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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-18_001190.1 |
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 978 |
| Cds size | 621 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929163.3276405-UTR-H-canaliculatus_F_contig1413:20311..20352 | 1622929163.3276405-UTR-H-canaliculatus_F_contig1413:20311..20352 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1413 20312..20352 - |
| 1696845701.2944856-UTR-H-canaliculatus_F_contig1413:20311..20352 | 1696845701.2944856-UTR-H-canaliculatus_F_contig1413:20311..20352 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1413 20312..20352 - |
| 1622929163.3883176-UTR-H-canaliculatus_F_contig1413:20715..20755 | 1622929163.3883176-UTR-H-canaliculatus_F_contig1413:20715..20755 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1413 20716..20755 - |
| 1696845701.3044004-UTR-H-canaliculatus_F_contig1413:20715..20755 | 1696845701.3044004-UTR-H-canaliculatus_F_contig1413:20715..20755 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1413 20716..20755 - |
| 1622929163.620607-UTR-H-canaliculatus_F_contig1413:23761..24037 | 1622929163.620607-UTR-H-canaliculatus_F_contig1413:23761..24037 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1413 23762..24037 - |
| 1696845701.355484-UTR-H-canaliculatus_F_contig1413:23761..24037 | 1696845701.355484-UTR-H-canaliculatus_F_contig1413:23761..24037 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig1413 23762..24037 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929163.4928596-CDS-H-canaliculatus_F_contig1413:20755..20785 | 1622929163.4928596-CDS-H-canaliculatus_F_contig1413:20755..20785 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1413 20756..20785 - |
| 1696845701.3128054-CDS-H-canaliculatus_F_contig1413:20755..20785 | 1696845701.3128054-CDS-H-canaliculatus_F_contig1413:20755..20785 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1413 20756..20785 - |
| 1622929163.5706196-CDS-H-canaliculatus_F_contig1413:21178..21631 | 1622929163.5706196-CDS-H-canaliculatus_F_contig1413:21178..21631 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1413 21179..21631 - |
| 1696845701.3261683-CDS-H-canaliculatus_F_contig1413:21178..21631 | 1696845701.3261683-CDS-H-canaliculatus_F_contig1413:21178..21631 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1413 21179..21631 - |
