mRNA_H-canaliculatus_F_contig1417.3289.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1417.3289.1 vs. uniprot
Match: D7FT33_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT33_ECTSI) HSP 1 Score: 218 bits (555), Expect = 5.820e-61 Identity = 107/131 (81.68%), Postives = 114/131 (87.02%), Query Frame = 1
Query: 109 MPNKITIDLIRRKAEHNEGLIHTLEELSLHQEELETIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNISKVEGLQSCEFLNKLDLTVNFVDMDELESSVTAMQGNRHLADLYMMGNPCQ 501
MPNKITIDLIRR+AEHNEGLIHTLEELSLHQEELE+IDDTLGCNCRRLKILYLQNNIIG+M+NLHHMKELEYLNLAL KLDLTVNFVDMDELE+SV+AM+GNRHL DLYMMGNPCQ
Sbjct: 1 MPNKITIDLIRRRAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIGKMQNLHHMKELEYLNLALXXXXXXXXXXXXXXXXKLDLTVNFVDMDELENSVSAMEGNRHLKDLYMMGNPCQ 131
BLAST of mRNA_H-canaliculatus_F_contig1417.3289.1 vs. uniprot
Match: A0A835Z7F5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7F5_9STRA) HSP 1 Score: 192 bits (489), Expect = 4.290e-53 Identity = 91/132 (68.94%), Postives = 111/132 (84.09%), Query Frame = 1
Query: 109 MPNKITIDLIRRKAEHNEGLIHTLEELSLHQEELETIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNISKVEGLQSCEFLNKLDLTVNFVDMDELESSVTAMQGNRHLADLYMMGNPCQV 504
M I+++L+RR+AEHNEGLIHTLEE+SLHQEE+E I+D LG NCR LKILYLQNNII +M+NLHH+KELEYLNLALNNI+ +EGL SCE LNKLDLTVNF+D+D+L+ S+ + +L DLYMMGNP Q
Sbjct: 1 MAPVISLELVRRRAEHNEGLIHTLEEISLHQEEIERINDVLGKNCRHLKILYLQNNIINKMENLHHLKELEYLNLALNNITIIEGLGSCEMLNKLDLTVNFIDLDKLQESIEHLASCPNLKDLYMMGNPAQA 132
BLAST of mRNA_H-canaliculatus_F_contig1417.3289.1 vs. uniprot
Match: A0A7S4E455_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E455_9STRA) HSP 1 Score: 194 bits (493), Expect = 9.170e-53 Identity = 89/130 (68.46%), Postives = 111/130 (85.38%), Query Frame = 1
Query: 115 NKITIDLIRRKAEHNEGLIHTLEELSLHQEELETIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNISKVEGLQSCEFLNKLDLTVNFVDMDELESSVTAMQGNRHLADLYMMGNPCQV 504
N++T+ LIR++AEHNEG+I TLEEL+LHQEEL I+ LG CR+LKILYLQNNII ++++LHH+K+LEYLN+ALNN+SK+EGL CEFLNKLDLTVNFVD+DELESS+ + HL DLYMMGNPC+
Sbjct: 25 NRMTLKLIRKRAEHNEGIISTLEELTLHQEELVAIEPCLGTTCRKLKILYLQNNIISKIQHLHHLKDLEYLNMALNNVSKIEGLDKCEFLNKLDLTVNFVDVDELESSMDHLADREHLKDLYMMGNPCEA 154
BLAST of mRNA_H-canaliculatus_F_contig1417.3289.1 vs. uniprot
Match: A0A7S3HTQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTQ6_9STRA) HSP 1 Score: 186 bits (472), Expect = 1.560e-49 Identity = 90/141 (63.83%), Postives = 114/141 (80.85%), Query Frame = 1
Query: 79 KARFASHRPQMPNKITIDLIRRKAEHNEGLIHTLEELSLHQEELETIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNISKVEGLQSCEFLNKLDLTVNFVDMDELESSVTAMQGNRHLADLYMMGNPCQ 501
K F+ MP IT DL+R++AEHNEG+I TLEE+SLHQEELE+I++ LG CR+LKILYLQNNII +M+NL HMK+L YLNLALNN++K+EGL +CEFL KLDLTVNF+D+DEL+ S+ +Q +L DLYMMGNP +
