mRNA_H-canaliculatus_F_contig14229.3325.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14229.3325.1 vs. uniprot
Match: A0A6H5KR20_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR20_9PHAE) HSP 1 Score: 99.0 bits (245), Expect = 3.030e-20 Identity = 54/137 (39.42%), Postives = 81/137 (59.12%), Query Frame = 2
Query: 293 GGNKANATNNPFIASVYHVWPGAAEDPK-FSAAFKKAVSTSRSFVLGDIRDGLRHLIIDLLQEDASLENASV-SDRFRGVEDRMMGINAQDVAIDHFFHRVFARFLKAHSARGRRDVSLPYLLGENRLMEDFLAEVM 697
GG +A NPF+A H WPGA ++ F A F KAV ++RS + +IR+ + +I L++E+AS N +D RGV +R+M ++ + + R+ RF KAH A R+ ++L YLLG RL EDFL +V+
Sbjct: 89 GGGPTSALTNPFLALGSHAWPGARQNLNTFPAIFVKAVVSARSELHAEIRNAIAEFLIPLMEEEASTNNPMTGADLLRGVRERIMDVDPESEELTGLMFRIMWRFTKAHQASTRKVLTLGYLLGPERLKEDFLGQVV 225
BLAST of mRNA_H-canaliculatus_F_contig14229.3325.1 vs. uniprot
Match: D8LH35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH35_ECTSI) HSP 1 Score: 96.3 bits (238), Expect = 8.060e-20 Identity = 54/137 (39.42%), Postives = 78/137 (56.93%), Query Frame = 2
Query: 293 GGNKANATNNPFIASVYHVWPGAAEDPK-FSAAFKKAVSTSRSFVLGDIRDGLRHLIIDLLQEDASLENASV-SDRFRGVEDRMMGINAQDVAIDHFFHRVFARFLKAHSARGRRDVSLPYLLGENRLMEDFLAEVM 697
GG NA NPF+A H WP A ++ F A F KAV ++RS + +IR+ + +I L++E+AS N +D RGV +R+M ++ + + R RF KAH A R+ ++L YLLG RL EDFL + M
Sbjct: 82 GGGPTNALTNPFLALGPHAWPRARQNLNTFPAIFVKAVVSARSELHAEIRNAIAEFLIPLMEEEASTNNPMTGADLLRGVRERIMDVDPESEELTGLMSRSMWRFTKAHQASTRKAITLGYLLGPERLKEDFLGQFM 218
BLAST of mRNA_H-canaliculatus_F_contig14229.3325.1 vs. uniprot
Match: A0A6H5K5R4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5R4_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 1.720e-18 Identity = 51/137 (37.23%), Postives = 80/137 (58.39%), Query Frame = 2
Query: 293 GGNKANATNNPFIASVYHVWPGAAEDPK-FSAAFKKAVSTSRSFVLGDIRDGLRHLIIDLLQEDASLENASV-SDRFRGVEDRMMGINAQDVAIDHFFHRVFARFLKAHSARGRRDVSLPYLLGENRLMEDFLAEVM 697
GG NA NPF+A H WPGA ++ F A KAV ++R+ + +IR+ + +I L++E+AS N +D RGV +R+M ++ + + R+ RF KAH A R+ ++L +LLG RL +DFL +V+
Sbjct: 239 GGGPTNALTNPFLALGSHAWPGARQNLNTFPAILVKAVVSARTELHAEIRNAIAEFLIPLMEEEASTNNPMTGADLLRGVRERIMDVDPESEELTGLMSRIMWRFTKAHQASTRKALTLGFLLGPERLKDDFLGQVV 375
BLAST of mRNA_H-canaliculatus_F_contig14229.3325.1 vs. uniprot
Match: A0A6H5KF40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF40_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 7.760e-12 Identity = 42/107 (39.25%), Postives = 65/107 (60.75%), Query Frame = 2
Query: 380 SAAFKKAVSTSRSFVLGDIRDGLRHLIIDLLQEDASLENASV-SDRFRGVEDRMMGINAQDVAIDHFFHRVFARFLKAHSARGRRDVSLPYLLGENRLMEDFLAEVM 697
+A F KAV ++RS + +IR + L+I L++E+AS N +D RGV +R+M ++ + + RV RF KA+ A R+ ++L YLLG RL EDFL +V+
Sbjct: 12 TAIFVKAVVSARSELHAEIRSAIAELLIPLMEEEASTNNPMTGADLLRGVCERIMDVDPESEELTGLMSRVMWRFTKAYQASTRKTLTLGYLLGPERLKEDFLGQVV 118
BLAST of mRNA_H-canaliculatus_F_contig14229.3325.1 vs. uniprot
Match: A0A6H5KZ86_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ86_9PHAE) HSP 1 Score: 71.2 bits (173), Expect = 9.570e-12 Identity = 41/105 (39.05%), Postives = 62/105 (59.05%), Query Frame = 2
Query: 383 AAFKKAVSTSRSFVLGDIRDGLRHLIIDLLQEDASLENA-SVSDRFRGVEDRMMGINAQDVAIDHFFHRVFARFLKAHSARGRRDVSLPYLLGENRLMEDFLAEV 694
A KAV +RS + GD+R L +I +++E+A+ N + +D RGV +++ I+ AI+ HRV R+ K H R D+S L+GE+RL EDFLA+V
Sbjct: 14 AVIIKAVVAARSELHGDVRGALVDFLIPMIEEEAATNNPRTAADLLRGVREQVADIDPAAEAINTLLHRVMWRYTKTHMQSTREDLSEGQLVGEDRLHEDFLAQV 118
