mRNA_H-canaliculatus_F_contig14119.3257.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14119.3257.1 vs. uniprot
Match: A0A6H5L594_9PHAE (Ribosomal_L23eN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L594_9PHAE) HSP 1 Score: 176 bits (445), Expect = 2.490e-49 Identity = 90/99 (90.91%), Postives = 93/99 (93.94%), Query Frame = 2
Query: 368 PNHPTPAPPQEPVMNKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALEIANKIGII 664
P +P A P+ P MNKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALE+ANKIGII
Sbjct: 46 PKYPAKAVPRSPQMNKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALEVANKIGII 144
BLAST of mRNA_H-canaliculatus_F_contig14119.3257.1 vs. uniprot
Match: A0A835Z6Z2_9STRA (Ribosomal protein L23/L15e core domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Z2_9STRA) HSP 1 Score: 148 bits (374), Expect = 5.890e-39 Identity = 76/99 (76.77%), Postives = 86/99 (86.87%), Query Frame = 2
Query: 368 PNHPTPAPPQEPVMNKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALEIANKIGII 664
P + + P +P M+K RIIK+PLTTESAMKKIEDNNTLVFIVDVK+NKRQIK AV+ALY+I Q VNTLIRPDG KKAYVRLTQD+DALE+ANKIGII
Sbjct: 50 PKYALKSTPSQPKMDKFRIIKYPLTTESAMKKIEDNNTLVFIVDVKANKRQIKAAVRALYEISCQKVNTLIRPDGLKKAYVRLTQDYDALEVANKIGII 148
BLAST of mRNA_H-canaliculatus_F_contig14119.3257.1 vs. uniprot
Match: A0A6U1J6R7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6U1J6R7_9STRA) HSP 1 Score: 144 bits (363), Expect = 1.760e-37 Identity = 72/99 (72.73%), Postives = 85/99 (85.86%), Query Frame = 2
Query: 368 PNHPTPAPPQEPVMNKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALEIANKIGII 664
P + A P M+K+R+IK+PLTTESAMKKIEDNNTLVFIVDV +NKRQIKDAVKA+Y+I VNTLIRPDG+KKAYVRLTQD+DAL++AN+IGII
Sbjct: 42 PKYALKAAPARAKMDKYRVIKYPLTTESAMKKIEDNNTLVFIVDVAANKRQIKDAVKAMYEISCSKVNTLIRPDGQKKAYVRLTQDYDALDVANRIGII 140
BLAST of mRNA_H-canaliculatus_F_contig14119.3257.1 vs. uniprot
Match: A0A7S2STG4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STG4_9STRA) HSP 1 Score: 143 bits (360), Expect = 7.740e-37 Identity = 70/86 (81.40%), Postives = 81/86 (94.19%), Query Frame = 2
Query: 407 MNKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALEIANKIGII 664
M+KHRIIK+PLTTESAMKKIEDNNTLVFIVDV +NKRQIKDAV ++DI+ Q VNTLIRPDG+KKAYVRLTQD+DAL++AN+IGII
Sbjct: 71 MDKHRIIKYPLTTESAMKKIEDNNTLVFIVDVTANKRQIKDAVSQMHDIQCQKVNTLIRPDGQKKAYVRLTQDYDALDVANRIGII 156
BLAST of mRNA_H-canaliculatus_F_contig14119.3257.1 vs. uniprot
Match: A0A0D0DQK3_9AGAM (Ribosomal_L23eN domain-containing protein n=2 Tax=Paxillus TaxID=5395 RepID=A0A0D0DQK3_9AGAM) HSP 1 Score: 142 bits (359), Expect = 1.180e-36 Identity = 74/122 (60.66%), Postives = 89/122 (72.95%), Query Frame = 2
Query: 299 HRPLPSRFAQTDGRLVAASILLVPNHPTPAPPQEPVMNKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALEIANKIGII 664
H P +RF+ T R + P +P + P P M++ R I PL TESAMKKIE++NTLVFIVD+KSNKRQIKDAVK LYD++S +NTLIRPDGKKKAYVRL D DAL++ANKIG I
Sbjct: 38 HSPRKTRFSVTFRRPKTLKLSRKPKYPRKSIPHAPRMDEFRTIMSPLNTESAMKKIEEHNTLVFIVDIKSNKRQIKDAVKKLYDVQSAKINTLIRPDGKKKAYVRLAADHDALDVANKIGFI 159
BLAST of mRNA_H-canaliculatus_F_contig14119.3257.1 vs. uniprot
Match: A0A1D2A5C7_AUXPR (Ribosomal_L23eN domain-containing protein n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2A5C7_AUXPR) HSP 1 Score: 141 bits (355), Expect = 2.720e-36 Identity = 73/126 (57.94%), Postives = 93/126 (73.81%), Query Frame = 2
Query: 287 WQREHRPLPSRFAQTDGRLVAASILLVPNHPTPAPPQEPVMNKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALEIANKIGII 664
W++ +P S LV P +P + P + ++ +IK+PLTTESAMKKIEDNNTLVFIVD++SNKRQI+DAV LYDI+++ +NTLIRPDG+KKAYVRLT DFDAL++ANKIGII
Sbjct: 21 WKKTRKPRYSTSFHRPKTLVRTRD---PKYPRVSAPGQQKLDSFAVIKYPLTTESAMKKIEDNNTLVFIVDIRSNKRQIRDAVARLYDIQTRKINTLIRPDGEKKAYVRLTPDFDALDVANKIGII 143
