mRNA_H-canaliculatus_F_contig14308.3377.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14308.3377.1 vs. uniprot
Match: D7G2H0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2H0_ECTSI) HSP 1 Score: 309 bits (791), Expect = 1.740e-103 Identity = 147/201 (73.13%), Postives = 165/201 (82.09%), Query Frame = 1
Query: 1 VAICWFVTNRAEGSIFALINSPIAKQVILVLSECFRANAMCGAVVLANATLKPGKHYPIALWGPIIMGTLAGCGGLFLPLDKGLKASKPSSCCFARIGLQKGAPWPFQSAFYGSAFFNLFVYDPNVGPFLRDAASHFLAGDLVVQGKAIVAGFFCACAIAQTILGPAFNPFTPVHTAVYTITGVPNPRAAADPAADKPKED 603
VA+CWFV+NRAEG IFALIN+PI KQVILVLSE FRAN+MCG VVL+N+ LKPGKHYPIALWGPI++GT+ GCGGLFLPLDKGLK GL+ GAPWP QSAFYGS FFNLFVYDPNVGP+LRDAA+ FL GDLVVQG+AIVAGF C A+AQT++ PAFNPFTPVH VYT+TGVPNP A A +KPK D
Sbjct: 110 VAVCWFVSNRAEGPIFALINTPIMKQVILVLSEVFRANSMCGIVVLSNSILKPGKHYPIALWGPILLGTVGGCGGLFLPLDKGLK------------GLKNGAPWPLQSAFYGSMFFNLFVYDPNVGPYLRDAAALFLDGDLVVQGRAIVAGFLCVVALAQTLISPAFNPFTPVHNVVYTVTGVPNPEAVAVATGEKPKAD 298
BLAST of mRNA_H-canaliculatus_F_contig14308.3377.1 vs. uniprot
Match: A0A835Z0I7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0I7_9STRA) HSP 1 Score: 164 bits (416), Expect = 6.880e-47 Identity = 83/191 (43.46%), Postives = 108/191 (56.54%), Query Frame = 1
Query: 13 WFVTNRAEGSIFALINSPIAKQVILVLSECFRANAMCGAVVLANATLKPGKHYPIALWGPIIMGTLAGCGGLFLPLDKGLKASKPSSCCFARIGLQKGAPWPFQSAFYGSAFFNLFVYDPNVGPFLRDAASHFLAGDLVVQGKAIVAGFFCACAIAQTILGPAFNPFTPVHTAVYTITGVPNPRAAADPAA 585
W V NR E + AL+ +P+ Q + ++E FRAN C V +A + GK+YPI WGP+++GT+AGC G+FLP DKGL + K G+PWP QSAFYGS F+L +DP+V L A + A +A V FF A A QT GP FNPF+P+H Y I+GV P A PAA
Sbjct: 89 WLVVNRLEEPVGALLRAPVISQALAFMAEVFRANGFCRMVQVAFKEIPAGKYYPIPFWGPVLLGTIAGCAGMFLPFDKGLASIKG------------GSPWPLQSAFYGSLAFHLLAHDPHVRAALAPYAGDYTAD----AARACVVAFFAAVATLQTYAGPHFNPFSPLHRVAYAISGVKAPGANGAPAA 263
BLAST of mRNA_H-canaliculatus_F_contig14308.3377.1 vs. uniprot
Match: A0A4D9CX56_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CX56_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.030e-20 Identity = 58/186 (31.18%), Postives = 96/186 (51.61%), Query Frame = 1
Query: 1 VAICWFVTNRAEGSIFALINSPIAKQVILVLSECFRANAMCGAVVLANATLKPGKHYPIALWGPIIMGTLAGCGGLFLPLDKGLKASKPSSCCFARIGLQKGAPWPFQSAFYGSAFFNLFVYDPNV-GPFLRDAASHFLAGDLVVQGKAIVAGFFCACAIAQTILGPAFNPFTPVHTAVYTITGVP 555
V + W++ + + L+ + K +++ L E +RA ++ V A + PG +YPIA+ GP+++GTL+G G F+P D+G+ L G P Q+ F++L +DP + G +LR + L+ + KA+ FF A A + GP +NPFTPVHT +Y + G+P
Sbjct: 91 VCLSWYLVHYTR--VGGLLQTSPCKFLLVALFEIYRAASILKTVGQAATDIAPGPYYPIAVVGPVLVGTLSGSMGAFMPPDRGISF------------LATGVPLNLQTTLLACLFYHLAAHDPALPGAYLRGLPALRLSDPENL--KALTVFFFVAMAFLSLVKGPDYNPFTPVHTLLYQVLGIP 260
BLAST of mRNA_H-canaliculatus_F_contig14308.3377.1 vs. uniprot
Match: D7FML9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FML9_ECTSI) HSP 1 Score: 95.5 bits (236), Expect = 1.300e-19 Identity = 62/190 (32.63%), Postives = 87/190 (45.79%), Query Frame = 1
