mRNA_H-canaliculatus_F_contig141.3242.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig141.3242.1
Unique NamemRNA_H-canaliculatus_F_contig141.3242.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig141.3242.1 vs. uniprot
Match: D8LQ88_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ88_ECTSI)

HSP 1 Score: 213 bits (541), Expect = 1.770e-63
Identity = 109/169 (64.50%), Postives = 126/169 (74.56%), Query Frame = 1 
Query:  103 TSSRGGCWSPLIEEQSGCQTCIVQDSGSSAISDDAASSGTTQQQPNQWASSVFSTFFELELDPCPEAVADIYGTPEGGILPFEEVQSADCVGDNDDQDGGEN----WFAFEASCYAKSSFLDSASNWEDADARCRDMDARLVSLESEDENDFVTFNLLWIGFLGEAYTG 597
            T+SRGGCWS LIEEQSGCQTCIVQ + SS  + D           +QW SSVFS FFE+ELDPCPE+V+D YGTP GG++ ++EV SADC   +DD          W AFE SCY+KSS+LD+A NWEDADARC ++ ARLVSLESE ENDFVT NLLWIGFLGEAYTG
Sbjct:    2 TTSRGGCWSTLIEEQSGCQTCIVQATSSSTTATD-------DPPASQWNSSVFSKFFEMELDPCPESVSDFYGTPPGGVVSYQEVLSADCRHSDDDNXXXXXXDSVWLAFENSCYSKSSYLDAAVNWEDADARCGEVGARLVSLESEAENDFVTHNLLWIGFLGEAYTG 163
[Close]
BLAST of mRNA_H-canaliculatus_F_contig141.3242.1 vs. uniprot
Match: D8LHR0_ECTSI (C-type lectin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHR0_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 1.850e-38
Identity = 106/309 (34.30%), Postives = 145/309 (46.93%), Query Frame = 1 
Query:   58 RGKGAFFSGCISRSTTSSRGGCWSP------LIEEQSGCQTCIVQDSGSSAISDDAASSGTTQQQPNQWASSVFSTFFELELDPCPEAV--ADIYGTPEGGI--LPFEEVQSADCVGDNDDQDGGENWFAFE--ASCYAKSSFLDSASNWEDADARCRDMDARLVSLESEDENDFVTFNLLWIGFLGEAYTGLQKLSADGTWSWRDSLADFPPGVFDANTSFQYWDEGLDASSSYESSGA---SCLEILPYAPKAWNPFSCEVNKQYVCEKPAQP--------TPFLADEMPQPPTVTSSPSMPGGSGG 915
            RGKGAF SGC++ S  S  GGCW+        IEE  GCQTC +Q+                    + ++ +VF   F  ELDPCP+ +    +Y    GG+  +    + S  C          E W  FE   +CY KS     A N  DA + C +  A +++++SE ENDF+  N+L+ GF GE YTG+ K S    W W    +D     ++    +  W EG +   +    G    SC+EI PY PK WNPFSC+V K YVCE PA          +P      P+PP  T+   + GG  G
Sbjct:    6 RGKGAFLSGCVTLSDESYLGGCWTQDDDFGERIEETDGCQTCTIQE--------------------DAFSEAVFPIMFPAELDPCPDDLDYTALYEGTYGGLSLVTAASLSSTGCP---------EGWLYFEDTGNCYFKSPNTAKAENQADAVSICEEEGAWVIAIDSEAENDFLLHNMLFTGFFGETYTGMTKESPSDEWEWPAESSDT---AYNCVGDYSDWLEGAEIGCAAVFDGGEDGSCMEIFPYEPKGWNPFSCDVGKHYVCEMPATAGGEETGTASPGGCYNNPRPPPPTAKRDLFGGDAG 282
[Close]
BLAST of mRNA_H-canaliculatus_F_contig141.3242.1 vs. uniprot
Match: A0A383WIY0_TETOB (C-type lectin domain-containing protein n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WIY0_TETOB)

HSP 1 Score: 96.7 bits (239), Expect = 2.100e-17
Identity = 82/296 (27.70%), Postives = 126/296 (42.57%), Query Frame = 1 
Query:   25 CASLVPIEDRRRGKGAFFSGCISRSTTSSRGGCWSPLIEEQSGCQTCIVQDSGSSAISDDAASSGTTQQQPNQWASSVFSTFFELELDPCPEAVADIY------GTPEGGILPFEEVQSADCVGDNDDQDGGENWFAFEAS--CYAKSSFLDS-ASNWEDADARCRDMDA--RLVSLESEDENDFVTFNLLWIGFLGEAYTGLQKLSA-----DGTWSWRDSLADFPPGVFDANT--------SFQYWDEGLDASSSYESSGASCLEILPYAPKAWNPFSCEVNKQYVCEK-PAQP 837
            C +L+  E+  RG G F+      ST +S  G W  +    + C+TCI                         W ++  + F   +L  CP  V   Y            ++P     + +         G   W    A+  CY KSS     +S +++A  RC  + A   ++++    E++FV  NLL++G  GE YTGL+KL +     D  W W  + +     +    +        +F Y   G+    SY  +G  C+EILP  PK WNPF+C+V KQY+CE+ P QP
