mRNA_H-canaliculatus_F_contig1404.3207.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1404.3207.1 vs. uniprot
Match: D8LHF0_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF0_ECTSI) HSP 1 Score: 181 bits (458), Expect = 2.200e-55 Identity = 88/132 (66.67%), Postives = 104/132 (78.79%), Query Frame = 1
Query: 4 LPFGQLPILEVDGVVIPQSSAQLRYVGKIGGFYPTDPIQAAFCDAAADAVEDITDSMRGALYEKDPEKKIKIRRDLAEEIIPTWLANLEKVLDSAGGLYFAGGQLSTGDIAVVARLNWLKAGSLEGTPPTVV 399
LP+ Q+P+LEVDG VIPQS A LRYVGKIG YPTDPIQAAF D+A DAV DI MRG ++EKD +KK ++R+DL E ++PTWLANLEK L AGG YFAG +LS GDIAVVARLNWL G+ EG P T++
Sbjct: 46 LPYQQMPVLEVDGAVIPQSLAILRYVGKIGNLYPTDPIQAAFADSATDAVSDIQGYMRGIIFEKDADKKAQLRKDLVETLLPTWLANLEKALKLAGGEYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLL 177
BLAST of mRNA_H-canaliculatus_F_contig1404.3207.1 vs. uniprot
Match: B1N8E6_9PHAE (Glutathione S-transferase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E6_9PHAE) HSP 1 Score: 166 bits (419), Expect = 1.760e-49 Identity = 78/133 (58.65%), Postives = 103/133 (77.44%), Query Frame = 1
Query: 1 ALPFGQLPILEVDGVVIPQSSAQLRYVGKIGGFYPTDPIQAAFCDAAADAVEDITDSMRGALYEKDPEKKIKIRRDLAEEIIPTWLANLEKVLDSAGGLYFAGGQLSTGDIAVVARLNWLKAGSLEGTPPTVV 399
+LP+ QLP LEV G +IPQS AQ+RY+GKIGG Y DPI+AAF DAA +AV D+ +R ++E+DP KK+++R+ + + +PTWL NLE+ L +AGG YFAGG+LS GDI VVARLNWLK G+L+G P T+V
Sbjct: 46 SLPYNQLPTLEVGGTLIPQSLAQMRYIGKIGGLYSEDPIEAAFADAAMEAVIDMHFHLRPTVHEQDPAKKLEMRKAMTDNYLPTWLGNLERALKAAGGSYFAGGKLSIGDIYVVARLNWLKRGALDGIPDTIV 178
BLAST of mRNA_H-canaliculatus_F_contig1404.3207.1 vs. uniprot
Match: A0A6H5JAZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAZ7_9PHAE) HSP 1 Score: 162 bits (411), Expect = 6.410e-49 Identity = 79/127 (62.20%), Postives = 95/127 (74.80%), Query Frame = 1
Query: 19 LPILEVDGVVIPQSSAQLRYVGKIGGFYPTDPIQAAFCDAAADAVEDITDSMRGALYEKDPEKKIKIRRDLAEEIIPTWLANLEKVLDSAGGLYFAGGQLSTGDIAVVARLNWLKAGSLEGTPPTVV 399
+P+LEVDG VIPQS A LRYVGK+G YP DPIQAAF D+A DAV DI MRG ++EKD + K ++R+DL E ++P WL N EK L AGG YFAG +LS GDIAVVARLNWL G+ EG P T++
Sbjct: 1 MPVLEVDGAVIPQSVAILRYVGKMGNLYPNDPIQAAFADSAVDAVSDIHGYMRGIIFEKDADAKAQLRKDLVETLLPPWLTNSEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFEGVPSTLL 127
BLAST of mRNA_H-canaliculatus_F_contig1404.3207.1 vs. uniprot
Match: D8LK37_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK37_ECTSI) HSP 1 Score: 162 bits (410), Expect = 4.330e-48 Identity = 78/132 (59.09%), Postives = 99/132 (75.00%), Query Frame = 1
Query: 4 LPFGQLPILEVDGVVIPQSSAQLRYVGKIGGFYPTDPIQAAFCDAAADAVEDITDSMRGALYEKDPEKKIKIRRDLAEEIIPTWLANLEKVLDSAGGLYFAGGQLSTGDIAVVARLNWLKAGSLEGTPPTVV 399
LP+ Q+P+LEVDG VIPQ+ A LRYVGK+G YPTDPIQAAF D+A DAV D+ MR +EKD + K ++ +DL E+++P WLANLEK L AGG YFAG +LS GDIAVVARLNWL G+ + + P+ +
