mRNA_H-canaliculatus_F_contig1400.3181.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1400.3181.1 vs. uniprot
Match: A0A6H5K3N3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3N3_9PHAE) HSP 1 Score: 542 bits (1397), Expect = 5.880e-185 Identity = 284/350 (81.14%), Postives = 310/350 (88.57%), Query Frame = 3
Query: 330 CSPYAQPSSRPPKFRVRVYNDRLFESLFDDGKTAPTSPRSYGRSVKSSRPSLPSQENRSEIMLKAGAFAKKERREKQYLLQLSQQQLLQDRLVRDQLLEAAASKEREFVRLSGEVVAGQSFVRELDRAMSIADEAQQSKTLKQFQEWDANVHGTIQRRIDRVLEEMDPKDINERRRGDLDKFLTTTNTKAAVFRDIIIESEYDPLEPNRRAIKAKVGHLRDPCSRVLDKRAEEDGLLVDRSAGGAGNRLRESFDVQLWEERKVHDTPHGFFAKMMGREAARSKMGGAKAAKKTSNTYKSTVKMDDYNVDRGRRVPPDIVTKEFPKGKKTYQAGDEFAPPSSDAKSLIGIG 1379
CSPYAQPS+RPP FRVRVYND LF+SL DDG+T+ TSPRS GRS KS RPS P QE+RSE MLKAGA AKK+RREKQYL QL+QQQLLQDRLVRD+LLEAAASKEREFVRLSGE+ AG++FV+ELDR + IADEAQ+ KTLKQ+QEWDANVHG IQ RID+VL++M KDINERRRGDLDKFLTTTNTKAAVFRDIIIESEYDPLEPNRRA+KAKVGHLRDPCSRVLDKRA+E+GLL D GGAG LRESFDV WEERKVHDTPHGFFAKMMGREAAR+KMGGA TS TY+ST+KMDDYNVDRGR DIVTKEFPKGKKTY AGDE APPSSDA+SLIG+G
Sbjct: 17 CSPYAQPSNRPPAFRVRVYNDGLFKSLLDDGRTSSTSPRSLGRSAKS-RPSRPPQEDRSEAMLKAGALAKKKRREKQYLFQLTQQQLLQDRLVRDKLLEAAASKEREFVRLSGEIEAGRTFVKELDRILGIADEAQRGKTLKQYQEWDANVHGAIQGRIDKVLDKMSSKDINERRRGDLDKFLTTTNTKAAVFRDIIIESEYDPLEPNRRAVKAKVGHLRDPCSRVLDKRAQENGLLADEGVGGAGAMLRESFDVIQWEERKVHDTPHGFFAKMMGREAARNKMGGAST---TSKTYRSTIKMDDYNVDRGR----DIVTKEFPKGKKTYPAGDELAPPSSDAESLIGMG 358
BLAST of mRNA_H-canaliculatus_F_contig1400.3181.1 vs. uniprot
Match: D8LIN6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIN6_ECTSI) HSP 1 Score: 470 bits (1209), Expect = 7.730e-158 Identity = 246/289 (85.12%), Postives = 263/289 (91.00%), Query Frame = 3
Query: 513 MLKAGAFAKKERREKQYLLQLSQQQLLQDRLVRDQLLEAAASKEREFVRLSGEVVAGQSFVRELDRAMSIADEAQQSKTLKQFQEWDANVHGTIQRRIDRVLEEMDPKDINERRRGDLDKFLTTTNTKAAVFRDIIIESEYDPLEPNRRAIKAKVGHLRDPCSRVLDKRAEEDGLLVDRSAGGAGNRLRESFDVQLWEERKVHDTPHGFFAKMMGREAARSKMGGAKAAKKTSNTYKSTVKMDDYNVDRGRRVPPDIVTKEFPKGKKTYQAGDEFAPPSSDAKSLIGIG 1379
MLKAGA AKK+RREKQYLLQL+QQQLLQDRLVRD+LLEAAASKEREFVRLSGEV AG++FV+ELDR + IADEAQQ KTLKQ+QEWDANVHG IQ RID+VL++M KDINERRRGDLDKFLTTTNTKAAVFRDIIIESEYDPLEPNRRA+KAKVGHLRDPCSRVLDKRAEE+GLL D AGGAG LRESFDV WEERKVHDTPHGFFAKMMGREAAR+KMGGAK TS TY+ST+KMDDYNVDRGR DIVTKEFPKGKKTY AGDEFAPPSSDAKSLIG+G
Sbjct: 1 MLKAGALAKKKRREKQYLLQLTQQQLLQDRLVRDKLLEAAASKEREFVRLSGEVEAGRTFVKELDRILGIADEAQQGKTLKQYQEWDANVHGAIQGRIDKVLDKMSSKDINERRRGDLDKFLTTTNTKAAVFRDIIIESEYDPLEPNRRAVKAKVGHLRDPCSRVLDKRAEENGLLADEGAGGAGAMLRESFDVIQWEERKVHDTPHGFFAKMMGREAARNKMGGAKT---TSKTYRSTIKMDDYNVDRGR----DIVTKEFPKGKKTYAAGDEFAPPSSDAKSLIGMG 282
