mRNA_H-canaliculatus_F_contig14183.3296.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig14183.3296.1
Unique NamemRNA_H-canaliculatus_F_contig14183.3296.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig14183.3296.1 vs. uniprot
Match: D7FS87_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS87_ECTSI)

HSP 1 Score: 370 bits (951), Expect = 2.290e-122
Identity = 247/386 (63.99%), Postives = 268/386 (69.43%), Query Frame = 1
Query:    1 GATSTVWKMVDVDTLRVVAVKEMVVCDSTQSAVLRHELGVLHPQLQPLDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTGAGRGGGRPGPCPYMPRYYGSFVSQDDGARPRVSIVLECVSGVDLARWIEEVGRGGXXXXXXXXXXXETEGGDGEEDTGQARIRPELSPNAPSPXXXPRIPEMWLARICRDLLGALQYLHRRGRIHRDVKPANLLLGPEGARLADFGSTISEDEEE-GDKMHGTLRFMSPERLCARPYRPSSDLWAAGLTVATAALGENPIPRSANNFEAAEHAEVAFDKVVGHPASAALSPSLLDFLRVVLVPDPDRRPTVEQMLAHSFV 1155
            G+TSTVWK+VD++TLRVVAVKEM+VCDS Q  +LRHEL VLHPQLQPL P                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   RPGPCPYMPRYYGSFVS DDG RPRVSIV+E VSGVDLARWIEEVG  G                                      XX P IPEMWL R+CRD+L AL+YLH RG IHRDVKPAN+LLGP GARL DFGSTI + E+E G +MHGT+RFMSPERLCARPYRPSSDLWAAGLTVA+AALGENP+P SAN FEAA HAEVAF+ V  HPASA LSPSLLDFLR VLV DP+RRPTVEQMLAH ++
Sbjct:   72 GSTSTVWKVVDIETLRVVAVKEMIVCDSKQGTILRHELSVLHPQLQPLVPPKPKRLSGRRSRASAAPVGDAASSGTNTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVV----------------RPGPCPYMPRYYGSFVSHDDGGRPRVSIVMEYVSGVDLARWIEEVG--GSSGEGEGRREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPPIPEMWLPRVCRDMLEALRYLHERGFIHRDVKPANVLLGPGGARLVDFGSTIDDREDECGGRMHGTVRFMSPERLCARPYRPSSDLWAAGLTVASAALGENPVPHSANKFEAAGHAEVAFEMVRSHPASAGLSPSLLDFLRAVLVADPERRPTVEQMLAHPYL 439          
BLAST of mRNA_H-canaliculatus_F_contig14183.3296.1 vs. uniprot
Match: A0A6H5K7A9_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7A9_9PHAE)

HSP 1 Score: 365 bits (938), Expect = 1.070e-114
Identity = 222/394 (56.35%), Postives = 243/394 (61.68%), Query Frame = 1
Query:    1 GATSTVWKMVDVDTLRVVAVKEMVVCDSTQSAVLRHELGVLHPQLQPLDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTGAGRGGGRPGPCPYMPRYYGSFVSQDDGARPRVSIVLECVSGVDLARWIEEVGRGGXXXXXXXXXXXETEGGDGE--------EDTGQARIRPELSPNAPSPXXXPRIPEMWLARICRDLLGALQYLHRRGRIHRDVKPANLLLGPEGARLADFGSTISEDEEE-GDKMHGTLRFMSPERLCARPYRPSSDLWAAGLTVATAALGENPIPRSANNFEAAEHAEVAFDKVVGHPASAALSPSLLDFLRVVLVPDPDRRPTVEQMLAHSFV 1155
            G++STVWK+VD++TLRVVAVKEM+VCDS Q  +LRHEL VLHPQLQPL P                                     XXXXXXXX                                     RPGPCPYMPRYYGSFVS DDG RPRVSIV+E VSGVDLARWIEEVG                  GDGE                           XX P IPE+WL+R+CRD+L AL+YLH RG IHRDVKPAN+LLGP GARL DFGSTI   E+E G +MHGT+RFMSPERLCARPY PSSDLWAAGLTVA+AALGENP+P SA  FEAA HAEVAF+ V  HPASA LSPSLLDFLR VLV DP+RRPTVEQMLAH FV
