mRNA_H-canaliculatus_F_contig1438.3427.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1438.3427.1
Unique NamemRNA_H-canaliculatus_F_contig1438.3427.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1438.3427.1 vs. uniprot
Match: D7FHZ0_ECTSI (Phosphorylated adapter RNA export protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHZ0_ECTSI)

HSP 1 Score: 278 bits (712), Expect = 9.080e-82
Identity = 200/349 (57.31%), Postives = 231/349 (66.19%), Query Frame = 1 
Query:   82 DQDDFLTGKLAALGIDEDLELSGGEEENEDPSPAAATVAPTKHPSDMASIAPPRSPSASKSAPTAAAAAAN-------VEDWGA----ASQPASA----ENEPRGKASARPGAHEAGQFAEGGREWGALEDGELLGMIERPLKASRGRPQQQQERQQREFDRDNGRNGRGXGGRNXXXXXXXXXXRPKNNGRAQGRNVTIKECAEWMCERLGETKYYLMCRVVSTIGYNKTRALLETVQATQEAGGMPTADGSRKRTAGGVFFTLLKQHMEPAKLKELYADEIRVKKEKERARRSEXXXXXXXXXXGDDVMTPRDXXXXXXXXXXXXXGAATRAGRDMGTWASPSDGFG 1083
            D DDFLTGKLAALGIDEDLELSGGEEE+++ +PA    A + +      I  P    AS S   AA  AA+        +DWGA       P  A    E +  G+        EA   A GGR   A+EDGEL+ MI++PL+ SRGR Q+          RD+GR G   G   XXXXX     RPK +G+A+GRNVTIKECAEW+CERLGE KYYLMC+VVSTIGYNKTR LLE VQ TQE GGMPTADGSRKRTAGGVFFTLLK+HMEP++LKELYADE+RVKKEK+RARR+           G+DVMTPR+     XXXXXXXX  ATRAGRDMG WA P+ G G
Sbjct:   16 DGDDFLTGKLAALGIDEDLELSGGEEEDDNRAPATDPAADSSN--KPPGIVAPSPQQASASTAVAAVPAASRSTAPAPADDWGAPPSEGCSPGDAGIWGEVDSWGETRIATPTVEAPPAAGGGRGT-AVEDGELVQMIDQPLRTSRGREQRSA--------RDSGRGG---GXXXXXXXXRGKRGRPKKDGKARGRNVTIKECAEWVCERLGEPKYYLMCQVVSTIGYNKTRDLLEAVQETQETGGMPTADGSRKRTAGGVFFTLLKKHMEPSRLKELYADELRVKKEKDRARRAANKRKAEAALAGEDVMTPRNPPRNRXXXXXXXX-XATRAGRDMGKWAGPTAGAG 349
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BLAST of mRNA_H-canaliculatus_F_contig1438.3427.1 vs. uniprot
Match: D7FHZ1_ECTSI (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHZ1_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 1.670e-20
Identity = 50/72 (69.44%), Postives = 53/72 (73.61%), Query Frame = -2 
Query: 2267 LDAARLPSQEERLTPTEIAYDRPSPKLKPFLAKHFGLHNCLDQPNRFMVFTEHFGLAAAXXXXXXSLEQQAG 2482
            LD  +   +EE LTPTEIAYDRPSPKLKPFL KHFGLHNCLDQPNRFMVF EHF  AA         +QQAG
Sbjct:   25 LDLFKSALKEEGLTPTEIAYDRPSPKLKPFLGKHFGLHNCLDQPNRFMVFKEHFEGAAKRS------KQQAG 90
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BLAST of mRNA_H-canaliculatus_F_contig1438.3427.1 vs. uniprot
Match: A0A835Z9U1_9STRA (Alpha-tubulin N-acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9U1_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 2.090e-8
Identity = 27/46 (58.70%), Postives = 37/46 (80.43%), Query Frame = -2 
Query: 2321 QEERLTPTEIAYDRPSPKLKPFLAKHFGLHNCLDQPNRFMVFTEHF 2458