Sbjct: 46 LPYQQMPVLEVDGAVIPQTFAILRYVGKMGDLYPTDPIQAAFADSATDAVNDMHGHMRAIFFEKDADAKTQLLKDLVEKLLPPWLANLEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFDESVPSAI 177
BLAST of mRNA_H-canaliculatus_F_contig1404.3207.1 vs. uniprot
Match: B1N8E7_9PHAE (Glutathione S-transferase 2 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E7_9PHAE) HSP 1 Score: 154 bits (389), Expect = 7.600e-45 Identity = 76/132 (57.58%), Postives = 98/132 (74.24%), Query Frame = 1
Query: 4 LPFGQLPILEVDGVVIPQSSAQLRYVGKIGGFYPTDPIQAAFCDAAADAVEDITDSMRGALYEKDPEKKIKIRRDLAEEIIPTWLANLEKVLDSAGGLYFAGGQLSTGDIAVVARLNWLKAGSLEGTPPTVV 399
LP GQLPILEV G V+PQS AQLRYVGK+ G YP D ++AA DAA D+V D + + +KD +++++R++L + +PTWL NLEK L +AGG YFAGG+LS GDIAVVARL WLK GSL+G P ++V
Sbjct: 49 LPNGQLPILEVGGKVLPQSGAQLRYVGKLAGLYPEDALEAALADAAVDSVGDNHMKLAPTVQQKDKVQQMEMRQNLVRDFLPTWLGNLEKALANAGGTYFAGGKLSIGDIAVVARLVWLKEGSLDGIPTSIV 180
BLAST of mRNA_H-canaliculatus_F_contig1404.3207.1 vs. uniprot
Match: D7FPV3_ECTSI (Glutathione S-transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV3_ECTSI) HSP 1 Score: 128 bits (322), Expect = 1.790e-34 Identity = 61/132 (46.21%), Postives = 89/132 (67.42%), Query Frame = 1
Query: 4 LPFGQLPILEVDGVVIPQSSAQLRYVGKIGGFYPTDPIQAAFCDAAADAVEDITDSMRGALYEKDPEKKIKIRRDLAEEIIPTWLANLEKVLDSAGGLYFAGGQLSTGDIAVVARLNWLKAGSLEGTPPTVV 399
LPF QLPIL VD V PQS+A LRY GKIGG YP+DPI AA DA D + DI ++R ++YE + ++K+ +R++L+E +P WL LE+ L+ AG +F G +++ D+ + R+ WL+ G L G P T++
Sbjct: 46 LPFAQLPILTVDDEVFPQSAAILRYAGKIGGLYPSDPIAAAKVDAVIDCMFDIQAAIRPSIYETNAQRKLSMRKELSEVTLPLWLQYLERWLERAGTTFFVGEEITICDLVIYTRMKWLRRGVLVGIPDTIL 177
BLAST of mRNA_H-canaliculatus_F_contig1404.3207.1 vs. uniprot
Match: A0A2E7BV08_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E7BV08_9DELT) HSP 1 Score: 114 bits (285), Expect = 3.600e-29 Identity = 57/129 (44.19%), Postives = 81/129 (62.79%), Query Frame = 1
Query: 4 LPFGQLPILEVDGVVIPQSSAQLRYVGKIGGFYPTDPIQAAFCDAAADAVEDITDSMRGALYEKDPEKKIKIRRDLAEEIIPTWLANLEKVLDSAGGL-YFAGGQLSTGDIAVVARLNWLKAGSLEGTP 387
LP+GQLP+L+VD V I QS A RY GK+ G YP+D +QAA CD D IT + ++ KDPE+K ++R++LA++I P WL LE L++ G +F G L+ D+ + L WL+ G L+G P
Sbjct: 50 LPYGQLPVLDVDDVRIAQSVAIARYCGKVSGLYPSDALQAARCDELLDTATQITQDLGPSMRSKDPEEKARLRQNLAQKIFPRWLGMLEARLEANGDNGFFVGESLTMADLIIWRLLGWLRGGILDGIP 178
BLAST of mRNA_H-canaliculatus_F_contig1404.3207.1 vs. uniprot
Match: A0A382FZV4_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382FZV4_9ZZZZ) HSP 1 Score: 109 bits (272), Expect = 1.350e-27 Identity = 55/133 (41.35%), Postives = 81/133 (60.90%), Query Frame = 1
Query: 7 PFGQLPILEVDGVVIPQSSAQLRYVGKIGGFYPTD-PIQAAFCDAAADAVEDITDSMRGALYEKDPEKKIKIRRDLAEEIIPTWLANLEKVLDSAGGL-YFAGGQLSTGDIAVVARLNWLKAGSLEGTPPTVV 399