Sbjct:   73 GSSSTVWKVVDIETLRVVAVKEMIVCDSKQGTILRHELSVLHPQLQPLVPPKPKRLSGRRSRASAAPISGAGAGDAASSGTNTPTIAXXXXXXXXSARRSGKKSLGGGKSVAAASTSAPVV-----------RPGPCPYMPRYYGSFVSHDDGGRPRVSIVMEYVSGVDLARWIEEVGGSS---------------GDGEGRREXXXXXXXXXXXXXXXXXXXXXXXXXRPPIPELWLSRVCRDILEALRYLHERGFIHRDVKPANVLLGPGGARLVDFGSTIDGREDECGGRMHGTVRFMSPERLCARPYWPSSDLWAAGLTVASAALGENPVPHSATKFEAAGHAEVAFEMVRSHPASAGLSPSLLDFLRAVLVADPERRPTVEQMLAHPFV 440          
BLAST of mRNA_H-canaliculatus_F_contig14183.3296.1 vs. uniprot
Match: A0A4D9DG65_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DG65_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.540e-21
Identity = 59/164 (35.98%), Postives = 88/164 (53.66%), Query Frame = 1
Query:  679 EMWLARICRDLLGALQYLHRRGRIHRDVKPANLLLGPEGA-RLADFGST--ISEDEEEGDKMHGTLRFMSPERLCARPYRPSSDLWAAGLTVATAALGENPIPRSANNFEAAEHAEVAFDKVVGH--PASAALSPSLLDFLRVVLVPDPDRRPTVEQMLAHSFV 1155
            E  LA + R++L  L YLH R +IHRD+KP NLL+  +G  ++ADFG +  ++   +      GT+ +MSPER+    Y   +D+W+ GL++   ALG  P  R  ++    E      D+      P     SP   DFLR+ L+ DP  RP+ E +L H +V
Sbjct:  594 EAVLANMARNILVGLNYLHERQKIHRDIKPGNLLMNTKGVVKIADFGVSRNLTGTSDLSKTFVGTVGYMSPERIQGHKYNAKADVWSFGLSLLACALGAFPFERQVSSLSYFELVNAVCDEPSPELPPGDRRFSPEFRDFLRLCLLKDPSERPSAETLLFHPYV 757          
BLAST of mRNA_H-canaliculatus_F_contig14183.3296.1 vs. uniprot
Match: W7U1J4_9STRA (Mitogen-activated protein kinase kinase 2 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U1J4_9STRA)

HSP 1 Score: 105 bits (262), Expect = 7.670e-21
Identity = 58/164 (35.37%), Postives = 88/164 (53.66%), Query Frame = 1
Query:  679 EMWLARICRDLLGALQYLHRRGRIHRDVKPANLLLGPEGA-RLADFGST--ISEDEEEGDKMHGTLRFMSPERLCARPYRPSSDLWAAGLTVATAALGENPIPRSANNFEAAEHAEVAFDKVVGH--PASAALSPSLLDFLRVVLVPDPDRRPTVEQMLAHSFV 1155
            E  LA + R++L  L YLH R +IHRD+KP NLL+  +G  ++ADFG +  ++   +      GT+ +MSPER+    Y   +D+W+ GL++   ALG  P  R  ++    E      D+      P     SP   DFLR+ L+ +P  RP+ E +L H +V
Sbjct:  865 EAVLANMARNILVGLNYLHERQKIHRDIKPGNLLMNTKGVVKIADFGVSRNLTGTSDLSKTFVGTVGYMSPERIQGHKYNAKADVWSFGLSLLACALGAFPYERQVSSLSYFELVNAVCDEPSPELPPGDRRFSPEFRDFLRLCLLKNPSERPSAENLLFHPYV 1028          
BLAST of mRNA_H-canaliculatus_F_contig14183.3296.1 vs. uniprot
Match: A0A7S2GCB3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GCB3_9STRA)

HSP 1 Score: 103 bits (258), Expect = 2.330e-20
Identity = 84/280 (30.00%), Postives = 123/280 (43.93%), Query Frame = 1