            + E +T  ++AYDRPSPKL+PFL +H+GL   +DQPNRFMVF ++F
Sbjct:  132 KSENVTAEQLAYDRPSPKLRPFLKRHYGLAQGIDQPNRFMVFPQYF 177
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BLAST of mRNA_H-canaliculatus_F_contig1438.3427.1 vs. uniprot
Match: A9TJL2_PHYPA (Phosphorylated adapter RNA export protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TJL2_PHYPA)

HSP 1 Score: 68.6 bits (166), Expect = 2.190e-8
Identity = 39/101 (38.61%), Postives = 56/101 (55.45%), Query Frame = 1 
Query:  622 RNVTIKECAEWMCERLGETKYYLMCRVVSTIGYNKTRALLETVQATQEAGGMPTADGSRKRTAGGVFFTLLKQHMEPAKLKELYADEIRVKKEKERARRSE 924
            + V I+      C R+ ETKY L    V  IG    + LL  V A Q+ GG  TADG R+R+AGGV + LL+ H+ P   KE+  +  R   E+++A++ E
Sbjct:  113 KTVIIERFVVQTCRRIEETKYPLFREAVDRIGIEAMKGLLNQVDAIQKCGGQMTADGLRRRSAGGVLWNLLRDHVGPVLYKEIMKEGNRKHIEQQKAKQKE 213
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BLAST of mRNA_H-canaliculatus_F_contig1438.3427.1 vs. uniprot
Match: A0A8J2X059_9STRA (Phosphorylated adapter RNA export protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X059_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 4.290e-7
Identity = 42/105 (40.00%), Postives = 51/105 (48.57%), Query Frame = 1 
Query:  667 LGETKYYLMCRVVSTIGYNKTRALLETVQATQEAGGMPTADGSRKRTAGGVFFTLLKQHMEPAKLKELY-ADEIRVKKEKERARRSEXXXXXXXXXXGDDVMTPR 978
            L E    L+   +  IG    + LL+ V  TQ  GG+ TADGSRKRT GGVFF LL+  M P   K+L  AD  R K+E E  R+            G D    R
Sbjct:   95 LDEQNIRLLREAIIAIGAKAAKRLLKRVVETQRDGGLATADGSRKRTPGGVFFHLLRDEMTPEAYKQLMKADSKRKKRELEERRKQREKRAREGGTPGGDAKRGR 199
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BLAST of mRNA_H-canaliculatus_F_contig1438.3427.1 vs. uniprot
Match: UPI001069D661 (uncharacterized protein LOC114518314 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI001069D661)

HSP 1 Score: 63.9 bits (154), Expect = 4.910e-7
Identity = 35/84 (41.67%), Postives = 53/84 (63.10%), Query Frame = 1 
Query:  655 MCERLGETKYYLMCRVVSTIGYNKTRALLETVQATQEAGGMPTADGSRKRTAGGVFFTLLKQ--HMEPAKLKELYADEIRVKKE 900
            + ERL E K+ L+   V  IG  K   L +  +  Q +GGM T +GSR+RT+GGVFFTLLK   +    ++KE++ +++ +KKE
Sbjct:  146 IAERLEEHKFALIIETVKVIGGKKVLELFKETKRIQLSGGMKTCNGSRRRTSGGVFFTLLKSSNYATDEQIKEIFKEDLTMKKE 229
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BLAST of mRNA_H-canaliculatus_F_contig1438.3427.1 vs. uniprot
Match: Q017X4_OSTTA (Phosphorylated adapter RNA export protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q017X4_OSTTA)

HSP 1 Score: 63.2 bits (152), Expect = 6.190e-7
