mRNA_H-canaliculatus_F_contig14347.3401.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14347.3401.1 vs. uniprot
Match: D7FWP5_ECTSI (Arrestin_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWP5_ECTSI) HSP 1 Score: 555 bits (1429), Expect = 2.640e-196 Identity = 276/363 (76.03%), Postives = 313/363 (86.23%), Query Frame = 1
Query: 1 KNADGSSADELVLRLVGAAETCVMHDKTNTTHNGTSSQTYNGRERVWETKEFLSYEVKLAAFGGKAASGSHSFPFSLMLPPGLPPSMKEDGSQGGSCEISYKFKVRLHRPGMLHFDAKGKASLKVLSRPQHASSPLPVLAGPDTQTVKKCCCLKRGSMSIGFQADHSAVGLNESVGLTVVARNDSSAEVKNMHVEMNQVCTWFARGFKESKTRTIASVVVPGTQLRAAEVGNQRGQSFSAIADTARADLQEQLGSGAGTRYELLVPGDSLLTLQAETIEVKHMLSVVLKTPHCVSSPDVWTPLLVHAGTTGSAEAVPGEGSFVPHSGEAVPFATGLDAHGNVVPVAVPQSAVTMTYTSELPKY 1089
KN +GSSADELVLRL G A+T VM+D TN HN +++Q+Y RE + E KEFLSY+V+LAAFGGKAASGSHSFPF +MLPPGLPPSM+E+GSQGGSCEI Y F+ RLHRPGMLHFDAKGKA L VLS+P A + PVL GP TQTVKK CC K GSMSIGFQADHS VGLNE+VGLTVVARNDSSAEVK MHVE+ QV TWFARG+KESKTRT+A+VVVPGTQLRA+E GNQRG+S + IADTARADLQEQLG+GAGT Y+LLVPG+SLLTLQA+ IEVKH LSV+LKTPHC+SSPDVWTPLLVHAGTT + + V GEG FVPHSGEA+PFATGLD GNV PV+VPQSAVTM YT+ + K+
Sbjct: 31 KNEEGSSADELVLRLYGVAKTRVMYDTTNMAHNNSNAQSYTHREMLTEKKEFLSYDVQLAAFGGKAASGSHSFPFQVMLPPGLPPSMEENGSQGGSCEIFYGFEARLHRPGMLHFDAKGKAKLTVLSKPHEAGAATPVLVGPATQTVKKFCCFKSGSMSIGFQADHSEVGLNETVGLTVVARNDSSAEVKTMHVEIKQVSTWFARGYKESKTRTVAAVVVPGTQLRASEKGNQRGRSSAVIADTARADLQEQLGAGAGTHYDLLVPGNSLLTLQADLIEVKHTLSVMLKTPHCISSPDVWTPLLVHAGTTSAPDGVSGEGLFVPHSGEAIPFATGLDDEGNVKPVSVPQSAVTMEYTNNISKF 393
BLAST of mRNA_H-canaliculatus_F_contig14347.3401.1 vs. uniprot
Match: A0A6H5KH15_9PHAE (Arrestin_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH15_9PHAE) HSP 1 Score: 355 bits (910), Expect = 1.400e-117 Identity = 194/358 (54.19%), Postives = 239/358 (66.76%), Query Frame = 1
Query: 13 GSSADELVLRLVGAAETCVMHDKTNTTHNGTSSQTYNGRERVWETKEFLSYEVKLAAFGGKAASGSHSFPFSLMLPPGLPPSMKEDGSQGGSCEISYKFKVRLHRPGMLHFDAKGKASLKVLSRPQHASSPLPVLAGPDTQTVKKCCCLKRGSMSIGFQADHSAVGLNESVGLTVVARNDSSAEVKNMHVEMNQVCTWFARGFKESKTRTIASVVVPGTQLRAAEVGNQRGQSFSAIADTARADLQEQLGSGAGTRYELLVPGDSLLTLQAETIEVKHMLSVVLKTPHCVSSPDVWTPLLVHAGTTGSAEAVPGEGSFVPHSGEAVPFATGLDAHGNVVPVAVPQSAVTMTYTSELPK 1086
GS A LV+RLVG A+T M T + + Y R+ + E EFL Y+V+LA FGGKAASG H++ FS+ LPP LP SMKE G G SC I+Y F+ RLHRPG+L+FDAKGK LKVL +P+ S+ PV+AGP + VKKC CL+ GSMS+GFQAD S VGLNESVG+ VVARNDSS VKN+ VE+ Q +W A G + TR + SVVVPG +L AAE G QRGQS +AIADTARADL+ QL SGAGTR+EL VP D+ +TL +ETI+V+H+L+V ++ P CV PDVWT L V GT+G V E S + S A P V V VP SAV + Y E P+
Sbjct: 34 GSPAGSLVIRLVGLAKTRAMFIATGVVPTTSGAAPYTYRDMLSEDVEFLGYDVQLADFGGKAASGEHTYDFSVTLPPSLPASMKEQGGNG-SCAIAYGFRARLHRPGLLNFDAKGKVQLKVLGKPEETSASSPVVAGPAVKAVKKCYCLQSGSMSLGFQADRSVVGLNESVGVIVVARNDSSVAVKNLRVELVQETSWTANGAGDVSTRVVKSVVVPGAELGAAEFGGQRGQSAAAIADTARADLERQLASGAGTRHELTVPADTSITLNSETIQVRHVLTVRIQGPRCVECPDVWTSLHVQPGTSGVVPKVHEETSSLAPSSTARP-----------VTVTVPPSAVKLAYNHEQPR 379