Sbjct: 15 KPLFSLILSNMP-LITRDLLRKRAEHNEGMISTLEEISLHQEELESINEVLGMTCRKLKILYLQNNIISKMENLFHMKDLVYLNLALNNVTKIEGLHNCEFLGKLDLTVNFIDLDELKDSIDHLQSRTNLHDLYMMGNPSE 154
BLAST of mRNA_H-canaliculatus_F_contig1417.3289.1 vs. uniprot
Match: A0A662WUB0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WUB0_9STRA) HSP 1 Score: 184 bits (466), Expect = 9.710e-49 Identity = 90/131 (68.70%), Postives = 112/131 (85.50%), Query Frame = 1
Query: 109 MPNKITIDLIRRKAEHNEGLIHTLEELSLHQEELETIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNISKVEGLQSCEFLNKLDLTVNFVDMDELESSVTAMQGNRHLADLYMMGNPCQ 501
MP +IT++L+R++AEHNEG+I TLEE+SLHQEELE I+ +G CR+L+ILYLQNNII +M++L HMKEL YLNLALNNISK+EGLQ CEFLNKLDLTVNFVD D LE S+ ++ +HL +LYM+GNPCQ
Sbjct: 1 MP-RITVELLRKRAEHNEGIISTLEEISLHQEELEKIE-VIGTLCRKLQILYLQNNIIEKMEDLTHMKELRYLNLALNNISKIEGLQCCEFLNKLDLTVNFVDFDTLEDSIDHLKPLQHLRELYMLGNPCQ 129
BLAST of mRNA_H-canaliculatus_F_contig1417.3289.1 vs. uniprot
Match: W7TJA0_9STRA (Leucine-rich repeat containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJA0_9STRA) HSP 1 Score: 181 bits (460), Expect = 9.420e-48 Identity = 88/132 (66.67%), Postives = 108/132 (81.82%), Query Frame = 1
Query: 109 MPNKITIDLIRRKAEHNEGLIHTLEELSLHQEELETIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNISKVEGLQSCEFLNKLDLTVNFVDMDELESSVTAMQGNRHLADLYMMGNPCQV 504
MP +IT DL+R++AEHNEG++ TLEEL+LHQEELE I+D LG CR +KILYLQNN++ ++NLHH+K LEYLN+ALNNIS VEGL SCEFL KLDLTVNF+D D LE+S+T + RHL DLY +GNP Q
Sbjct: 1 MP-EITRDLLRKRAEHNEGILTTLEELALHQEELEGINDILGKTCREIKILYLQNNLLPRIENLHHLKCLEYLNVALNNISVVEGLGSCEFLRKLDLTVNFIDFDALEASITHLASLRHLRDLYFLGNPAQT 131
BLAST of mRNA_H-canaliculatus_F_contig1417.3289.1 vs. uniprot
Match: A0A6A3GCM2_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GCM2_9STRA) HSP 1 Score: 174 bits (441), Expect = 2.510e-47 Identity = 84/121 (69.42%), Postives = 102/121 (84.30%), Query Frame = 1
Query: 142 RKAEHNEGLIHTLEELSLHQEELETIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNISKVEGLQSCEFLNKLDLTVNFVDMDELESSVTAMQGNRHLADLYMMGNPCQV 504
++AEHNEG+I TLEE+SLHQEELE I+ +G CR+L+ILYLQNNII +M++L HMKEL YLN+ALNNI K+EGLQSCEFLNKLDLTVNFVD D LE S+ ++ RHL +LYM+GNPCQ
Sbjct: 1 KRAEHNEGIISTLEEISLHQEELEKIE-VIGTLCRKLRILYLQNNIIDKMEDLTHMKELRYLNVALNNIRKIEGLQSCEFLNKLDLTVNFVDFDTLEESIDHLKPLRHLRELYMLGNPCQA 120
BLAST of mRNA_H-canaliculatus_F_contig1417.3289.1 vs. uniprot
Match: A0A024GMQ1_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GMQ1_9STRA) HSP 1 Score: 172 bits (435), Expect = 6.310e-45 Identity = 81/127 (63.78%), Postives = 105/127 (82.68%), Query Frame = 1
Query: 121 ITIDLIRRKAEHNEGLIHTLEELSLHQEELETIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNISKVEGLQSCEFLNKLDLTVNFVDMDELESSVTAMQGNRHLADLYMMGNPCQ 501