Identity = 34/100 (34.00%), Postives = 56/100 (56.00%), Query Frame = 1 
Query:  622 RNVTIKECAEWMCERLGETKYYLMCRVVSTIGYNKTRALLETVQATQEAGGMPTADGSRKRTAGGVFFTLLKQHMEPAKLKELYADEIRVKKEKERARRS 921
            R       A  + + L E K  L+ R +  +G +  RA  E   ATQ  GG  TA+G RKRT GG+F+++++  ++     E++A+E   +KE+ +ARR+
Sbjct:   94 RGADASRSARELAQALDEPKVRLLARAIDALGESTCRAYAEEAVATQRNGGELTANGERKRTTGGIFWSIVRARVDKETYDEIFAEERERQKERVKARRA 193
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BLAST of mRNA_H-canaliculatus_F_contig1438.3427.1 vs. uniprot
Match: A0A0N7L5M0_PLAHL (Alpha-tubulin N-acetyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L5M0_PLAHL)

HSP 1 Score: 60.5 bits (145), Expect = 7.720e-7
Identity = 27/46 (58.70%), Postives = 36/46 (78.26%), Query Frame = -2 
Query: 2321 QEERLTPTEIAYDRPSPKLKPFLAKHFGLHNCLDQPNRFMVFTEHF 2458
            Q+ER++P ++AYDRPSP L  FL KH GL N + QPNRF++F E+F
Sbjct:  118 QKERVSPAQLAYDRPSPLLFAFLNKHAGLTNYVLQPNRFVIFNEYF 163
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BLAST of mRNA_H-canaliculatus_F_contig1438.3427.1 vs. uniprot
Match: A0A293N1Q8_ORNER (Phosphorylated adapter RNA export protein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293N1Q8_ORNER)

HSP 1 Score: 62.4 bits (150), Expect = 8.430e-7
Identity = 33/64 (51.56%), Postives = 43/64 (67.19%), Query Frame = 1 
Query:  646 AEWMCERLGETKYYLMCRVVSTIGYNKTRALLETVQATQEAGGMPTADGSRKRTAGGVFFTLLK 837
            A+ + ERL E K +L+ RVV  +G  + R LL   +  + AGG+ T DGSR+RTAGGVFF LLK
Sbjct:  131 AQEIAERLQEPKKHLLERVVRILGEARARQLLSMTEDVESAGGLLTIDGSRRRTAGGVFFHLLK 194
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BLAST of mRNA_H-canaliculatus_F_contig1438.3427.1 vs. uniprot
Match: A0A0N8CKZ4_9CRUS (Phosphorylated adapter RNA export protein n=5 Tax=Daphnia magna TaxID=35525 RepID=A0A0N8CKZ4_9CRUS)

HSP 1 Score: 63.5 bits (153), Expect = 9.280e-7
Identity = 39/99 (39.39%), Postives = 58/99 (58.59%), Query Frame = 1 
Query:  631 TIKECAEWMCERLGETKYYLMCRVVSTIGYNKTRALLETVQATQEAGGMPTADGSRKRTAGGVFFTLLKQHME--PAKLKELYADEIRVKKEKERARRS 921
            T+ E A+ +  +L E K  L+ RVV  IG   T  L    Q T+  GG+  ADGSR+RT GGVF  LL+ H E    K++E+++ E + K++ +R  R+
Sbjct:  225 TVLEVAQDITVKLHEEKMDLILRVVEIIGKELTIQLFRETQETENDGGIMVADGSRRRTPGGVFLYLLRNHEEIPMEKIREVFSQETKAKEQHKRTIRA 323
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1438.3427.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHZ0_ECTSI9.080e-8257.31Phosphorylated adapter RNA export protein n=2 Tax=... [more]
D7FHZ1_ECTSI1.670e-2069.44N-acetyltransferase domain-containing protein n=1 ... [more]