Sbjct:   26 CPALMAEEEVIRGFGTFYD-----STCASAAGDWGGV----NCCRTCI-------------------------WHNTSVAQFASDDLPACPPCVRQYYEAAFRLANASLNVVPLTAYLNPEKC-----PFGANGWLYNPANDRCYYKSSGRRGISSGFDNAVMRCNTLHAGASMININDAQEDEFVRLNLLYVGTFGETYTGLKKLGSSDPAFDNQWYWLQNASQLTAPLASVGSRLLPTSYNNFNYPGRGI----SYSEAGPLCMEILPQKPKFWNPFACDVIKQYLCERAPVQP 278
[Close]
BLAST of mRNA_H-canaliculatus_F_contig141.3242.1 vs. uniprot
Match: A0A7J7Q9X4_9CHLO (C-type lectin domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q9X4_9CHLO)

HSP 1 Score: 71.6 bits (174), Expect = 1.790e-9
Identity = 62/175 (35.43%), Postives = 82/175 (46.86%), Query Frame = 1 
Query:  430 CYAKSSFLDSAS-NWEDADARCRDMDA--RLVSLESEDENDFVTFNLLWIGFLGEAYT----------GLQKLSADGTWSWRDSLADFPPGVFDANTSFQYWDEGLDASSSYESSGASCLEILPYAPKAWNPFSCEVNKQYVCEKP-AQP-TPFLADEMPQPPTVTSSPSMPGGS 909
            CY KSS+    S    DA  RC  + A   ++++    E +FV  NLL+ GF GE YT          GLQ   A   W+  +S+A       +    F Y++           S   C+EILP  PK +NPFSC V KQY+CE+  AQP   F     PQ P  T  P+ P G+
Sbjct:  111 CYYKSSYDRGISAGITDAINRCFTLHAGASILNIADAQEEEFVRLNLLYAGFFGETYTSCICPSATARGLQLPQA--AWARPESVATDYHNFNEPGRGFDYYE-----------SEVVCMEILPNKPKYYNPFSCAVLKQYICERSVAQPGETFGPGPTPQLP-CTGPPAAPAGA 271
[Close]
BLAST of mRNA_H-canaliculatus_F_contig141.3242.1 vs. uniprot
Match: A0A3B3BIT5_ORYME (C-type lectin domain-containing protein n=1 Tax=Oryzias melastigma TaxID=30732 RepID=A0A3B3BIT5_ORYME)

HSP 1 Score: 65.5 bits (158), Expect = 6.410e-9
Identity = 45/143 (31.47%), Postives = 65/143 (45.45%), Query Frame = 1 
Query:  400 GENWFAFEASCYAKSSFLDSASNWEDADARCRDMDARLVSLESEDENDFVTFNLLWIGFLGEAYTGLQKLSADGTWSWRDSLADFPPGVFDANTSFQYWDEGLDASSSYESSGASCLEILPYAPKAWNPFSCEVNKQYVCEKP 828
            G +W+ F   CY    F D  + W+DA ++CRD+ A LVS+ S  E  +V   L         +TGL  L   G ++W D          D   +F YW  G    +++      C+E+L Y    WN  SC     Y+C+KP
Sbjct:   16 GPDWYEFGEFCYKP--FGDKRT-WQDAQSKCRDLGAELVSIMSMKEQSWVESYLYMA--TNNLWTGLNDLLVPGMFTWSD----------DFEVTFTYWAPGEP--NNHNGFSEDCVEML-YQSGRWNDKSCSELNNYICKKP 140
[Close]
BLAST of mRNA_H-canaliculatus_F_contig141.3242.1 vs. uniprot
Match: A0A8I6A230_RAT (Similar to CD209a antigen n=2 Tax=Rattus norvegicus TaxID=10116 RepID=A0A8I6A230_RAT)

HSP 1 Score: 63.9 bits (154), Expect = 1.390e-8
Identity = 43/141 (30.50%), Postives = 66/141 (46.81%), Query Frame = 1 
Query:  409 WFAFEASCYAKSSFLDSASNWEDADARCRDMDARLVSLESEDENDFVTFNLLWIGFLGEAYTGLQKLSADGTWSWRDSLADFPPGVFDANTSFQ-YWDEGLDASSSYESSGASCLEILPYAPKAWNPFSCEVNKQYVCEKP 828
            W  F   CY    F  S  NW D+ A C+++DA+LV++ES++E  F+     ++   G A+ GL  L  + TW W D            + SF+ YW +G   +   E     C E+       WN   C+  K ++C+KP
Sbjct:   18 WTFFHGRCYY---FSKSQRNWNDSVAACQEVDAQLVTVESDEEQTFLD---TFLKNKGPAWMGLSDLKQESTWQWVDGSP--------LSDSFRKYWIKGEPNNQGNED----CAELRE---DGWNDNKCDNKKFWICKKP 137
[Close]
BLAST of mRNA_H-canaliculatus_F_contig141.3242.1 vs. uniprot
Match: A0A822IMK1_9NEOB ((mimic poison frog) hypothetical protein n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A822IMK1_9NEOB)

HSP 1 Score: 63.9 bits (154), Expect = 1.660e-8
Identity = 43/141 (30.50%), Postives = 66/141 (46.81%), Query Frame = 1 