PFGQ P+L+VDG I Q+ A R+ GK+ G YPT+ AA D D DIT +R AL EKDPEK++++RR+L+E ++P WL +E +L++ G YF L+ D+A W+ G ++G P T++
Sbjct: 17 PFGQFPVLQVDGKTIAQTGAIARFCGKLSGLYPTENDFYAAKVDEVIDLATDITVKIRPALIEKDPEKRMEMRRELSETVLPHWLGFMETLLENNGKTGYFVDDSLTVADLAAWRLCGWISGGIIDGIPETIL 149
BLAST of mRNA_H-canaliculatus_F_contig1404.3207.1 vs. uniprot
Match: A0A534ZXF1_9DELT (Glutathione S-transferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534ZXF1_9DELT) HSP 1 Score: 109 bits (273), Expect = 2.110e-27 Identity = 57/127 (44.88%), Postives = 81/127 (63.78%), Query Frame = 1
Query: 7 PFGQLPILEVDGVVIPQSSAQLRYVGKIGGFYPTDPIQAAFCDAAADAVEDITDSMRGALYEKDPEKKIKIRRDLAEEIIPTWLANLEKVLDSAGGLYFAGGQLSTGDIAVVARLNWLKAGSLEGTP 387
PFG LP+LEVDG ++ QS+ RYVGK+ YP+DP QAA CD A +AVEDIT + + +KK + R+ LA+ I +L L++ L++ GG YFAGG+LS D+ V + L++G L+ P
Sbjct: 48 PFGSLPVLEVDGAIVTQSNGINRYVGKLADLYPSDPWQAALCDEAMEAVEDITSEVSATFSLPEDQKKAQ-RQALADGPITFFLTRLQQRLEAGGGQYFAGGRLSVADLKVFVWIRHLRSGKLDYIP 173
BLAST of mRNA_H-canaliculatus_F_contig1404.3207.1 vs. uniprot
Match: A0A3D0TLU2_9DELT (Uncharacterized protein n=4 Tax=Deltaproteobacteria TaxID=28221 RepID=A0A3D0TLU2_9DELT) HSP 1 Score: 109 bits (272), Expect = 2.980e-27 Identity = 57/129 (44.19%), Postives = 79/129 (61.24%), Query Frame = 1
Query: 7 PFGQLPILEVDGVVIPQSSAQLRYVGKIGGFYPT-DPIQAAFCDAAADAVEDITDSMRGALYEKDPEKKIKIRRDLAEEIIPTWLANLEKVLDSAGGL-YFAGGQLSTGDIAVVARLNWLKAGSLEGTP 387
PFGQ P+L+VDG I Q+ A R+ GK+ G YP+ D AA D D DIT+ MR AL EKDP+ +I++RR+L++ I+P WL LEK+L G +F G +S D+AV W+ G ++G P
Sbjct: 49 PFGQFPVLQVDGKTIAQTGAIARFCGKLSGLYPSKDEFAAAKVDEVIDLATDITNQMRPALREKDPKLRIEMRRELSKTILPRWLGFLEKLLQDNGDTGFFVGHSISVADLAVWRLCAWISGGIIDGLP 177 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1404.3207.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1404.3207.1 >prot_H-canaliculatus_F_contig1404.3207.1 ID=prot_H-canaliculatus_F_contig1404.3207.1|Name=mRNA_H-canaliculatus_F_contig1404.3207.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=133bp ALPFGQLPILEVDGVVIPQSSAQLRYVGKIGGFYPTDPIQAAFCDAAADAback to top mRNA from alignment at H-canaliculatus_F_contig1404:23298..25062- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1404.3207.1 ID=mRNA_H-canaliculatus_F_contig1404.3207.1|Name=mRNA_H-canaliculatus_F_contig1404.3207.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1765bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1404:23298..25062- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1404:23298..25062- >mRNA_H-canaliculatus_F_contig1404.3207.1 ID=mRNA_H-canaliculatus_F_contig1404.3207.1|Name=mRNA_H-canaliculatus_F_contig1404.3207.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=798bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1404:23298..25062- (Hapterophycus canaliculatus Oshoro5f female)back to top |