A0A835Z9U1_9STRA2.090e-858.70Alpha-tubulin N-acetyltransferase n=1 Tax=Tribonem... [more]
A9TJL2_PHYPA2.190e-838.61Phosphorylated adapter RNA export protein n=1 Tax=... [more]
A0A8J2X059_9STRA4.290e-740.00Phosphorylated adapter RNA export protein n=1 Tax=... [more]
UPI001069D6614.910e-741.67uncharacterized protein LOC114518314 n=1 Tax=Dendr... [more]
Q017X4_OSTTA6.190e-734.00Phosphorylated adapter RNA export protein n=2 Tax=... [more]
A0A0N7L5M0_PLAHL7.720e-758.70Alpha-tubulin N-acetyltransferase n=1 Tax=Plasmopa... [more]
A0A293N1Q8_ORNER8.430e-751.56Phosphorylated adapter RNA export protein (Fragmen... [more]
A0A0N8CKZ4_9CRUS9.280e-739.39Phosphorylated adapter RNA export protein n=5 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1438contigH-canaliculatus_F_contig1438:6484..12248 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score244.6
Seed ortholog evalue6.7e-62
Seed eggNOG ortholog2880.D7FHZ0
KEGG koko:K14291
KEGG Pathwayko03013,map03013
EggNOG free text desc.snRNA export from nucleus
EggNOG OGsKOG3948@1,KOG3948@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPhosphorylated adapter RNA export protein, RNA-binding domain
Ec32 orthologEc-12_006420.1
Exons3
Model size2840
Cds size1008
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1438.3427.1prot_H-canaliculatus_F_contig1438.3427.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1438 9021..10635 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929192.335332-UTR-H-canaliculatus_F_contig1438:6483..65701622929192.335332-UTR-H-canaliculatus_F_contig1438:6483..6570Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1438 6484..6570 +
1696845711.6561131-UTR-H-canaliculatus_F_contig1438:6483..65701696845711.6561131-UTR-H-canaliculatus_F_contig1438:6483..6570Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1438 6484..6570 +
1622929192.3633683-UTR-H-canaliculatus_F_contig1438:8888..90201622929192.3633683-UTR-H-canaliculatus_F_contig1438:8888..9020Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1438 8889..9020 +
1696845711.6689706-UTR-H-canaliculatus_F_contig1438:8888..90201696845711.6689706-UTR-H-canaliculatus_F_contig1438:8888..9020Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1438 8889..9020 +
1622929192.420234-UTR-H-canaliculatus_F_contig1438:10635..122481622929192.420234-UTR-H-canaliculatus_F_contig1438:10635..12248Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1438 10636..12248 +
