mRNA_H-canaliculatus_F_contig1440.3442.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1440.3442.1
Unique NamemRNA_H-canaliculatus_F_contig1440.3442.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1440.3442.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 891 bits (2303), Expect = 1.250e-309
Identity = 526/940 (55.96%), Postives = 665/940 (70.74%), Query Frame = 1
Query:   28 CCLCTCSGN--ACTSSFFDCLDPSADDELHECEAPPPKPNSCSVDYQRAWVVETTAQANVLAAALNCSGGFFDVEWRQSVAVSQAFRVVDGTTLTIMGTS-LEAAIHGNARTRLFTVVNATLHLHSVNLSAGASVAGGAIAAAGSTLVLNQTNFYGNSAAGHGGAVFLSDASSLSCVGGGTIFEGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGSTALDVTSNPEESTIIINGTTTFVNNTCGANGGVMSLLGRLSVEIGAVDVRFVNNSAAVAGGAVFVSGTGVGPVFTGVSFISNSAQVGGAVSTVGTGNLQSSGGIAPQN-PTTFDGCLFVDNRATATGGAIESAAGQDSFVRSIFKSNRAGTGGALRLAGTASMXXXXXXXXXXXXXXXXXXSNIGAILRIENIFFSDNVFDCESDTFLNFTSVGDPNQVACSGCPG-CDSCFFEESPSVPICSDVPGHSKSTGGNITLETLLIERGYWRATPSSPDIIACYHSDACLGGVTGTAAYCREGYEGPYCSICSNGYAAGLGFVCSRCSESAGGVVLAIALSVLVLLVAAAVVVYVMSGEVSGTRRGMIERVASHIPLHSVKIVVVAWQILTQFASAANVTYPDVYQRFLDGLDVFNFDLGWILSAACVIEVDFHDRLLISTIGPTFVLLFLAGTHAAAKGMHRGDTAALRIIRNKHLSMVLLVTFLVYSSVSSILFKTFACEELDDGNNYLRADYRIECDSSKHKAFAIYAGIMIVVYTVGIPAFYAFLLFRRREVLTR----RDDDHFVSS--DLCTSYKPSRFYYELVEFARRICLTGMVVFIYPNTAAQIAITLMMAVVFALISEGLAPYSSLWDCWLNRMGYAVVSVSMYVALLLKVDVSDERAVSQKVFDYVLIAVHACMVLAILAETLLLACSLTLSREDPSARFRVGRISLT 2814
            CC CTC  +  +C  + F CLDPSA D L++CE PP     CS + Q+AWVVE +AQA  LAA +NCSGG F VEWR SV++     +V GT L + G     A I GN  TRLF+V NATL L  V L +G+S  GGAIAA+G+TL  N T+F  NSA  +GGA++L+D SS+S  GG       XXXXXXXXXX         XXXXXXXXXXXXXXX  GS A D   +PE+ST+ I+G T FVNNT G NGG ++LLG LS+ +   +  FV+NSA +AGGAV+VS T +GP F+ V F SNSAQVGGAVS++G+GN++  GG   Q  PTTF  C F  NRATATGGA++SA+GQD F  ++F+ N+A TGGALRLAG AS+                  SN+G I  I N  FS NVF+C  DTFLN+TS GD    ACSGC   CD C   + P VP+CSDV  HS+S GG +TLETL I+ GYWRAT SS +++ACY+ DAC+GG+TG   YC EGYEGPYC+ICS+ Y+A LGF CS+C   AGG++LA AL+V+ L    AVV YV       T   M   +  ++PL ++KI+VVAWQI+TQF SAANVTYPDVYQRFL+GLDVFNFD+ W+LSA CV+++DFHDRLL+STIGP   LLFLA T+ A   ++RG+ A L+++ ++H+SMVLL+ FLVYS VSS++F+TFAC++L+ G  YLRADYRIECDSSKH+ F +YAG MI++Y VGIPAFY  LL R R+VL +    R+D   V+S  +L   Y+PS +YYE++E  RRI LTG+VVFIYPNTAAQIAITL+M VVFA++SE L PY+  WD W++R+ +AVV +S+YVALLLKVDVS+E+  SQKVF+ VL+A HACM+LA++ ET+LL C   +  +D  A  RVG  S+T
Sbjct:   85 CCECTCVDSLFSCGIAGFSCLDPSATD-LYDCEEPPAA-TPCSAEAQQAWVVEDSAQAQALAANVNCSGGSFQVEWRGSVSLDAPIFIVHGTDLNVTGGGEASAVIDGNGTTRLFSVDNATLRLSGVELRSGSSAIGGAIAASGATLAFNNTSFVNNSAGSNGGALWLTD-SSVSWGGGTEFISXXXXXXXXXXXXLNGSYVSSTXXXXXXXXXXXXXXXXVGSVASDSVLSPEDSTLSIDGPTAFVNNTSGENGGALALLGGLSISVNTGETSFVDNSANLAGGAVYVSDTAIGPTFSDVIFDSNSAQVGGAVSSLGSGNVK--GGENDQLLPTTFSRCRFTFNRATATGGAVDSASGQDLFEDTVFRGNQAVTGGALRLAGRASLVNCSFVENLSDDGEGAAVSNVGVISEISNTTFSGNVFNCAPDTFLNYTS-GDALDEACSGCQTTCDGCV--QPPVVPLCSDVIPHSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETILLGCPSRVKEQDEPAP-RVGGDSVT 1015          
BLAST of mRNA_H-canaliculatus_F_contig1440.3442.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 865 bits (2235), Expect = 3.470e-296
Identity = 444/715 (62.10%), Postives = 541/715 (75.66%), Query Frame = 1
Query:  685 GSTALDVTSNPEESTIIINGTTTFVNNTCGANGGVMSLLGRLSVEIGAVDVRFVNNSAAVAGGAVFVSGTGVGPVFTGVSFISNSAQVGGAVSTVGTGNLQSSGGIAPQNPTTFDGCLFVDNRATATGGAIESAAGQDSFVRSIFKSNRAGTGGALRLAGTASMXXXXXXXXXXXXXXXXXXSNIGAILRIENIFFSDNVFDCESDTFLNFTSVGDPNQVACSGCP-GCDSCFFEESPSVPICSDVPGHSKSTGGNITLETLLIERGYWRATPSSPDIIACYHSDACLGGVTGTAAYCREGYEGPYCSICSNGYAAGLGFVCSRCSESAGGVVLAIALSVLVLLVAAAVVVYVMSGEVSGTRRGMIERVASHIPLHSVKIVVVAWQILTQFASAANVTYPDVYQRFLDGLDVFNFDLGWILSAACVIEVDFHDRLLISTIGPTFVLLFLAGTHAAAKGMHRGDTAALRIIRNKHLSMVLLVTFLVYSSVSSILFKTFACEELDDGNNYLRADYRIECDSSKHKAFAIYAGIMIVVYTVGIPAFYAFLLFRRREVLTRRDDDH------FVSSDLCTSYKPSRFYYELVEFARRICLTGMVVFIYPNTAAQIAITLMMAVVFALISEGLAPYSSLWDCWLNRMGYAVVSVSMYVALLLKVDVSDERAVSQKVFDYVLIAVHACMVLAILAETLLLACSLTLS-REDPSARFRVGRI 2805
            GS + D  SN + ST+++NGTT FVNNTCGANGG ++LLG L+V IG  +V F+ N+A VAGGAVFVSGTG GP+FTG  FISNSAQVGGAVSTVG+GNL+ +  I+P NPTTFD C F+DNRATATGGAI+SAAGQD+FV S F+ NRAGTGG LRLAGTAS+                  SNIG++L +ENI FS NVFDC+   +L++ + G+P + AC GC   CD CFFE  P  P C+DV  H  S GG +TLE L +ERGYWRA+PSS ++ ACY+SDACLGGVTG A YC +GYEGPYC++CS+GY   L F C+RCS  AG + LA  L+V+VL VA AV  Y MSG V   R G++ R+  +IPL SVKIV+VAWQILTQF S ANVTYPDVY+RFLDGLDVFNFDL W+LSA C+ ++DFHDRLL ST+ P   LLFLAGT+AAA  M+RG   +L++I NKH+S+VLL+TFL+YSSVS+ LFK F CEEL+DG NYLRADY I+CDSSKHKAF +YAG M+VVY VGIPA YAFLLFR R VL     D         +SDL   YKPS FYYE++E  RR+ L G+VVFI+PNTAAQIAITLMMA  F ++SEGLAP++S WD WLNR G+ VV VSMY+ALLLKVDVS ERA SQ+V++ VL+A HACM+LA++ ET +L  SL +  R++P+ RFR G++
Sbjct:  541 GSFSTDSVSN-QGSTLVMNGTTAFVNNTCGANGGALALLGGLAVNIGTENVSFIGNAAEVAGGAVFVSGTGFGPIFTGARFISNSAQVGGAVSTVGSGNLKENADISPPNPTTFDHCHFIDNRATATGGAIDSAAGQDAFVNSTFQGNRAGTGGGLRLAGTASLDTCSFVDNISDDQGGAAVSNIGSLLSVENITFSGNVFDCDPGMYLDYNASGNPYEAACGGCETACDGCFFEP-PVPPTCTDVMEHITSAGGTVTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLKVEQRQEPTTRFRHGKL 1253          
BLAST of mRNA_H-canaliculatus_F_contig1440.3442.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI)

HSP 1 Score: 832 bits (2148), Expect = 3.270e-281
Identity = 539/1340 (40.22%), Postives = 666/1340 (49.70%), Query Frame = 1
Query:    4 LCGYDGGDCCLCTCSGNACTSSFFDCLDPSADDELHECEAPPPKPNSCSVDYQRAWVVETTAQANVLAAALNCSGGFFDVEWRQSVAVSQAFRVVDGTTLTIMGTSLEAAIHGNARTRLFTVVNATLHLHSVNLSAGASVAGGAIAAAGSTLVLNQTNFYGNSAAGHGGAVFLSDASSLSCV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGTIFEGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAA------------------------------------------------------------------------------------------------------------GSTAL----------------------------------------------------------------DVTSNPEESTIIINGTTTFVNNTCGANGGVMSLLGRLSVEIGAVDVRFVNNSAAVAGGAVFVSGTGVGPVFTGVSFISNSAQVGGAVSTVGTGNLQSSGGIAPQNPTTFDGCLFVDNRATATGGAIESAAGQDSFVRSIFKSNRAGTGGALRLAGTASMXXXXXXXXXXXXXXXXXXSNIGAILRIENIFFSDNVFDCESDTFLNFTSVGDPN-QVACSGCP-GCDSCFFEESPSVPICSDVPGHSKSTGGNITLETLLIERGYWRATPSSPDIIACYHSDACLGGVTGTAAYCREGYEGPYCSICSNGYAAGLGFVCSRCSESAGGVVLAIALSVLVLLVAAAVVVYVMSGEVSGTRRGMIERVASHIPLHSVKIVVVAWQILTQFASAANVTYPDVYQRFLDGLDVFNFDLGWILSAACVIEVDFHDRLLISTIGPTFVLLFLAGTHAAAKGMHRGDTAALRIIRNKHLSMVLLVTFLVYSSVSSILFKTFACEELDDGNNYLRADYRIECDSSKHKAFAIYAGIMIVVYTVGIPAFYAFLLFRRREVLTR----RDDDHFV--SSDLCTSYKPSRFYYELVEFARRICLTGMVVFIYPNTAAQIAITLMMAVVFALISEGLAPYSSLWDCWLNRMGYAVVSVSMYVALLLKVDVSDERAVSQKVFDYVLIAVHACMVLAILAETLLLACSLTLS-REDPSARFRVGR 2802