Query:  409 WFAFEASCYAKSSFLDSASNWEDADARCRDMDARLVSLESEDENDFVTFNLLWIGFLGEAYTGLQKLSADGTWSWRDSLADFPPGVFDANTSFQ-YWDEGLDASSSYESSGASCLEILPYAPKAWNPFSCEVNKQYVCEKP 828
            W  F   CY    F  S  NW D+ A C+++DA+LV++ES++E  F+     ++   G A+ GL  L  + TW W D            + SF+ YW +G   +   E     C E+       WN   C+  K ++C+KP
Sbjct:   26 WTFFHGRCYY---FSKSQRNWNDSVAACQEVDAQLVTVESDEEQTFLD---TFLKNKGPAWMGLSDLKQESTWQWVDGSP--------LSDSFRKYWIKGEPNNQGNED----CAELRE---DGWNDNKCDNKKFWICKKP 145
[Close]
BLAST of mRNA_H-canaliculatus_F_contig141.3242.1 vs. uniprot
Match: A0A3P8RID6_AMPPE (C-type lectin domain-containing protein n=2 Tax=Amphiprion percula TaxID=161767 RepID=A0A3P8RID6_AMPPE)

HSP 1 Score: 62.0 bits (149), Expect = 9.570e-8
Identity = 49/176 (27.84%), Postives = 76/176 (43.18%), Query Frame = 1 
Query:  334 GILPFEEVQSADCVGDNDDQDGGENWFAFEASCYAKSSFLDSASNWEDADARCRDMDARLVSLESEDENDFVTFN-LLWIGFLGEA------YTGLQKLSADGTWSWRDSLADFPPGVFDANTSFQYWDEGLDASSSYESSGASCLEILPYAPKAWNPFSCEVNKQYVCEK-PAQP 837
            G+   EE+Q  D             W  F+ SCY    F D    W DA+ RCRD++A LVS+ + +E DF   N +L  GF+  A      + GL   + +  + W D             T  QY +   +   +Y +SG  C+ ++ +    WN   C  +  + C+K P +P
Sbjct:   10 GVAATEELQCED------------GWTQFQGSCYLH--FAD-RETWLDAEQRCRDLNAHLVSIITPEEQDFKKENSILSTGFVSTANAQDYQWIGLNDKTVENDFRWTDG------------TPMQYDNWRPNQPDNYFNSGEDCVVMIWHENGQWNDVPCNYHLPFTCKKGPGKP 158
[Close]
BLAST of mRNA_H-canaliculatus_F_contig141.3242.1 vs. uniprot
Match: A0A437CSQ7_ORYJA (Uncharacterized protein n=3 Tax=Oryzias TaxID=8089 RepID=A0A437CSQ7_ORYJA)

HSP 1 Score: 66.2 bits (160), Expect = 1.140e-7
Identity = 45/143 (31.47%), Postives = 65/143 (45.45%), Query Frame = 1 
Query:  400 GENWFAFEASCYAKSSFLDSASNWEDADARCRDMDARLVSLESEDENDFVTFNLLWIGFLGEAYTGLQKLSADGTWSWRDSLADFPPGVFDANTSFQYWDEGLDASSSYESSGASCLEILPYAPKAWNPFSCEVNKQYVCEKP 828
            G +WF F   CY    F D  + W+DA ++CRD+ A LVS+ S  E  +V   L         +TGL  L   G ++W D+             +F YW  G    +++      C+E+L Y    WN  SC     Y+C+KP
Sbjct: 1080 GPDWFEFGEFCYKP--FGDKRT-WQDAQSKCRDLGAELVSIMSMKEQSWVESYLYMA--TNNLWTGLNDLLVPGMFTWSDNF----------EVTFTYWAPGEP--NNHNGFSEDCVEML-YETGRWNDKSCSELNNYICKKP 1204
[Close]
BLAST of mRNA_H-canaliculatus_F_contig141.3242.1 vs. uniprot
Match: A0A1S3GJT0_DIPOR (uncharacterized protein LOC105998721 n=1 Tax=Dipodomys ordii TaxID=10020 RepID=A0A1S3GJT0_DIPOR)

HSP 1 Score: 64.7 bits (156), Expect = 1.910e-7
Identity = 40/144 (27.78%), Postives = 72/144 (50.00%), Query Frame = 1 
Query:  406 NWFAFEASCYAKSSFLDSASNWEDADARCRDMDARLVSLESEDENDFVTFNLLWIGFLGEAYTGLQKLSADGTWSWRDSLADFPPGVFDANTSFQYWDEGLDASSSYESSGASCLEILPYAPKAWNPFSCEVNKQYVCEKPAQP 837
            +W +F+  CY  S+   S  NW D+   C++++A+LVS+ES++E  F+       G+    + GL  L+ +  W W D       G   +N   +YW++G   ++     G  C+E   +  + WN  +C+  K ++C+K   P
Sbjct:  161 DWISFQGHCYFLSN---SQRNWHDSVTACQEVEAQLVSIESDEEQSFLQQTSKKKGY---TWMGLSDLNQEAAWVWVD-------GSPLSNRLKKYWNKGQPNNNG----GQDCVE---FRGEGWNDSNCDNKKFWICKKSLSP 284
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig141.3242.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ88_ECTSI1.770e-6364.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LHR0_ECTSI1.850e-3834.30C-type lectin domain-containing protein n=1 Tax=Ec... [more]