1696845711.7047038-UTR-H-canaliculatus_F_contig1438:10635..122481696845711.7047038-UTR-H-canaliculatus_F_contig1438:10635..12248Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1438 10636..12248 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929192.3820384-CDS-H-canaliculatus_F_contig1438:9020..95631622929192.3820384-CDS-H-canaliculatus_F_contig1438:9020..9563Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1438 9021..9563 +
1696845711.682393-CDS-H-canaliculatus_F_contig1438:9020..95631696845711.682393-CDS-H-canaliculatus_F_contig1438:9020..9563Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1438 9021..9563 +
1622929192.40278-CDS-H-canaliculatus_F_contig1438:10170..106351622929192.40278-CDS-H-canaliculatus_F_contig1438:10170..10635Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1438 10171..10635 +
1696845711.6937587-CDS-H-canaliculatus_F_contig1438:10170..106351696845711.6937587-CDS-H-canaliculatus_F_contig1438:10170..10635Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1438 10171..10635 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1438.3427.1

>prot_H-canaliculatus_F_contig1438.3427.1 ID=prot_H-canaliculatus_F_contig1438.3427.1|Name=mRNA_H-canaliculatus_F_contig1438.3427.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=336bp
MASIAPPRSPSASKSAPTAAAAAANVEDWGAASQPASAENEPRGKASARP
GAHEAGQFAEGGREWGALEDGELLGMIERPLKASRGRPQQQQERQQREFD
RDNGRNGRGGGGRNGGGGTRGKGGRPKNNGRAQGRNVTIKECAEWMCERL
GETKYYLMCRVVSTIGYNKTRALLETVQATQEAGGMPTADGSRKRTAGGV
FFTLLKQHMEPAKLKELYADEIRVKKEKERARRSENKRKAAAALAGDDVM
TPRDPPRSRRRGGDNDDGAATRAGRDMGTWASPSDGFGIGDVGGGGGGGG
GDGGGTTIDAKRVLANARFSDDGQGRGASGTLLPS*
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mRNA from alignment at H-canaliculatus_F_contig1438:6484..12248+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1438.3427.1 ID=mRNA_H-canaliculatus_F_contig1438.3427.1|Name=mRNA_H-canaliculatus_F_contig1438.3427.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5765bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1438:6484..12248+ (Hapterophycus canaliculatus Oshoro5f female)
TGAGCGACATGAACGTCGCTGCTGGTGCCGTCGTCGCACTGTTGCGAGAG
GGTCCCGACGTCACCGTCCGCGCACCTCTTGGATCAGGTCGAAAGAGAGA
AGAGCCATGGCATCCACCGGTAGTCGGCGTGGTAGAGATGAACCCGGCGA
CAGTCCCTAGCGTGAGAGAAAGGGCGGCAACTGCTGTTTGAGGCGCTCTC
ATTATAATGCGTTGCAAGTAATGTCGTTGCTCTTGCCTGTCCGTTCGTCG
GCGTGGAGAGAGGAAGCACACAGCCTCCACTGAAATTTTCGTAATGCGAC
TACCGAGCTCGAAGGATGGGATATACACTTGTGGGCTTCTCAGTAGACAA
GTGTGCAACCAACCGGCAACGGTAGATTGAGACAAGGCCAAGGGGCACGT
CAGATTGCGGCTCATGAAAATCTCCCCTCACCCCGAAATATAATAAACGG
AACCCCCACCATTGGGCCCACCAAAAGCACACAGCAAGGTCGCACTAGCA
GCCACCAATCAAAGGATGCCCAGCTTTGATGATGTTGCGATGGACTTCGG
GGACGATGATGACGGGGTGAGCTTGGTAGTAATCCAAAGGTTCAGCTGCA
GCAGGATGGTCATGGTGGTCTTGTCGGCTGTCCCATTCTCCAGTTTGAAA