            LCGYDGGDCC+C+C G  C  + F+CLDPSA++ELH+CE  P     C+ D Q+ WVVE++ QA  LAAA+NCSGG F+VEWR  V V Q F VVDGT LTI G    A + GNA TR+FTVVNA L+L  VN+S G+S  GGAIAAA S+L LN TNF GN+A+ +GGA+++SD SS+ CV                                                                                                                                                                                                                                  GG T FE N                                  +A                                                                                                            GS++                                                                 D   NP ES+++INGTTTF NNTCG NGG ++L    S++I   DV F  NSA  AGGAVFVSG G+GP F+ VSFISN AQVGGA S  G+GN +  G ++P  PT FD C F+DN AT +GGA++SAAGQD  V S+FK N A  GGALRLAG    XXXXXXXX          SNIG +  + N  F+ N F C  D FL + +  +   +  C GC   CD C F+E P+VP CSDV  H  STGG +TLETL I+ GYWRAT SS +I+ CY++DACLGGVTGTA YC E YEGPYCSICS+GYA+ LG+ CS+C   +GG+V A+ ++VL L VA  V++Y+MSGE    R  ++ER+  ++PL SVKIV+V+WQILTQFASAANV YP VYQ+FLDGL VF FDLGW++SA CV+++ FH RLL +TIGP F +L LAGT+AAA  ++R     LRII +KH+ + LL+TFLVYSSVSS LFKTFAC+EL+DG NYLR DYRIECDSSKHK F +YAG MI++Y +GIP  Y+ LLF+ REVL +    RDD   V  +S+L   YKPS FYYE++E  RRI LTG+VVFIYPNTAAQ+AITLMMA  FAL+SE ++PYSS W+ W+NRMG+ VV+VSMYVALLLKVDVSDERA SQ VF+ VL+ VHACM+L+++ ET ++A   T   RED  ARFR G+
Sbjct:   86 LCGYDGGDCCVCSCQGVNCMRTSFECLDPSANEELHDCEPSPQLALPCTADAQQTWVVESSTQAQALAAAVNCSGGLFEVEWRGRVVVGQPFYVVDGTVLTISGADSSAVVEGNASTRIFTVVNADLYLSHVNVSYGSSTTGGAIAAARSSLTLNGTNFVGNTASAYGGAIYVSDGSSVYCVXXXXXXXXXXXXXXXXXVTGSXVISGXXXXXXXXXXXXXXXXXXXSGSSASWGEESMFATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLTTHANNWVGDFGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELDSSLSFGGNTSFESNRALGDLNTEIGWGGALHVDGSNASSSGQVKFTGNSARYGGALYVLHGSXXXXXXXXXXXXXXXXXXXXXXXXFSAMSWFGDTQMFNNSAEXXXXXXXXXXXXXXXXXXXXTENRVTGDAAAGGIICAVFASTIYWSGGLTRFIGGSSSFVGGALYVSGSEVTWSGGTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGAMMSPSYDSEYNPLESSLVINGTTTFFNNTCGENGGSLALFDACSLDINTADVSFTGNSAGFAGGAVFVSGAGIGPTFSDVSFISNFAQVGGAASVFGSGNDR--GMLSPIIPTKFDRCRFIDNVATTSGGAVDSAAGQDIVVNSVFKGNSAEVGGALRLAGXXXXXXXXXXXXVSGRQEGAAVSNIGLVSTMANSSFTGNGFTCGPDLFLEYDATDNGTFEAVCDGCRVACDGCSFDEPPAVPTCSDVMDHGTSTGGKVTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWTRRLREDLPARFRRGK 1423          
BLAST of mRNA_H-canaliculatus_F_contig1440.3442.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI)

HSP 1 Score: 777 bits (2007), Expect = 1.320e-257
Identity = 416/710 (58.59%), Postives = 505/710 (71.13%), Query Frame = 1
Query:  712 NPEESTIIINGTTTFVNNTCGANGGVMSLLGRLSVEIG-AVDVRFVNNSAAVAGGAVFVSGTGVGPVFTGVSFISNSAQVGGAVSTVGTGNLQSSGGIAPQNPTTFDGCLFVDNRATATGGAIESAAGQDSFVRSIFKSNRAGTGGALRLAGTASMXXXXXXXXXXXXXXXXXXSNIGAILRIENIFFSDNVFDCESDTFLNFTSVGDPNQVACSGCP-GCDSCFFEESPSVPICSDVPGHSKSTGGNITLETLLIERGYWRATPSSPDIIACYHSDACLGGVTGTAAYCREGYEGPYCSICSNGYAAGLGFVCSRCSESAGGVVLAIALSVLVLLVAAAVVVYVMSGEVSGTRRGMIERVASHIPLHSVKIVVVAWQILTQFASAANVTYPDVYQRFLDGLDVFNFDLGWILSAACVIEVDFHDRLLISTIGPTFVLLFLAGTHAAAKGMHRGDTAALRIIRNKHLSMVLLVTFLVYSSVSSILFKTFACEELDDGNNYLRADYRIECDSSKHKAFAIYAGIMIVVYTVGIPAFYAFLLFRRREVLTRRD-------DDHFVSSDLCTSYKPSRFYYELVEFARRICLTGMVVFIYPNTAAQIAITLMMAVVFALISEGLAPYSSLWDCWLNRMGYAVVSVSMYVALLLKVDVSDERAVSQKVFDYVLIAVHACMVLAILAETLLLACSLTLSR-------EDPSARFR 2793
            N E S I+INGTT+F NN CG NGG ++LLG   + +  A  VRF  N+AAVAGGAVFVSG G GP F   +F SNSAQVGGAV+  G+GN +    I P NPTTF+ C FV NRATATGGAI+SAAG D FV + F+ N AGTGGALRLAGTAS+                  SNIG +   ENI FS N FDC S TFL + +  D  +  C+GC   C  C F +   VP C+D+  HS S+ G  TLETL I+ GYWRAT S  +++ACYH+DACLGGVTGT+ YC EGYEGPYC+ICS GY+A + F C  CS++AGG+ LA AL+V+ L++  AVV YV SGE +G  RG++ERV  +IPL SVKIVVVAWQI+TQF + ANVTYP VYQ FL+GL+VFNFDL W+LSA CV++VDFHDRLL++TIGP F  L L  T+AAA  +HRG T  L  +R+KH+ MVLL+TF VYSSVS+ LF+TFACE L+DG  YL ADYRIECDSSKHK F +YAG M+++YT GIPA Y+FLLFR R+VL  R+            +SDL   YKPS FYYE+VE ARR+ L G+VVFIYPN++AQIAITL++A  F LISEGLAPY+S WD W+NRMG+ VV  SMY+ALLLKVDVS ER+ SQ VF+ VL+  H  MV+  +AETL+LA +L   R       ED   RFR
Sbjct:  902 NLENSAILINGTTSFFNNACGGNGGAVTLLGACDLVVNPAASVRFTENAAAVAGGAVFVSGAGAGPAFANTTFTSNSAQVGGAVAVFGSGNSKGVADIEPPNPTTFERCWFVGNRATATGGAIDSAAGHDYFVDTTFEDNAAGTGGALRLAGTASINSCSFVENFSDDEGGAAVSNIGTVESTENISFSANGFDCPSGTFLGYNASADLFEAVCNGCQTACVGCAFADPLLVPTCTDLLEHSTSSDGRDTLETLSIQAGYWRATTSGTEVLACYHADACLGGVTGTSGYCLEGYEGPYCAICSEGYSAQMSFTCRTCSDNAGGIALAAALAVVGLVLLVAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATETLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLALALRAERRRDQHLQEDRLPRFR 1611          
BLAST of mRNA_H-canaliculatus_F_contig1440.3442.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE)

HSP 1 Score: 767 bits (1980), Expect = 2.230e-255
Identity = 514/1341 (38.33%), Postives = 638/1341 (47.58%), Query Frame = 1
Query:    4 LCGYDGGDCCLCTCSGNACTSSFFDCLDPSADDELHECEAPPPKPNSCSVDYQRAWVVETTAQANVLAAALNCSGGFFDVEWRQSVAVSQAFRVVDGTTLTIMGTSLEAAIHGNARTRLFTVVNATLHLHSVNLSAGASVAGGAIAAAGSTLVLNQTNFYGNSAAGHGGAVFLSDASSLSCV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGTIFEGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------------------------------------------------------------AAG---------------------------------------------------------------------------------------STALDVTSNPEESTIIINGTTTFVNNTCGANGGVMSLLGRLSVEIGAVDVRFVNNSAAVAGGAVFVSGTGVGPVFTGVSFISNSAQVGGAVSTVGTGNLQSSGGIAPQNPTTFDGCLFVDNRATATGGAIESAAGQDSFVRSIFKSNRAGTGGALRLAGTASMXXXXXXXXXXXXXXXXXXSNIGAILRIENIFFSDNVFDCESDTFLNFTSVGDPN-QVACSGCP-GCDSCFFEESPSVPICSDVPGHSKSTGGNITLETLLIERGYWRATPSSPDIIACYHSDACLGGVTGTAAYCREGYEGPYCSICSNGYAAGLGFVCSRCSESAGGVVLAIALSVLVLLVAAAVVVYVMSGEVSGTRRGMIERVASHIPLHSVKIVVVAWQILTQFASAANVTYPDVYQRFLDGLDVFNFDLGWILSAACVIEVDFHDRLLISTIGPTFVLLFLAGTHAAAKGMHRGDTAALRIIRNKHLSMVLLVTFLVYSSVSSILFKTFACEELDDGNNYLRADYRIECDSSKHKAFAIYAGIMIVVYTVGIPAFYAFLLFRRREVLTR----RDDDHFV--SSDLCTSYKPSRFYYELVEFARRICLTGMVVFIYPNTAAQIAITLMMAVVFALISEGLAPYSSLWDCWLNRMGYAVVSVSMYVALLLKVDVSDERAVSQKVFDYVLIAVHACMVLAILAETLLLACSLTLS-REDPSARFRVGR 2802