A0A383WIY0_TETOB2.100e-1727.70C-type lectin domain-containing protein n=2 Tax=Te... [more]
A0A7J7Q9X4_9CHLO1.790e-935.43C-type lectin domain-containing protein n=1 Tax=Sc... [more]
A0A3B3BIT5_ORYME6.410e-931.47C-type lectin domain-containing protein n=1 Tax=Or... [more]
A0A8I6A230_RAT1.390e-830.50Similar to CD209a antigen n=2 Tax=Rattus norvegicu... [more]
A0A822IMK1_9NEOB1.660e-830.50(mimic poison frog) hypothetical protein n=1 Tax=R... [more]
A0A3P8RID6_AMPPE9.570e-827.84C-type lectin domain-containing protein n=2 Tax=Am... [more]
A0A437CSQ7_ORYJA1.140e-731.47Uncharacterized protein n=3 Tax=Oryzias TaxID=8089... [more]
A0A1S3GJT0_DIPOR1.910e-727.78uncharacterized protein LOC105998721 n=1 Tax=Dipod... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig141contigH-canaliculatus_F_contig141:27118..32650 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score74.3
Seed ortholog evalue1.8e-10
Seed eggNOG ortholog69293.ENSGACP00000016706
KEGG koko:K06560,ko:K17513
KEGG Pathwayko04145,ko05152,map04145,map05152
EggNOG free text desc.C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
EggNOG OGs39XBZ@33154,3BGTA@33208,3CZ67@33213,488BW@7711,49KVI@7742,4A9I0@7898,KOG4297@1,KOG4297@2759
COG Functional cat.TV
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04090,ko04091,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionC-type lectin fold
Ec32 orthologEc-26_005740.1
Exons9
Model size1488
Cds size1488
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929161.031354-CDS-H-canaliculatus_F_contig141:27117..272321622929161.031354-CDS-H-canaliculatus_F_contig141:27117..27232Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig141 27118..27232 -
1696845700.152927-CDS-H-canaliculatus_F_contig141:27117..272321696845700.152927-CDS-H-canaliculatus_F_contig141:27117..27232Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig141 27118..27232 -
1622929161.0507112-CDS-H-canaliculatus_F_contig141:27634..278351622929161.0507112-CDS-H-canaliculatus_F_contig141:27634..27835Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig141 27635..27835 -
1696845700.167682-CDS-H-canaliculatus_F_contig141:27634..278351696845700.167682-CDS-H-canaliculatus_F_contig141:27634..27835Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig141 27635..27835 -
1622929161.0699508-CDS-H-canaliculatus_F_contig141:28320..284101622929161.0699508-CDS-H-canaliculatus_F_contig141:28320..28410Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig141 28321..28410 -
1696845700.1772969-CDS-H-canaliculatus_F_contig141:28320..284101696845700.1772969-CDS-H-canaliculatus_F_contig141:28320..28410Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig141 28321..28410 -
1622929161.0822494-CDS-H-canaliculatus_F_contig141:28470..287161622929161.0822494-CDS-H-canaliculatus_F_contig141:28470..28716Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig141 28471..28716 -
1696845700.192309-CDS-H-canaliculatus_F_contig141:28470..287161696845700.192309-CDS-H-canaliculatus_F_contig141:28470..28716Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig141 28471..28716 -