| 1622929163.5856743-CDS-H-canaliculatus_F_contig1413:22066..22156 | 1622929163.5856743-CDS-H-canaliculatus_F_contig1413:22066..22156 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1413 22067..22156 - |
| 1696845701.3356-CDS-H-canaliculatus_F_contig1413:22066..22156 | 1696845701.3356-CDS-H-canaliculatus_F_contig1413:22066..22156 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1413 22067..22156 - |
| 1622929163.6070123-CDS-H-canaliculatus_F_contig1413:23713..23761 | 1622929163.6070123-CDS-H-canaliculatus_F_contig1413:23713..23761 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1413 23714..23761 - |
| 1696845701.3456724-CDS-H-canaliculatus_F_contig1413:23713..23761 | 1696845701.3456724-CDS-H-canaliculatus_F_contig1413:23713..23761 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig1413 23714..23761 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1413.3263.1 >prot_H-canaliculatus_F_contig1413.3263.1 ID=prot_H-canaliculatus_F_contig1413.3263.1|Name=mRNA_H-canaliculatus_F_contig1413.3263.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=207bp
MPDHPTKAGKHGGARKAPGARGRRGRKEGGGSGGSSTSEYSSGSESDGAG
GRRRRQQRRAGDRAAARRRSNSRTAGGARGRSNSNTPRVGAGGRRSRSNS
NTGRPGGAGGARSRSNSNTRRGDGAGGARSRSNSNTRRGDGAGGARSRSK
SRSNSRTPGGGGGGRRGGGHGHKKGNKKGRRKIGGGSGSGSDSDSDSGPS
TRLICG* back to topmRNA from alignment at H-canaliculatus_F_contig1413:20312..24037- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig1413.3263.1 ID=mRNA_H-canaliculatus_F_contig1413.3263.1|Name=mRNA_H-canaliculatus_F_contig1413.3263.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3726bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1413:20312..24037- (Hapterophycus canaliculatus Oshoro5f female)
AAGTAACAGTCCCGGGATGACGTCACCTTGGCTCCTCTGGGACGGTGGAG
AAACAGGAGAACGAGAAGACACACAACCCACAGGAAACAGAAAACTAAAA
CTCATGACACACAACCCTGGTGGTATCCTCGATTCCCCACTTCGACCACA
CCTAGATCCCTCGCTTCAGCGCGAACTACACCACCCGGACGGACATCCCT
AAAAGGACGGTTGCTGAATCACTCGAATTGTTCGCCAAGGGGAGAGGAGA
AGACAAATAGAAGACCGAGAGGCAAGATGCCCGATCATCCGACGAAAGCC
GGAAAGCACGGCGGGGCACGCAAGGTTTGACGATGTGTCCATTTCGCGAA
GAGAGAGAACCGGGACCTGAGGGGAAAGCGCGGGGCGTACTAGACGGGTG
TGCGGTGTGCATTAGTAGCTGCAGTGCCGAGTCTTTACCGTCCGGGCCTA
CAAATGTCTGGCCCGCTCTTGTAGTTTAATGGGGCAAGAGTGTCAACCAA
CTGCAGCTGCTGTAGAAAATCGCTAGAAATGCAGGAGGACGAAAAGTCTT
TAGTCGAGAGTCTTCCCACCTACTGTAGAGAACGCTTGTTTTTCGAGTCT
CGGTGTTTCCTCGAGCGCCTTGTCCCTTGTCGTGTAATGTCACGAACCTG
CCGATGGACAAATCCTCGCCACGTGAAGTTAGACCAGTGCCAGCTGGACG