            LCGYDGGDCC+C+C G  C ++ F+CLDPSA +ELH+CE  PP    C+ D Q+ WVVE++AQA  LAAA+NCSGG F+VEWR  V V + F VVDGT LT+ G    A + GNA TR+FTVVNA L+L  VN+S G+S  GGAIAAA S+L LN T+F GN+A+ +GGA++LSD SS+ CV                                                                                                                                                                                                                                  GG T FE N                                                                                                                        AAG                                                                                       S + D T NP ES++ INGTTTF NNTCG NGG ++LLG  S++I   DV F  NS                                 A S  G+GN +  G ++P  PT F+ C F+DN ATA+GGA++SAAGQD  V S+FK N A  GGALR       XXXXXXXX          SNIG +  + N  F+ N F C  D FL F + GD   +  C GC   CD C F+E P+VP CSDV  HS S GGN+TLETLLI+ GYWRAT SS  I+ CY++DACLGGVTGTA YC E YEGPYCSICSNGYA+ LG+ CS+C   +GG+  A+ L+V+ + VA  V+ Y+MSGE    R  + ER+  ++PL SVKIV+V+WQI+TQFASAANV YP VYQ+F+DGL VF FDLGW+LS  CV+++DFH RLL +TIGP F +L LAGT+AAA  ++R     LRII +KH+ + LL+TFLVYSSVSS LFKTFAC+EL+DGN YLR DYRIECDSSKHK F +YAG MI++Y +GIP  Y+ LLFR REVL +    R+D   V  +S+L   YKPS FYYE++E  RR+ LTG++VFIYPNTAAQ+AITLMMA  FAL+SE ++PYSS W+ W+NRMG+ VV+VS+YVALLLKVDVSDERA SQ VF+ VL+ VHACM+L+++ ET ++A       RED  ARFR G+
Sbjct:  145 LCGYDGGDCCVCSCQGVNCMTTSFECLDPSASEELHDCEPSPPLALPCTADAQQTWVVESSAQAQALAAAVNCSGGLFEVEWRGRVVVGEPFNVVDGTVLTVSGADSSAVVEGNASTRIFTVVNANLYLSGVNVSYGSSTVGGAIAAARSSLTLNGTSFVGNAASSYGGAIYLSDGSSVYCVRSTFSXNEXXXXXXXXXVTGXXVVSGGGXXXXXXXXXXXXXXXXXXDSSASWGEVSMFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTYANNWVGDYGFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKMDSSLSFGGNTSFESNRALGDLNTEVGWGGALLVQDGSNASSSGQVKFTGNSARDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKMFNNSAVLXXXXXXXXXXXXXXXXXXXTENRVTGVSAAGGIICAVLASTIHWSGGLTRFIGSSSSLAGGALYVSGSEVTWSGGTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLGGAVMSPSYDSTYNPLESSLAINGTTTFFNNTCGENGGGLALLGAFSLDINTADVSFTENSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAASVFGSGNDR--GILSPVVPTKFNRCRFIDNVATASGGAVDSAAGQDIVVNSVFKGNSAEVGGALRXXXXXXXXXXXXXXXVSGHQEGAAVSNIGLVSTMANSSFTGNGFTCGPDLFLEFDTSGDGTFEAVCDGCRVACDGCSFDEQPAVPTCSDVMDHSTSPGGNVTLETLLIDPGYWRATSSSKKILPCYNADACLGGVTGTAGYCLESYEGPYCSICSNGYASNLGYSCSKCFSRSGGIAFAVGLAVVAVFVAVVVIRYIMSGEAGERRIYVFERLGWYVPLQSVKIVIVSWQIVTQFASAANVVYPGVYQQFIDGLKVFGFDLGWLLSVGCVLDMDFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGN-YLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPVLYSILLFRDREVLKKDKADRNDSARVKSTSELWQPYKPSVFYYEVIECGRRVLLTGIIVFIYPNTAAQLAITLMMAFFFALLSEAVSPYSSRWETWVNRMGHVVVAVSVYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFVVAGLWRQKLREDVPARFRRGK 1482          
BLAST of mRNA_H-canaliculatus_F_contig1440.3442.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI)

HSP 1 Score: 744 bits (1920), Expect = 6.090e-252
Identity = 396/716 (55.31%), Postives = 497/716 (69.41%), Query Frame = 1
Query:  685 GSTALDVTSNPEESTIIINGTTTFVNNTCGANGGVMSLLGRLSVEIGAVDVRFVNNSAAVAGGAVFVSGTGVGPVFTGVSFISNSAQVGGAVSTVGTGNLQSSGGIAPQNPTTFDGCLFVDNRATATGGAIESAAGQDSFVRSIFKSNRAGTGGALRLAGTASMXXXXXXXXXXXXXXXXXXSNIGAILRIENIFFSDNVFDCESDTFLNFTSVGDPNQVACSGCP-GCDSCFFEESPSVPICSDVPGHSKSTGGNITLETLLIERGYWRATPSSPDIIACYHSDACLGGVTGTAAYCREGYEGPYCSICSNGYAAGLGFVCSRCSESAGGVVLAIALSVLVLLVAAAVVVYVMSGEVSGTRRGMIERVASHIPLHSVKIVVVAWQILTQFASAANVTYPDVYQRFLDGLDVFNFDLGWILSAACVIEVDFHDRLLISTIGPTFVLLFLAGTHAAAKGMHRGDTAALRIIRNKHLSMVLLVTFLVYSSVSSILFKTFACEELDDGNNYLRADYRIECDSSKHKAFAIYAGIMIVVYTVGIPAFYAFLLFRRREVLTRRDDDH------FVSSDLCTSYKPSRFYYELVEFARRICLTGMVVFIYPNTAAQIAITLMMAVVFALISEGLAPYSSLWDCWLNRMGYAVVSVSMYVALLLKVDVSDERAVSQKVFDYVLIAVHACMVLAILAETLLLACSLTLSR---EDPSARFRVGR 2802
            GS  LD   NP+ S +I+                 ++LLG LSV IG  +  FV N+AAVAGGA+FVSGT VGP F  +S +SNSAQVGGA+S +G+G   +     P  PTTF+ C F  NRA ATGGA+++AAGQD FV S+F+ N AGTGGALRLAGTA +                  SNIG +  + N+ FS NV+ C+   FL     G   +  C GCP  C+ C FEE   VP CSD   HS S+GG +TL+ L+IE GYWRATPSS +++ CY++DACLGGVTG+ +YC EGYEGPYC++CS GY A LG  CS+CS+ AG + L +++SV  LL   A+V Y +SGE  G  RG++ER    +PL SVKIV+VAWQILTQF S AN+ +P VYQRFLD L++FNFDLGW+LSA CV +VDFHDRLL+STI P   LLFLA  +AAA       +  L+ + +KH+S+VLL+TFLVY+SVS++LF+TFACEELDD  NYLRADYRIECDS KH AF +YAG MIV+YTVGIPA Y   LFR  +VL R + D         ++DL   Y+PS FYYE++E ARR+ L G+VVFIYPNTAAQIA+ L++AVVFA+ISE LAPY+S WD WL RMG+AVV+VSMYVALLLKVDVSDERA SQ+VF+ +L+A H CMV  +L E ++ A SL + +   +  S+ FR GR
Sbjct:  261 GSFVLDSLYNPQGSYLIVXXXXXXXXXXXXXXXXALALLGGLSVTIGTENTVFVGNTAAVAGGAIFVSGTAVGPTFVNISLVSNSAQVGGAISLIGSGTSFNPEDYTPA-PTTFEQCRFTSNRAIATGGAVDTAAGQDKFVNSVFEGNTAGTGGALRLAGTAEVNNCSFVENVSDDGGGAAVSNIGFVSSVSNLSFSRNVYGCQEGMFLECEESGTLYEAICDGCPVECEGCSFEEPQLVPKCSDALEHSNSSGGTVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIMEAISLWVEKRGQQPASSSFRRGR 975          
BLAST of mRNA_H-canaliculatus_F_contig1440.3442.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI)

HSP 1 Score: 744 bits (1920), Expect = 2.090e-249
Identity = 505/1221 (41.36%), Postives = 624/1221 (51.11%), Query Frame = 1