BLAST of mRNA_H-canaliculatus_F_contig14347.3401.1 vs. uniprot
Match: D7FWP6_ECTSI (Arrestin_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWP6_ECTSI) HSP 1 Score: 301 bits (770), Expect = 2.100e-96 Identity = 180/387 (46.51%), Postives = 221/387 (57.11%), Query Frame = 1
Query: 13 GSSADELVLRLVGAAETCVMHDKTNTTHNGTSSQTYNGRERVWETKEFLSYEVKLAAFGGKAASGSHSFPFSLMLPPGLPPSMKEDGSQGGSCEISYKFKVRLHRPGMLHFDAKGKASLKVLSRPQHASSPLPVLAGPDTQTVKKCCCLKRGS-----------------------------MSIGFQADHSAVGLNESVGLTVVARNDSSAEVKNMHVEMNQVCTWFARGFKESKTRTIASVVVPGTQLRAAEVGNQRGQSFSAIADTARADLQEQLGSGAGTRYELLVPGDSLLTLQAETIEVKHMLSVVLKTPHCVSSPDVWTPLLVHAGTTGSAEAVPGEGSFVPHSGEAVPFATGLDAHGNVVPVAVPQSAVTMTYTSELPK 1086
GS A LV+RLVG A+T M T + + Y R+ + E EFL Y+V+LA FGG+AASG H++ FS+ LPP LP SMKE G GGSC I+Y F+ RLHRPG+L+FDAKGK LKVL +PQ S+ PV+AGP+ VKKC CL+ GS MS+GFQAD S VGLNESVG+TVVARNDSS VKN+ +E+ Q +W A G + TR + SVVVPG +L A E G QRG+S +AIADTARADL+ QL SGAGTRYEL VP D+ +TL +ETI+ GT+G V E S + S A P V V VP SAV + Y E P+
Sbjct: 34 GSPAGSLVIRLVGLAKTRAMFTATGVVPTESGAAPYTYRDTLSEDVEFLGYDVQLADFGGRAASGEHTYDFSVTLPPSLPASMKEQGG-GGSCAIAYGFRARLHRPGLLNFDAKGKVQLKVLGKPQETSASSPVVAGPEVMAVKKCYCLQSGSCVAESRSTMDLGHRHARWQHGAPTNSHESMSLGFQADRSVVGLNESVGITVVARNDSSVAVKNLRIELVQETSWTANGAGDVSTRAVKSVVVPGAELGAVEFGGQRGRSAAAIADTARADLESQLASGAGTRYELTVPADTSITLNSETIQ---------------------------PGTSGVVPKVHEETSSLAPSSTARP-----------VTVTVPPSAVKLAYNHEQPR 381
BLAST of mRNA_H-canaliculatus_F_contig14347.3401.1 vs. uniprot
Match: A0A7S4EWN0_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EWN0_CHRCT) HSP 1 Score: 127 bits (318), Expect = 1.210e-28 Identity = 103/351 (29.34%), Postives = 158/351 (45.01%), Query Frame = 1
Query: 22 ADELVLRLVGAAETCVMHDKTNTTHNGTSSQTYNGRERVWETKEFLSYEVKLAAFG---GKAASGSHSFPFSLMLPPGLPPSMKEDGSQGGSCEISYKFKVRLHRPGMLHFDAKGKASLKVLSRPQHASSPLPVLAGPDTQTVKKCCCLKRGSMSIGFQADHSAVGLNESVGLTVVARNDSSAEVKNMHVEMNQVCTWFARGFKESKTRTIASVVVPGTQLRAAEVGNQRGQSFSAIADTARA-------DLQEQLGSGAGTRYELLVPGDSLLTLQAETIEVKHMLSVVLKTPHCVSSPDVWTPLLVHAGTTGSAEAVPGEGSFVPHSGEAVPFATGLDAHGNVVPVAVP 1044
AD L + + G E +H T TTH+ + + V + G G+ G + FPFS +LP GLP +M G GG C+I Y +L RPGM++FD K V S P + +P P V C CL +G+M++G D + +G ESV + + +NDS+A V + + + W A G + R IA V + + + +Q + A+ + A A +L +QL G R L + D+ + + V+H L V L+T CV++P V T +V G AV P G+A+P AT + + +P+AVP
Sbjct: 53 ADALQVEI-GGNEKSHVHWVTTTTHSDGRXXXXXXXXXXXAYAKRALFRVVVPIHGFKEGRLLPGRYEFPFSALLPRGLPTTMYAHGG-GGDCQIKYYINAKLTRPGMMNFDLKTTRPFMVSSTPMPPEA-VPAFLQPSETKVSTCWCLGKGAMTLGATLDDTLIGRGESVRVGLALKNDSTATVDKISACVTEFVNWHAGGHSNNHKRKIAQVEFDLSSIHGVDKLDQA--ALKAVREAAAAGLSQTYEELYQQLAHGK-QRSLLSISADARDSYAGAVLSVRHQLEVRLETACCVTNPSVQT--IVRIGAPAPPPAV-----ATPVLGQALPVATPVQTY---LPIAVP 387