IT +L+R++AEHNEG++ TLEE+SLHQEE+E ID +G CR+L+I+YLQNNII EM+NL H+K+L YLNLALNNI +++GL SCEFL KLDLTVNF+D D L+ SV ++ HL +LYM+GNPCQ
Sbjct: 4 ITPELLRKRAEHNEGMLSTLEEISLHQEEIEKID-LIGTLCRKLRIVYLQNNIISEMENLIHLKDLRYLNLALNNIKQIKGLHSCEFLEKLDLTVNFIDFDSLQQSVEHLKPLGHLKELYMLGNPCQ 129
BLAST of mRNA_H-canaliculatus_F_contig1417.3289.1 vs. uniprot
Match: A0A7S2CFI3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CFI3_9STRA) HSP 1 Score: 164 bits (414), Expect = 7.730e-45 Identity = 81/132 (61.36%), Postives = 100/132 (75.76%), Query Frame = 1
Query: 109 MPNKITIDLIRRKAEHNEGLIHTLEELSLHQEELETIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNISKVEGLQSCEFLNKLDLTVNFVDMDELESSVTAMQGNRHLADLYMMGNPCQV 504
MP+ +T LIR++AEHNEG+I +LEE+SLHQEELE I + LG CR+LKI+YLQNNII +M+NLHH+KELEYLNLALNNI NKLDLTVNF+D D LE S+ + +HL +LYMMGNP Q+
Sbjct: 1 MPH-LTRALIRKRAEHNEGIISSLEEISLHQEELEGIREVLGTTCRKLKIVYLQNNIIPKMENLHHLKELEYLNLALNNIXXXXXXXXXXXXNKLDLTVNFIDFDHLEESIDQLVSRQHLRELYMMGNPSQM 131
BLAST of mRNA_H-canaliculatus_F_contig1417.3289.1 vs. uniprot
Match: A0A7J6M5A5_PEROL (Uncharacterized protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6M5A5_PEROL) HSP 1 Score: 166 bits (420), Expect = 2.290e-41 Identity = 75/126 (59.52%), Postives = 104/126 (82.54%), Query Frame = 1
Query: 121 ITIDLIRRKAEHNEGLIHTLEELSLHQEELETIDDTLGCNCRRLKILYLQNNIIGEMKNLHHMKELEYLNLALNNISKVEGLQSCEFLNKLDLTVNFVDMDELESSVTAMQGNRHLADLYMMGNPC 498
+T +LIR++AEHNEG++ LEE++LHQEE+E I+ LG CRR+KIL LQNN+IG ++NL+ +KELEYLN+A+NNI K+EGL CE L KLDLTVNF+D++ L+ S+T ++ N +L DLY++GNPC
Sbjct: 161 LTEELIRKRAEHNEGILADLEEVALHQEEIEKIEKCLGDRCRRIKILLLQNNVIGRLENLNKLKELEYLNVAVNNIEKIEGLARCESLRKLDLTVNFIDIENLKDSITNLECNYNLEDLYLLGNPC 286 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1417.3289.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1417.3289.1 >prot_H-canaliculatus_F_contig1417.3289.1 ID=prot_H-canaliculatus_F_contig1417.3289.1|Name=mRNA_H-canaliculatus_F_contig1417.3289.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=134bp MPNKITIDLIRRKAEHNEGLIHTLEELSLHQEELETIDDTLGCNCRRLKIback to top mRNA from alignment at H-canaliculatus_F_contig1417:20188..23300+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1417.3289.1 ID=mRNA_H-canaliculatus_F_contig1417.3289.1|Name=mRNA_H-canaliculatus_F_contig1417.3289.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3113bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1417:20188..23300+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1417:20188..23300+ >mRNA_H-canaliculatus_F_contig1417.3289.1 ID=mRNA_H-canaliculatus_F_contig1417.3289.1|Name=mRNA_H-canaliculatus_F_contig1417.3289.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=804bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1417:20188..23300+ (Hapterophycus canaliculatus Oshoro5f female)back to top |