1622929161.096136-CDS-H-canaliculatus_F_contig141:28998..290361622929161.096136-CDS-H-canaliculatus_F_contig141:28998..29036Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig141 28999..29036 -
1696845700.2010536-CDS-H-canaliculatus_F_contig141:28998..290361696845700.2010536-CDS-H-canaliculatus_F_contig141:28998..29036Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig141 28999..29036 -
1622929161.1160083-CDS-H-canaliculatus_F_contig141:29543..297461622929161.1160083-CDS-H-canaliculatus_F_contig141:29543..29746Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig141 29544..29746 -
1696845700.2092903-CDS-H-canaliculatus_F_contig141:29543..297461696845700.2092903-CDS-H-canaliculatus_F_contig141:29543..29746Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig141 29544..29746 -
1622929161.1327813-CDS-H-canaliculatus_F_contig141:30657..307641622929161.1327813-CDS-H-canaliculatus_F_contig141:30657..30764Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig141 30658..30764 -
1696845700.217604-CDS-H-canaliculatus_F_contig141:30657..307641696845700.217604-CDS-H-canaliculatus_F_contig141:30657..30764Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig141 30658..30764 -
1622929161.1505537-CDS-H-canaliculatus_F_contig141:31261..315751622929161.1505537-CDS-H-canaliculatus_F_contig141:31261..31575Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig141 31262..31575 -
1696845700.227092-CDS-H-canaliculatus_F_contig141:31261..315751696845700.227092-CDS-H-canaliculatus_F_contig141:31261..31575Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig141 31262..31575 -
1622929161.1695514-CDS-H-canaliculatus_F_contig141:32476..326501622929161.1695514-CDS-H-canaliculatus_F_contig141:32476..32650Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig141 32477..32650 -
1696845700.2368894-CDS-H-canaliculatus_F_contig141:32476..326501696845700.2368894-CDS-H-canaliculatus_F_contig141:32476..32650Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig141 32477..32650 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig141.3242.1prot_H-canaliculatus_F_contig141.3242.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig141 27118..32650 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig141.3242.1

>prot_H-canaliculatus_F_contig141.3242.1 ID=prot_H-canaliculatus_F_contig141.3242.1|Name=mRNA_H-canaliculatus_F_contig141.3242.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=496bp
LAASTTEECASLVPIEDRRRGKGAFFSGCISRSTTSSRGGCWSPLIEEQS
GCQTCIVQDSGSSAISDDAASSGTTQQQPNQWASSVFSTFFELELDPCPE
AVADIYGTPEGGILPFEEVQSADCVGDNDDQDGGENWFAFEASCYAKSSF
LDSASNWEDADARCRDMDARLVSLESEDENDFVTFNLLWIGFLGEAYTGL
QKLSADGTWSWRDSLADFPPGVFDANTSFQYWDEGLDASSSYESSGASCL
EILPYAPKAWNPFSCEVNKQYVCEKPAQPTPFLADEMPQPPTVTSSPSMP
GGSGGGDVRGGSPNDTPAPASAPAAADAQTGSPTGLNPGQESSTESPTGS
PTGSPTGSPTGVLTMSDGIVGIDDEEEEDSCAERLDDDDKAYLATYDMEV
YSDATSCVEAAATSAVTTTENPDWCNSFDAGQECRSCWLSCAGARMFLTD
FSWLSEEMIIFCPDVGLSTFDEDCLSEENDNRTDGRRTLMEKFGSF
