mRNA_H-canaliculatus_F_contig14001.3184.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig14001.3184.1 vs. uniprot
Match: D8LHU1_ECTSI (Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHU1_ECTSI) HSP 1 Score: 368 bits (945), Expect = 9.840e-128 Identity = 167/202 (82.67%), Postives = 181/202 (89.60%), Query Frame = 1
Query: 58 LLPSPALSSAIVPMIPPPYDERFSGDATYYGVTPDGDGNCAIGSPLPAMYDGMIPVALNNDQYGDSIMCGACIEGEGSGVGAGADPVEGAFKAYVTDRCPECAFGDLDFATAGDGRWDITWQFVPCEGSSDQSFLFEGSNEYYWKLQPRGGRSPVEKLWINGVEASRTQDNFFILEGGPFSGEQEVHTKTVLNKRRKQGVSM 663
LLP A S+ IVP+IPPPYDE+FSGDATYYGVTPDGDGNCAI SPLP MYDGMIPVALN++QY DS MCGACIEGEG G G G DPVEGAFKAYVTDRCPEC FGDLDFA GDGRWDI+W FVPCEG SDQ+FLFEGSNE+YWK+QPRGGRSPVE+LWING EA R++DNFFILEGGPF GEQEVHTKTVLNKRR+Q V+M
Sbjct: 19 LLPPRARSAMIVPLIPPPYDEQFSGDATYYGVTPDGDGNCAIRSPLPEMYDGMIPVALNDEQYADSYMCGACIEGEGFGEGEGRDPVEGAFKAYVTDRCPECLFGDLDFAADGDGRWDISWHFVPCEGGSDQTFLFEGSNEFYWKIQPRGGRSPVERLWINGDEAERSEDNFFILEGGPFDGEQEVHTKTVLNKRRRQSVAM 220
BLAST of mRNA_H-canaliculatus_F_contig14001.3184.1 vs. uniprot
Match: F2Z7J0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis andersonii TaxID=408198 RepID=F2Z7J0_9FLOR) HSP 1 Score: 211 bits (536), Expect = 1.070e-64 Identity = 105/197 (53.30%), Postives = 132/197 (67.01%), Query Frame = 1
Query: 52 SLLLPSPALSSAIVPMIPPPYDERFSGDATYYGVTPDGDGNCAIGSPLPAMYDGMIPVALNNDQYGDSIMCGACIEGEGSGVGAGADPVEGAFKAYVTDRCPECAFGDLDFATAGDGRWDITWQFVPCEGSSDQSFLFEGSNEYYWKLQPRGGRSPVEKLWINGVEASRTQDNFFILE-GGPFSGEQEVHTKTVLNK 639
+LLLP A+ + P Y F GD TYYG T G NCAI SPLP MY GM+PVA+NN QY +S CGAC+ G G G+GA+PV G FKAYV DRCPEC +GD+D + +GDGRW + W+F+PC G FLFEGSN +Y KLQPRG ++PV +NG + ++TQDNF+IL+ GG F V +TVLN+
Sbjct: 5 TLLLPI-----AVTALSPGDYRRTFFGDGTYYGYTTRG--NCAIRSPLPGMYSGMVPVAINNAQYEESKSCGACLLVTGYGQGSGANPVVGTFKAYVHDRCPECKYGDIDLSKSGDGRWKVQWRFIPCPGEW-VFFLFEGSNRFYLKLQPRGLKTPVTYFSVNGQQGTKTQDNFYILQNGGGFRYPLTVQMRTVLNE 193
BLAST of mRNA_H-canaliculatus_F_contig14001.3184.1 vs. uniprot
Match: A0A2V3ISL2_9FLOR (Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISL2_9FLOR) HSP 1 Score: 207 bits (527), Expect = 2.600e-63 Identity = 98/182 (53.85%), Postives = 126/182 (69.23%), Query Frame = 1
Query: 97 MIPPPYDERFSGDATYYGVTPDGDGNCAIGSPLPAMYDGMIPVALNNDQYGDSIMCGACIEGEGSGVGAGADPVEGAFKAYVTDRCPECAFGDLDFATAGDGRWDITWQFVPCEGSSDQSFLFEGSNEYYWKLQPRGGRSPVEKLWINGVEASRTQDNFFILE-GGPFSGEQEVHTKTVLNK 639