BLAST of mRNA_H-canaliculatus_F_contig1400.3181.1 vs. uniprot
Match: A0A7S2FRU1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FRU1_9STRA) HSP 1 Score: 197 bits (501), Expect = 5.350e-53 Identity = 129/330 (39.09%), Postives = 191/330 (57.88%), Query Frame = 3
Query: 372 RVRVYNDRLFESLF-DDGKTA--------PTSPRSYGRS---VKSSRPSLPSQENRS-EIMLKAGAFAKKERREKQYLLQLSQQQLLQDRLVRDQLLEAAASKEREFVRLSGEVVAGQSFVRELDRAMSIADEAQQSKTLKQFQEWDANVHGTIQRRIDRVLEEMDPKDINERRRGDLDKFLTTTNTKAAVFRDIIIESEYDPLEPNRRAIKAKVGHLRDPCSRVLDKRAEEDGLLVDRSAGGAGN--RLRESFDVQLWEERKVHDTPHGFFAKMMGREAARSKMGGAKAAKKTSNTYKSTVKMDDYNVDRGRRVPPDIVTKEFPKGKKT 1316
RVR+YN+ FE+L DD K+ P + RS G V+ R ++ ++ R+ E +A +++RR +++ + + Q +R VR++L+ + +E +F ++V G+ E+ ++ + D A+Q+K +QF++W+ NV+G +Q RI L+ DIN +RR + KFL TTN+K A+FRDIIIESEYDPLEPNR IK +RDPCSRV+DK EE G+L SA A R R+S +V +W K+ TPHGFFAK+M E SK G +K+ S T+ S + D YNV G+ I EFP+GK+T
Sbjct: 14 RVRIYNEDHFETLLLDDDKSTQGGASPGKPETSRSGGGGTSRVEEERSAIKARSLRATERAREADLEEQRKRRFERHRDEAKRMQAESERQVRERLVMNSLRREDKFNHYYSDLVEGRRLASEIKTSLDLQDAAEQNKVRRQFEDWNQNVYGKLQNRISERLDRTTSHDINVKRRQEFQKFLDTTNSKGAIFRDIIIESEYDPLEPNRNCIKVDSSDVRDPCSRVVDKNLEESGMLDSPSAMAAAKMARTRDSLEVTMWGTGKIESTPHGFFAKIMANE---SKQG----SKEKSKTWDSRIPFDHYNVAVGKA----ITDTEFPRGKRT 332
BLAST of mRNA_H-canaliculatus_F_contig1400.3181.1 vs. uniprot
Match: F0YG16_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YG16_AURAN) HSP 1 Score: 185 bits (470), Expect = 8.330e-45 Identity = 125/351 (35.61%), Postives = 187/351 (53.28%), Query Frame = 3
Query: 315 RTAATCSPYAQPSSRPPKFRVRVYNDRLFESLFDDGKTAPTSPRSYGRSVKSSRPSLPSQENRSEIMLKAGAFAKKERREKQYLLQLSQQQLLQDRLVRDQLLEAAASKEREFVRLSGEVVAGQSFVRELDRAMSIADEAQQSKTLKQFQEWDANVHGTIQRRIDRVLEEMDPKDINERRRGDLDKFLTTTNTKAAVFRDIIIESEYDPLEPNRRAIKAKVGHLRDPCSRVLDKRAEEDGLLVDRSAGGAGNR----------------LRESFDVQLWEERKVHDTPHGFFAKMMGREAARSKMGGAKAAKKTSNTYKSTVKMDDYNVDRGRRVPPDIVTKEFPKGKKTY 1319
R AA+ S + +P P RV+VY++ L D + GR +S ++ +Q+ + A ++ RR +++ + +++Q +R VR+QL+E+AA +ER+F L ++V G E+ + +S+ + ++K +QF EW+ V+G IQ +I+ L+ MD +IN RRR + KFL TTN K A+FRDIIIESEYDPLEPNR IK K +RDP RVLDK EE +L D G +RE+ ++ W K+ TPHG+FAK+M + A+ G K S T++S + D YNV G KEFP GK+T+