Query:   40 TCSGNACTSSFFDCLDPSADDELHECEAPPPKPNSCSVDYQRAWVVETTAQANVLAAALNCSGGFFDVEWRQSVAVSQAFRVVDGTTLTIMGTSLEAAIHGNARTRLFTVVNATLHLHSVNLSAGASVA-GGAIAAAGSTLVLNQTNFYGNSAAGHGGAVFLSDASSLSCVG--------------------------------------GGTIFEGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGSTA------------------------------------------------------------------------LDVTSNPEESTIIINGTTTFVNNTCGANGGVMSLLGRLSVEIGAVDVRFVNNSAAVAGGAVFVSGTGVGPVFTGVSFISNSAQVGGAVSTVGTGNLQSSGGIAPQNPTTFDGCLFVDNRATATGGAIESAAGQDSFVRSIFKSNRAGTGGALRLAGTASMXXXXXXXXXXXXXXXXXXSNIGAILRIENIFFSDNVFDCESDTFLNFTSVGDPNQVACSGCP-GCDSCFFEESPSVPICSDVPGHSKSTGGNITLETLLIERGYWRATPSSPDIIACYHSDACLGGVTGTAAYCREGYEGPYCSICSNGYAAGLGFVCSRCSES-AGGVVLAIALSVLVLLVAAAVVVYVMS-GEVSGTRRGMIERVASHIPLHSVKIVVVAWQILTQFASAANVTYPDVYQRFLDGLDVFNFDLGWILSAACVIEVDFHDRLLISTIGPTFVLLFLAGTHAAAKGMHRGDTAALRI-IRNKHLSMVLLVTFLVYSSVSSILFKTFACEELDDGNNYLRADYRIECDSSKHKAFAIYAGIMIVVYTVGIPAFYAFLLFRRREVLTR----RDDDHFVSSD--LCTSYKPSRFYYELVEFARRICLTGMVVFIYPNTAAQIAITLMMAVVFALISEGLAPYSSLWDCWLNRMGYAVVSVSMYVALLLKVDVSDERAVSQKVFDYVLIAVHACMVLAILAETLLLACSLTLSREDPSARFRVG 2799
            TCS   C SS FDCLDP + +  +EC+ PPP    CS + Q++WVV  +A+A  LAAA+NCSGG F+VEWR SV V     V DGT +T+ G    A I G+A TRLFTVV+A+LHL +VN+S GAS A GG IAAAGS + LN T+  GN A GHGGAV+ S+ S++SC+G                                      GG I+ GN                XXXXXXXXXXXXXXXXXX                                                                                                                                                                                      GSTA                                                                        LD   N   ST++ING T FVNNTCG +GG ++    LSV+I    V F  N+A VAGGAVFVSG GVG VF              AVS VG+GNL+    +   +PTTFD C FV N+A+ATGGA ESAAGQD+FV ++F  N+AGTGGALR+AGTAS+                  SNIG I ++ +I+FSDNVFDC S TFL+  + GDP +  C+GC   CD C FE+    P CS+V  HS STGGN TL+ + I+RGYWRAT  S +++ C+ +DACLGGVTGT+ YC EGYEGPYCSICS GY   LGF C++CSE+ AGG+V+                 Y+MS  +  G   G++ER+A HIPL SVKIV+V+WQILTQF S ANVTYPDVYQ FLD +DVFNFDL W+ S  C+ ++DFHDRLL+STI P   L FLA T+AA    +RG    L+  +  KH+SM LL+TFLVYS+VSS+LF++FACEEL DG NYLR+DYRIECDSS HKAF +YAG MIV+Y VGIPA YA LLFR R+VL +    R+D   V+S   L   YKPS FYYE                        IA+TL++AV F ++SE L PYSS WD W +RMG+ VV VSMYVALLLKVDVSDERA SQ+VF+ +L+AVHACMV  ++ ET++L+ SL  ++E  + R R+ 
Sbjct:    4 TCSHADCYSSLFDCLDPGSSNGFYECQEPPPATLPCSAEVQQSWVVADSAEALALAAAVNCSGGSFEVEWRGSVVVESPIYVRDGTIVTVTGVGSTAVIDGHAATRLFTVVDASLHLRNVNISYGASRAVGGGIAAAGSRVTLNHTSIVGNRATGHGGAVYASNGSTVSCLGDTAFNXXXXXXXXXXXXXXXXXXXXXGAAWLGNVAGDSGGAIYAGNGSSVSWSDDAVFVESGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTFTNNSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVYVQTASSISWAGHAESVFDGNQALIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALEVGSGCNASFGGNXXXXXXSAVGDPGILESGFGGALLVVGRELPAGVFLGGSTAFVGNFAEKVGGGLVASYATAAWGXXXXXXXXXXXXXXGAVFVVNGSSVXXXXXXXXXXXXXXXXXXXVASPILDSVYNLRSSTLLINGPTAFVNNTCGGSGGGLAAFDGLSVDIDTAGVTFSGNAAEVAGGAVFVSGAGVGFVFXXXXXXXXXXXXXXAVSIVGSGNLKGFFDLEWPSPTTFDRCSFVGNQASATGGAFESAAGQDAFVGNVFVGNKAGTGGALRMAGTASVENCSFVDNVSDDGEGAALSNIGFISKMAHIYFSDNVFDCPSGTFLDLNASGDPFEAVCAGCDIVCDGCVFEQGLVGPACSEVMAHSTSTGGNTTLQEVSIDRGYWRATSVSEEVLECFQADACLGGVTGTSGYCLEGYEGPYCSICSGGYTKQLGFSCTKCSENKAGGIVVXXXXXXXXXXXXXXXXSYIMSRDDDGGAEGGLVERMARHIPLQSVKIVIVSWQILTQFTSVANVTYPDVYQDFLDAMDVFNFDLSWVFSTGCIFDIDFHDRLLVSTISPLVALSFLACTNAAVARTNRGSPQNLQNNVWQKHVSMGLLLTFLVYSNVSSVLFQSFACEELHDGKNYLRSDYRIECDSSGHKAFQVYAGFMIVLYPVGIPALYAGLLFRDRDVLRKDEINREDPPRVTSTSHLWEPYKPSAFYYE------------------------IAVTLVIAVAFTILSEALDPYSSRWDAWTSRMGHMVVLVSMYVALLLKVDVSDERASSQRVFEAILVAVHACMVTLVVVETIILSVSLRAAKEREAPRPRLS 1200          
BLAST of mRNA_H-canaliculatus_F_contig1440.3442.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI)

HSP 1 Score: 759 bits (1960), Expect = 1.870e-246
Identity = 412/712 (57.87%), Postives = 505/712 (70.93%), Query Frame = 1
Query:  685 GSTALDVTSNPEESTIIINGTTTFVNNTCGANGGVMSLLGR-LSVEIGAVDVRFVNNSAAVAGGAVFVSGTGVGPVFTGVSFISNSAQVGGAVSTVGTGNLQSSGGIAPQNPTTFDGCLFVDNRATATGGAIESAAGQDSFVRSIFKSNRAGTGGALRLAGTASMXXXXXXXXXXXXXXXXXXSNIGAILRIENIFFSDNVFDCESDTFLNFTSVGDPNQVACSGC--PGCDSCFFEESPSVPICSDVPGHSKSTGGNITLETLLIERGYWRATPSSPDIIACYHSDACLGGVTGTAAYCREGYEGPYCSICSNGYAAGLGFVCSRCSESAGGVVLAIALSVLVLLVAAAVVVYVMSGEVSGTRRGMIERVASHIPLHSVKIVVVAWQILTQFASAANVTYPDVYQRFLDGLDVFNFDLGWILSAACVIEVDFHDRLLISTIGPTFVLLFLAGTHAAAKGMHRGDTAALRIIRNKHLSMVLLVTFLVYSSVSSILFKTFACEELDDGNNYLRADYRIECDSSKHKAFAIYAGIMIVVYTVGIPAFYAFLLFRRREVLTRRDDDH------FVSSDLCTSYKPSRFYYELVEFARRICLTGMVVFIYPNTAAQIAITLMMAVVFALISEGLAPYSSLWDCWLNRMGYAVVSVSMYVALLLKVDVSDERAVSQKVFDYVLIAVHACMVLAILAETLLLACSLTLSRED-PSARF 2790
            GS+ +D   N  ES + IN                ++LLG  L VE GA  V F NN+AAVAGGAVFVSG  VGPV + V F +N AQVGGAVSTVG+GNL+   G+AP NPT F  C FV+N+A ATGGA+E+AAGQD FV  +F     GTGGALRLAGTA++                  SNIG+I +++NI +  NVF C    FL+F + GDPN+ AC GC  P  D   FEE P VPIC+    H+ S GG   +  L ++ G+WRATP + D++ CY+++ACL GVT ++  C +GYEGPYCSICS+GY AGL F CS CS+SAGG++LA  L+V+ LLVA AVV YV+S +V    RG +ER+  +IPL S KIVVV+WQILTQF + ANVTYPDVYQRFLDGL VFNFDL W+LSA C++ VDFHDRLLISTIGP   LLFL  T+AAA  ++RG T  L++I N+H+SMVLL+T  VYSSVSS LF+TFACE L DG  YLRADYRI CDSSKHKA  +YAG+M+VVYTVGIPA Y  LLFR R+VL R   D         +S+L   YKPS FYYE++E  RR+ L G+VVFIYPNTA QIAITL+MA  F ++SEGLAPY+S WD WL+RMG+AVV VSMYVALLLKVDVS+ER  SQ+VF+ VL+A HACM+L I+ ET++L C+LT+   D P+ RF
Sbjct: 1349 GSSVMDPEFN-RESNLTINXXXXXXXXXXXXXXXXLALLGGGLHVEFGAAGVVFSNNTAAVAGGAVFVSGADVGPVLSDVLFEANVAQVGGAVSTVGSGNLKEYAGLAPPNPTIFTRCRFVNNQAAATGGAVETAAGQDVFVDCLFXXXXXGTGGALRLAGTATLENCSFVENVSEDGGGAAVSNIGSISKMDNISYRGNVFSCALGMFLDFNASGDPNEAACDGCQTPCDDDGCFEEPPLVPICALAMEHTGSAGGTNNITLLRVDDGFWRATPYAIDVLPCYNANACLAGVTNSSGSCLDGYEGPYCSICSDGYTAGLSFKCSECSDSAGGIILASFLAVVALLVAVAVVSYVVSDKVGEGSRGTVERLGRYIPLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVVLTCALTVGERDGPALRF 2059          
BLAST of mRNA_H-canaliculatus_F_contig1440.3442.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 740 bits (1911), Expect = 7.660e-245
Identity = 535/1433 (37.33%), Postives = 658/1433 (45.92%), Query Frame = 1