BLAST of mRNA_H-canaliculatus_F_contig14347.3401.1 vs. uniprot
Match: A0A7S1FHZ2_NOCSC (Hypothetical protein (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FHZ2_NOCSC) HSP 1 Score: 121 bits (303), Expect = 1.350e-26 Identity = 81/255 (31.76%), Postives = 125/255 (49.02%), Query Frame = 1
Query: 166 EVKLAAFG-GKAASGSHSFPFSLMLPPGLPPSMKEDGSQGGSCEISYKFKVRLHRPGMLHFDAKGKASLKVLSRPQHASSPLPVLAGPDTQTVKKCCCLKRGSMSIGFQADHSAVGLNESVGLTVVARNDSSAEVKNMHVEMNQVCTWFARGFKESKTRTIASV-VVPGTQLRAAEVGNQR---GQSFSAIADTARADLQEQLGSGAGTRYELLVPGDSLLTLQAETIEVKHMLSVVLKTPHCVSSPDVWTPLLV 915
+V LA+F G G + +PFS +LPPGLP S+ GG C I Y RLHRPGM +D K V ++ S P+ A P+T V CCCL RGSM++G D + +G +++G+ + +N+S+A V + V++++V W A G R +A + T AEV + G+ +A +L L +G R L V + T + V H + + L T CV++P + P+ +
Sbjct: 115 DVPLASFSSGAVEPGRYEYPFSTVLPPGLP-SVMCASQGGGDCRIHYSLTARLHRPGMFKWDVTSKVPFAVQAQALPPSKQ-PLYAQPETALVNLCCCLGRGSMTLGAVVDETFLGRGQTLGVGIAVKNESAARVHGLFVKISEVVRWTAGGHGHRLERVLAQADLAIETMEGLAEVSKEARKGGRQDAASRYRTYEELYATL-TGGRQRVSLRVSPAARDTYVGSVLSVSHRIQLELVTSFCVTNPILQVPVRI 366
BLAST of mRNA_H-canaliculatus_F_contig14347.3401.1 vs. uniprot
Match: A0A0G4G636_VITBC (Arrestin_C domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G636_VITBC) HSP 1 Score: 69.3 bits (168), Expect = 2.760e-9 Identity = 51/187 (27.27%), Postives = 76/187 (40.64%), Query Frame = 1
Query: 37 LRLVGAAETCVMHDKTNTTHNGTSSQTYNGRERVWETKEFLSYEVKLAAFGGKAASGSHSFPFSLMLPPGLPPSMKEDGSQGG---SCEISYKFKVRLHRPGMLHFDAKGKASLKVLSRPQHASSPLPVLAGPDTQTVKKCCCLKRGSMSIGFQADHSAVGLNESVGLTVVARNDSSAEVKNMHVEM 588
L++ G V T T G +++ +F EV +A G +S+PF MLP LP S + G +CEI YK K ++ RPGM D K L V R P L G D Q + CCC+ +G M++ + + + L N S A + + +E+
Sbjct: 41 LKVSGFERVTVWETYTVTEGTGDNAKQVQKTRTHTNRNDFFKVEVPVAQGLSHLDRGQYSYPFRFMLPSTLPGSFELSDRVHGDRYNCEIVYKVKGKVVRPGMFKADLKDTKKLTVYQR----MPPSVELVGHDHQMMYLCCCIAKGEMNLTMRCNADKYMPGDMAQLLCSIDNQSEANIPKIRLEL 223
BLAST of mRNA_H-canaliculatus_F_contig14347.3401.1 vs. uniprot
Match: A0A7S3RIZ2_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RIZ2_9SPIT) HSP 1 Score: 68.2 bits (165), Expect = 5.680e-9 Identity = 37/164 (22.56%), Postives = 78/164 (47.56%), Query Frame = 1
Query: 439 VKKCCCLKRGSMSIGFQADHSAVGLNESVGLTVVARNDSSAEVKNMHVEMNQVCTWFARGFKESKTRTIASVVVPGTQLRAAEVGNQRGQSFSAIADTARADLQ-----EQLGSGAGTRYELLVPGDSLLTLQAETIEVKHMLSVVLKTPHCVSSPDVWTPLLV 915
V CCC+ +G +++ D + +G E++ + V N+SS+ + M+ ++ + +W A G ++RTIA + +G + AI + + ++ + R L + T Q + V+H+++V +KTP+CV+ P++ P+ +
Sbjct: 2 VNMCCCIPQGQLTLAASIDDTCMGRGEALDIAVAVNNESSSIPERMYADVREYVSWHAGGHSNHQSRTIAYAEYNPADVEG--LGRKSKHELRAIKENPGSRMEMLALMHRSLQNREARQPLRCNPTARDTYQGRVLSVRHVMAVRVKTPYCVTDPELALPIRI 163