Sbjct: 302 RVAASVSDHWKPPPPSPS-RVKVYDEDKLAMLLGDAPPPTHQSVTLGR-TRSIHAAMRAQQRSEKRRQAREAEEQRVRRYERHRDEANKRQAEAERAVREQLIESAARRERKFNELRSDIVEGHKLADEIQQHLSLQEMNARTKLKRQFDEWNDGVYGAIQDQINDRLDGMDSSEINRRRRHEFQKFLDTTNAKGAIFRDIIIESEYDPLEPNRNCIKVKTEGIRDPVKRVLDKHHEETSMLDDDGGGDXXXXXXXXXXXXXXXXPRPVVRETLEITSWGAGKIEATPHGYFAKLM--DEAKPPAGD----KGKSKTFESNIPFDHYNVSVGSAA----TDKEFPVGKRTH 640
BLAST of mRNA_H-canaliculatus_F_contig1400.3181.1 vs. uniprot
Match: A0A482S2M0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2M0_9ARCH) HSP 1 Score: 166 bits (421), Expect = 6.780e-42 Identity = 92/227 (40.53%), Postives = 133/227 (58.59%), Query Frame = 3
Query: 639 KEREFVRLSGEVVAGQSFVRELDRAMSIADEAQQSKTLKQFQEWDANVHGTIQRRIDRVLEEMDPKDINERRRGDLDKFLTTTNTKAAVFRDIIIESEYDPLEPNRRAIKAKVGHLRDPCSRVLDKRAEEDGLLVDRSAGGAGNRLRESFDVQLWEERKVHDTPHGFFAKMMGREAARSKMGGAKAAKKTSNTYKSTVKMDDYNVDRGRRVPPDIVTKEFPKGKKTY 1319
KE+EF L ++ + F+ +++ M +ADEA+++K +QF++W+ NVHG IQ++I ++ MD K +N ++ D DKFL TN KAA+FRDIIIESEYDPLEPNR +KAK L DP L K +E G+L A + + DVQLW ++ TP+G FAKMM + S S T +S+V D ++ +GR + KE P+GK+ Y
Sbjct: 94 KEKEFPELLAKIDRAREFLGTVEKEMELADEAKRNKVRRQFEDWNTNVHGVIQKKIASQIDSMDKKALNWKKNQDYDKFLGITNRKAAIFRDIIIESEYDPLEPNRHCVKAKTSKLHDPPKFGLHKAEKEKGMLGAEHAPPKVLLGKNTLDVQLWASGQIEATPYGTFAKMMNKPTGHS------GNSPQSATQRSSVAFDHFSFPQGRAA----IDKEMPRGKRVY 310
BLAST of mRNA_H-canaliculatus_F_contig1400.3181.1 vs. uniprot
Match: A0A8J2SEP3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEP3_9STRA) HSP 1 Score: 167 bits (422), Expect = 4.930e-41 Identity = 102/245 (41.63%), Postives = 133/245 (54.29%), Query Frame = 3
Query: 609 RDQLLEAAASKEREFVRLSGEVVAGQSFVRELDRAMSIADEAQQSKTLKQFQEWDANVHGTIQRRIDRVLEEMDPKDINERRRGDLDKFLTTTNTKAAVFRDIIIESEYDPLEPNRRAIKAKVGHLRDPCSRVLDKRAEEDGLLVDRSAGGAGNR--------LRESFDVQLWEERKVHDTPHGFFAKMMGREAARSKMGGAKAAKKTSNTYKSTVKMDDYNVDRGRRVPPDIVTKEFPKGKKTY 1319
R+++ E A +ER F L ++V G E+ + + + D +Q+K +QF EW++ V+G IQ +I+ L+ IN RRR + KFL TN K A+FRDIIIESEYDPLEPNR IK LRDP RVLD++ EE G+L S R RE DV+ W K+ DTPHGFFAKMM A KKTS TY S V D + V + + EFP+GKK +
Sbjct: 208 RERVAENANRRERRFEFLRSDIVEGHKLADEVQKHLQLEDMNKQTKLKRQFDEWNSEVYGKIQDQINERLDSTTAAQINARRRREYQKFLDATNAKGAIFRDIIIESEYDPLEPNRHCIKVDTYGLRDPMKRVLDRQYEEQGMLDASSDEEDKKRKPRRPRPHTREVLDVREWATGKIEDTPHGFFAKMMDATPR------APGEKKTSKTYDSKVPFDHFQVQKS-------LDGEFPRGKKPH 439
BLAST of mRNA_H-canaliculatus_F_contig1400.3181.1 vs. uniprot
Match: A0A7S1XXV3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXV3_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.330e-37 Identity = 92/237 (38.82%), Postives = 132/237 (55.70%), Query Frame = 3