AATCTCGTACCGCTTACCCAAAGCTTCCATCAGATATCGCCCCCTCTGGA
CCGAGTCGTAACACTAATTCAATACCTGGATAACAGGCTTGCCTCCATCA
CCCAATGACGTGCTGTGAGAAGGCCCTCGATTATGTATACAGGCCGTCGT
ATTGGATACGATCGTTTATCCACCTTTGTATCGACATAAATTTGAAATCG
CCCATGCGGTGGTATCTCAAGCAGCCGACGGCGACCGTTCCACAACAAGA
CCTACACACAGATCCAGGGGTTCAAATTTAGGCACCACAACCTCGTGGAC
AGAGATACGAGAATCGCCATTCAGATCTATGAAGCACCATCCGTGCCCCT
CTCCTCGCCCTTACACAATGTTTGGTTCCACCTTCAGCTCGTCTACAAGA
TCCAAGTTCGTTGCCGAAGGTTCGGCTCGAGAAAAAAAAGTCACACGGAC
GCTACCCCCCCTCCCTGACCTTTGTTTTTCGAAATTTTTCATGATATTTC
ATACTTCGAGCGTACTTGTACTTGAACTTGTACTTGTTTTCTACTTTGTT
CAGGACTGTTGAAGAAATTTGATAAGGAACACTGAAAAGTATCATCTGCC
TCGCCACATTCGTAAGTTCCAGCCTCTGCTAGTTGAACTCTCTGCCCCGC
AATTCCCTCGTGTGCCGGCCACCCTCCCACACATGTCTATAGCGGTTCAG
TGACATCCAACTAGACTACTGACCAGTCAGCGCTGACTCCTCAGTAGTCA
ACTGGATTGTCTCTTACCGCTACATGTTGCTCACGAGCGCATGGTAATGG
AAGTAGCGACGATCTGTAGCCAAAGAAGCAGCATATTTACACTTTGCGGC
GCACCCAGGCCAAGTTTCTCTGACCACGGCGCGATGCGGGCGGCGAGCGG
GGCAGCGGCCGCTGTAGAAAATGCCTTTGGGCTTCCGTTAGACGAACTTG
TTGAAATGAACTCTTGGTATGTAGGGCGGCGCGTCCGCCATCTAGACGGG
CTTCATTACCAAGGATCTGTCCATATTGCAGCTAATCGCAACCGCCAACG
CCTTGGCGATAAACTAGGAGATGATAGCCTGACCATCCCCGCCCAACCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNGGG
GATTGAGGGTGTTCCTTCCCCCTCTCCTCTAACCACCCCCCCCCCCCGCC
GCCCCAAAAAAAGAGGAGGGCTCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCTCCTCCCCCATCCCCCTAAAAACTCATTA
TTCGATATTTGAGCCTACGTGTCAAGAAAATTCTCCCGGCAGACCCTTCA
TTTTTGTTCATATTTTTGTATCTTTTGCTACCAGAGACAAAAACTCATTG
TAGGCTCGCACACACTGGTTGGACAAAGATAGCTTAGCGTCGTTCTTCTC
TCTGTGCTTGTTATAGTAGCCTAGAACGTAGACTTAGGTGCATAGGTGTG
TATCGTCATCCCATTTTTCGTGGACCAGTTCGCACCTTTGAGATCTATGT
TATATCACCTGGGGTCACACAGGTGGATGGTCCACACTGGAGTTTTTTAT
TCTTTTTTCTTTCTCAACCCAACCTTGTACCTGCGGTGCTTACCTTCGTT
TCATGGCGAGAAAGGGTTCAGCATCCCCTCCCCATCGTCGACGGTGAATT
TGCAGGACGATTTTTTGACGGGCAAGCTCGCCGCTCTGGGGATTGACGAA
GATCTCGAACTTTCGGGCGGTGAGGAGGAGAACGAGGACCCTTCCCCCGC
CGCTGCCACCGTCGCCCCTACGAAGCACCCGTCCGACATGGCCTCCATTG
CACCACCGCGGTCGCCGTCCGCATCAAAAAGTGCTCCTACTGCTGCGGCC
GCTGCTGCCAATGTTGAGGACTGGGGAGCGGCATCTCAACCGGCGTCCGC
GGAAAACGAACCACGAGGGAAAGCCTCAGCTCGACCTGGCGCCCACGAAG
CCGGGCAATTCGCCGAGGGTGGGAGAGAATGGGGGGCATTAGAAGACGGA
GAGCTTTTGGGAATGATTGAGAGGCCCTTGAAGGCCTCTCGCGGACGCCC
GCAGCAGCAGCAGGAGCGACAGCAGCGGGAGTTTGATCGGGACAACGGTA
GAAATGGCCGCGGCGGCGGGGGGCGGAATGGCGGGGGTGGAACCAGAGGC
AAGGGTGGCCGACCGAAGAACAACGGCAGGGCGCAAGGACGCAACGTTAC
CATTAAGGAGTGTGCCGAATGGATGTGCGAGCGTCTTGGCGAGACTAAGT
ACTACCTCATGTGCCGAGTGGTCTCGACCATCGGTTACAACAAGACTAGG
GCCTTGCTGGAGACTGTGCAGGCGACCCAGGTGAGGAAGGACAAGGAATT
AAGGGAAACGAGTGGGAGAGGTCGAGAAGAAGTGGTACAAATTTGCTGCT
CGAACATTGCACAAGCGGACGCAAAAGCCCTGAGATCCTGCCGCGAATAG