Query:    4 LCGYDGGD----------CCLCTCSGNACTSSFFDCLDPSADDELHECEAPPPKPNSCSVDYQRAWVVETTAQANVLAAALNCSGGFFDVEWRQSVAVSQAFRVVDGTTLTIMGTSLEAAIHGNARTRLFTVVNATLHLHSVNLSAGASVAGGAIAAAGSTLVLNQTNFYGNSAAGHGGAVFLSDASSLSCVGGGTI------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FEGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA----------------------AGSTALDVTS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NPEESTIIINGTTTFVNNTCGANGGVMSLLGRLSVEIGAVDVRFVNNSAAVAGGAVFVSGTGVGPVFTGVSFISNSAQVGGAVSTVGTGNLQSSGGIAPQNPTTFDGCLFVDNRATATGGAIESAAGQDSFVRSIFKSNRAGTGGALRLAGTASMXXXXXXXXXXXXXXXXXXSNIGAILRIENIFFSDNVFDCESDTFLNFTSVGDPNQVACSGCPG-CDSCFFEESPSVPICSDVPGHSKSTGGNITLETLLIERGYWRATPSSPDIIACYHSDACLGGVTGTAAYCREGYEGPYCSICSNGYAAGLGFVCSRCSE-SAGGVVLAIALSVLVLLVAAAVVVYVMSGEVS-GTRRGMIERVASHIPLHSVKIVVVAWQILTQFASAANVTYPDVYQRFLDGLDVFNFDLGWILSAACVIEVDFHDRLLISTIGPTFVLLFLAGTHAAAKGMHRGDTAALRIIRNKHLSMVLLVTFLVYSSVSSILFKTFACEELDDGNNYLRADYRIECDSSKHKAFAIYAGIMIVVYTVGIPAFYAFLLFRRREVLTRRDDDHFVS------SDLCTSYKPSRFYYELVEFARRICLTGMVVFIYPNTAAQIAITLMMAVVFALISEGLAPYSSLWDCWLNRMGYAVVSVSMYVALLLKVDVSDERAVSQKVFDYVLIAVHACMVLAILAETLLLACSLTLSREDPSA---RFRVGRISLT 2814
             C YDGGD          CC CTCSG  C S  FDCLDP ADDE +ECEA PP    CS + Q+ WVV+ +AQA  LA+A+NCSGG F+VEWR +V V   F VVDGTTL+I G    AAI GNA TRLFTVVNATLHL  V++++GAS  GGAIAAAG+TL LNQTNF  N+A G+GGA++LSD SS+ C GGG+                                                                                                                                                                                                 FEGN               XXXXXXXXXXXXXXXXXXX                       AG TAL   S                                                                                                                                                                                                                                                                    +   S + INGTT F +N+ G NGG M+L   +++ IG VDV F+ NSA VAG A+FVS   +GP F               +S  G+G  +S        PTTFD C F+ N+A +TGGAI SAAG+D+   S+F+ N AGTGGALRLAG A +                  SNIG I  I N  F  N FDC + TF N T   D  +  C+GC   CD C F E    PIC++V  HS S GGN+TL+TL I+RG+WRA+ SS +++ACYH+DACLGGVTG + YC EGYEGPYC ICS+GY   L F CS+CSE SAGG+ +A+ L++L++ +A AVV YV SGEV  G + G++E V  +IPL S+KIV+V+WQILTQF S ANVTYPDVYQ  LD LDVFNFDL W+LSA CV++++FH RLL+STI P   LL LA T+AAA  ++RG+   L II NKH+++VLL+TF VYSSVSS LF+ FAC++LD   +YLRADY IEC+SS+H+   +YAG MIV+YTVGIPA YA LLF+ R+VL   D D          S+L   YKP+ FYYE++E  RR+ L G+VVFIYPNTAAQIA+TL++A  FAL+SEGLAPY+S WD W++R+G+ VV +SMYVALLLKVDVSDERA SQ+VF+ VL+AVH CM+L +L E  + A SL   R   SA   RFR G+ SLT
Sbjct:   87 FCSYDGGDVSLVACSSLLCCYCTCSGALCQSVTFDCLDPDADDEFYECEAAPPTALPCSAEVQQTWVVDDSAQAQALASAVNCSGGSFEVEWRGTVVVESVFYVVDGTTLSITGDGSSAAIDGNAATRLFTVVNATLHLTGVDVTSGASTTGGAIAAAGATLTLNQTNFLRNTATGNGGAIYLSDGSSMVCSGGGSFTXXXXXXXXXXXXXXXXXXXXXXXSWFGNVAGDSAGAIIVDGESSLSWSEDAIFGFNLAETWGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESNYATSTTSGXXXXXXXXXXXXXXXXXXXXXXXXAAEVIGGAVWVANGSEASCTGDEAISTFSGNSAGHGGAIVSEDSGISFEGNSSFDSNRAVGLAGDTXXXXXXXXXXXXXXXXXXXXXXXXXXVQFGGAIFSLTSQISWAGETALVENSGAVGXXXXXXXXXXXXXXXASFLRNYATEDGXXLYVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGFGGGGMEFSVXXXXXXXXXXTFAHNRAVLGGALYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLIRNGANVXXXXXXXXXXXXXVLGDGGAVATNALSTSNSILFINGTTIFSDNSAGGNGGGMALFVDVALNIGTVDVSFLGNSAGVAGXAMFVSSVSIGPRFNXXXXXXXXXXXXXXISIFGSGTDESG-----DLPTTFDTCQFIGNQAISTGGAINSAAGEDAIENSVFEGNSAGTGGALRLAGEAYISNCSFRENTSDEGEGAAVSNIGFISSITNASFDGNGFDCPAGTFRNVTGSVDHFEAICNGCETTCDGCVFAEGSLAPICTEVMDHSTSDGGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSLREERRSLSAASPRFRSGK-SLT 1513          
BLAST of mRNA_H-canaliculatus_F_contig1440.3442.1 vs. uniprot
Match: D8LIY0_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY0_ECTSI)

HSP 1 Score: 707 bits (1825), Expect = 8.210e-234
Identity = 377/660 (57.12%), Postives = 464/660 (70.30%), Query Frame = 1
Query:  688 STALDVTSNPEESTIIINGTTTFVNNTCGANGGVMSLLGRLSVEIGA-VDVRFVNNSAAVAGGAVFVSGTGVGPVFTGVSFISNSAQVGGAVSTVGTGNLQSSGGIAPQNPTTFDGCLFVDNRATATGGAIESAAGQDSFVRSIFKSNRAGTGGALRLAGTASMXXXXXXXXXXXXXXXXXXSNIGAILRIENIFFSDNVFDCESDTFLNFTSVGDPNQVACSGCPGCDSCF-FEESPSVPICSDVPGHSKSTGGNITLETLLIERGYWRATPSSPDIIACYHSDACLGGVTGTAAYCREGYEGPYCSICSNGYAAGLGFVCSRCSESAGGVVLAIALSVLVLLVAAAVVVYVMSGEVSGTRRGMIERVASHIPLHSVKIVVVAWQILTQFASAANVTYPDVYQRFLDGLDVFNFDLGWILSAACVIEVDFHDRLLISTIGPTFVLLFLAGTHAAAKGMHRGDT-AALRIIRNKHLSMVLLVTFLVYSSVSSILFKTFACEELDDGNNYLRADYRIECDSSKHKAFAIYAGIMIVVYTVGIPAFYAFLLFRRREVLTRRDDDH-------FVSSDLCTSYKPSRFYYELVEFARRICLTGMVVFIYPNTAAQIAITLMMAVVFALISEGLAPYSSLWDCWLNRMGYAVVSVSMYVALLLK 2637
            S  LD   NP EST+  NGTTTF NN CG NGG M+L G  ++ I   + + F+ N+AAV+GGAVFVS  G G  F   SF+SNSAQ+GGAV+T G+G  +    I P NPTTFD C FV NRATATGGAI++AAG D FV + F+ N AGTGGALRLAGTAS+                  SNIG +   E I FS N FDC +  FL +    D  +  C GC        F E   VP+C D+  HS S  G +TLE L I+RGYWRAT +S +++ACYH +ACLGGVTGTA YC EGY+GPYC++CS+G++A  GF C  CS+SAGG+VLA+AL+V  +  A  VV YV SG+ +G  +G++ERVA +IPL SVKIVVVAWQ++TQF   AN+TYPDVYQ FLDGL +FNFDLGWILSA CV +VDFHDRLL+STIGP   ++ LA T+AAA  +HRG T   L+ + +KH+ +VLL++F VYSSVSS LF+TFACE L DG NYLRADYRIECDSS+HK F +YAGIM++VYTVGIP  Y FLL+R R+ L  RD            +SDL   Y+PS FYYE++E  RR+ L G+VVFIYPN+ AQIAITL++A VF LISE L+PY+S WD W++R G+ VV  SMYVALLLK
Sbjct:  703 SPQLDSEYNPSESTLNFNGTTTFFNNRCGGNGGGMALYGGCALVIDTEMGISFIENTAAVSGGAVFVSSAGTGLAFPTTSFVSNSAQIGGAVATFGSGGSKGVEDIEPPNPTTFDRCRFVGNRATATGGAIDTAAGYDFFVDTTFEDNAAGTGGALRLAGTASIINCSFVENYSNDGGGAAVSNIGIVSSAEKINFSGNGFDCPTGMFLAYNESDDLFETVCDGCQTXXXXXAFAEPLLVPMCRDLLEHSTSPDGKLTLEALSIQRGYWRATTTSEEVLACYHPEACLGGVTGTAGYCLEGYQGPYCAVCSHGFSAQFGFTCRECSDSAGGIVLAVALAVAGIFAAVVVVSYVTSGKRNGRGQGIVERVALYIPLQSVKIVVVAWQVVTQFTVVANITYPDVYQTFLDGLKLFNFDLGWILSAGCVTDVDFHDRLLMSTIGPIIAVMVLACTYAAATRIHRGATDTTLQNVWDKHVLVVLLLSFFVYSSVSSTLFRTFACETLGDGKNYLRADYRIECDSSRHKGFEVYAGIMMLVYTVGIPGLYGFLLYRDRDFLKERDTCQEPPPSRVTSTSDLWKPYRPSVFYYEVIECGRRVLLAGVVVFIYPNSGAQIAITLVIAFVFVLISESLSPYASRWDTWISRTGHVVVVTSMYVALLLK 1362          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1440.3442.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHH1_ECTSI1.250e-30955.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G301_ECTSI3.470e-29662.10Polymorphic Outer membrane protein G/I family n=1 ... [more]