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mRNA from alignment at H-canaliculatus_F_contig141:27118..32650-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig141.3242.1 ID=mRNA_H-canaliculatus_F_contig141.3242.1|Name=mRNA_H-canaliculatus_F_contig141.3242.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5533bp|location=Sequence derived from alignment at H-canaliculatus_F_contig141:27118..32650- (Hapterophycus canaliculatus Oshoro5f female)
CTGGCAGCGTCTACTACTGAAGAGTGTGCTTCGTTGGTGCCGATAGAGGA
CCGACGAAGAGGCAAGGGGGCTTTTTTCAGCGGCTGCATAAGCCGTTCCA
CTACCTCAAGCCGTGGAGGGTGTTGGTCGCCACTCATCGAAGAGCAGAGT
GGATGCCAAACATGCATTGTTCAGGTCCGTACGATATTATCCTGCACTTA
TTCACGCTTACTTACCATTTGACTATTTTAGTCATCAAAACACAGCAGCC
GTTGGCGTCCAAGATACTCTGCGGTAGACCTTTGAAATGTGAACACAGCA
AGGCCAGCCAATTTATTTTGAGCGACTGAAGTTCGCACCTATGGATTTTC
GCACGAAAATCCATAGGCACCATGCCAGCCACTAATCGTAGCAGAAGTTT
ACCCCGTCATGCTGCGGTAGAGTCTCTCCCCAGATGCAAACGCATAATCT
CAGACTTTTGTACTTGTAGATTGTTTCGGGAGGTTCCAGGGATAAGGGTA
CAACGGAATGAAGTCCGTTGTACAGTAGGAAAATGACCCCTCCCCCCTCC
CCTCTCTCTCTCCCTCACTCTCTTTCTCTCTCTCAAAGCCCCACGTGCTA
CTGTCGTTCAGAGTGCTCACTACAAATCTTTATGAATATCGATACGAGCA
ACACATCGATTGTGCTTCGATATATACACTGGAGTAATGGATAGACGGGG
AGCGAACGCCGCTTGTGATGACCTGCTTCACCGAAGCTTCTCCCCAATCC
GAACATCAACGTTTCCCAATACCCCTCCCCCCTTCTGAAGCGATTAGTTC
CTCTGAGTTACTCTTTATCCACAGCTAACCGGAGGAGGGTTAAGCCGATC
GATTCTCTACCTTCCGAACAAGGAACGCTGTGGTTTCCAACAGGCCTTAC
CCCCTGTCGCCGAAAGGCAGGTCGCAAAAGCAACTAAATTGAGGCATGGT
GGGAAGAGAGAGTCATCTGCAATATACCTACCCCACATAATAACGGTATT
TTACGGATGCATGAACGAACATTTTGGGTCTCACTGAGCTTCGGTCCCGA
ACGGGCAACAAAACAAACACCACAGGATAGCGGCAGCAGCGCCATAAGCG
ATGACGCCGCCTCTTCAGGAACAACGCAGCAGCAGCCAAACCAGTGGGCA
TCCTCAGTGTTCAGCACATTTTTCGAGCTCGAGCTGGATCCCTGCCCCGA
GGCCGTTGCCGATATCTACGGTACCCCGGAGGGTGGCATCTTGCCCTTTG
AAGAGGTGCAGTCCGCCGACTGTGTTGGCGACAACGACGACCAGGATGGC
GGAGAAAACTGGTTCGCGTTCGAGGCTAGCTGCTACGCTAAGAGCTCGTT
CCTGGATTCTGCGTCCAACTGGGAAGACGCCGACGCCAGGTATTTCTAGG
ACGCAAGAACGTGGGCTCTTTGGAAACGTGCATAAGCAGGTTGTTGTCGA
GTGTTGTTGCGTTAACCTTCGCCCTTCTGCTTCACGAAGCGGTGTGCGGA
ATGACCTCCAGTGTGAGGGGCTAGGACGAAGGCGTCTAATTCACGAAAAC
GGCAAGAAAAGGGACATAACTGAGCGGCCACCTTTTTTTGCTCATACCGT
CGCCAATATGAACTCATCAACGAACGACCTGTGTGTGTGTGTTGGCGTAG
CGTATTGCGCGTGTTCCATTTTTATACTACAGATGTTCGCCGTAAATTGT
GATCGATGGGAAGAGCCTTTGGAACGACCACGGGTGAGGTATTAGCAACG
ACGAAAATCAGCAGGAACACCAACATGGACACGACCTCCGGCACCGCCGC
CGCCAACAACAACAATAACAACACCGTGACGGTTTGTACTTTCTTTCGTT
TGGGGTGCCACGGCATTCCATGCGTACACACTCCAGATGCCGAGACATGG
ATGCAAGGCTCGTGAGCCTAGAGAGCGAAGATGAGAACGACTTCGTCACC
TTCAACCTGCTATGGATTGGCTTCCTTGGCGAGGCTTACACCGGTAAGGA
CGTGAGGCTTAAGCTTCAGTGGACTGGCTGAGACAATCCGTAAGACTGAC
GTCTGCTCTGCGATAAGCGAGTGGAACCGTATTTCATGCATCAGTTGCTG
GCTGGGTGGTGCACCGAGTTGGAGTAAATACGTCAAACCATTTCGCCCCA
TATGGCACATGCGAAAGCTTGCATAGTCATGAAATGCCGCCAGCAAGTGG
TGAGTTATTCTCCAAGCGCTCAAAGTGGAGCAATCACACCATCCATCAAC
GTTCCTCTTTAGCTGAAAACGTGTCCTAGTTCTGCGCGCGTCGTGAGCGA
CTATCATTATGTGTGTGACCGCATCACGAAGCGAGTAAGTGTATGTAGCA
GCTTTGCTTTCTGAAACTGGCTTTGGCCGACCGTGTGCGCCTTACGCTCT
TGGGACTGAATCAGTTCTTCAATGTTTGCTTTGTTTGTTTTTGCATGGGT
TGGAAAATATGAACAAAATCTCAAACCCTACCGCTTTTCAAGCGTGGGAA
TCTTACAATTTGTGCCGAAGCAGTACCAGTACCAGTAATGCTAGCAGGAG
GAGCACACCAAACGGAATGCGGTAGCAGTCACTCGACGACGAAGACTTGA
CCCATCGCGGGACATCGTTAGCGAAATTCTATCACAACGTGCACGACATG
TGATGGAACAGTTTCGAGAAAATCCTCGCACATCGCTTGCTGACGGCACG
AACACACCGAAACAACAGAGAACATGGGGGGAAGGAAGTCAAAGCGCATA
CCGCGAAAAACATCGCGAACACAGCCAAACCATAGTGCGAGCGCACTCTT