TGGCTCTCGAGTCGGTCGTCAAGGGCGCCGTCTCGCTGGGAATCAGGATC
GAGTGTCGGTCCTCGTGCTGGAGGAGAAACCTAGACACAGCACAGCACAG
CAGTCAGGAGACGAGAATCCGGTCCCTCAGCAACCCTCCTTGCGCACCAC
GACGGATGCCGGGGCAGGGTCGTCAACGAAGACGAAGGGGTTTCGCTGCA
CAGCAGCTGGGTAGAAGACATTTTAGGAAGAGCGTCCTTGGGAATCTCTA
TAGGCGTCACATGTACAAGTACAAGTACAAGTACAAGCGATCACCGTTGT
CGGTATTCCCGTCCTTCGGCGCGTTGGAGCCTCGCCACGAGGGATTCAAC
GGCATGTACTGTACAGAAGTGCCATCCCGAATCCTTTGCCTAAGCTCGTA
AACCCCCCCCATTTGTTTTAAGAGCTTAGAGCCCGTGTTCATAAAAAAGG
ACACCAGCGCCGCGGATGGTTCTGTTGTGATCGGAATGTTCCGTTCCGAA
GAAACGAAGAATACTCGTAACAGTTTCCGATAGAGTTTACTTGTTGCGGT
GCTGACGGCCAGGGGCGTAACAAAGCAGGGCCTGCTGTTGCAAAAGAAAG
CTTCTCTTACTCTGTACGTTCCGCAAGCTGGTCCATGGCTCCAACCAAAC
CGCCGAAAATCCATTAGAAACAAGTCGTGCTTCATGCTGACGAAAGTACT
GCTGGAACCTGGTCCGACGCCCCAGGTCCCCCACCTTTGCTCTCCGCGGT
AACGACAATCGCGAGATTTGTGTTGCTTGCTACTACGCGTGAAGGATCAA
GCAAACCGTACCATACATGTTCTCCTGCCTCTCGTATCGACGAAAGCCGT
AACGCCATGTAGAGCCTTGGATGTAAAAAGAGGCCCCATTTTTGGATTGA
CTATCGAAACGAAACAAGTGCCCAGGGATGATACGACCTGTTGTGTGAGC
ATCCTAAATCCTACTTCAACAGCCCGCTGAGAATGCCGAAACTCCGCGGC
AATGGGAACTGGTGCACAGCAACGGCGATGATCTCGGAGTGCTCGATATC
ACATGAATTCAGATTAAAGTTGCCAAGACATAGCCACTGAAACAAATGTC
AGGGGCTGGGTAGAAGACGTTTGCACGATCAGCATGAACGCGAAATGACA
CTCACATAACGCTGCTGCCGACACTGCACAGGCACCGGGAGCACGGGGAC
GACGTGGCCGCAAGGAAGGCGGTGGCAGCGGCGGAAGCAGCACCAGCGAA
TACAGCAGCGGCAGCGAATCTGTGAGTGCGTGGGGTGGTCGCTTGACCAA
GGCGTCGAAGCCGGTTTCACAAACGAGCGACGTTTGTCCATTACCCGGAC
CTAGCGCCGTACACGTGCCGGGCATGCCTTCTCTCCCGTGTGTGATGACG
GGCGCGATAGCCGTGCTTTGTCCTGCTCTTCGATGAGGTGTCAGTGGGTT
CTTTTTTCGAAGATCAACCATTTCCTTGTTGAGATGGCATCGCCAACAAG
CCTGGGATTCCTCCCTCGATGGTTGATTCGTGCGAGATGGCGAGATACGA
GGAAGTCCACCAGAGGGTGGCGGTCTCGTAGACGGCTGTGGGCAGAAACG
CGAGCGATTCGGGCGAAAACAGTGCACCGCTGTCACGGTCACCAGCAGCG
ATCGAACGGTGTTCCCTCCCCATGAAACGAAACGCTTGGCACGCGCGCAC
GTACAGGACGGGGCTGGCGGAAGGCGCAGGCGACAGCAACGCCGCGCCGG
CGACAGGGCTGCAGCCCGCCGACGCAGCAACAGCCGCACGGCCGGCGGCG
CGCGAGGCCGCAGCAACAGCAACACTCCACGAGTCGGCGCCGGCGGCCGA
CGTAGCCGCAGCAACAGCAACACTGGTCGCCCCGGCGGCGCTGGCGGCGC
AAGGAGCCGCAGCAACAGCAACACTCGTCGGGGTGATGGCGCCGGCGGCG
CAAGGAGCCGCAGCAACAGCAACACTCGTCGGGGTGATGGCGCCGGCGGC
GCGAGAAGCCGCAGCAAAAGCCGCAGCAATAGCCGTACCCCTGGCGGCGG
CGGCGGCGGACGTCGCGGCGGTGGGCACGGGCACAAGAAGGGCAACAAAA
AAGGGAGGAGGAAGATCGGCGGCGGCAGCGGCAGCGGCAGCGACAGCGAC
AGCGACTCGGTGAGCCTCGCTCGACCCTCCCCTCTGCGTGACCTCGTTCT
TTCTGGCGCCCGTGACCCTTCGGGCCCTCTTCGCTGTCCTCCCTGACCCT
TCCTTTCGAACGAGAGCGGCAGCATGGCATTCGAATCGCTCCTTCTTGGC
CGAAAGGCGGGCTTGAGACCAGCGTTAGTGATAGTCGTAGAGGTTGCGGC
