mRNA_H-canaliculatus_F_contig14435.3456.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14435.3456.1 vs. uniprot
Match: D7FZR4_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR4_ECTSI) HSP 1 Score: 348 bits (892), Expect = 3.400e-118 Identity = 177/185 (95.68%), Postives = 178/185 (96.22%), Query Frame = 1
Query: 1 ATALGQSLSIGCNKSLLSLKLDYNPSLGSEGAAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLHLAVLNLQGNRLEAEGTKTLSPGLARNRSLVYLSLADNGIGSGDDDVSALEDFRDGMMSCPTLTHVDLLYNRIGERGARVMLPALEQNRIKHFLVDATLPTPLFEALHRRDAG 555
ATALGQSLSIGCNKSLLSLKLDYNPSLGSEG AALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKL LAVLNLQGNRLEAEGTK LSPGLARNRSLVYLSLADNGIGSGD DV ALEDFRD MMSC TLTHVDLLYNRIGERGARVMLPALEQNRIKHFLVDATLPTPLFEALHRRD+G
Sbjct: 142 ATALGQSLSIGCNKSLLSLKLDYNPSLGSEGTAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLQLAVLNLQGNRLEAEGTKALSPGLARNRSLVYLSLADNGIGSGDADVDALEDFRDAMMSCSTLTHVDLLYNRIGERGARVMLPALEQNRIKHFLVDATLPTPLFEALHRRDSG 326
BLAST of mRNA_H-canaliculatus_F_contig14435.3456.1 vs. uniprot
Match: A0A835YWH7_9STRA (Leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWH7_9STRA) HSP 1 Score: 258 bits (660), Expect = 7.180e-83 Identity = 133/187 (71.12%), Postives = 154/187 (82.35%), Query Frame = 1
Query: 1 ATALGQSLSIGCNKSLLSLKLDYNPSLGSEGAAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLHLAVLNLQGNRLEAEGTKTLSPGLARNRSLVYLSLADNGIGSGDDDVSALEDFRDGMMSCPTLTHVDLLYNRIGERGARVMLPAL--EQNRIKHFLVDATLPTPLFEALHRRDAG 555
A ALGQ+L+ GCN+SLLSLKLDYN +LGSEGA ALCRGLRTN++L+QLHLPYC +G DAGA LGEMLSY+KL LAVLNLQGNRL EG + L+PGLARN S+ YLSLADN IG DV AL FRD +++C TL+HVDLLYNRIG GA +LPAL + +I+ FLVDATLPTPLF+ALHRRDAG
Sbjct: 141 ALALGQALAAGCNRSLLSLKLDYNQTLGSEGARALCRGLRTNATLRQLHLPYCGVGGDAGAALGEMLSYSKLQLAVLNLQGNRLGGEGLRDLAPGLARNGSVTYLSLADNAIGGVARDVEALALFRDAILACTTLSHVDLLYNRIGPDGATTLLPALAPDNAQIRQFLVDATLPTPLFDALHRRDAG 327
BLAST of mRNA_H-canaliculatus_F_contig14435.3456.1 vs. uniprot
Match: A0A8J2X6V8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X6V8_9STRA) HSP 1 Score: 180 bits (457), Expect = 2.500e-52 Identity = 106/197 (53.81%), Postives = 127/197 (64.47%), Query Frame = 1
Query: 1 ATALGQSLSIGCNKSLLSLKLDYNPSLGSEGAAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLHLAVLNLQGNRLEAEGTKTLSPGLARNRSLVYLSLADNGIGSGDDDVSALEDFRDGMMSCPT--LTHVDLLYNRIGERGARVMLPALE----------QNRIKHFLVDATLPTPLFEALHRRDAG 555