BLAST of mRNA_H-canaliculatus_F_contig14347.3401.1 vs. uniprot
Match: A0A6P8HT67_ACTTE (arrestin domain-containing protein A-like isoform X1 n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HT67_ACTTE) HSP 1 Score: 63.5 bits (153), Expect = 1.680e-7 Identity = 52/192 (27.08%), Postives = 83/192 (43.23%), Query Frame = 1
Query: 166 EVKLAAFGGKAASGSHSFPFSLMLPPGLPPSMKEDGSQGG-----SCEISYKFKVRLHRPGMLHFDAKGKASLKVLSRPQHASSPLPVLAGP---DTQTVKKCCCLKRGSMSIGFQADHSAVGLNESVGLTVVARNDSSAEVKNMHVEMNQVCTWFAR------GFKESKTRT--IASVVVPGTQLRAAEVG 693
E +L + G G +++PF L LP + K++G Q S EI Y + G GK +V + + PL + G D +TVK CCC+ RG +S+ + D A E L + +N+S ++ M+V++ +V T R G +E T T + S +P L + G
Sbjct: 79 EFRLIEYEGGIPMGFYAYPFHFSLQQELPATFKDNGVQADNTSKWSAEIQYSVTAEVEMSG------SGKVLQEVQPIIINKNLPLSDIQGDPVSDKKTVKICCCIPRGDVSLIARLDKKAYTSGEDAKLILETKNNSGVDIDAMNVKVMRVVTLSPRDKCDSSGSQEENTSTTLVKSPFIPNIMLTVTQEG 264
BLAST of mRNA_H-canaliculatus_F_contig14347.3401.1 vs. uniprot
Match: R1EL60_EMIHU (Arrestin_N domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EL60_EMIHU) HSP 1 Score: 57.4 bits (137), Expect = 2.040e-6 Identity = 40/96 (41.67%), Postives = 51/96 (53.12%), Query Frame = 1
Query: 31 LVLRLVGAAETCVMHDKTNTTH-NGTSSQTYNGRERVWETKEFLSYEVKLAAF-GGKAASGSHSFPFSLMLPPGLPPSMKEDGSQGGSCEISYKFK 312
L L + GA E +H T TH +G + +T + + L V LA+F G GS+ FPFSL+LP GLP SM G GGSC+ISY K
Sbjct: 40 LQLEVFGA-EFSHVHWTTQETHGSGENRKTVTKHHHAYARRHLLRVVVTLASFPNGSLPPGSYEFPFSLVLPSGLPSSMYAAGG-GGSCKISYSVK 133 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14347.3401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14347.3401.1 >prot_H-canaliculatus_F_contig14347.3401.1 ID=prot_H-canaliculatus_F_contig14347.3401.1|Name=mRNA_H-canaliculatus_F_contig14347.3401.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=364bp KNADGSSADELVLRLVGAAETCVMHDKTNTTHNGTSSQTYNGRERVWETKback to top mRNA from alignment at H-canaliculatus_F_contig14347:737..2632- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14347.3401.1 ID=mRNA_H-canaliculatus_F_contig14347.3401.1|Name=mRNA_H-canaliculatus_F_contig14347.3401.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1896bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14347:737..2632- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14347:737..2632- >mRNA_H-canaliculatus_F_contig14347.3401.1 ID=mRNA_H-canaliculatus_F_contig14347.3401.1|Name=mRNA_H-canaliculatus_F_contig14347.3401.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2184bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14347:737..2632- (Hapterophycus canaliculatus Oshoro5f female)back to top |