Query: 55 INSPIAKQVILVLSECFRANAMCGAVVLANATLKPGKHYPIALWGPIIMGTLAGCGGLFLPLDKGLKASKPSSCCFARIGLQKGAPWPFQSAFYGSAFFNLFVYDPNV-GPFLRDAASHFLAGDLVVQGKAIVAGFFCACAIAQTILGPAFNPFTPVHTAVYTITGVPN-------PRAAADPAADKPKE 600
I +P + + +LS R N +C V A P +YPIAL+GPI++G G GG +P DKGL + + K PW Q F + F+++ D + G +R A L + I F + QT P FNPFTP H A+YT+TG+P PR+ ADK K+
Sbjct: 35 IKTPHLWKAMALLSTTSRMNKICFIVDYALTKFPPSPYYPIALFGPIMIGLARGIGGSLVPADKGLSS------------ISKDLPWAVQLCFSVATFYHVVANDTYILGGMVRGALG--LENATREDIRLIAVTFGVVVTVIQTYYAPKFNPFTPAHQALYTVTGMPKTAITIEVPRSTPSTDADKAKD 210
BLAST of mRNA_H-canaliculatus_F_contig14308.3377.1 vs. uniprot
Match: A0A6H5JUV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV5_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 4.200e-17 Identity = 62/212 (29.25%), Postives = 93/212 (43.87%), Query Frame = 1
Query: 1 VAICWFVTNRAEGSIFALINSPIAKQVILVLSECFRANAMCGAVVLANATLKPGKHYPIALWGPIIMGTLAGCGGLFLPLDKGLKASKPSSCCFARIGLQKGAPWPFQSAFYGSAFFNLFVYDPNV-GPFLRDAASHFLAGDLVVQGKAIVAGFFCACAIAQTILGPAFNPFTPVHTA----VYTITGVPN-------PRAAADPAADKPKE 600
+ + + V+ + + I +P + + +LS R N +C V A P +YPIAL+GPI++G G GG +P DKGL + + K PW Q F + F+++ D + G +R A L + I F + QT P FNPFTP H A +Y +TG+P PR+ ADK K+
Sbjct: 85 IMVFFLVSVVFDPYVVNFIKTPHLWKAMALLSTTSRMNKICFIVDYALTKFPPSPYYPIALFGPIMIGLARGIGGSLVPADKGLSS------------ISKDLPWAVQLCFSVATFYHIVANDTYILGGMVRGALG--LENATREDIRLIAVTFGVVVTVIQTYYAPKFNPFTPAHQATSPALYAVTGMPKTAITIEVPRSTPSTDADKAKD 282
BLAST of mRNA_H-canaliculatus_F_contig14308.3377.1 vs. uniprot
Match: A0A1E7EP48_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EP48_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 1.480e-10 Identity = 50/139 (35.97%), Postives = 68/139 (48.92%), Query Frame = 1
Query: 61 SPIAKQVILVLSECFRANAMCGAVVLANATLKPGKHYPIALWGPIIMGTLAGCGGLFLPLDKGLKASKPSSCCFARIGLQKGAPWPFQSAFYGSAFFNLFVYDPNVG-----PFLRDAASHFLAGDLVVQGKAIVAGFF 462
S I +++V E R + V LA +T+ P + + ++GPII GT+ GCGG FLP DKGL K G P P +AF G+ FF+LF + G PF+ D L D +GK IVA +F
Sbjct: 132 SAITNALMVVFYETIRTYVVTLFVGLAASTIAPSQ-FSFPVFGPIICGTIGGCGGAFLPFDKGLAPIKD------------GLPPPVFTAFTGATFFHLFTHYTKNGNDTGIPFVDDVLDQ-LQIDAPKKGKVIVALWF 256
BLAST of mRNA_H-canaliculatus_F_contig14308.3377.1 vs. uniprot
Match: B5Y4T6_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y4T6_PHATC) HSP 1 Score: 65.9 bits (159), Expect = 1.740e-9 Identity = 38/101 (37.62%), Postives = 53/101 (52.48%), Query Frame = 1
Query: 61 SPIAKQVILVLSECFRANAMCGAVVLANATLKPGKHYPIALWGPIIMGTLAGCGGLFLPLDKGLKASKPSSCCFARIGLQKGAPWPFQSAFYGSAFFNLFV 363
SPI K ++ + E RA+ + + A A + P + I L+GPI G +AGCGG FLPL+KGL K + G P SAF G+ F++LF
Sbjct: 118 SPILKVAVIFMYETLRASVVV-KLTTAAAKVIPASDFAIPLFGPIFCGAIAGCGGSFLPLNKGLDPIKAN-----------GLGQPMLSAFIGATFYHLFT 206
BLAST of mRNA_H-canaliculatus_F_contig14308.3377.1 vs. uniprot