A ALGQSL G N+SLL+LKLDYN SLGS+G ALC+GLRTN+SLKQLHL YC L DAGAPLGE+LSY K L L+LQGN++ G + G+ N L YLSLADN I + D+D+ ALE G+M T L+ VDLL+NRIGE+GA ML A +I+ VD +LP LF L R DAG
Sbjct: 143 AHALGQSLMCGQNRSLLTLKLDYNSSLGSDGCKALCQGLRTNASLKQLHLCYCGLDEDAGAPLGEVLSYAKTTLQKLHLQGNKMRGGGLSGILSGMDNNNKLEYLSLADNAIAATDEDLEALEQLA-GVMQRETSLLSQVDLLHNRIGEKGANTMLAAFNGGELEGSKGPPGKIQMLQVDHSLPDQLFNTLGRLDAG 338
BLAST of mRNA_H-canaliculatus_F_contig14435.3456.1 vs. uniprot
Match: A0A482S5Z2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S5Z2_9ARCH) HSP 1 Score: 169 bits (427), Expect = 2.490e-48 Identity = 98/189 (51.85%), Postives = 128/189 (67.72%), Query Frame = 1
Query: 1 ATALGQSLSIGCNKSLLSLKLDYNPSLGSEGAAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLHLAVLNLQGNRLEAEGTKTL-SPGLARNRSLVYLSLADNGIGSGDDDVSALEDFRDGMMSCPT-LTHVDLLYNRIGERGARVMLPALEQN--RIKHFLVDATLPTPLFEALHRRDAG 555
ATALG SLS G N SLL+LKLDYN +LG +G ALCRGLRTN SL+QLHL +C+L S +G L ++L+ ++ L VLN+ GNRL +G L + GL N L+L+DN I ++D++ L RD +M+ + LT VDL+YNRIGERG V++ ALE +IK FLVD TLP PLFE L ++ G
Sbjct: 104 ATALGSSLSFGHNISLLTLKLDYNQTLGDDGLVALCRGLRTNMSLRQLHLQFCNLTSASGHALADLLANSRSALEVLNVAGNRLTGQGVYVLCTKGLVVNTKCETLNLSDNLIDQLEEDLAGLTALRDCLMTSTSGLTSVDLMYNRIGERGGLVLVEALESEGCKIKEFLVDLTLPMPLFEKLFKKAGG 292
BLAST of mRNA_H-canaliculatus_F_contig14435.3456.1 vs. uniprot
Match: A0A7S3HG08_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HG08_9STRA) HSP 1 Score: 167 bits (422), Expect = 3.840e-47 Identity = 93/189 (49.21%), Postives = 126/189 (66.67%), Query Frame = 1
Query: 1 ATALGQSLSIGCNKSLLSLKLDYNPSLGSEGAAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLHLAVLNLQGNRLEAEGTKTLSPGLARNRSLVYLSLADNGIGSGDDDVSALEDFRDGMMSCPTL--THVDLLYNRIGERGARVMLPAL--EQNRIKHFLVDATLPTPLFEALHRRDAG 555
A ALG +LS G N SLL+LKLDYN +LG EG LC+GLRTN++LKQLHL +C+L S +G L E+L+ ++ L V N+ GNRL +G +L GL N + LADN I +DD+ L ++ +++ PTL T VDL+YNRIGE GA++++ A+ E +IK FLVD TLP P+FE L R+ G
Sbjct: 144 ANALGSALSYGHNLSLLTLKLDYNATLGDEGVINLCKGLRTNATLKQLHLQFCNLSSASGPALSEVLANSRSGLEVFNIGGNRLGGQGLASLCVGLMHNTKCETICLADNMIDQMEDDIIGLTALKECLLN-PTLALTSVDLMYNRIGEAGAKILIEAVNPENTKIKEFLVDLTLPMPIFEQLFRKGGG 331
BLAST of mRNA_H-canaliculatus_F_contig14435.3456.1 vs. uniprot
Match: A0A7R9U7G5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7G5_9STRA) HSP 1 Score: 163 bits (413), Expect = 6.000e-46 Identity = 93/186 (50.00%), Postives = 123/186 (66.13%), Query Frame = 1
Query: 1 ATALGQSLSIGCNKSLLSLKLDYNPSLGSEGAAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLHLAVLNLQGNRLEAEGTKTLSPGLARNRSLVYLSLADNGIGSGDDDVSALEDFRDGMMS---CPTLTHVDLLYNRIGERGARVMLPALEQN--RIKHFLVDATLPTPLFEALHR 543