CCTTAACTAGCAAATGTTGGCAGGGGATACTTGGCCAGCAGCGGCAACGG
GAGCAGCACGATGGCCTGATGTGGCAACTCGACGAAGGCCATATAGGTCT
AGAGACCCGTGTTGCACGCAAGTTACAGCTGTCGAACTGTGTGTGGCGGG
GGTTTTGTTGTGCGTCTCCATGCATTCGGCTCCCACGCTTTCGCTCCCGG
TATTCTGCCCGTCTCCGGCAGAACAAAAGCTGGGACATAATCAGACACTG
ACTGCCGAAAAGATGCACCTAAAACGTGAACTCGCGGACTCAAAACCGCC
TTCGCTCGCGCGCCCCCCGCGCTCTACACTACAAAACACAACACAACACT
GCACAACACAGCGCTACACAACACAGCAGCGCAACCCAGCGGCGTTCTCG
ATGCTATACACCCGCCCCCCAGCCACAGCTCCGTCCCTACCCCCCTCCCC
CCCCCGTGCACCAAATGTTCAACTTTATGATGGACAGGAGGCGGGTGGCA
TGCCAACTGCGGACGGCAGTCGGAAGCGCACCGCGGGAGGCGTTTTCTTC
ACGCTCCTCAAGCAGCACATGGAGCCGGCCAAGCTCAAAGAGCTGTACGC
AGACGAGATCCGAGTGAAGAAGGAGAAGGAGAGGGCGCGCAGATCGGAAA
ACAAGCGGAAAGCCGCGGCGGCCTTGGCCGGCGACGATGTTATGACCCCC
CGAGACCCTCCGAGGAGCAGGCGGCGCGGCGGCGATAACGACGACGGCGC
TGCCACGAGGGCCGGGAGAGATATGGGTACTTGGGCCAGTCCTTCTGATG
GGTTTGGCATCGGTGATGTCGGTGGTGGTGGTGGTGGTGGTGGTGGTGAT
GGTGGTGGTACTACGATTGATGCGAAGCGTGTGCTGGCGAACGCAAGGTT
CTCCGATGACGGGCAAGGGAGAGGTGCCTCCGGGACGCTCTTGCCGTCGT
AGTGTCTGTCGTGCCGGCGATGAAACGCGAAGCTTGGAGACAGCGAGAAG
ATAGCTTATCGCTCGCTGATCAGCTGATCCGAGTTTAAGGCTGGGGCTGA
TCCGGTGTGGCTCCCTCTCACATGCGTTTTTCGACGCGTTCCCATGATGG
TGATAATTCTACAGCACGTGCGCGTGACTGAAACATCGTGAAACGTGGGC
GGGCCCAAAGGTCGAATTATCGCGAACATCATCGTGATCCAGGGGTTCGA
TGGAGGTGCGTCCTAGGAAATATTTCGTTTGATGTTCGAGAGGAATAGGA
CTTATCACGCACAGCAGTGAAGTGCTTTGTCACGGTACATCGTCGGGGAT
CCGCCGCAATGTGAATGGTACCATGCGCGATCCGATAAACACGAGTTTGG
AATGTTTGAACGATCGCGCAAGGTTCCGCCCCGTCGCTCTTGGGCCATAG
GCGAGCTGTACGCACCGGCTGCGCGGGCTCGAAGCCCTGCGCGCCTTCTA
GACGAAACAGGTACGTTAACAACCCTCGTTTTCCATTTTCGTCTACAATG
AATTCTCTGCGACCCGCACGGGGTTCGTCCCGGCGAAAGGTAGCTCTAAC
CTACGAGGACTTCTAAAAGCTTCGCCGGGATGGGCAAGCATCATCGCAAG
GCCAAAAATCCAACCTGGCGATGACACGTCTCGGCGCTAGTTACTTTCGG
GAACGGATGCAGTGTTTCTGCGCTTCCGCCACCGTGCCGGCAGGTCCAAT
CTGGATGCAGACAGCACATCGCGGAGAAACCCGCGCGTGTAAAGGCTGAA
TTTTCAAACTCTATCAACGGCCCAGCCAATCGAAGACGAACGGCGTACAT
GTTCTGCAGATCCCGTCGTGACACGCGCCTAACGTATTGCTCAACATAAC
TGCACCACCACGAGGAATAACCCAAGTCGAGCCGAAGAAGCATGCTCCTG
AGAGTCGAATTCAGGAGCCGGCCGAATTATCGAATACGCCGGACGTTTCT
CGATTGACCTGGAGAACGAGGACGAGGTTCTCGACTGTTTACCCCGCCTG
CTGCTCCAAGCTCGCGGCGGCGGCGGCGGCGGCTGCTGCCAGTCCGAAGT
GCTCCGTGAAAACCATGAATCGGTTTGGCTGGTCCAGGCAGTTGTGGAGC
CCGAAGTGCTTGGCTAGGAAGGGTTTCAGCTTCGGGGATGGTCTATCGTA
TGCGATCTCCGTCGGTGTCAGCCTTTCCTCCTGTGATGGAAGGCGGGCCG
CGTCGAGAGTGCTTTATGTAGAGCGTGGGTTCGTCGGTGCCCGAGGCGAC
TGACCCAGCTTAGCTGCGACGCAGGCAAGGGCTTTGGGGCAAGAGAATGC
ACGTCGGAATTCAGAGGGAAGGCTAAAGGCTACTGGCGTGCCGGGGGTCG
CGCGAGCGCCGGTGCAAATGTTGGTGGTAAACTACGGCTGTGCTACAAAA
GCGGCGCGAAAGTGTCGTCCCCCGTAATTGCAGCAGCACCAAGAGGGCGG
ATCCTATCCTACCACTGTTATTGTGAATTTTTTGGTGAACCCGAAACCCG