BLAST of mRNA_H-canaliculatus_F_contig14119.3257.1 vs. uniprot
Match: F0YN25_AURAN (60S ribosomal protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN25_AURAN) HSP 1 Score: 139 bits (349), Expect = 3.470e-36 Identity = 68/86 (79.07%), Postives = 80/86 (93.02%), Query Frame = 2
Query: 407 MNKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALEIANKIGII 664
M+K+R+IK+PLTTESAMKKIEDNNTLVFIVDV +NKRQIKDAVK +Y+I VNTLIRPDG+KKAYVRLTQD+DAL++AN+IGII
Sbjct: 1 MDKYRVIKYPLTTESAMKKIEDNNTLVFIVDVLANKRQIKDAVKQMYEIACAKVNTLIRPDGQKKAYVRLTQDYDALDVANRIGII 86
BLAST of mRNA_H-canaliculatus_F_contig14119.3257.1 vs. uniprot
Match: Q66KX3_XENLA (60S ribosomal protein L23a n=9 Tax=Anura TaxID=8342 RepID=Q66KX3_XENLA) HSP 1 Score: 141 bits (355), Expect = 3.910e-36 Identity = 75/122 (61.48%), Postives = 89/122 (72.95%), Query Frame = 2
Query: 299 HRPLPSRFAQTDGRLVAASILLVPNHPTPAPPQEPVMNKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALEIANKIGII 664
H+ R + T R + P +P + P ++ + IIKFPLTTESAMKKIEDNNTLVFIVDVK+NK QIK AVK LYDI+ Q VNTLIRPDG+KKAYVRL D+DAL++ANKIGII
Sbjct: 34 HKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPTRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKQLYDIDVQKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 155
BLAST of mRNA_H-canaliculatus_F_contig14119.3257.1 vs. uniprot
Match: A0A2D0SYG5_ICTPU (60S ribosomal protein L23a n=12 Tax=Clupeocephala TaxID=186625 RepID=A0A2D0SYG5_ICTPU) HSP 1 Score: 140 bits (353), Expect = 7.560e-36 Identity = 75/122 (61.48%), Postives = 89/122 (72.95%), Query Frame = 2
Query: 299 HRPLPSRFAQTDGRLVAASILLVPNHPTPAPPQEPVMNKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALEIANKIGII 664
HR R + T R + P +P + P+ ++ + IIKFPLTTESAMKKIEDNNTLVFIVDVK+NK QIK AVK LYDI+ VNTLIRPDG+KKAYVRL D+DAL++ANKIGII
Sbjct: 34 HRKKKVRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKHAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 155
BLAST of mRNA_H-canaliculatus_F_contig14119.3257.1 vs. uniprot
Match: A0A3B3STK6_9TELE (Ribosomal protein L23a n=2 Tax=Osteoglossocephalai TaxID=1489341 RepID=A0A3B3STK6_9TELE) HSP 1 Score: 140 bits (353), Expect = 7.560e-36 Identity = 75/122 (61.48%), Postives = 89/122 (72.95%), Query Frame = 2
Query: 299 HRPLPSRFAQTDGRLVAASILLVPNHPTPAPPQEPVMNKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALEIANKIGII 664
HR R + T R + P +P + P ++ + IIKFPLTTESAMKKIEDNNTLVFIVDVK+NK QIK+AVK LYDI+ VNTLIRPDG+KKAYVRL D+DAL++ANKIGII
Sbjct: 34 HRRKKIRTSPTFRRPKTQRLRRQPKYPRKSAPHRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKNAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGII 155 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14119.3257.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14119.3257.1 >prot_H-canaliculatus_F_contig14119.3257.1 ID=prot_H-canaliculatus_F_contig14119.3257.1|Name=mRNA_H-canaliculatus_F_contig14119.3257.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=87bp MNKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIEback to top mRNA from alignment at H-canaliculatus_F_contig14119:92..2318+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14119.3257.1 ID=mRNA_H-canaliculatus_F_contig14119.3257.1|Name=mRNA_H-canaliculatus_F_contig14119.3257.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2227bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14119:92..2318+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14119:92..2318+ >mRNA_H-canaliculatus_F_contig14119.3257.1 ID=mRNA_H-canaliculatus_F_contig14119.3257.1|Name=mRNA_H-canaliculatus_F_contig14119.3257.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=522bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14119:92..2318+ (Hapterophycus canaliculatus Oshoro5f female)back to top |