A ALG+SL+ G N SL L+LDYNP +GSEG AAL RGLRTN SL++LH +C LG +AG L ++L +++ L VLN+QGNRLE G ++ GL N +L+ L++ADN IG+ + DV AL + S LT VDL +NRIG G V++P L+ N RIK FLVD ++P +F ALHR
Sbjct: 131 AVALGRSLATGMNVSLRILRLDYNPGIGSEGIAALSRGLRTNRSLEELHACFCSLGPEAGVFLADILEFSQSSLRVLNVQGNRLEGVGLNDVAHGLMENSALLELNVADNAIGNSELDVVALRVLAQVISSGNPISALTSVDLQHNRIGFEGGSVLVPCLQANNKRIKTFLVDFSIPAEIFTALHR 316
BLAST of mRNA_H-canaliculatus_F_contig14435.3456.1 vs. uniprot
Match: A0A7S2G5E5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G5E5_9STRA) HSP 1 Score: 156 bits (395), Expect = 7.240e-43 Identity = 87/151 (57.62%), Postives = 106/151 (70.20%), Query Frame = 1
Query: 112 GLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLHLAVLNLQGNRLEAEGTKTLSPGLARNRSLVYLSLADNGIGSGDDDVSALEDFRDG-MMSCPTLTHVDLLYNRIGERGARVMLPALEQN--RIKHFLVDATLPTPLFEALHRRDAG 555
GLRTNSSLKQLHLPYC+L S G PL EMLSYT+L L +LNL+GN++ +G L PGL +++SLV L L+DN I G+ D+ AL F MM L ++ LLYNRIGE GA +LPAL+ + RI+ FLVD TLP PLFEAL R AG
Sbjct: 217 GLRTNSSLKQLHLPYCNLDSAVGQPLSEMLSYTRLGLTMLNLKGNQIRGQGLLELCPGLEKSKSLVDLDLSDNDI--GEQDIEALNAFAVALMMPSVALANISLLYNRIGEAGANALLPALDPSNKRIQQFLVDETLPPPLFEALSRVSAG 365
BLAST of mRNA_H-canaliculatus_F_contig14435.3456.1 vs. uniprot
Match: A0A7S2SFQ2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFQ2_9STRA) HSP 1 Score: 144 bits (362), Expect = 3.430e-38 Identity = 76/148 (51.35%), Postives = 100/148 (67.57%), Query Frame = 1
Query: 118 RTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLHLAVLNLQGNRLEAEGTKTLSPGLARNRSLVYLSLADNGIGSGDDDVSALEDFRDGMMSCPTLTHVDLLYNRIGERGARVMLPAL--EQNRIKHFLVDATLPTPLFEALHRRDAG 555
RTNS+LKQLHLP+C++ +D GAP+G+ML+++KL L +LNL+GN L G L PGL+R SL LSLADN IGS DD+ L F + +M+ TL +DL +NR+ A V+LPAL E RI+ F VD LPT +FE L+R G
Sbjct: 188 RTNSTLKQLHLPFCNIDADGGAPIGDMLAFSKLGLTLLNLRGNYLGDAGLGNLCPGLSRTASLTELSLADNSIGSNPDDLEPLRMFSETLMTSTTLCRIDLNHNRLHAEAAEVLLPALAPENARIQMFTVDPDLPTEIFEKLNRAGGG 335
BLAST of mRNA_H-canaliculatus_F_contig14435.3456.1 vs. uniprot
Match: A0A7S1XUG2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUG2_9STRA) HSP 1 Score: 147 bits (371), Expect = 7.100e-38 Identity = 83/183 (45.36%), Postives = 118/183 (64.48%), Query Frame = 1
Query: 1 ATALGQSLSIGCNKSLLSLKLDYNPSLGSEGAAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLHLAVLNLQGNRLEAEGTKTLSPGLARNRSLVYLSLADNGI-GSGDDDVSALEDFRDGMMSCPTLTHVDLLYNRIGERGARVMLPALEQN-RIKHFLVDATLPTPLFEALHR 543