Query:  415 YMPRYYGSFVSQDDGARPRVSIVLECVSGVDLARWIEEVGRGGXXXXXXXXXXXETEGGDGEEDTGQARIRPELSPNAPSPXXXPRIPEMWLARICRDLLGALQYLHRRGRIHRDVKPANLLLGPEG-ARLADFG----------------------------STI-SEDEEEGDKMH---GTLRFMSPERLCARPYRPSSDLWAAGLTVATAALGENPIPRSANNFEAAEHAEVAFDKVVGHPASAALSPSLLDFLRVVLVPDPDRRPTVEQMLAHSFV 1155
            YM  Y+G+FVS +D    + S+++E ++  DL  W+E                                 + EL             PE +LA I   +  AL  L+ + R+HRDVKP N+L+   G  +L+DFG                            STI S  E   + +    GT R+MSPERL A  Y  S+D+WA GLT+AT  LGE P  +  + ++  +++E+   +V+       LS  L DF+   L  DP+ RP  + ML H FV
Sbjct:  449 YMVNYHGAFVSDEDN---KASLMVEFMANGDLESWVE--------------------------------AKHEL-------------PEEFLAVIAYQVCKALASLNEKKRMHRDVKPGNVLISSTGQVKLSDFGMCADVKGATDTGCDMNIRPNAGVGFASGSTILSRQERHSETLKDFVGTYRYMSPERLTADEYSYSADVWALGLTLATCVLGECPFSKDCSFWQLLQNSELPETEVLKRQD---LSTDLRDFITTCLKKDPNERPEAKDMLQHPFV 677          
BLAST of mRNA_H-canaliculatus_F_contig14183.3296.1 vs. uniprot
Match: A0A7H8R580_9EURO (Protein kinase domain-containing protein n=2 Tax=Talaromyces sect. Islandici TaxID=2752542 RepID=A0A7H8R580_9EURO)

HSP 1 Score: 102 bits (253), Expect = 7.020e-20
Identity = 64/172 (37.21%), Postives = 93/172 (54.07%), Query Frame = 1
Query:  673 IPEMWLARICRDLLGALQYLHRRGRIHRDVKPANLLLGPEG-ARLADFG--STISEDEEEGDKMHGTLRFMSPERLCARPYRPSSDLWAAGLTVATAALGENPIPRSANNFEAAEHAEVAFDKVVGH-PASAA-------LSPSLLDFLRVVLVPDPDRRPTVEQMLAHSFV 1155
            + E ++A +CR+LL  L YLHR G+IHRD+K AN+LL   G  +LADFG  + +S  + + +   GT  +M+PE +    Y   +D+W+ G+T    A GE P            HA     KV+ H P + A        S S  DF+   L+ DPDRRPT +++L H F+
Sbjct:  103 VDETYIAIVCRELLLGLDYLHREGKIHRDIKAANVLLSHSGKVKLADFGVAAQLSNIKSQRNTFVGTPFWMAPEVIQQSGYDFKADIWSLGITAMELANGEPP------------HASTHPMKVLFHIPKAPAPRLEGNEFSQSFKDFVAQCLIKDPDRRPTAKELLKHKFI 262          
BLAST of mRNA_H-canaliculatus_F_contig14183.3296.1 vs. uniprot
Match: D7FHW3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHW3_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 1.190e-19
Identity = 60/147 (40.82%), Postives = 84/147 (57.14%), Query Frame = 1
Query:  718 ALQYLHRRGRIHRDVKPANLLLGPEG-ARLADFGSTISEDEEEGDKMHGTLRFMSPERLCARPYRPSSDLWAAGLTVATAALGENPIPRSANNFEAAEHAEVAFDKVVGHPASAALSPSLLDFLRVVLVPDPDRRPTVEQMLAHSFV 1155
            AL ++H  GR+HRDVKPANLL+   G  +L DFG+      E   +M GT RFM+PERL        SDLW+ GL++ATAA G++ I + +N F   + A     ++     +  LS  L+DFL   L  DP RRP +  ++ H F+
Sbjct:    2 ALDFVHSCGRVHRDVKPANLLITRNGDLKLGDFGAA---GVENSSRMVGTQRFMAPERLKGHRATAQSDLWSLGLSLATAAFGDDFISQGSNQFVQLDMACRVRRRL---SKTTTLSAELMDFLHSCLSRDPARRPALRDLMKHPFL 142          
BLAST of mRNA_H-canaliculatus_F_contig14183.3296.1 vs. uniprot
Match: A0A1X6NJC2_PORUM (Protein kinase domain-containing protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJC2_PORUM)

