mRNA_H-canaliculatus_F_contig1434.3394.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1434.3394.1 vs. uniprot
Match: A0A6H5KT89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT89_9PHAE) HSP 1 Score: 589 bits (1519), Expect = 7.040e-202 Identity = 357/498 (71.69%), Postives = 396/498 (79.52%), Query Frame = 1
Query: 52 RRRPSVSDVRCLSAAFMILAVANQAEGFFCTNGQVGGRVSGCTAISNARQVSASSWLPRPISTSSGRS-SGNVLKASIMEPRDKEASGGDKKVDITLESATEASPAAPAAVPPVEAKKGVEGGGEEDMVVAPATPAAESRTVQLSKRVEAEGEMANSRAKRMADLSSDLKKSFARKEEVERMVADEVAQLGMKLRQERDIEIARAEDLKELLVEFEETIVEKQAEIEKEQDLLAQMQA--LRGQVEEASIRAPIEAAMAKKADVTSIEVMLLEDLVECKEKLTEELKSTSSRGETMNGVVAALPAEGDIERLRNYNWQDVQDLQEVLLSSVESMEASDAQVGALRTRLLDSVVQKREVLGEASKTELVQSDGGATR---KMTTAVALQVSADLSEQELLDSVAESSKNTALGVVKSVSAGADSLGSYIRSPAGQDVAASTVLVIGALAGAASSVGNAFKAAKKEFDDNAIKSEEMTSFDKIFNSLQSSVKAVQKSPTV 1527
R R S+ +RCLSAA M+LAVA+QA+GF+C GQ+GGR S C+A+S++R+ S+S+W RP + S GRS SG VL+AS EPRDK+A GDK E KKG EGGG ED +A TPA ESRT LSKRV EG+ AN RAKRMA+LSS LK+SFA+KEEVE M+ +EVAQLG KLRQERDIEIAR DLKELL EF+ETIVEKQAEIEKEQDLLAQMQA LRGQV+EASIRAPIE AMAKKADVTSIEVMLLEDLVECKEKL EELKSTS+R ETMNGVVAALPAEGDI RLR YNWQDVQDLQEVL+SS ESMEASDAQVG LRTRLLDSV QK+EVLGE SK ELV G R KMTTA A Q S +LSE+ELL +V ESSKNTALGV KSVSAG SLG Y+RSPAGQDVAASTVLVIGALAGAA+SV NAFKAAKKEFD+NA+ EE+TSFDKI SLQSS+KAVQ+SP V
Sbjct: 8 RERLSLGAMRCLSAAIMLLAVADQADGFYCAPGQIGGRASRCSAVSSSRKASSSTWSTRPTTPSQGRSRSGYVLQASSTEPRDKDAPEGDKVG--------------------AEKKKGGEGGGAEDAALA--TPA-ESRTALLSKRVAEEGKTANQRAKRMANLSSQLKRSFAKKEEVETMITEEVAQLGTKLRQERDIEIARGADLKELLKEFDETIVEKQAEIEKEQDLLAQMQASALRGQVDEASIRAPIETAMAKKADVTSIEVMLLEDLVECKEKLEEELKSTSARAETMNGVVAALPAEGDIARLRAYNWQDVQDLQEVLVSSAESMEASDAQVGLLRTRLLDSVQQKKEVLGEVSKAELVAGGGRGGRGAKKMTTARAFQASTELSEEELLQAVTESSKNTALGVAKSVSAGTSSLGDYLRSPAGQDVAASTVLVIGALAGAAASVANAFKAAKKEFDENAVSGEELTSFDKILKSLQSSLKAVQESPAV 482
BLAST of mRNA_H-canaliculatus_F_contig1434.3394.1 vs. uniprot
Match: D7FTP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTP6_ECTSI) HSP 1 Score: 372 bits (955), Expect = 6.780e-120 Identity = 211/258 (81.78%), Postives = 227/258 (87.98%), Query Frame = 1
Query: 754 MQALRGQVEEASIRAPIEAAMAKKADVTSIEVMLLEDLVECKEKLTEELKSTSSRGETMNGVVAALPAEGDIERLRNYNWQDVQDLQEVLLSSVESMEASDAQVGALRTRLLDSVVQKREVLGEASKTELVQSDGGATRKMTTAVALQVSADLSEQELLDSVAESSKNTALGVVKSVSAGADSLGSYIRSPAGQDVAASTVLVIGALAGAASSVGNAFKAAKKEFDDNAIKSEEMTSFDKIFNSLQSSVKAVQKSPTV 1527
MQALRGQV+EASIRAPIE AMAKKADVTSIEVMLLEDLVECKEKL EELKSTS+RG+TMNGVVAALPAEGDI RLR YNWQDVQDLQ VL+SS ESMEASDAQVG LRT+L+DSV QK+EVLGE SK ELV+ G RKMTTA A Q S +LSE+ELL +V ESSKNTALGV KSVSAG SLG Y+RSPAGQDVAASTVLVIGALAGAASSV NAFKAAKKEFD+NAI EE+TSFDKI SLQSS+KAVQ+SP V
Sbjct: 1 MQALRGQVDEASIRAPIETAMAKKADVTSIEVMLLEDLVECKEKLEEELKSTSARGDTMNGVVAALPAEGDIARLRAYNWQDVQDLQGVLVSSAESMEASDAQVGLLRTQLMDSVQQKKEVLGEVSKAELVEGGGRGARKMTTARAFQASTELSEEELLQAVTESSKNTALGVAKSVSAGTSSLGDYLRSPAGQDVAASTVLVIGALAGAASSVANAFKAAKKEFDENAISGEELTSFDKILKSLQSSLKAVQESPAV 258