M P Y F G+ TYYG T G NCAI SP+P+MY+GM+PVA+NN QY +S CGAC++ G G G+GA+P+ G FKAYV DRCPEC +GD+D + GDGRW + W+F+PC G FLFEGSN YY KLQPRG ++PV L + G ++TQDNF+I++ GG F V +TVLN+
Sbjct: 20 MSPNDYYRVFHGEGTYYGYTTRG--NCAIRSPMPSMYNGMLPVAINNAQYENSASCGACLQVTGYGQGSGANPIRGTFKAYVHDRCPECKYGDIDLSKGGDGRWRVHWKFIPCPGEF-VFFLFEGSNRYYLKLQPRGLKTPVSALSVGGQWGTKTQDNFYIVQNGGGFRFPITVQMRTVLNE 198
BLAST of mRNA_H-canaliculatus_F_contig14001.3184.1 vs. uniprot
Match: D8LRN1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LRN1_ECTSI) HSP 1 Score: 204 bits (520), Expect = 2.960e-62 Identity = 97/186 (52.15%), Postives = 124/186 (66.67%), Query Frame = 1
Query: 112 YDERFSGDATYYGVTPDGDGNCAIGSPLPAMYDGMIPVALNNDQYGDSIMCGACIEGEGSGVGAGADPVEGAFKAYVTDRCPECAFGDLDFATAGDGRWDITWQFVPCEGSSDQSFLFEGSNEYYWKLQPRGGRSPVEKLWINGVEASRTQDNFFIL--EGGPFSGEQEVHTKTVLNKRRKQGVSM 663
Y E +SG+ TYYG T G C+ +P MYDGMIPVALN +QYGDS+MCGAC+EG SG G+G +P+ FKA++TD+CPEC GDLDF+ +GDGRWDI W+FV C G + SF+ +N YYWK+QPRG +PV L ++G A RT DN F + +G +SG Q V T TV VS+
Sbjct: 104 YGEEYSGEGTYYGHTTAG--MCSFFDDVPEMYDGMIPVALNAEQYGDSLMCGACVEGTASGSGSGNNPIPSTFKAFITDKCPECQKGDLDFSMSGDGRWDIEWKFVACPGE-ETSFVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEVHNDGAAWSGAQTVVTTTVSGVTETAEVSV 286
BLAST of mRNA_H-canaliculatus_F_contig14001.3184.1 vs. uniprot
Match: D8LGP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP4_ECTSI) HSP 1 Score: 201 bits (512), Expect = 9.900e-59 Identity = 97/176 (55.11%), Postives = 116/176 (65.91%), Query Frame = 1
Query: 112 YDERFSGDATYYGVTPDGDGNCAIGSPLPAMYDGMIPVALNNDQYGDSIMCGACIEGEGSGVGAGADPVEGAFKAYVTDRCPECAFGDLDFATAGDGRWDITWQFVPCEGSSDQSFLFEGSNEYYWKLQPRGGRSPVEKLWINGVEASRTQDNFFILE---GGPFSGEQEVHTKTV 630
Y F+G+ TYY T GNC P++YDGM PVALN QYGDS+MCGAC+EGEG+G G+G+DPV G FK ++ D+CPEC+ GDLDF T DGRWDI W+FV C + SF E EYYWK+QPRG +PVE L I G A+RT DN F LE G P+ Q V T TV
Sbjct: 311 YGITFNGEGTYYTGT--SAGNCGFFDDFPSIYDGMTPVALNEPQYGDSLMCGACVEGEGTGGGSGSDPV-GTFKGFIMDKCPECSEGDLDFGTGKDGRWDIKWKFVECPAGEEVSFKVEQKTEYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGDPWYEPQMVVTTTV 483
BLAST of mRNA_H-canaliculatus_F_contig14001.3184.1 vs. uniprot
Match: A0A6H5KBW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW3_9PHAE) HSP 1 Score: 186 bits (472), Expect = 1.580e-52 Identity = 98/195 (50.26%), Postives = 121/195 (62.05%), Query Frame = 1
Query: 64 PSPALSSAI--VPMIPPPYDERFSGDATYY-GVTPDGDGNCAIGSPLPAMYDGMIPVALNNDQYGDSIMCGACIEGEGSGVGAGADPVEGAFKAYVTDRCPECAFGDLDFATAGDGRWDITWQFVPCEGSSDQSFLFEGSNEYYWKLQPRGGRSPVEKLWINGVEASRTQDNFFILE---GGPFSGEQEVHTKTV 630