HSP 1 Score: 96.7 bits (239), Expect = 2.940e-19
Identity = 64/163 (39.26%), Postives = 83/163 (50.92%), Query Frame = 1
Query:  676 PEMWLARICRDLLGALQYLHRRGRIHRDVKPANLLLGPEGA-RLADFGSTI--SEDEEEGDKMHGTLRFMSPERLCARPYRPSSDLWAAGLTVATAALGENPIPRSANNFEAAEHAEVAFDKVVGHPASAALSPSLLDFLRVVLVPDPDRRPTVEQMLAHSFV 1155
            PE  +A I R L+  L YLH RG IHRDVKPAN+L+   G  ++ DFG +   S     G  + GT  +++PE +  RPY  S D+W+ G TV   A G  P          A  A VA  K    P    LSP+  +FL    V DP RRP+  Q+  H F+
Sbjct:  101 PEPLVAEITRQLVDGLAYLHSRGVIHRDVKPANVLVTRSGVVKICDFGVSARGSVPGISGRTVCGTPHYIAPEVIEQRPYTESVDVWSLGCTVMELATGRRPWHELT-----AMSALVALSKSRTPPLPPGLSPACRNFLGTCWVRDPARRPSAAQLRRHPFL 258          
BLAST of mRNA_H-canaliculatus_F_contig14183.3296.1 vs. uniprot
Match: A0A177THX7_9BASI (Protein kinase domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177THX7_9BASI)

HSP 1 Score: 95.1 bits (235), Expect = 6.010e-19
Identity = 56/166 (33.73%), Postives = 90/166 (54.22%), Query Frame = 1
Query:  679 EMWLARICRDLLGALQYLHRRGRIHRDVKPANLLLGPEG-ARLADFG--STISEDEEEGDKMHGTLRFMSPERLCARPYRPSSDLWAAGLTVATAALGENPIPRSANNFEAAEHAEVAFDKVVGHPASAAL----SPSLLDFLRVVLVPDPDRRPTVEQMLAHSFV 1155
            E  +A +CR+LL  L+YLH  G+IHRD+K AN+LL   G  +LADFG  + +S ++   +   GT  +M+PE +    Y   +D+W+ G+T    A GE P+         AE+  +    ++    S  L    S +  DF+ + L+ DP  RPT ++++ H F+
Sbjct:   20 EQHIAIVCRELLLGLEYLHNEGKIHRDIKAANVLLSASGKVKLADFGVAAQLSNNKSRRNTFVGTPFWMAPEVIRQAGYDSKADIWSLGITAIEMAKGEPPL---------AEYHPMRVLFLIPKAKSPVLEGNFSSAFKDFVDLCLIKDPKHRPTTKELITHRFI 176          
BLAST of mRNA_H-canaliculatus_F_contig14183.3296.1 vs. uniprot
Match: A0A0H5QLB2_9EUKA (Protein kinase domain-containing protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QLB2_9EUKA)

HSP 1 Score: 97.4 bits (241), Expect = 6.720e-19
Identity = 60/163 (36.81%), Postives = 91/163 (55.83%), Query Frame = 1
Query:  673 IPEMWLARICRDLLGALQYLHRRGRIHRDVKPANLLLGPEG-ARLADFGSTISEDE-EEGDKMHGTLRFMSPERLCARPYRPSSDLWAAGLTVATAALGENPIPRSANNFEAAEHAEVAFDKVVGHPASAALSPSLLDFLRVVLVPDPDRRPTVEQMLAHSFV 1155
            +PE  L RI +  L  L+++H R ++HRD+KP N+LL   G A+LADFG     D         GT  +MSPER+ ++PY  S+D+W+ GLT+AT A G  P   +   F     + +  D     P S + S  L +F+   L+ DP++R T E++L H ++
Sbjct:  153 LPESALQRIAKQTLFGLRHMHLRRKVHRDIKPGNILLNSAGEAKLADFGIVKELDAINNAQTFVGTQIYMSPERIQSQPYGCSADIWSFGLTLATCASGRFPYDDAHKGFIHVFQS-ITMDPPPVLPKSRS-SVGLRNFVSKCLIKDPEQRWTAERLLTHPWL 313          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14183.3296.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS87_ECTSI2.290e-12263.99Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A6H5K7A9_9PHAE1.070e-11456.35Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A4D9DG65_9STRA1.540e-2135.98Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7U1J4_9STRA7.670e-2135.37Mitogen-activated protein kinase kinase 2 n=2 Tax=... [more]