BLAST of mRNA_H-canaliculatus_F_contig1434.3394.1 vs. uniprot
Match: A0A835Z020_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z020_9STRA) HSP 1 Score: 184 bits (466), Expect = 1.190e-49 Identity = 120/269 (44.61%), Postives = 172/269 (63.94%), Query Frame = 1
Query: 754 MQALRGQVEEASIRAPIEAAMAKKADVTSIEVMLLEDLVECKEKLTEELKSTSSRGETMNGVVAALPAEGDIERLRNYNWQDVQDLQEVLLSSVESMEASDAQVGALRTRLLDSVVQKREVLGE----ASKTELVQSDG-GATRKMTTAVALQVSADLS------EQELLDSVAESSKNTALGVVKSVSAGADSLGSYIRSPAGQDVAASTVLVIGALAGAASSVGNAFKAAKKEFDDNAIKSEEMTSFDKIFNSLQSSVKAVQKSPTV 1527
MQ ++ QV+E +IRA +AAMAKKAD+ SIEV+LLED+ +C+E+L EL ST +R + ++GVVAALP D R R Y+W+D+Q LQ++LL SV+SM SD +V ALRT+ D+V QKREVLGE ++ E+V G G + AL+ DLS + EL + +SSK+ A+ + K+V+ GA SLG Y++SP Q +AA+ V + G ++G +F A K F N + EE+TSFD +F + + +VK+VQ S V
Sbjct: 1 MQLVKAQVKEDAIRAQFQAAMAKKADLISIEVILLEDMSDCREQLVAELASTVTRVDRIDGVVAALPRSDDRSRARLYDWEDIQSLQDLLLESVQSMLDSDTKVAALRTKFEDAVRQKREVLGEIPAPSTVIEVVPEGGSGGEGAAQGSAALRPRVDLSSVSALSKDELSAAAGKSSKDAAVALGKTVAVGAQSLGDYLKSPKAQSLAATVVDLFQNTGGYFKAIGESFSVATKVFQQNTLPGEEITSFDTMFKTARDAVKSVQTSEEV 269
BLAST of mRNA_H-canaliculatus_F_contig1434.3394.1 vs. uniprot
Match: A0A6V1Q3J9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1Q3J9_HETAK) HSP 1 Score: 129 bits (323), Expect = 2.700e-28 Identity = 105/356 (29.49%), Postives = 183/356 (51.40%), Query Frame = 1
Query: 517 SRAKRMADLSSDLKKSFARKEEVERMVADEVAQLGMKLRQERDIEIARAEDLKELLVEFEETIVEKQAEIEKEQDLLAQMQALRGQVEEASIRAPIEAAMAKKADVTSIEVMLLEDLVECKEKLTEELKSTSSRGETMNGVVAALPAEGDIERLRNYNWQDVQDLQEVLLSSVESMEASDAQVGALRTRLLDSVVQKREVLGEA------------SKTELVQSDGGATRKMTTAVALQVSADLSEQELLDSVAESSKNTALGVVKSVSAGADSLGS-------YIRSPAGQDVAASTVLVIGALAGAASSVGNAFKAAKKEFDDNAIKSEEMTSFDKIFNSLQSSVKAVQKSPTV 1527
SR R+ D+ S L KS K+E E +A E+ +L +KL E + E ++K L+ + EE ++ QV+E I I+AA KAD+ +IE +++EDL +C ++ EEL T SR +TM V+ LPA DI+ R Y+W +V +L ++L+++ ++++ DA++GAL+ + ++ QK +LGE + + GG V++Q+S+D++EQ++L +SS +K++ G+ +LG + +S GQ + + I A ++ A KKE++ K EEMT+FDK+F+ +Q + A+++S V
Sbjct: 120 SRKTRIEDVKSQLSKSINLKKEAENAIAKEIGELKVKLDGELEEEKGLEIEIKMLISQLEENXXXXXXXXXXXXXXXXXXXXVKTQVKEEQIFKQIDAASNVKADLIAIESVVIEDLEDCLSQMREELIDTESRIKTMTVAVSQLPAADDIDTARQYSWGEVSELNDLLVAAFDNLQKRDARIGALKQKFREATQQKALILGEVDVLGGGAGDGAKAAAAVAGGAGGKVGSPKKVVSVQISSDMTEQDILALAGDSS-------MKALGEGSRALGQVGTKLNYWAKSEDGQQSVSELIDAIEASKKVLPALQRAAAQVKKEWETE-FKGEEMTTFDKLFDGIQRGIDAIKESTEV 467
BLAST of mRNA_H-canaliculatus_F_contig1434.3394.1 vs. uniprot
Match: A0A6U1MNE3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MNE3_9STRA) HSP 1 Score: 127 bits (318), Expect = 5.390e-28 Identity = 95/354 (26.84%), Postives = 199/354 (56.21%), Query Frame = 1