Query: 606 VRDQLLEAAASKEREFVRLSGEVVAGQSFVRELDRAMSIADEAQQSKTLKQFQEWDANVHGTIQRRIDRVLEEMDPKDINERRRGDLDKFLTTTNTKAAVFRDIIIESEYDPLEPNRRAIKAKVGHLRDPCSRVLDKRAEEDGLLVDRSAGGAGNRLRESFDVQLWEERKVHDTPHGFFAKMMGREAARSKMGGAKAAKKTSNTYKSTVKMDDYNVDRGRRVPPDIVTKEFPKGKKT 1316
VR+++ E A +E +F L V G V E+++ M++ D + +K ++F++W+ NV+G I I R L E +++N RR D +FL TNTK A+FRDIII EYDPL PNRR I+A+ + DP RVL +R EE+ +L R + ++ W K+ TPHGFFA+MM AK K N Y S++ +D YN+ GR V V EFP+GK+T
Sbjct: 92 VREKIAENARRREDDFQALKTSVFEGHQLVDEIEKDMTLKDMNELNKQRRKFEDWNTNVYGKIHGDITRQLNERPYQEVNVNRRRDFQQFLDATNTKGALFRDIIIPEEYDPLAPNRRCIRAQPKTIDDPVKRVLARRDEEERMLEGPKPQVPLGR-KSDLKLEHWASGKIEATPHGFFARMM-----------AKPQGKGDNLYASSIVLDHYNIATGRAV----VNAEFPRGKRT 312
BLAST of mRNA_H-canaliculatus_F_contig1400.3181.1 vs. uniprot
Match: A0A7S3XKK9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKK9_HETAK) HSP 1 Score: 139 bits (350), Expect = 5.520e-33 Identity = 89/240 (37.08%), Postives = 130/240 (54.17%), Query Frame = 3
Query: 606 VRDQLLEAAASKEREFVRLSGEVVAGQSFVRELDRAMSIADEAQQSKTLKQFQEWDANVHGTIQRRIDRVLEEMDPKDINERRRGDLDKFLTTTNTKA-AVFRDIIIESEYDPLEPNRRAIKAKVGH-LRDPCSRVLDKRAEEDGLLVDRSAGGAGNRLRESFDVQLWEERKVHDTPHGFFAKMMGREAARSKMGGAKAAKKTSNTYKSTVKMDDYNVDRGRRVPPDIVTKEFPKGKKTY 1319
V+ +L + A++E++F L +V G+ E DRA+++ D A++ KT KQF EW+ V+G +Q +I L+ D K++ +R +L T+N K AVFRDIIIESEYDPL PNR AI+ + G LRDP RV D+ EE LL + ++RE+ V W K+ T HGF KMM R + ST+ MD YN+++ + +EFP GK+ +
Sbjct: 50 VKAKLADNQANREKKFEDLMYDVKMGKELTEEADRAIALYDTARRLKTEKQFDEWNTGVYGHLQEKICEDLDRRDYKELQRQRNQAFQDYLDTSNKKGGAVFRDIIIESEYDPLAPNRGAIRVRGGRALRDPTRRVNDRHHEEQSLLAEGRVSREP-KVRETLRVGEWATGKIEATSHGFMHKMMHRNPSEH----------DGKPTHSTIAMDHYNIEKSSK----FTNQEFPIGKRIF 274
BLAST of mRNA_H-canaliculatus_F_contig1400.3181.1 vs. uniprot
Match: A0A835YXY0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXY0_9STRA) HSP 1 Score: 139 bits (351), Expect = 9.980e-32 Identity = 100/275 (36.36%), Postives = 144/275 (52.36%), Query Frame = 3
Query: 333 SPYAQPSSRPPKFRVRVYNDRLFESLFDDGKTAPTSPRSYGRSVKSSRPSLPSQENRSEIMLKAGAFAKKERREKQYLLQLSQQQLLQDRLVRDQLLEAAASKEREFVRLSGEVVAGQSFVRELDRAMSIADEAQQSKTLKQFQEWDANVHGTIQRRIDRVLEEMDPKDINERRRGDLDKFLTTTNTKAAVFRDIIIESEYDPLEPNRRAIKAKVGHLRDPCSRVLDKRAEEDGLLVDRSAG----GAGN------RLRESFD--VQLWEERKVH 1121
SPYAQ RP +R++VY++ L + TA T AK+ R ++Y L+ ++ Q +RLV+++ A+KE ++ L G+V+AG V ELDRAM I D A+ +K LKQ EW NV+G IQ +I + ++ MDPK ++++++ D FL N K A+FRDI++ESEYDP E NRRAIKA+V L DP SR D R E G + +S G G RL + F ++E+ K H