A LG++LS G N SLL+LKL+ N +LGS G AALCRGLR+NS LKQLHL +C++G D G PL E LSY++ L VL ++GNRL G + L+ G+ N+SL L ++DN I G +++ L F + + TL +V+++YNR+ + G + PA+E N + FLVD L L+ AL +
Sbjct: 395 ARMLGRALSYGSNMSLLTLKLNCNLNLGSAGVAALCRGLRSNSVLKQLHLEFCNIGPDGGGPLAEALSYSRTALQVLCMKGNRLGNVGLRDLATGIQLNQSLTTLDVSDNAINGYTFEEIDCLAAFAQAVKASTTLANVNIMYNRLTDGGGEALKPAVEGNGTLGTFLVDTQLSEELYAALFK 577
BLAST of mRNA_H-canaliculatus_F_contig14435.3456.1 vs. uniprot
Match: A0A485LQC0_9STRA (Aste57867_24124 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQC0_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.850e-35 Identity = 83/183 (45.36%), Postives = 113/183 (61.75%), Query Frame = 1
Query: 4 TALGQSLSIGCNKSLLSLKLDYNPSLGSEGAAALCRGLRTNSSLKQLHLPYCDLGSDAGAPLGEMLSYTKLHLAVLNLQGNRLEAEGTKTLSPGLARNRSLVYLSLADNGIGSGDDDVSALEDFRDGMMSCPTLTHVDLLYNRIGERGARVMLPALEQN---RIKHFLVDATLPTPLFEALHR 543
T L +L L +LKL+ N +G +G AALC+GL TN+++KQLHL +C + S L ++LS K L L+LQGN L EG LS GL R+ SLV L+L+DNGI DV+AL FRD +++C TLT V +N I GA ++LPALE + R+K F VD +LP +F+ L+R
Sbjct: 146 TMLADALKAEKKAPLQALKLNCNSKIGDDGVAALCQGLFTNTTIKQLHLEFCKITSAGTIVLAQLLSMAKSGLQSLSLQGNLLGDEGLLHLSKGLKRSHSLVKLNLSDNGIRK---DVAALTAFRDAIVACKTLTSVKFSFNLIDIEGADILLPALESDDGARLKCFEVDPSLPPEVFKKLNR 325 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14435.3456.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14435.3456.1 >prot_H-canaliculatus_F_contig14435.3456.1 ID=prot_H-canaliculatus_F_contig14435.3456.1|Name=mRNA_H-canaliculatus_F_contig14435.3456.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=202bp ATALGQSLSIGCNKSLLSLKLDYNPSLGSEGAAALCRGLRTNSSLKQLHLback to top mRNA from alignment at H-canaliculatus_F_contig14435:336..2084+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14435.3456.1 ID=mRNA_H-canaliculatus_F_contig14435.3456.1|Name=mRNA_H-canaliculatus_F_contig14435.3456.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1749bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14435:336..2084+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14435:336..2084+ >mRNA_H-canaliculatus_F_contig14435.3456.1 ID=mRNA_H-canaliculatus_F_contig14435.3456.1|Name=mRNA_H-canaliculatus_F_contig14435.3456.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1212bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14435:336..2084+ (Hapterophycus canaliculatus Oshoro5f female)back to top |