GCTGCTTTCACCAACTAACCTGCGAGAATCGAGCTGCCTATACAACATCA
ACCGACGAAACCGCGAGAGAAACAGGAAGCACGGTCCCGCCATTCGCTCA
CCAGGTCTGCAGAAGTTGTCCGCGGACGGCACGTGGAGCTGGAGGGACTC
CCTGGCCGACTTCCCCCCGGGCGTCTTCGACGCGAACACAAGTTTCCAGT
ACTGGGACGAGGGGCTGGACGCCTCCTCTTCCTACGAGAGCTCGGGGGCC
TCCTGTCTGGAAATACTGCCTTACGCCCCCAAAGCCTGGAACCCATTCTC
GTGCGAGGTGAATGGTCTCGTGTTGCTGTCGTTGTTGCTGATAAGCTTAT
CGAGATGCTTGTGAGGCGCCGTCCCAGGCGGGTGGGTACGTGAGGCGATC
GGTTAATCGATGGAGAGCCATTTTGCGCTGCTTGTCATATCTCCTTTAGT
ATTTTTTAACGAGTCCAAGCACCGGAAGCAGAAGTACGATCGGATAATCG
CGCTCTAAGCGGCGTGCAGTGCAACGAGTCACAGCTAATCCAAACGGTGC
TTTCATGTCTGCTTCTCAACGTACGATGGCATTCAAAGTCTCCGTGCACC
TACAGCACGGTCCACACAGAAAGAAGCAATGGTGGTACCACCACCAGCAT
ACCCAGCATTCCCCTCGGATGACGTCGCGTGCACGCACCGCCCTCTAGCG
TGGAGGACGCGCTTCCATCATATTTCTATAAAAAACCAATCCAAAAGGCG
TCATCCCAGATGTAGCGTACCCTCTCACAAATCTCACTTTTTGGTACTCC
GCCCTATCGACCAGGTCAACAAGCAATATGTGTGCGAAAAACCAGCACAG
CCGTCGGGAACTGGATTTCCTCTCCTCGCCGACGACGATGGCGACAGCGA
CAGCGACAGCGACGACGACGCCACATTCATCTCACCAGAAACACCTTCGC
CGACCGCACCTGGGCTGACATCGCTCGTAGAGCTGACACCTGCACCCGCA
GTACAGCCGACAGCTACGACACATTCGAGTGATGCTTCTTCACCCACCGC
TATCCAGCGAGAGGCCGAAACGCTGGCGCCAACGACACCGACACCAACCC
CTATTTCGAGTCACGAAAACGCATCTCCTACGAGCACGCCGTTCCTTGCG
GACGAAATGCCTCAACCACCAACGGTAACATCATCCCCGTCAATGCCGGG
CGGTAGTGGCGGCGGTGATGTACGTGGCGGATCGCCGAACGACACGCCCG
CGCCTGCCTCTGCACCTGCTGCTGCTGATGCCCAAACCGGATCACCCACA
GGATTGAACCCCGGACAAGAATCGTCGACAGAATCTCCTACGGGATCGCC
CACGGGATCGCCTACTGGGTCGCCCACAGGGTCGCCCACTGGGTCGCCCA
CTGGGTCGCCGACTGAATCGCCAACATCCTCTGCACCCAGCGTGTTGACC
ATGTCGGACGGAATTGTGGGTATCGATGATGAAGAAGAGGAGGACAGCTG
CGCAGAGCGGTTAGACGATGACGATAAAGCGTGAGTTAAGGTGAAGTGCG
AACCTTTGCGCTATTGTAACCTTCTGCTGTGTTTTGATGTTGCACTTTTG
CTCGATCGGGATAACACTCAGAAATTCTTGCGTCCCTGAACACGGCGAAA
ATTTCCCTGCTCATTGGTCTTCGTGGTCGGAGACGAGCGTAAGAGAGAAG
GCTATCCGCCCGTAATGTTTACCTCGCATACGGGCGATGTTTTCTTGTTT
GTCCCAGACATTCGGGTGCTTTAGAAGCCATCTCACCAATCAACATCGAC
CCGCGTATCGCTACTATACTGCAGTACAATCGGCCACCTTTTGTTCTCCT
GGTTCCAGAAGAACAACCTCCTGGACGAAGGCGGCGAGAAGCACGACATC
CTCACCCCTCTCGCCCAAATACAAACAAACATTCAAACGTCCGATGTTAG
TCTGGCGTGTTGTTCACACGGCGTCACGGTCTTGCCTCTTTCTCGTGCTC
CTTTCCGCCACAAAGGTACTTGGCCACATACGATATGGAAGTCTACAGCG
ACGCCACCTCCTGCGTGGAAGCGGCCGCCACCTCCGCGGTCACCACCACG
GAAAACCCAGACTGGTGCAACTCTTTCGACGCCGGCCAGGAGTGTCGCTC
CTGTTGGTTGTCCTGCGCCGGTGCACGCATGTTCTTGACCGACTTTTCCT
GGCTTTCGGAAGAAATGTGCGTGTGATGGTGTGACGTTGGCTGTGATGGC
GGCTGTGACCGTGGTGGCGGCAACGACGGGAAAACGATGTTGAAACGACG
TCAAACCGTGTGGGTTTGTCGCGAATGAGGGTCATCGAGGCCTCCGTTTA
CTCGACCATAACGGCTCCGGCGCCACGCGTTGTGCCGAAGTAATCATCAC
ACCGAAGGCGGAATAGTGAACCGCCAACAACATACTACGGAGAACATTGT
ATGCATACAGAAAGGCGCACCACTCACGTTCTCTCTCAGGGAAAAACGTT
TATCTTGTCCTCTCCCTCTCCCTCCTCCGCCCTTCTCTTTCCGCATATTA
CCCTCTCTCTCGGCATCTCTCATAATACTTTCTCTCTCTCATATCTCGCG
AAATCGCACTCACTCCAGGATCATTTTCTGCCCTGATGTGGGCCTATCGA
CCTTCGATGAAGACTGCCTGAGCGAAGAAAACGACAACAGGACCGACGGT
CGCCGTACGTTGATGGAAAAGTTTGGATCCTTT
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig141:27118..32650-

>mRNA_H-canaliculatus_F_contig141.3242.1 ID=mRNA_H-canaliculatus_F_contig141.3242.1|Name=mRNA_H-canaliculatus_F_contig141.3242.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2976bp|location=Sequence derived from alignment at H-canaliculatus_F_contig141:27118..32650- (Hapterophycus canaliculatus Oshoro5f female)