Sbjct: 10 SPYAQRIERPDPYRMKVYDEGLAFQIRQPVPTAMTED------------------------------AKRLRLAEKYALEQARLQAETERLVQERKAARTAAKEAQYTALYGDVMAGHDLVDELDRAMDIVDSAEYNKRLKQHSEWTQNVYGAIQAQIRQQIDAMDPKALSKQKQDDYQLFLDEANRKPAIFRDIVVESEYDPFEVNRRAIKARVPKLVDPTSRPTD-RTERWGSCLAQSMSQLRLGVGAFEEVVARLHDEFSRLEGIFEDVKAH 253
BLAST of mRNA_H-canaliculatus_F_contig1400.3181.1 vs. uniprot
Match: A0A6G0XK92_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XK92_9STRA) HSP 1 Score: 130 bits (327), Expect = 1.110e-29 Identity = 83/269 (30.86%), Postives = 143/269 (53.16%), Query Frame = 3
Query: 567 LQLSQQQLLQDRL---VRDQLLEAAASKEREFVRLSGEVVAGQSFVRELDRAMSIADEAQQSKTLKQFQEWDANVHGTIQRRIDRVLEEMDPKDINERRRGDLDKFLTTTNTKAAVFRDIIIESEYDPLEPNRRAIKAKVGHLRDPCSRVLDKRAEEDGLLVDR---------SAGGAGNRLR---ESFDVQLWEERKVHDTPHGFFAKMMGREAARSKMGGAKAAKKTSNTYKSTVKMDDYNVDRGRRVPPDIVTKEFPKGKKTYQAG 1328
L + +Q+ +Q ++ + + L + +E F++L ++ G+ EL +++ +E + + + + EW V+ + R I+ ++ MDPK +N+ ++ FL T N K +FRDIIIESEYDPL N+ A+K + + DPCSRVL R EED + + S +GN + ++ D +LW + TP+G+F KMM + ++++S TY+S VK D Y++++G + +EFPKGK+T G
Sbjct: 5 LYMKEQEAIQKQVQINIAEALTKQRNKREANFLKLRNDIEEGKVLAEELGERLTLKEETAKRQKQRLYDEWTEKVYNKLNRPINEKIKSMDPKALNQHKQEAYQHFLDTVNKKGCLFRDIIIESEYDPLNDNK-AVKYRT-RVDDPCSRVLKTRDEEDAIAKEGRNVMNESMDSTSTSGNVVLGRCDNLDTKLWAKGIFESTPYGYFNKMMA----------STISEESSKTYQSRVKFDHYDIEQGSAT----LNQEFPKGKRTTFGG 257 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1400.3181.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1400.3181.1 >prot_H-canaliculatus_F_contig1400.3181.1 ID=prot_H-canaliculatus_F_contig1400.3181.1|Name=mRNA_H-canaliculatus_F_contig1400.3181.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=366bp MRASDDGPVVRTAATCSPYAQPSSRPPKFRVRVYNDRLFESLFDDGKTAPback to top mRNA from alignment at H-canaliculatus_F_contig1400:13068..20664+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1400.3181.1 ID=mRNA_H-canaliculatus_F_contig1400.3181.1|Name=mRNA_H-canaliculatus_F_contig1400.3181.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=7597bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1400:13068..20664+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1400:13068..20664+ >mRNA_H-canaliculatus_F_contig1400.3181.1 ID=mRNA_H-canaliculatus_F_contig1400.3181.1|Name=mRNA_H-canaliculatus_F_contig1400.3181.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2196bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1400:13068..20664+ (Hapterophycus canaliculatus Oshoro5f female)back to top |