D7G2X5_ECTSI3.270e-28140.22Adhesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
D8LSC0_ECTSI1.320e-25758.59Polymorphic Outer membrane protein G/I family n=3 ... [more]
A0A6H5K7Z1_9PHAE2.230e-25538.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2Z8_ECTSI6.090e-25255.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTL7_ECTSI2.090e-24941.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G5Y7_ECTSI1.870e-24657.87Polymorphic Outer membrane protein G/I family n=1 ... [more]
A0A6H5K0E9_9PHAE7.660e-24537.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LIY0_ECTSI8.210e-23457.12Polymorphic Outer membrane protein G/I family n=1 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1440contigH-canaliculatus_F_contig1440:1186..7360 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score890.6
Seed ortholog evalue6.5e-256
Seed eggNOG ortholog2880.D7FHH1
EggNOG OGs2BFIX@1,2S176@2759
Ec32 ortholog descriptionPectin lyase fold/virulence factor
Ec32 orthologEc-00_009390.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size2816
Cds size2814
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1440.3442.1prot_H-canaliculatus_F_contig1440.3442.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1440 1186..7360 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929194.8164854-CDS-H-canaliculatus_F_contig1440:1185..21481622929194.8164854-CDS-H-canaliculatus_F_contig1440:1185..2148Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1440 1186..2148 -
1696845712.4816601-CDS-H-canaliculatus_F_contig1440:1185..21481696845712.4816601-CDS-H-canaliculatus_F_contig1440:1185..2148Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1440 1186..2148 -
1622929194.8336077-CDS-H-canaliculatus_F_contig1440:2587..28411622929194.8336077-CDS-H-canaliculatus_F_contig1440:2587..2841Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1440 2588..2841 -
1696845712.4947612-CDS-H-canaliculatus_F_contig1440:2587..28411696845712.4947612-CDS-H-canaliculatus_F_contig1440:2587..2841Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1440 2588..2841 -
1622929194.8498812-CDS-H-canaliculatus_F_contig1440:3162..34361622929194.8498812-CDS-H-canaliculatus_F_contig1440:3162..3436Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1440 3163..3436 -
1696845712.5064638-CDS-H-canaliculatus_F_contig1440:3162..34361696845712.5064638-CDS-H-canaliculatus_F_contig1440:3162..3436Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1440 3163..3436 -
1622929194.8625946-CDS-H-canaliculatus_F_contig1440:3922..46851622929194.8625946-CDS-H-canaliculatus_F_contig1440:3922..4685Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1440 3923..4685 -
1696845712.5159092-CDS-H-canaliculatus_F_contig1440:3922..46851696845712.5159092-CDS-H-canaliculatus_F_contig1440:3922..4685Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1440 3923..4685 -
1622929194.872365-CDS-H-canaliculatus_F_contig1440:5996..65291622929194.872365-CDS-H-canaliculatus_F_contig1440:5996..6529Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1440 5997..6529 -
1696845712.5244522-CDS-H-canaliculatus_F_contig1440:5996..65291696845712.5244522-CDS-H-canaliculatus_F_contig1440:5996..6529Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1440 5997..6529 -
1622929194.8810468-CDS-H-canaliculatus_F_contig1440:7333..73601622929194.8810468-CDS-H-canaliculatus_F_contig1440:7333..7360Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1440 7334..7360 -
1696845712.5344584-CDS-H-canaliculatus_F_contig1440:7333..73601696845712.5344584-CDS-H-canaliculatus_F_contig1440:7333..7360Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1440 7334..7360 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1440.3442.1

>prot_H-canaliculatus_F_contig1440.3442.1 ID=prot_H-canaliculatus_F_contig1440.3442.1|Name=mRNA_H-canaliculatus_F_contig1440.3442.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=938bp
ALCGYDGGDCCLCTCSGNACTSSFFDCLDPSADDELHECEAPPPKPNSCS
VDYQRAWVVETTAQANVLAAALNCSGGFFDVEWRQSVAVSQAFRVVDGTT
LTIMGTSLEAAIHGNARTRLFTVVNATLHLHSVNLSAGASVAGGAIAAAG
STLVLNQTNFYGNSAAGHGGAVFLSDASSLSCVGGGTIFEGNAALSGGAL
HLMNGSFVHWTGTATFASNHAAGDGGAAGSTALDVTSNPEESTIIINGTT
TFVNNTCGANGGVMSLLGRLSVEIGAVDVRFVNNSAAVAGGAVFVSGTGV
GPVFTGVSFISNSAQVGGAVSTVGTGNLQSSGGIAPQNPTTFDGCLFVDN
RATATGGAIESAAGQDSFVRSIFKSNRAGTGGALRLAGTASMDNCSFVEN
VSDEGGGTAVSNIGAILRIENIFFSDNVFDCESDTFLNFTSVGDPNQVAC
SGCPGCDSCFFEESPSVPICSDVPGHSKSTGGNITLETLLIERGYWRATP
SSPDIIACYHSDACLGGVTGTAAYCREGYEGPYCSICSNGYAAGLGFVCS
RCSESAGGVVLAIALSVLVLLVAAAVVVYVMSGEVSGTRRGMIERVASHI
PLHSVKIVVVAWQILTQFASAANVTYPDVYQRFLDGLDVFNFDLGWILSA
ACVIEVDFHDRLLISTIGPTFVLLFLAGTHAAAKGMHRGDTAALRIIRNK
HLSMVLLVTFLVYSSVSSILFKTFACEELDDGNNYLRADYRIECDSSKHK
AFAIYAGIMIVVYTVGIPAFYAFLLFRRREVLTRRDDDHFVSSDLCTSYK
PSRFYYELVEFARRICLTGMVVFIYPNTAAQIAITLMMAVVFALISEGLA
PYSSLWDCWLNRMGYAVVSVSMYVALLLKVDVSDERAVSQKVFDYVLIAV
HACMVLAILAETLLLACSLTLSREDPSARFRVGRISLT
back to top

mRNA from alignment at H-canaliculatus_F_contig1440:1186..7360-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1440.3442.1 ID=mRNA_H-canaliculatus_F_contig1440.3442.1|Name=mRNA_H-canaliculatus_F_contig1440.3442.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6175bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1440:1186..7360- (Hapterophycus canaliculatus Oshoro5f female)