CTGGCAGCGTCTACTACTGAAGAGTGTGCTTCGTTGGTGCCGATAGAGGA
CCGACGAAGAGGCAAGGGGGCTTTTTTCAGCGGCTGCATAAGCCGTTCCA
CTACCTCAAGCCGTGGAGGGTGTTGGTCGCCACTCATCGAAGAGCAGAGT
GGATGCCAAACATGCATTGTTCAGCTGGCAGCGTCTACTACTGAAGAGTG
TGCTTCGTTGGTGCCGATAGAGGACCGACGAAGAGGCAAGGGGGCTTTTT
TCAGCGGCTGCATAAGCCGTTCCACTACCTCAAGCCGTGGAGGGTGTTGG
TCGCCACTCATCGAAGAGCAGAGTGGATGCCAAACATGCATTGTTCAGGA
TAGCGGCAGCAGCGCCATAAGCGATGACGCCGCCTCTTCAGGAACAACGC
AGCAGCAGCCAAACCAGTGGGCATCCTCAGTGTTCAGCACATTTTTCGAG
CTCGAGCTGGATCCCTGCCCCGAGGCCGTTGCCGATATCTACGGTACCCC
GGAGGGTGGCATCTTGCCCTTTGAAGAGGTGCAGTCCGCCGACTGTGTTG
GCGACAACGACGACCAGGATGGCGGAGAAAACTGGTTCGCGTTCGAGGCT
AGCTGCTACGCTAAGAGCTCGTTCCTGGATTCTGCGTCCAACTGGGAAGA
CGCCGACGCCAGGATAGCGGCAGCAGCGCCATAAGCGATGACGCCGCCTC
TTCAGGAACAACGCAGCAGCAGCCAAACCAGTGGGCATCCTCAGTGTTCA
GCACATTTTTCGAGCTCGAGCTGGATCCCTGCCCCGAGGCCGTTGCCGAT
ATCTACGGTACCCCGGAGGGTGGCATCTTGCCCTTTGAAGAGGTGCAGTC
CGCCGACTGTGTTGGCGACAACGACGACCAGGATGGCGGAGAAAACTGGT
TCGCGTTCGAGGCTAGCTGCTACGCTAAGAGCTCGTTCCTGGATTCTGCG
TCCAACTGGGAAGACGCCGACGCCAGATGCCGAGACATGGATGCAAGGCT
CGTGAGCCTAGAGAGCGAAGATGAGAACGACTTCGTCACCTTCAACCTGC
TATGGATTGGCTTCCTTGGCGAGGCTTACACCGATGCCGAGACATGGATG
CAAGGCTCGTGAGCCTAGAGAGCGAAGATGAGAACGACTTCGTCACCTTC
AACCTGCTATGGATTGGCTTCCTTGGCGAGGCTTACACCGGTCTGCAGAA
GTTGTCCGCGGACGGCACGTGGAGCTGGAGGGACTCCCTGGCCGACTTCC
CCCCGGGCGTCTTCGACGCGAACACAAGTTTCCAGTACTGGGACGAGGGG
CTGGACGCCTCCTCTTCCTACGAGAGCTCGGGGGCCTCCTGTCTGGAAAT
ACTGCCTTACGCCCCCAAAGCCTGGAACCCATTCTCGTGCGAGGTCTGCA
GAAGTTGTCCGCGGACGGCACGTGGAGCTGGAGGGACTCCCTGGCCGACT
TCCCCCCGGGCGTCTTCGACGCGAACACAAGTTTCCAGTACTGGGACGAG
GGGCTGGACGCCTCCTCTTCCTACGAGAGCTCGGGGGCCTCCTGTCTGGA
AATACTGCCTTACGCCCCCAAAGCCTGGAACCCATTCTCGTGCGAGGTCA
ACAAGCAATATGTGTGCGAAAAACCAGCACAGCCGTCAACAAGCAATATG
TGTGCGAAAAACCAGCACAGCCCACGCCGTTCCTTGCGGACGAAATGCCT
CAACCACCAACGGTAACATCATCCCCGTCAATGCCGGGCGGTAGTGGCGG
CGGTGATGTACGTGGCGGATCGCCGAACGACACGCCCGCGCCTGCCTCTG
CACCTGCTGCTGCTGATGCCCAAACCGGATCACCCACAGGATTGAACCCC
GGACAAGAATCGTCGACAGAATCTCCTACGGGATCGCCCACGGGATCGCC
TACTGGGTCGCCCACAGGCACGCCGTTCCTTGCGGACGAAATGCCTCAAC
CACCAACGGTAACATCATCCCCGTCAATGCCGGGCGGTAGTGGCGGCGGT
GATGTACGTGGCGGATCGCCGAACGACACGCCCGCGCCTGCCTCTGCACC
TGCTGCTGCTGATGCCCAAACCGGATCACCCACAGGATTGAACCCCGGAC
AAGAATCGTCGACAGAATCTCCTACGGGATCGCCCACGGGATCGCCTACT
GGGTCGCCCACAGGCGTGTTGACCATGTCGGACGGAATTGTGGGTATCGA
TGATGAAGAAGAGGAGGACAGCTGCGCAGAGCGGTTAGACGATGACGATA
AAGCCGTGTTGACCATGTCGGACGGAATTGTGGGTATCGATGATGAAGAA
GAGGAGGACAGCTGCGCAGAGCGGTTAGACGATGACGATAAAGCGTACTT
GGCCACATACGATATGGAAGTCTACAGCGACGCCACCTCCTGCGTGGAAG
CGGCCGCCACCTCCGCGGTCACCACCACGGAAAACCCAGACTGGTGCAAC
TCTTTCGACGCCGGCCAGGAGTGTCGCTCCTGTTGGTTGTCCTGCGCCGG
TGCACGCATGTTCTTGACCGACTTTTCCTGGCTTTCGGAAGAAATGTACT
TGGCCACATACGATATGGAAGTCTACAGCGACGCCACCTCCTGCGTGGAA
GCGGCCGCCACCTCCGCGGTCACCACCACGGAAAACCCAGACTGGTGCAA
CTCTTTCGACGCCGGCCAGGAGTGTCGCTCCTGTTGGTTGTCCTGCGCCG
GTGCACGCATGTTCTTGACCGACTTTTCCTGGCTTTCGGAAGAAATGATC
ATTTTCTGCCCTGATGTGGGCCTATCGACCTTCGATGAAGACTGCCTGAG
CGAAGAAAACGACAACAGGACCGACGGTCGCCGTACGTTGATGGAAAAGT
TTGGATCCTTTGATCATTTTCTGCCCTGATGTGGGCCTATCGACCTTCGA
TGAAGACTGCCTGAGCGAAGAAAACGACAACAGGACCGACGGTCGCCGTA
CGTTGATGGAAAAGTTTGGATCCTTT
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