Match: A0A7S1BM49_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BM49_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.910e-9 Identity = 48/148 (32.43%), Postives = 73/148 (49.32%), Query Frame = 1
Query: 52 LINSPIAKQVIL-VLSECFRANAMCGAVVLANATLKPGKHYPIALWGPIIMGTLAGCGGLFLPLDKGLKASKPSSCCFARIGLQKGAPWPFQSAFYGSAFFNLFVYDPNVGPFLRDAASHFLAGDLVVQGKAIVAGFFCACAIAQTIL 492
L + IA Q+IL VL E RA +C A T+ P L+GPI+ GT++GCGG F+PL KGL+ ++ G P P ++A G+A ++LFV L D D +G+ +VA FF + ++ ++
Sbjct: 132 LFSKNIALQLILIVLYETTRAGVVCKFTKKAGETIL-ASWLPYPLFGPIMCGTVSGCGGAFMPLSKGLEPTRA------------GMPKPAKTALIGAAAYHLFVNTK-----LTDGVI-----DAPQKGQVLVASFFISVSLVDLLM 256
BLAST of mRNA_H-canaliculatus_F_contig14308.3377.1 vs. uniprot
Match: A0A448Z417_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z417_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.940e-9 Identity = 40/101 (39.60%), Postives = 52/101 (51.49%), Query Frame = 1
Query: 61 SPIAKQVILVLSECFRANAMCGAVVLANATLKPGKHYPIALWGPIIMGTLAGCGGLFLPLDKGLKASKPSSCCFARIGLQKGAPWPFQSAFYGSAFFNLFV 363
S I K V+++ E RA + LA +T+ + ++GPII GT+ GCGG FLPLDKGL L G P P SAF G+ FF+LF
Sbjct: 126 SGIFKAVVILFYESIRAYVVTLFTGLAASTIA-ASQFSFPVFGPIICGTIGGCGGAFLPLDKGLAP------------LHDGLPAPVFSAFVGATFFHLFT 213
BLAST of mRNA_H-canaliculatus_F_contig14308.3377.1 vs. uniprot
Match: A0A7S1VWR2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1VWR2_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 7.510e-9 Identity = 35/101 (34.65%), Postives = 53/101 (52.48%), Query Frame = 1
Query: 61 SPIAKQVILVLSECFRANAMCGAVVLANATLKPGKHYPIALWGPIIMGTLAGCGGLFLPLDKGLKASKPSSCCFARIGLQKGAPWPFQSAFYGSAFFNLFV 363
SP+ K +++V E RA + + A+A + P + L+GPI+ GT+AGCGG FLP++KGL + G P SAF G+ +LF+
Sbjct: 118 SPVVKSLVVVFYELIRAKVVLTFTLAASAAIAP-TTFSFPLFGPIMCGTVAGCGGAFLPMNKGLDP------------ITSGLQPPMSSAFVGATLVHLFL 205 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14308.3377.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14308.3377.1 >prot_H-canaliculatus_F_contig14308.3377.1 ID=prot_H-canaliculatus_F_contig14308.3377.1|Name=mRNA_H-canaliculatus_F_contig14308.3377.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=202bp VAICWFVTNRAEGSIFALINSPIAKQVILVLSECFRANAMCGAVVLANATback to top mRNA from alignment at H-canaliculatus_F_contig14308:290..2587- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14308.3377.1 ID=mRNA_H-canaliculatus_F_contig14308.3377.1|Name=mRNA_H-canaliculatus_F_contig14308.3377.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2298bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14308:290..2587- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14308:290..2587- >mRNA_H-canaliculatus_F_contig14308.3377.1 ID=mRNA_H-canaliculatus_F_contig14308.3377.1|Name=mRNA_H-canaliculatus_F_contig14308.3377.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1212bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14308:290..2587- (Hapterophycus canaliculatus Oshoro5f female)back to top |