P+P++S A P+ Y F GD TYY G++ GNC P++Y GM PVALN QYGDS+MCG+C+EGEG+G G G +P+ G FK ++ D+CPEC GDLDF T DGRWDI W+FV C G + SF YYWK+QPRG +PVE L I G A+RT DN F LE G P+ Q V T TV
Sbjct: 330 PAPSMSEAESKTPISGGVYGTTFEGDGTYYTGISA---GNCGFFDDFPSIYSGMTPVALNAAQYGDSLMCGSCVEGEGTGGGGGDNPI-GTFKGFIMDKCPECHEGDLDFGTGLDGRWDIEWRFVACPGE-EVSFKVVEMTPYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGNPWYEPQMVVTTTV 519
BLAST of mRNA_H-canaliculatus_F_contig14001.3184.1 vs. uniprot
Match: A0A1X6NJE1_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJE1_PORUM) HSP 1 Score: 166 bits (419), Expect = 6.150e-48 Identity = 79/153 (51.63%), Postives = 100/153 (65.36%), Query Frame = 1
Query: 127 SGDATYYGVTPDGDGNCAIGSPLPAMYDGMIPVALNNDQYGDSIMCGACIEGEGSGVGAGADPVEGAFKAYVTDRCPECAFGDLDFATAGDGRWDITWQFVPCEGSSDQ-SFLFEGSNEYYWKLQPRGGRSPVEKLWINGVEASRTQDNFFIL 582
+G+ TY+G T G NCA+ PLPA Y G++ VA++ Y S CGAC+ GSG GAGA+P+ G F AYV DRCPECA GDLD AT GDGRW ++W VPC + FL EGSN +Y K+Q RG +P + + G +RTQDNFFI+
Sbjct: 49 AGEGTYFGPTTRG--NCAL-DPLPAQYGGLVGVAVSTADYAGSAACGACLRVTGSGDGAGANPITGTFSAYVMDRCPECAAGDLDLATPGDGRWAVSWTVVPCPTAGGAPEFLLEGSNPHYLKVQVRGLPAPAASVSVGGAACARTQDNFFIV 198
BLAST of mRNA_H-canaliculatus_F_contig14001.3184.1 vs. uniprot
Match: UPI00201F65F1 (uncharacterized protein LOC124131349 isoform X1 n=2 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F65F1) HSP 1 Score: 124 bits (311), Expect = 1.930e-31 Identity = 70/169 (41.42%), Postives = 92/169 (54.44%), Query Frame = 1
Query: 112 YDERFSGDATYYGVTPDGDGNCAIGSPL--PAMYDGMIP--VALNNDQYGDSIMCGACIEGEGSGVGAGADPVEGAFKAYVTDRCPECAFGDLDFATAGDGRWDITWQFVPCE-GSSDQSFLFEGSNEYYWKLQPRGGRSPVEKLWI----NGVEASRTQDNFFILEGG 591
+ ++F+GD TYYG T G C P PA + I VALN Q+ DS CG C + GSG G+G P+ G F + + CPEC G LDFA +GDGRW+I Q V C G+++ + F+G+N YY KLQ R R PV + + N V T D F+ L G
Sbjct: 24 FQQKFTGDGTYYGHTDTG--MCQYNPPSLPPAALNPKIKYTVALNKPQFQDSFGCGMCFKVHGSGKGSGNSPITGDFFVFANNLCPECHAGSLDFAVSGDGRWNIEIQAVQCPVGNTNIEYKFQGTNPYYIKLQVRNARIPVTEAEMMQGGNYVSMKHTADGFWELSNG 190
BLAST of mRNA_H-canaliculatus_F_contig14001.3184.1 vs. uniprot
Match: A0A2P6NBD6_9EUKA (Endochitinase-like n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NBD6_9EUKA) HSP 1 Score: 126 bits (317), Expect = 7.850e-30 Identity = 73/164 (44.51%), Postives = 95/164 (57.93%), Query Frame = 1