BLAST of mRNA_H-canaliculatus_F_contig14229.3325.1 vs. uniprot
Match: A0A6H5KEJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEJ3_9PHAE) HSP 1 Score: 72.8 bits (177), Expect = 5.560e-11 Identity = 41/106 (38.68%), Postives = 64/106 (60.38%), Query Frame = 2
Query: 380 SAAFKKAVSTSRSFVLGDIRDGLRHLIIDLLQEDASLENA-SVSDRFRGVEDRMMGINAQDVAIDHFFHRVFARFLKAHSARGRRDVSLPYLLGENRLMEDFLAEV 694
+A KAV +RS + GD+R L +I +++E+A+ N + +D RGV +++ I+ AI+ HRV R+ KAH R D+S L+GE+RL EDFLA++
Sbjct: 177 TAVIIKAVVAARSELHGDVRGALVDFLIPMIEEEAATNNPRTAADLLRGVREQVADIDPAAEAINTLLHRVMWRYTKAHMQSTREDLSEGQLVGEDRLHEDFLAQI 282
BLAST of mRNA_H-canaliculatus_F_contig14229.3325.1 vs. uniprot
Match: D7FUZ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUZ7_ECTSI) HSP 1 Score: 69.3 bits (168), Expect = 1.060e-9 Identity = 34/90 (37.78%), Postives = 55/90 (61.11%), Query Frame = 2
Query: 431 DIRDGLRHLIIDLLQEDASLENASV-SDRFRGVEDRMMGINAQDVAIDHFFHRVFARFLKAHSARGRRDVSLPYLLGENRLMEDFLAEVM 697
+IR+ + ++ L++E+AS N +D FRGV +R+M ++ + + R+ RF KAH A R+ ++L YLLG RL EDFL +V+
Sbjct: 319 EIRNAIAEFLVPLMEEEASTNNPMTGADLFRGVRERIMDVDPESTELTGLMSRIMWRFTKAHQASTRKALTLGYLLGPERLKEDFLGQVV 408
BLAST of mRNA_H-canaliculatus_F_contig14229.3325.1 vs. uniprot
Match: A0A6H5KAW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW0_9PHAE) HSP 1 Score: 55.8 bits (133), Expect = 2.450e-6 Identity = 31/79 (39.24%), Postives = 48/79 (60.76%), Query Frame = 2
Query: 467 LLQEDASLENA-SVSDRFRGVEDRMMGINAQDVAIDHFFHRVFARFLKAHSARGRRDVSLPYLLGENRLMEDFLAEVMI 700
+++E+A+ + +D RGV +++ I+ AI+ HRV R+ KAH R D+S L+GE+RL EDFLA+V I
Sbjct: 1 MIEEEAATNTPRTAADLLRGVREQVADIDPAAEAINTLLHRVMWRYTKAHMQSTREDLSEGQLVGEDRLHEDFLAQVTI 79
BLAST of mRNA_H-canaliculatus_F_contig14229.3325.1 vs. uniprot
Match: A0A6H5K4A1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A1_9PHAE) HSP 1 Score: 56.6 bits (135), Expect = 3.770e-6 Identity = 30/77 (38.96%), Postives = 48/77 (62.34%), Query Frame = 2
Query: 467 LLQEDASLENA-SVSDRFRGVEDRMMGINAQDVAIDHFFHRVFARFLKAHSARGRRDVSLPYLLGENRLMEDFLAEV 694
+++E+A+ N + +D RGV +++ I+ AI+ HRV R+ KAH R D+S L+GE+RL EDFLA++
Sbjct: 1 MIEEEAATNNPRTAADLLRGVREQVADIDPAAEAINTLLHRVMWRYTKAHMQSTREDLSEGQLVGEDRLHEDFLAQI 77 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14229.3325.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14229.3325.1 >prot_H-canaliculatus_F_contig14229.3325.1 ID=prot_H-canaliculatus_F_contig14229.3325.1|Name=mRNA_H-canaliculatus_F_contig14229.3325.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=235bp MNFTTPPWPCTPRRRSNFGPCLRSLPLQCWNAPRARGPRGPRRRGKTRETback to top mRNA from alignment at H-canaliculatus_F_contig14229:379..2515+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14229.3325.1 ID=mRNA_H-canaliculatus_F_contig14229.3325.1|Name=mRNA_H-canaliculatus_F_contig14229.3325.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2137bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14229:379..2515+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14229:379..2515+ >mRNA_H-canaliculatus_F_contig14229.3325.1 ID=mRNA_H-canaliculatus_F_contig14229.3325.1|Name=mRNA_H-canaliculatus_F_contig14229.3325.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1410bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14229:379..2515+ (Hapterophycus canaliculatus Oshoro5f female)back to top |