Query: 520 RAKRMADLSSDLKKSFARKEEVERMVADEVAQLGMKLRQERDIEIARAEDLKELLVEFEETIVEKQAEIEKEQDLLAQMQALRGQVEEASIRAPIEAAMAKKADVTSIEVMLLEDLVECKEKLTEELKSTSSRGETMNGVVAALPAEG-DIERL-RNYNWQDVQDLQEVLLSSVESMEASDAQVGALRTRLLDSVVQKREVL---------GEAS------KTELVQSDGGATRKMTTA-VALQVSADLSEQELLDSVAESSKNTALGVVKSVSAGADSLGSYIRSPAGQDVAASTVLVIGALAGAASSVGNAFKAAKKEFDDNAIKSEEMTSFDKIFNSLQSSVKAVQKSPTV 1527
R +R+ +S L KS +K+++E +A EV + ++ ++ +E +K LL + + + K+A+++KE++LL M+ ++ ++E+A++R +E A++ KA++ +IE+++ ++L C +L ++ T R + M + +LP +G D++ L R Y+W++VQ+LQE+LL S+E+ + + ++ ++ + +++ Q++ VL G A+ + Q G M A V L ++ D++E ++L+ +S + A ++V A S G +++S GQD A + V + + G +SV + + F++N++K ++MT+F I NS ++ ++ KS V
Sbjct: 39 RMRRIDGMSQSLGKSLMKKQQIEETLAVEVEGIRQEMAYMLKEDLRDSEQMKVLLADLDLALTSKKAQVKKEENLLLNMEEVKERIEDAALRELMECAISAKANLVAIEMVVAQELETCIVQLRANIQDTRERCDLMKVALDSLPGQGQDLQALARQYSWEEVQELQELLLDSIEACQERNFKINNIKLKFAEALRQRQSVLEGVELLNAGGRAALYPSKEQQRRAQQVGAMAEVMKAASVKLTITRDMTEVDMLNVAKDSLVDFATNSTQAVGAIVISTGQWVQSEQGQDAAGAVVNAVTGVTGFFASVKDVVVTVVETFNNNSVKGDDMTNFKIIANSFINATASIPKSKEV 392
BLAST of mRNA_H-canaliculatus_F_contig1434.3394.1 vs. uniprot
Match: A0A7S1Z4U1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z4U1_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 1.600e-8 Identity = 45/177 (25.42%), Postives = 94/177 (53.11%), Query Frame = 1
Query: 595 VADEVAQLGMKLRQERDIEIARAEDLKELLVEFEETIVEKQAEIEKEQDLLAQMQALRGQVEEASIRAPIEAAMAKKADVTSIEVMLLEDLVECKEKLTEELKSTSSRGETMNGVVAALPAEGDIERLRNYNWQDVQDLQEVLLSSVESMEASDAQVGALRTRLLDSVVQKREVLGE 1125
+ +EV + LR E R +ELL + TI K+++++ E + A+M ++R +++ ++ ++A + ++ TSIE L++DL C +++ L ++ M V+ + + NY W DV ++++VL + ++ ASD +V L+ +L ++V+K ++L E
Sbjct: 4 IVEEVESVSDLLRYSIGEEEQRENQFQELLDNLQFTISSKESDMKSEASITAEMASVRSKIKAGTVATQLDALLKQRLQYTSIERDLVQDLYSCVKEMESLLVNSQEMSGKMKDVLERIVHPDITKADENYEWSDVDEMEDVLDKAAANVAASDERVMTLKAKLDRALVKKSQLLQE 180 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1434.3394.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1434.3394.1 >prot_H-canaliculatus_F_contig1434.3394.1 ID=prot_H-canaliculatus_F_contig1434.3394.1|Name=mRNA_H-canaliculatus_F_contig1434.3394.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=509bp LSLRTLLSSSLLNMAMYRRRPSVSDVRCLSAAFMILAVANQAEGFFCTNGback to top mRNA from alignment at H-canaliculatus_F_contig1434:166..9216- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1434.3394.1 ID=mRNA_H-canaliculatus_F_contig1434.3394.1|Name=mRNA_H-canaliculatus_F_contig1434.3394.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=9051bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1434:166..9216- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1434:166..9216- >mRNA_H-canaliculatus_F_contig1434.3394.1 ID=mRNA_H-canaliculatus_F_contig1434.3394.1|Name=mRNA_H-canaliculatus_F_contig1434.3394.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3054bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1434:166..9216- (Hapterophycus canaliculatus Oshoro5f female)back to top |