Query: 127 SGDATYYGVTPDGDGNCAIGSPLPAMYDGMIPV--ALNNDQYGDSIMCGACIEGEGSGVGAGADPVEGAFKAYVTDRCPECAFGDLDFATAGDGRWDITWQFVPCE-GSSDQSFLFEGSNEYYWKLQPRGGRSPVEKLWINGVEAS------RTQDNFFILEGG 591
+G ATYYG G GNC I P+P I V A+ + + S CG+CI+ GSG GAG++PV+G F A+V D+CP C G LDFA GDG WDI+W+ V C G+S + F+GSNE+Y K+Q R R+P+ + I RT DNFF L G
Sbjct: 338 NGKATYYGDDGTG-GNCQI-YPVPQNIKSNIDVSVAMVSAYWFGSAACGSCIQITGSGKGAGSNPVKGNFTAFVNDQCPTCVPGGLDFAKNGDGLWDISWKVVDCPVGNSGIYYAFQGSNEWYMKVQARNHRTPLNFISIQDPNTKQYRKMKRTGDNFFELPDG 499
BLAST of mRNA_H-canaliculatus_F_contig14001.3184.1 vs. uniprot
Match: A0A2P6NBF0_9EUKA (MAP/microtubule affinity-regulating kinase 3-like n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NBF0_9EUKA) HSP 1 Score: 126 bits (317), Expect = 8.200e-30 Identity = 73/164 (44.51%), Postives = 95/164 (57.93%), Query Frame = 1
Query: 127 SGDATYYGVTPDGDGNCAIGSPLPAMYDGMIPV--ALNNDQYGDSIMCGACIEGEGSGVGAGADPVEGAFKAYVTDRCPECAFGDLDFATAGDGRWDITWQFVPCE-GSSDQSFLFEGSNEYYWKLQPRGGRSPVEKLWINGVEAS------RTQDNFFILEGG 591
+G ATYYG G GNC I P+P I V A+ + + S CG+CI+ GSG GAG++PV+G F A+V D+CP C G LDFA GDG WDI+W+ V C G+S + F+GSNE+Y K+Q R R+P+ + I RT DNFF L G
Sbjct: 731 NGKATYYGDDGTG-GNCQI-YPVPQNIKSNIDVSVAMVSAYWFGSAACGSCIQITGSGKGAGSNPVKGNFTAFVNDQCPTCVPGGLDFAKNGDGLWDISWKVVDCPVGNSGIYYAFQGSNEWYMKVQARNHRTPLNFISIQDPNTKQYRKMKRTGDNFFELPDG 892 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14001.3184.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig14001.3184.1 >prot_H-canaliculatus_F_contig14001.3184.1 ID=prot_H-canaliculatus_F_contig14001.3184.1|Name=mRNA_H-canaliculatus_F_contig14001.3184.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=222bp MPARQVPLLAAVTASMASLLLPSPALSSAIVPMIPPPYDERFSGDATYYGback to top mRNA from alignment at H-canaliculatus_F_contig14001:133..2610+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig14001.3184.1 ID=mRNA_H-canaliculatus_F_contig14001.3184.1|Name=mRNA_H-canaliculatus_F_contig14001.3184.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2478bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14001:133..2610+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig14001:133..2610+ >mRNA_H-canaliculatus_F_contig14001.3184.1 ID=mRNA_H-canaliculatus_F_contig14001.3184.1|Name=mRNA_H-canaliculatus_F_contig14001.3184.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1332bp|location=Sequence derived from alignment at H-canaliculatus_F_contig14001:133..2610+ (Hapterophycus canaliculatus Oshoro5f female)back to top |