GCTTTATGCGGCTACGACGGGGGTGATGTGAGTCCATCTATGGTTAGCGC GATGGTGACATTGATTGTTTGCACCGTATGCGACGAACTGCAGACTGTCC TTGGGCGACTTCTGATGGCCAATAATAACAGCTGGGGTGAGTTCGTTTCG GGGCGCATGGCGGTCGTGGAGACTGCATATAATCGTCGCGAGGTATGCCC TCTCCATGACGAGGCTCCATTCGATGTATCCTTTGGCGGATGTGTTCGTG GCACACATGACGTGGGGGATATAGCTGCCCTTCTCCGACACAAATAGCTG CTCCGCCACTGACACGATCTCGAGATGGGCAATACCAAATACTACCTGGA CTGCGGTGAATTATTTCACGTACTTGAAGTCTTCACGTTTCCTTTCAGGA TGTATTATTGGAGAGCTTTCAATATCATTAATTGTGTGGCTAATTAGTAG TTCACGATGATCACAAGTTCATGTTCAAAGTACTGCCTTCGTTGCATTTC ATACAACTGCGGCAAGGTACACAAAACACTGTCCTGTTCATGTATTTGTC CCCATCAACGAACCCTCACTGTTTGACTTCGCACGACGTACCTGAGGAGG TGTTCTAACGGTGTTGTTATATTTTCTTTCAAATGGTGCAAAGCAAAAGG GTTACTCGTATGACATGGCAGAGGCTTCAGAGCACCGGTATATACTTGGT GTTCGTGAAAAGAGGAGGAATGTTGGCTGAATCGACGAGTGATGAATGTA GAAACGGCAGAATGACACATAAGTTGACCATGCCTCCGCCGTTTCGTCCT CGCCTGATGTTCTACGCAAATGTTCACACAGTGCTGCCTGTGTACCTGCA GTGGAAACGCGTGCACGTCTAGCTTCTTCGATTGTTTGGACCCCAGCGCT GATGACGAGTTGCACGAATGCGAGGCTCCACCCCCTAAACCTAATTCTTG CTCAGTGGATTATCAGCGGGCATGGGTGGTGGAAACCACAGCACAGGCAA ACGTTCTGGCGGCGGCCCTGAATTGCTCCGGCGGATTCTTCGACGTGGAG TGGAGACAGAGCGTTGCCGTGAGCCAGGCATTCCGTGTGGTGGACGGGAC GACTCTCACGATCATGGGGACTAGCTTGGAGGCCGCAATTCATGGTAACG CCAGGACACGGCTTTTCACCGTCGTCAACGCTACGCTGCATTTGCACAGC GTGAACCTGAGCGCCGGCGCTAGCGTTGCCGGCGGAGCAATAGCTGCGGC AGGGTCCACCTTGGTGCTGAATCAAACAAACTTCTATGGAAATAGTGCTG CCGGCCACGGGGGCGCGGTCTTTTTGTCCGATGCTTCCAGCCTCTCTTGT GTTGGGGGTGGGACGTTTGCTAACAACGAGGCAGACTTCGACGGTGGTGC CATGTATGTAAGTGGCGGTTCGGCGGTCTCCTGCAGCGTTTCATGGGTCA ACAACTCGGCCGCCGCTCGGGGGGGCGCTTTGAGCGTGCACGATGTCTCC AGTGTGATTTGGAGCGACGAGTCCACATTTTTTAACAACTCCGCCGGGAC CTATGGCGGGGCGCTGTACGTCTTCAATGGAACGCGCGTGTTCTGTAGCG GTCCCACAACATTATTTGGCAATGATGCTGGGGTAAGCGGGGGCGCCGTG AACATCTTCGACGGCTCAAGCCTCTCGTGGAACGCCACCACAGGGTTCTA CTTTAACAGTGCTAGGTCCGGAGGCGGGGGGGCTGTGTCGCTTTCACACC ATTCCAATGTCTCATGGACTGGGGCATCGACATTTTCCAGCAACTCTGCA ACTAGAGGTGGCGGACTATACGTTGAAGACCACTGCTTCGCGTCGTGGGC CGTGTCAACAACGGTGTTTCTGCAAAATGAGGCCACCGAGTACAGTGGTG CCGTCCATGTTGTCGAAAGCTCAACTATATCGTGGGGTGGAGAAGCAAAA ACCGTGTTTCGAGGAAATCGAGCTGGAGACGGCGGCGGGGCGGTTGTGAT CGTCGCGGACTCTCGTATGTCGTCCTTCGCCGGAACCGTCACCACGTTTG CCAACAACTCGGCTAGTACGGATGGTGGCGCTATTTTGCTGGCATCAAAC TCCATGTCTTCCTTCGATGGCAATACGTCTTTCGATGATAACCGCGCTCT CGGTGATGCCGACACGGGTGGACGCGGTGGTGCCTTCTGCGTACTTTTTA ACTCCATTGTTTCGTGGGGCGGCGTGATGATGTTCACCAGAAACACGGCT CGGGAGGGGGGTGCTTTGCACGTTTCGAACGGCACCATAACGTGGAAGGG AAAGACGATATGGGCACAAAACAGCGCGGTTTCGCAAGGCGGAGGCCTCT TTGCTGCGTTTTCGAGCGTGTCGTGGAGTGGAAGCACAGCGTTCTTGGAA AATTCGGCCCACTCTAATGGGTCCTTTGCCGCTACTCCTGTCGATGACGG GGCATATGGTGGGGCTCTTGCCGCTTTGTTGACCAACATTTCATGGAGTG GGAACTCCACACTATTTTCCGGGAACCATGCCGCAATGGCCGGCGGTGCT GTTTTGGTGTATGGTGGCTCCGCTGTACTGTGGAGCGGAGACACCGTATA CGAGAATAACCTTGCCGACGTGGGAGGGGCAATTTCCACGATTGGCTCCA GTGTGGGTTGGAGCGGTTGTGCGAGTATCTTCGAAGGAAATGCCGCTCTG TCCGGGGGTGCTCTCCACCTGATGAACGGATCGTTTGTACACTGGACTGG GACCGCCACTTTTGCTTCAAACCATGCAGCTGGTGACGGAGGTGCAGCAG GGTCAACGGCGTTGGACGTCACATCGAATCCCGAGGAGTCGACCATCATT ATCAATGGAACCACTACTTTTGTCAACAATACGTGCGGGGCAAACGGGGG CGTAATGTCTCTGTTGGGGAGGCTGTCGGTTGAAATAGGTGCAGTGGACG TACGTTTTGTCAACAACTCCGCTGCTGTCGCAGGAGGAGCCGTCTTCGTG TCTGGTACAGGAGTCGGCCCGGTGTTTACCGGTGTAAGCTTTATCTCGAA CTCTGCGCAGGTCGGAGGCGCTGTCTCTACGGTGGGGACTGGGAACTTGC AGAGTAGCGGTGGCATCGCACCACAAAACCCGACAACGTTCGACGGCTGT CTGTTCGTCGACAACCGGGCAACGGCAACGGGTGGAGCGATCGAGAGTGC AGCTGGGCAAGACAGTTTTGTCAGAAGTATTTTCAAGAGCAACAGGGCGG GCACCGGAGGAGCTTTGCGACTTGCTGGCACGGCATCGATGGACAACTGC TCGTTCGTGGAAAACGTTTCAGACGAAGGGGGCGGCACAGCAGTGTCCAA CATTGGGGCAATTCTGAGGATTGAAAATATATTCTTCAGCGACAACGTTT TCGATTGCGAATCAGATACATTCCTGAATTTTACCTCGGTAAGCACAAGT TAGATCGATCGTGTTTCCATTTACAGTCCTTGGCTGTGTCAAGGTTGAGT CACGCCCGAACATTTCCGCCCACTGTTTTGTTCCCCCTTCCATGAAGAGG TACAGATCGAAGTAGATAATGGTTCCGGCAGGAGGCTTTTGTTCTAGGGG GCCTACAGTGCGTTTCTTTAGGATTGGCAAGTGTCGCTATGCCGTTCCAC CAGTAGCCAGTGCTAGCATACAGGTGGGCTTGAGCTGCGTTCATGTTTCG AGTAATTTAACCCCCCGACGCTTGGACTGCCTTTTATTTTCCCCATATAT ATGTCGTTGTGCCCTCAGCAGCAACGGAATTTCTGGTTATTGATGGCACC GTCTAACACCACGGCAATTTTTCGTCTCGCTTTCCATAATCTTGCCGAGA TCATTTGTGCCCGCTTCGCCTTTGGTTCATTTTGTGGTAACAAAAGCCTG CCTTGCCTGCCGACTCTGCAATAGGTTGGTGACCCGAACCAGGTCGCATG CAGTGGATGTCCTGGTTGTGACAGCTGCTTCTTCGAAGAATCCCCTTCGG TCCCGATTTGCTCGGACGTGCCAGGTCATTCTAAAAGTACCGGCGGCAAC ATAACTCTGGAAACTCTCTTGATCGAGCGGGGGTACTGGCGAGCCACTCC ATCTAGCCCAGACATTATCGCGTGCTATCATTCCGACGCTTGCCTCGGAG GAGTAACGGGAACCGCTGCCTACTGCCGGGAGGGCTACGAAGGGCCATGT GAGAAAGCCTCTGGGAGGATTCGTATCGTTCAACAACTTACATCGCACTT GACTACAAAATTGACCGCCCTGTGGCATGTGCCAATTCTTGAATAGTCTC ATGTGGGGATTACCATGTCCGGAAGAACCGTCGAGTGTCTCCATGCGGCA AGTTGCACGAACAAGTTCTCAGCATCTACCACACCACCACCATAGGTATT TGTTCGCTGAAAGGCCAAGCTTGTCCCCGGTCATTGTTTTAAGGTTTCCC ACCACGTGACTAAACGACGTTCCCGTAACACTTCCTGATGAAGTTCTCCG GTTGTGTCGGCTTGGACAGACTGTTCTATTTGCAGCAATGGGTACGCCGC AGGACTGGGGTTCGTCTGCAGCAGGTGCTCTGAAAGCGCGGGGGGTGTTG TGCTGGCGATTGCCCTTTCCGTGCTGGTCCTACTGGTTGCGGCTGCCGTG GTCGTGTACGTCATGTCAGGAGAGGTTAGCGGCACGAGGAGAGGGATGAT CGAGCGCGTGGCCAGTCACATCCCGCTTCACTCTGTTAAGATCGTCGTCG TGGCGTGGCAGATCTTGACACAGGTAAGAAACTTTTCCCCCGACGAACCA GCTACGTGATAGAGGAGAGCACCATACTTGTGACCTATGGAAAGTTTGTG AGAGTGAGGATCGTGGCGCCGCGAAAGGCCGCAGTATGGAGGTCCCCTGC CGCTCCAAATCAAAGTCGGACCGACAAACATTATGTTGGGGGGGCGTTTG CCACACACTCCCTTGAACTTGGCAACAATACGTGTCGAACTTTCTTTCCC GAAGAGGTCCGTGGGAGCAGCTGCATACATGGTGGTCTCCATGAAAGTAT TCCATCTTTGAATGATGCATGCCATCCTTCCCGTATTTCGATGCATGACC ATCGTAAAAATTTGACTGTTGTTTGGCATGGTAACATAAATGCTGCGCAA GTCCCCAAACGTTTCTGAATCCGCTGCCCTTCGATCTCACGACTCCGTAC ACGTACATGCAGTTTGCTTCTGCGGCGAACGTCACGTACCCGGACGTATA CCAGCGCTTTCTGGACGGTCTGGACGTGTTCAATTTCGACTTGGGCTGGA TCTTGTCCGCTGCGTGTGTCATCGAAGTGGACTTTCACGACCGACTGCTG ATTTCTACGATAGGTCCTACATTCGTTTTGTTATTTCTGGCTGGAACCCA TGCCGCCGCCAAAGGGATGCACCGAGGAGATACCGCCGCCCTACGTATCA TCAGGAACAAGCACTTATCCATGGTGCTCCTCGTTACCTTTTTAGTGTAC TCAAGCGTCAGCTCCATCCTGTTCAAGACGTTCGCATGCGAGGAGCTCGA TGATGGCAATAACTACTTGAGAGCAGACTACCGCATCGAGTGCGACTCTT CCAAGCACAAAGCTTTCGCGATTTACGCAGGTATCATGATCGTGGTGTAC ACGGTGGGTATCCCCGCGTTCTACGCTTTTCTCCTTTTCAGGCGCCGCGA GGTGTTGACGCGTCGAGACGATGATCATTTTGTCAGTTCGGACTTGTGTA CGTCGTACAAGCCATCGAGATTCTACTACGAGCTAGTTGAATTCGCCAGA CGGATTTGCCTCACCGGAATGGTAGTTTTCATCTACCCCAACACGGCCGC CCAGATCGCGATAACTCTCATGATGGCGGTCGTGTTCGCACTGATTTCGG AAGGGCTAGCCCCGTATTCGTCACTGTGGGACTGCTGGCTAAACCGCATG GGCTATGCGGTTGTTTCTGTGAGCATGTACGTCGCCCTACTGTTGAAGGT AGATGTGTCCGATGAGCGAGCTGTGAGTCAGAAGGTGTTTGATTATGTCC TCATAGCCGTTCACGCTTGCATGGTGCTGGCTATACTTGCTGAGACACTC TTATTGGCATGCTCGTTGACATTGTCTCGAGAAGATCCTTCGGCCAGGTT CCGCGTGGGTAGGATCTCGCTTACG
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1440:1186..7360-

>mRNA_H-canaliculatus_F_contig1440.3442.1 ID=mRNA_H-canaliculatus_F_contig1440.3442.1|Name=mRNA_H-canaliculatus_F_contig1440.3442.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=5628bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1440:1186..7360- (Hapterophycus canaliculatus Oshoro5f female)