ATCCGCTACGATATTGAGATTTTGGTCAACGATGCTACGGCATCGACGAA
TATGCTGAATTTATG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1438:6484..12248+

>mRNA_H-canaliculatus_F_contig1438.3427.1 ID=mRNA_H-canaliculatus_F_contig1438.3427.1|Name=mRNA_H-canaliculatus_F_contig1438.3427.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2016bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1438:6484..12248+ (Hapterophycus canaliculatus Oshoro5f female)
ATGGCCTCCATTGCACCACCGCGGTCGCCGTCCGCATCAAAAAGTGCTCC
TACTGCTGCGGCCGCTGCTGCCAATGTTGAGGACTGGGGAGCGGCATCTC
AACCGGCGTCCGCGGAAAACGAACCACGAGGGAAAGCCTCAGCTCGACCT
GGCGCCCACGAAGCCGGGCAATTCGCCGAGGGTGGGAGAGAATGGGGGGC
ATTAGAAGACGGAGAGCTTTTGGGAATGATTGAGAGGCCCTTGAAGGCCT
CTCGCGGACGCCCGCAGCAGCAGCAGGAGCGACAGCAGCGGGAGTTTGAT
CGGGACAACGGTAGAAATGGCCGCGGCGGCGGGGGGCGGAATGGCGGGGG
TGGAACCAGAGGCAAGGGTGGCCGACCGAAGAACAACGGCAGGGCGCAAG
GACGCAACGTTACCATTAAGGAGTGTGCCGAATGGATGTGCGAGCGTCTT
GGCGAGACTAAGTACTACCTCATGTGCCGAGTGGTCTCGACCATCGGTTA
CAACAAGACTAGGGCCTTGCTGGAGACTGTGCAGGCGACCCAGATGGCCT
CCATTGCACCACCGCGGTCGCCGTCCGCATCAAAAAGTGCTCCTACTGCT
GCGGCCGCTGCTGCCAATGTTGAGGACTGGGGAGCGGCATCTCAACCGGC
GTCCGCGGAAAACGAACCACGAGGGAAAGCCTCAGCTCGACCTGGCGCCC
ACGAAGCCGGGCAATTCGCCGAGGGTGGGAGAGAATGGGGGGCATTAGAA
GACGGAGAGCTTTTGGGAATGATTGAGAGGCCCTTGAAGGCCTCTCGCGG
ACGCCCGCAGCAGCAGCAGGAGCGACAGCAGCGGGAGTTTGATCGGGACA
ACGGTAGAAATGGCCGCGGCGGCGGGGGGCGGAATGGCGGGGGTGGAACC
AGAGGCAAGGGTGGCCGACCGAAGAACAACGGCAGGGCGCAAGGACGCAA
CGTTACCATTAAGGAGTGTGCCGAATGGATGTGCGAGCGTCTTGGCGAGA
CTAAGTACTACCTCATGTGCCGAGTGGTCTCGACCATCGGTTACAACAAG
ACTAGGGCCTTGCTGGAGACTGTGCAGGCGACCCAGGAGGCGGGTGGCAT
GCCAACTGCGGACGGCAGTCGGAAGCGCACCGCGGGAGGCGTTTTCTTCA
CGCTCCTCAAGCAGCACATGGAGCCGGCCAAGCTCAAAGAGCTGTACGCA
GACGAGATCCGAGTGAAGAAGGAGAAGGAGAGGGCGCGCAGATCGGAAAA
CAAGCGGAAAGCCGCGGCGGCCTTGGCCGGCGACGATGTTATGACCCCCC
GAGACCCTCCGAGGAGCAGGCGGCGCGGCGGCGATAACGACGACGGCGCT
GCCACGAGGGCCGGGAGAGATATGGGTACTTGGGCCAGTCCTTCTGATGG
GTTTGGCATCGGTGATGTCGGTGGTGGTGGTGGTGGTGGTGGTGGTGATG
GTGGTGGTACTACGATTGATGCGAAGCGTGTGCTGGCGAACGCAAGGTTC
TCCGATGACGGGCAAGGGAGAGGTGCCTCCGGGACGCTCTTGCCGTCGTA
GGAGGCGGGTGGCATGCCAACTGCGGACGGCAGTCGGAAGCGCACCGCGG
GAGGCGTTTTCTTCACGCTCCTCAAGCAGCACATGGAGCCGGCCAAGCTC
AAAGAGCTGTACGCAGACGAGATCCGAGTGAAGAAGGAGAAGGAGAGGGC
GCGCAGATCGGAAAACAAGCGGAAAGCCGCGGCGGCCTTGGCCGGCGACG
ATGTTATGACCCCCCGAGACCCTCCGAGGAGCAGGCGGCGCGGCGGCGAT
AACGACGACGGCGCTGCCACGAGGGCCGGGAGAGATATGGGTACTTGGGC
CAGTCCTTCTGATGGGTTTGGCATCGGTGATGTCGGTGGTGGTGGTGGTG
GTGGTGGTGGTGATGGTGGTGGTACTACGATTGATGCGAAGCGTGTGCTG
GCGAACGCAAGGTTCTCCGATGACGGGCAAGGGAGAGGTGCCTCCGGGAC
GCTCTTGCCGTCGTAG
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