A0A7S2GCB3_9STRA2.330e-2030.00Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7H8R580_9EURO7.020e-2037.21Protein kinase domain-containing protein n=2 Tax=T... [more]
D7FHW3_ECTSI1.190e-1940.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A1X6NJC2_PORUM2.940e-1939.26Protein kinase domain-containing protein (Fragment... [more]
A0A177THX7_9BASI6.010e-1933.73Protein kinase domain-containing protein n=1 Tax=T... [more]
A0A0H5QLB2_9EUKA6.720e-1936.81Protein kinase domain-containing protein (Fragment... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14183contigH-canaliculatus_F_contig14183:1407..2672 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score357.5
Seed ortholog evalue7.9e-96
Seed eggNOG ortholog2880.D7FS87
EggNOG free text desc.MAP kinase kinase activity
EggNOG OGsKOG0581@1,KOG0581@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSerine/threonine/dual specificity protein kinase, catalytic domain
Ec32 orthologEc-05_004950.1
Exons2
Model size1155
Cds size1131
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14183.3296.1prot_H-canaliculatus_F_contig14183.3296.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig14183 1407..2648 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929167.7231662-CDS-H-canaliculatus_F_contig14183:1406..21661622929167.7231662-CDS-H-canaliculatus_F_contig14183:1406..2166Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14183 1407..2166 -
1696845703.22067-CDS-H-canaliculatus_F_contig14183:1406..21661696845703.22067-CDS-H-canaliculatus_F_contig14183:1406..2166Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14183 1407..2166 -
1622929167.7392752-CDS-H-canaliculatus_F_contig14183:2277..26481622929167.7392752-CDS-H-canaliculatus_F_contig14183:2277..2648Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14183 2278..2648 -
1696845703.2383788-CDS-H-canaliculatus_F_contig14183:2277..26481696845703.2383788-CDS-H-canaliculatus_F_contig14183:2277..2648Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig14183 2278..2648 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929167.76707-UTR-H-canaliculatus_F_contig14183:2648..26721622929167.76707-UTR-H-canaliculatus_F_contig14183:2648..2672Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig14183 2649..2672 -
