAVTSARRIKLLNPATNVSVVTNPGVTKADLDGVFDMVINIDEEYLYEGREQAWGPKGVSRQWMTRLEYLTRSPYEVTLALDSQALCCSTDVNEVLKQLRWE-EFDVAFAVQGPKMLGPHNW----------AIMYRMNFNTRRMFKRWQSLQVDYARSGS--DQLTLHMAAGSLMLQGK-LNVGVLSQSVAMATVPYSRSGPEYPKTS---TIIDPRTVHFVHYDAESREDEEKTCEKLNRESDKARMVILPTYFKRNSE------GSRIENIYELVYSEEELATAINAAREGMEYFRGLDW 900
GI++F YGS + YL++ + SA + P ++++++ + D F ++ I +E Y GR QW+TR+E L+ +P+ TLA+DS C T +++ LK ++D AF G HN ++ R T+R+ K W + + DQ++L +A S + L V L S + Y G + T++ V +H A C+ +N ES R +L K +S+ +++ + ++L +S E A +N A R +DW
Sbjct: 44 GIVYFLYGSQ-DQLQKYLKEVLQSAETYWRVEPNISIALISTDPTIIHETDHHFTHIVKIPQEINYSGR-----------QWLTRIESLSLTPFMTTLAVDSDTFAC-TKLSDDLKLAHLSVQYDYAFT-------GYHNHYNKTILMDAGTMLMRWTPGTKRLLKEWAKVHKEQMTKSKQDDQVSLVLALLSAKKRNMTLKVARLDYSYGLRW--YGAKGEGWINRRFEHTMVTHGEVRTIHMRA-MYPSYRLICKIINEESLLTRPRLLTVDRKLHSDLYGKVSETQLRSGFQLAFSTNECAYQLNGAE-----CRDMDW 337 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1452.3502.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1452.3502.1 >prot_H-canaliculatus_F_contig1452.3502.1 ID=prot_H-canaliculatus_F_contig1452.3502.1|Name=mRNA_H-canaliculatus_F_contig1452.3502.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=337bp QGILFFGYGSDAPTAEHYLEQAVTSARRIKLLNPATNVSVVTNPGVTKADback to top mRNA from alignment at H-canaliculatus_F_contig1452:19963..26754+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1452.3502.1 ID=mRNA_H-canaliculatus_F_contig1452.3502.1|Name=mRNA_H-canaliculatus_F_contig1452.3502.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6792bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1452:19963..26754+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1452:19963..26754+ >mRNA_H-canaliculatus_F_contig1452.3502.1 ID=mRNA_H-canaliculatus_F_contig1452.3502.1|Name=mRNA_H-canaliculatus_F_contig1452.3502.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2022bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1452:19963..26754+ (Hapterophycus canaliculatus Oshoro5f female)back to top |