GTGACTTCCCCCCGGACCGTCTGCCGTTGGTCCGGTTGTCTGCCCCTGCC
GGATTGCTGGTGCTTGTCCGTTGCCGGAAGGGGAAAGGTCACGGTCGTTT
TGAGTTGCAGCGTGCCTCATTCGCCTGCTTGCGTTCGCCCAGCACGCTCA
TCTGTTCTCCGCATGAACTGCCGCGTCGACACGCCCGCTGTCCGCCGACC
AGGGCCCGAGCACGCGGCTGATCTGTGGTTAGGATTTGTGTTGACGGGGT
GGAACTGTGATGCCTTCATTGGGTGAGGGTTTGGGTTATACGGGTGTTTG
TCGCCAGCCTCCGATAGAGGTGGACGCACTCGCGAACGGTTCGCGTTCTC
GTGGTCGGGGCTAAACGTAGGGTCAGGGCAGCACCAGCAGGCAAGAAAAG
CAGACCCACACCCCCACACCTCCGCCTCGTCCTCTGTGGGACCGTGACTG
TTCGTGATGACGTGCCGTGTTGCTTCTTAGGAGAAGGCCAGACAGGTGTG
AAACGCTCTTTCATCGACAACCTTTTTTTGTCGACGGCGTTTGTCTTGAC
GGTGCACACGGCCGTGCATGCCCGGCATACCCCCCTCGCGCCGCACCCCC
CCCATTACCCTTGTAAACTTGTTTCTTTCTCGCAGTCTTCTTCTTCTTCT
TCTTCTTCCTCATCTTCTTCTGGCGG back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig1413:20312..24037- >mRNA_H-canaliculatus_F_contig1413.3263.1 ID=mRNA_H-canaliculatus_F_contig1413.3263.1|Name=mRNA_H-canaliculatus_F_contig1413.3263.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1242bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1413:20312..24037- (Hapterophycus canaliculatus Oshoro5f female)
ATGCCCGATCATCCGACGAAAGCCGGAAAGCACGGCGGGGCACGCAAGAT
GCCCGATCATCCGACGAAAGCCGGAAAGCACGGCGGGGCACGCAAGGCAC
CGGGAGCACGGGGACGACGTGGCCGCAAGGAAGGCGGTGGCAGCGGCGGA
AGCAGCACCAGCGAATACAGCAGCGGCAGCGAATCTGCACCGGGAGCACG
GGGACGACGTGGCCGCAAGGAAGGCGGTGGCAGCGGCGGAAGCAGCACCA
GCGAATACAGCAGCGGCAGCGAATCTGACGGGGCTGGCGGAAGGCGCAGG
CGACAGCAACGCCGCGCCGGCGACAGGGCTGCAGCCCGCCGACGCAGCAA
CAGCCGCACGGCCGGCGGCGCGCGAGGCCGCAGCAACAGCAACACTCCAC
GAGTCGGCGCCGGCGGCCGACGTAGCCGCAGCAACAGCAACACTGGTCGC
CCCGGCGGCGCTGGCGGCGCAAGGAGCCGCAGCAACAGCAACACTCGTCG
GGGTGATGGCGCCGGCGGCGCAAGGAGCCGCAGCAACAGCAACACTCGTC
GGGGTGATGGCGCCGGCGGCGCGAGAAGCCGCAGCAAAAGCCGCAGCAAT
AGCCGTACCCCTGGCGGCGGCGGCGGCGGACGTCGCGGCGGTGGGCACGG
GCACAAGAAGGGCAACAAAAAAGGGAGGAGGAAGATCGGCGGCGGCAGCG
GCAGCGGCAGCGACAGCGACAGCGACTCGGACGGGGCTGGCGGAAGGCGC
AGGCGACAGCAACGCCGCGCCGGCGACAGGGCTGCAGCCCGCCGACGCAG
CAACAGCCGCACGGCCGGCGGCGCGCGAGGCCGCAGCAACAGCAACACTC
CACGAGTCGGCGCCGGCGGCCGACGTAGCCGCAGCAACAGCAACACTGGT
CGCCCCGGCGGCGCTGGCGGCGCAAGGAGCCGCAGCAACAGCAACACTCG
TCGGGGTGATGGCGCCGGCGGCGCAAGGAGCCGCAGCAACAGCAACACTC
GTCGGGGTGATGGCGCCGGCGGCGCGAGAAGCCGCAGCAAAAGCCGCAGC
AATAGCCGTACCCCTGGCGGCGGCGGCGGCGGACGTCGCGGCGGTGGGCA
CGGGCACAAGAAGGGCAACAAAAAAGGGAGGAGGAAGATCGGCGGCGGCA
GCGGCAGCGGCAGCGACAGCGACAGCGACTCGGGCCCGAGCACGCGGCTG
ATCTGTGGTTAGGGCCCGAGCACGCGGCTGATCTGTGGTTAG back to top
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