1696845703.2481782-UTR-H-canaliculatus_F_contig14183:2648..26721696845703.2481782-UTR-H-canaliculatus_F_contig14183:2648..2672Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig14183 2649..2672 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig14183.3296.1

>prot_H-canaliculatus_F_contig14183.3296.1 ID=prot_H-canaliculatus_F_contig14183.3296.1|Name=mRNA_H-canaliculatus_F_contig14183.3296.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=377bp
MVDVDTLRVVAVKEMVVCDSTQSAVLRHELGVLHPQLQPLDPPPPPKPTR
LSGRRSRGGGGGGGSSASTQMSAAVAGADAAAALAAGTAAAAAASAAPTA
KRGGKTRKDCGGGGGPTGAGRGGGRPGPCPYMPRYYGSFVSQDDGARPRV
SIVLECVSGVDLARWIEEVGRGGGGGGRESMENEETEGGDGEEDTGQARI
RPELSPNAPSPPPPPRIPEMWLARICRDLLGALQYLHRRGRIHRDVKPAN
LLLGPEGARLADFGSTISEDEEEGDKMHGTLRFMSPERLCARPYRPSSDL
WAAGLTVATAALGENPIPRSANNFEAAEHAEVAFDKVVGHPASAALSPSL
LDFLRVVLVPDPDRRPTVEQMLAHSFV
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mRNA from alignment at H-canaliculatus_F_contig14183:1407..2672-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig14183.3296.1 ID=mRNA_H-canaliculatus_F_contig14183.3296.1|Name=mRNA_H-canaliculatus_F_contig14183.3296.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1266bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14183:1407..2672- (Hapterophycus canaliculatus Oshoro5f female)
GGCGCGACCAGTACCGTTTGGAAGATGGTGGACGTGGACACCCTCCGCGT GGTGGCCGTCAAGGAGATGGTCGTCTGCGACTCCACGCAGAGCGCCGTCC TGCGGCACGAGCTGGGCGTGCTCCACCCACAGCTACAACCGCTCGATCCC CCCCCACCCCCGAAGCCGACACGCCTCTCCGGCCGAAGAAGTAGAGGAGG AGGAGGAGGAGGAGGAAGCTCGGCGTCGACCCAGATGAGCGCAGCTGTCG CGGGCGCCGATGCCGCTGCCGCTTTGGCCGCCGGGACCGCTGCTGCGGCC GCCGCCTCCGCCGCCCCCACGGCGAAGAGGGGGGGAAAGACTCGCAAGGA CTGCGGCGGGGGCGGGGGTCCTACCGGCGCCGGCCGAGGGGGAGGGTCTG CGGGCCTCGGCCGCTCCGGCATCGGAAAGGTTAGTGTTAGCAACGGTGTT CTTCGTGCGAGTAGAAACGGCCGCGTTGCCACTCCCGCCGCCGCCGCGGT GCCCAGACGGCCGGGACCGTGCCCGTACATGCCGCGCTACTACGGATCCT TCGTCTCCCAAGACGACGGGGCACGGCCGCGAGTGAGCATCGTGCTGGAG TGCGTCTCTGGCGTGGACCTGGCGCGATGGATAGAGGAGGTGGGCCGCGG CGGCGGCGGCGGCGGCAGGGAGAGCATGGAGAACGAGGAGACAGAGGGCG GTGATGGGGAAGAGGACACGGGGCAAGCACGAATACGGCCCGAGCTATCG CCGAACGCACCGTCGCCGCCGCCGCCGCCGCGAATACCGGAGATGTGGCT GGCGAGGATCTGTCGCGACCTGCTCGGGGCCCTGCAGTACTTGCACCGAC GGGGGCGCATCCACCGGGACGTGAAACCGGCGAACCTGCTGCTGGGGCCG GAGGGGGCGAGGCTGGCAGACTTCGGGAGCACCATCAGCGAGGACGAGGA AGAGGGAGACAAGATGCACGGGACGCTCAGGTTCATGAGCCCCGAACGCC TCTGCGCGAGGCCGTACCGGCCGAGCTCGGACCTCTGGGCCGCGGGGCTG ACGGTGGCGACGGCGGCGCTGGGGGAGAACCCGATACCGCGCAGCGCGAA CAACTTCGAGGCGGCGGAGCACGCGGAGGTGGCGTTCGACAAGGTGGTGG GCCACCCGGCCTCCGCCGCCCTGTCGCCGAGTTTGCTGGACTTCCTCAGG GTGGTGCTGGTGCCCGACCCGGACCGGAGGCCTACCGTGGAGCAGATGCT CGCGCACTCCTTCGTG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14183:1407..2672-