GCTTTATGCGGCTACGACGGGGGTGATGCTTTATGCGGCTACGACGGGGG
TGATTGCTGCCTGTGTACCTGCAGTGGAAACGCGTGCACGTCTAGCTTCT
TCGATTGTTTGGACCCCAGCGCTGATGACGAGTTGCACGAATGCGAGGCT
CCACCCCCTAAACCTAATTCTTGCTCAGTGGATTATCAGCGGGCATGGGT
GGTGGAAACCACAGCACAGGCAAACGTTCTGGCGGCGGCCCTGAATTGCT
CCGGCGGATTCTTCGACGTGGAGTGGAGACAGAGCGTTGCCGTGAGCCAG
GCATTCCGTGTGGTGGACGGGACGACTCTCACGATCATGGGGACTAGCTT
GGAGGCCGCAATTCATGGTAACGCCAGGACACGGCTTTTCACCGTCGTCA
ACGCTACGCTGCATTTGCACAGCGTGAACCTGAGCGCCGGCGCTAGCGTT
GCCGGCGGAGCAATAGCTGCGGCAGGGTCCACCTTGGTGCTGAATCAAAC
AAACTTCTATGGAAATAGTGCTGCCGGCCACGGGGGCGCGGTCTTTTTGT
CCGATGCTTCCAGCCTCTCTTGTGTTGGGGGTGGGACTGCTGCCTGTGTA
CCTGCAGTGGAAACGCGTGCACGTCTAGCTTCTTCGATTGTTTGGACCCC
AGCGCTGATGACGAGTTGCACGAATGCGAGGCTCCACCCCCTAAACCTAA
TTCTTGCTCAGTGGATTATCAGCGGGCATGGGTGGTGGAAACCACAGCAC
AGGCAAACGTTCTGGCGGCGGCCCTGAATTGCTCCGGCGGATTCTTCGAC
GTGGAGTGGAGACAGAGCGTTGCCGTGAGCCAGGCATTCCGTGTGGTGGA
CGGGACGACTCTCACGATCATGGGGACTAGCTTGGAGGCCGCAATTCATG
GTAACGCCAGGACACGGCTTTTCACCGTCGTCAACGCTACGCTGCATTTG
CACAGCGTGAACCTGAGCGCCGGCGCTAGCGTTGCCGGCGGAGCAATAGC
TGCGGCAGGGTCCACCTTGGTGCTGAATCAAACAAACTTCTATGGAAATA
GTGCTGCCGGCCACGGGGGCGCGGTCTTTTTGTCCGATGCTTCCAGCCTC
TCTTGTGTTGGGGGTGGGACTATCTTCGAAGGAAATGCCGCTCTGTCCGG
GGGTGCTCTCCACCTGATGAACGGATCGTTTGTACACTGGACTGGGACCG
CCACTTTTGCTTCAAACCATGCAGCTGGTGACGGAGGTGCAGCAGGGTCA
ACGGCGTTGGACGTCACATCGAATCCCGAGGAGTCGACCATCATTATCAA
TGGAACCACTACTTTTGTCAACAATACGTGCGGGGCAAACGGGGGCGTAA
TGTCTCTGTTGGGGAGGCTGTCGGTTGAAATAGGTGCAGTGGACGTACGT
TTTGTCAACAACTCCGCTGCTGTCGCAGGAGGAGCCGTCTTCGTGTCTGG
TACAGGAGTCGGCCCGGTGTTTACCGGTGTAAGCTTTATCTCGAACTCTG
CGCAGGTCGGAGGCGCTGTCTCTACGGTGGGGACTGGGAACTTGCAGAGT
AGCGGTGGCATCGCACCACAAAACCCGACAACGTTCGACGGCTGTCTGTT
CGTCGACAACCGGGCAACGGCAACGGGTGGAGCGATCGAGAGTGCAGCTG
GGCAAGACAGTTTTGTCAGAAGTATTTTCAAGAGCAACAGGGCGGGCACC
GGAGGAGCTTTGCGACTTGCTGGCACGGCATCGATGGACAACTGCTCGTT
CGTGGAAAACGTTTCAGACGAAGGGGGCGGCACAGCAGTGTCCAACATTG
GGGCAATTCTGAGGATTGAAAATATATTCTTCAGCGACAACGTTTTCGAT
TGCGAATCAGATACATTCCTGAATTTTACCTCGTATCTTCGAAGGAAATG
CCGCTCTGTCCGGGGGTGCTCTCCACCTGATGAACGGATCGTTTGTACAC
TGGACTGGGACCGCCACTTTTGCTTCAAACCATGCAGCTGGTGACGGAGG
TGCAGCAGGGTCAACGGCGTTGGACGTCACATCGAATCCCGAGGAGTCGA
CCATCATTATCAATGGAACCACTACTTTTGTCAACAATACGTGCGGGGCA
AACGGGGGCGTAATGTCTCTGTTGGGGAGGCTGTCGGTTGAAATAGGTGC
AGTGGACGTACGTTTTGTCAACAACTCCGCTGCTGTCGCAGGAGGAGCCG
TCTTCGTGTCTGGTACAGGAGTCGGCCCGGTGTTTACCGGTGTAAGCTTT
ATCTCGAACTCTGCGCAGGTCGGAGGCGCTGTCTCTACGGTGGGGACTGG
GAACTTGCAGAGTAGCGGTGGCATCGCACCACAAAACCCGACAACGTTCG
ACGGCTGTCTGTTCGTCGACAACCGGGCAACGGCAACGGGTGGAGCGATC
GAGAGTGCAGCTGGGCAAGACAGTTTTGTCAGAAGTATTTTCAAGAGCAA
CAGGGCGGGCACCGGAGGAGCTTTGCGACTTGCTGGCACGGCATCGATGG
ACAACTGCTCGTTCGTGGAAAACGTTTCAGACGAAGGGGGCGGCACAGCA
GTGTCCAACATTGGGGCAATTCTGAGGATTGAAAATATATTCTTCAGCGA
CAACGTTTTCGATTGCGAATCAGATACATTCCTGAATTTTACCTCGGTTG
GTGACCCGAACCAGGTCGCATGCAGTGGATGTCCTGGTTGTGACAGCTGC
TTCTTCGAAGAATCCCCTTCGGTCCCGATTTGCTCGGACGTGCCAGGTCA
TTCTAAAAGTACCGGCGGCAACATAACTCTGGAAACTCTCTTGATCGAGC
GGGGGTACTGGCGAGCCACTCCATCTAGCCCAGACATTATCGCGTGCTAT
CATTCCGACGCTTGCCTCGGAGGAGTAACGGGAACCGCTGCCTACTGCCG
GGAGGGCTACGAAGGGCCATGTTGGTGACCCGAACCAGGTCGCATGCAGT
GGATGTCCTGGTTGTGACAGCTGCTTCTTCGAAGAATCCCCTTCGGTCCC
GATTTGCTCGGACGTGCCAGGTCATTCTAAAAGTACCGGCGGCAACATAA
CTCTGGAAACTCTCTTGATCGAGCGGGGGTACTGGCGAGCCACTCCATCT
AGCCCAGACATTATCGCGTGCTATCATTCCGACGCTTGCCTCGGAGGAGT
AACGGGAACCGCTGCCTACTGCCGGGAGGGCTACGAAGGGCCATACTGTT
CTATTTGCAGCAATGGGTACGCCGCAGGACTGGGGTTCGTCTGCAGCAGG
TGCTCTGAAAGCGCGGGGGGTGTTGTGCTGGCGATTGCCCTTTCCGTGCT
GGTCCTACTGGTTGCGGCTGCCGTGGTCGTGTACGTCATGTCAGGAGAGG
TTAGCGGCACGAGGAGAGGGATGATCGAGCGCGTGGCCAGTCACATCCCG
CTTCACTCTGTTAAGATCGTCGTCGTGGCGTGGCAGATCTTGACACAGAC
TGTTCTATTTGCAGCAATGGGTACGCCGCAGGACTGGGGTTCGTCTGCAG
CAGGTGCTCTGAAAGCGCGGGGGGTGTTGTGCTGGCGATTGCCCTTTCCG
TGCTGGTCCTACTGGTTGCGGCTGCCGTGGTCGTGTACGTCATGTCAGGA
GAGGTTAGCGGCACGAGGAGAGGGATGATCGAGCGCGTGGCCAGTCACAT
CCCGCTTCACTCTGTTAAGATCGTCGTCGTGGCGTGGCAGATCTTGACAC
AGTTTGCTTCTGCGGCGAACGTCACGTACCCGGACGTATACCAGCGCTTT
CTGGACGGTCTGGACGTGTTCAATTTCGACTTGGGCTGGATCTTGTCCGC
TGCGTGTGTCATCGAAGTGGACTTTCACGACCGACTGCTGATTTCTACGA
TAGGTCCTACATTCGTTTTGTTATTTCTGGCTGGAACCCATGCCGCCGCC
AAAGGGATGCACCGAGGAGATACCGCCGCCCTACGTATCATCAGGAACAA
GCACTTATCCATGGTGCTCCTCGTTACCTTTTTAGTGTACTCAAGCGTCA
GCTCCATCCTGTTCAAGACGTTCGCATGCGAGGAGCTCGATGATGGCAAT
AACTACTTGAGAGCAGACTACCGCATCGAGTGCGACTCTTCCAAGCACAA
AGCTTTCGCGATTTACGCAGGTATCATGATCGTGGTGTACACGGTGGGTA
TCCCCGCGTTCTACGCTTTTCTCCTTTTCAGGCGCCGCGAGGTGTTGACG
CGTCGAGACGATGATCATTTTGTCAGTTCGGACTTGTGTACGTCGTACAA
GCCATCGAGATTCTACTACGAGCTAGTTGAATTCGCCAGACGGATTTGCC
TCACCGGAATGGTAGTTTTCATCTACCCCAACACGGCCGCCCAGATCGCG
ATAACTCTCATGATGGCGGTCGTGTTCGCACTGATTTCGGAAGGGCTAGC
CCCGTATTCGTCACTGTGGGACTGCTGGCTAAACCGCATGGGCTATGCGG
TTGTTTCTGTGAGCATGTACGTCGCCCTACTGTTGAAGGTAGATGTGTCC
GATGAGCGAGCTGTGAGTCAGAAGGTGTTTGATTATGTCCTCATAGCCGT
TCACGCTTGCATGGTGCTGGCTATACTTGCTGAGACACTCTTATTGGCAT
GCTCGTTGACATTGTCTCGAGAAGATCCTTCGGCCAGGTTCCGCGTGGGT
AGGATCTCGCTTACGTTTGCTTCTGCGGCGAACGTCACGTACCCGGACGT
ATACCAGCGCTTTCTGGACGGTCTGGACGTGTTCAATTTCGACTTGGGCT
GGATCTTGTCCGCTGCGTGTGTCATCGAAGTGGACTTTCACGACCGACTG
CTGATTTCTACGATAGGTCCTACATTCGTTTTGTTATTTCTGGCTGGAAC
CCATGCCGCCGCCAAAGGGATGCACCGAGGAGATACCGCCGCCCTACGTA
TCATCAGGAACAAGCACTTATCCATGGTGCTCCTCGTTACCTTTTTAGTG
TACTCAAGCGTCAGCTCCATCCTGTTCAAGACGTTCGCATGCGAGGAGCT
CGATGATGGCAATAACTACTTGAGAGCAGACTACCGCATCGAGTGCGACT
CTTCCAAGCACAAAGCTTTCGCGATTTACGCAGGTATCATGATCGTGGTG
TACACGGTGGGTATCCCCGCGTTCTACGCTTTTCTCCTTTTCAGGCGCCG
CGAGGTGTTGACGCGTCGAGACGATGATCATTTTGTCAGTTCGGACTTGT
GTACGTCGTACAAGCCATCGAGATTCTACTACGAGCTAGTTGAATTCGCC
AGACGGATTTGCCTCACCGGAATGGTAGTTTTCATCTACCCCAACACGGC
CGCCCAGATCGCGATAACTCTCATGATGGCGGTCGTGTTCGCACTGATTT
CGGAAGGGCTAGCCCCGTATTCGTCACTGTGGGACTGCTGGCTAAACCGC
ATGGGCTATGCGGTTGTTTCTGTGAGCATGTACGTCGCCCTACTGTTGAA
GGTAGATGTGTCCGATGAGCGAGCTGTGAGTCAGAAGGTGTTTGATTATG
TCCTCATAGCCGTTCACGCTTGCATGGTGCTGGCTATACTTGCTGAGACA
CTCTTATTGGCATGCTCGTTGACATTGTCTCGAGAAGATCCTTCGGCCAG
GTTCCGCGTGGGTAGGATCTCGCTTACG
back to top