>mRNA_H-canaliculatus_F_contig14183.3296.1 ID=mRNA_H-canaliculatus_F_contig14183.3296.1|Name=mRNA_H-canaliculatus_F_contig14183.3296.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2262bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14183:1407..2672- (Hapterophycus canaliculatus Oshoro5f female)
ATGGTGGACGTGGACACCCTCCGCGTGGTGGCCGTCAAGGAGATGGTCGT
CTGCGACTCCACGCAGAGCGCCGTCCTGCGGCACGAGCTGGGCGTGCTCC
ACCCACAGCTACAACCGCTCGATCCCCCCCCACCCCCGAAGCCGACACGC
CTCTCCGGCCGAAGAAGTAGAGGAGGAGGAGGAGGAGGAGGAAGCTCGGC
GTCGACCCAGATGAGCGCAGCTGTCGCGGGCGCCGATGCCGCTGCCGCTT
TGGCCGCCGGGACCGCTGCTGCGGCCGCCGCCTCCGCCGCCCCCACGGCG
AAGAGGGGGGGAAAGACTCGCAAGGACTGCGGCGGGGGCGGGGGTCCTAC
CGGCGCCGGCCGAGGGGGAGGATGGTGGACGTGGACACCCTCCGCGTGGT
GGCCGTCAAGGAGATGGTCGTCTGCGACTCCACGCAGAGCGCCGTCCTGC
GGCACGAGCTGGGCGTGCTCCACCCACAGCTACAACCGCTCGATCCCCCC
CCACCCCCGAAGCCGACACGCCTCTCCGGCCGAAGAAGTAGAGGAGGAGG
AGGAGGAGGAGGAAGCTCGGCGTCGACCCAGATGAGCGCAGCTGTCGCGG
GCGCCGATGCCGCTGCCGCTTTGGCCGCCGGGACCGCTGCTGCGGCCGCC
GCCTCCGCCGCCCCCACGGCGAAGAGGGGGGGAAAGACTCGCAAGGACTG
CGGCGGGGGCGGGGGTCCTACCGGCGCCGGCCGAGGGGGAGGACGGCCGG
GACCGTGCCCGTACATGCCGCGCTACTACGGATCCTTCGTCTCCCAAGAC
GACGGGGCACGGCCGCGAGTGAGCATCGTGCTGGAGTGCGTCTCTGGCGT
GGACCTGGCGCGATGGATAGAGGAGGTGGGCCGCGGCGGCGGCGGCGGCG
GCAGGGAGAGCATGGAGAACGAGGAGACAGAGGGCGGTGATGGGGAAGAG
GACACGGGGCAAGCACGAATACGGCCCGAGCTATCGCCGAACGCACCGTC
GCCGCCGCCGCCGCCGCGAATACCGGAGATGTGGCTGGCGAGGATCTGTC
GCGACCTGCTCGGGGCCCTGCAGTACTTGCACCGACGGGGGCGCATCCAC
CGGGACGTGAAACCGGCGAACCTGCTGCTGGGGCCGGAGGGGGCGAGGCT
GGCAGACTTCGGGAGCACCATCAGCGAGGACGAGGAAGAGGGAGACAAGA
TGCACGGGACGCTCAGGTTCATGAGCCCCGAACGCCTCTGCGCGAGGCCG
TACCGGCCGAGCTCGGACCTCTGGGCCGCGGGGCTGACGGTGGCGACGGC
GGCGCTGGGGGAGAACCCGATACCGCGCAGCGCGAACAACTTCGAGGCGG
CGGAGCACGCGGAGGTGGCGTTCGACAAGGTGGTGGGCCACCCGGCCTCC
GCCGCCCTGTCGCCGAGTTTGCTGGACTTCCTCAGGGTGGTGCTGGTGCC
CGACCCGGACCGGAGGCCTACCGTGGAGCAGATGCTCGCGCACTCCTTCG
TGACGGCCGGGACCGTGCCCGTACATGCCGCGCTACTACGGATCCTTCGT
CTCCCAAGACGACGGGGCACGGCCGCGAGTGAGCATCGTGCTGGAGTGCG
TCTCTGGCGTGGACCTGGCGCGATGGATAGAGGAGGTGGGCCGCGGCGGC
GGCGGCGGCGGCAGGGAGAGCATGGAGAACGAGGAGACAGAGGGCGGTGA
TGGGGAAGAGGACACGGGGCAAGCACGAATACGGCCCGAGCTATCGCCGA
ACGCACCGTCGCCGCCGCCGCCGCCGCGAATACCGGAGATGTGGCTGGCG
AGGATCTGTCGCGACCTGCTCGGGGCCCTGCAGTACTTGCACCGACGGGG
GCGCATCCACCGGGACGTGAAACCGGCGAACCTGCTGCTGGGGCCGGAGG
GGGCGAGGCTGGCAGACTTCGGGAGCACCATCAGCGAGGACGAGGAAGAG
GGAGACAAGATGCACGGGACGCTCAGGTTCATGAGCCCCGAACGCCTCTG
CGCGAGGCCGTACCGGCCGAGCTCGGACCTCTGGGCCGCGGGGCTGACGG
TGGCGACGGCGGCGCTGGGGGAGAACCCGATACCGCGCAGCGCGAACAAC
TTCGAGGCGGCGGAGCACGCGGAGGTGGCGTTCGACAAGGTGGTGGGCCA
CCCGGCCTCCGCCGCCCTGTCGCCGAGTTTGCTGGACTTCCTCAGGGTGG
TGCTGGTGCCCGACCCGGACCGGAGGCCTACCGTGGAGCAGATGCTCGCG
CACTCCTTCGTG
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