mRNA_H-canaliculatus_F_contig13990.3160.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13990.3160.1 vs. uniprot
Match: D7G558_ECTSI (Glucose-6-phosphate isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G558_ECTSI) HSP 1 Score: 259 bits (661), Expect = 6.370e-85 Identity = 122/127 (96.06%), Postives = 126/127 (99.21%), Query Frame = 1
Query: 1 MGDDPKVAMKHMAACASESATERVTAFGIPKDRLFPLWDWVGGRYSVCSSVGALPLSLKYGFQQFDSFLAGARSMDRHFLHAPFEKNMPVLMGLLGVWNISFMGYKTRTILPYAEALLKFPAHIQQV 381
MG+DPKVAMKH+AACASESA+ERVTAFGIPKDRLFPLWDWVGGRYSVCSSVGALPLSLKYGFQQFDSFLAGARSMDRHFLHAP EKNMPVLMGLLGVWNISFMGYKTRTILPYAEALLKFPAHIQQ+
Sbjct: 1 MGEDPKVAMKHLAACASESASERVTAFGIPKDRLFPLWDWVGGRYSVCSSVGALPLSLKYGFQQFDSFLAGARSMDRHFLHAPLEKNMPVLMGLLGVWNISFMGYKTRTILPYAEALLKFPAHIQQL 127
BLAST of mRNA_H-canaliculatus_F_contig13990.3160.1 vs. uniprot
Match: A0A6H5L7H9_9PHAE (Glucose-6-phosphate isomerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7H9_9PHAE) HSP 1 Score: 248 bits (632), Expect = 3.630e-83 Identity = 117/120 (97.50%), Postives = 119/120 (99.17%), Query Frame = 1
Query: 25 MKHMAACASESATERVTAFGIPKDRLFPLWDWVGGRYSVCSSVGALPLSLKYGFQQFDSFLAGARSMDRHFLHAPFEKNMPVLMGLLGVWNISFMGYKTRTILPYAEALLKFPAHIQQVR 384
MKH+AACASESATERVTAFGIPKDRLFPLWDWVGGRYSVCSSVGALPLSLKYGFQQFDSFLAGARSMDRHFLHAP EKNMPVLMGLLGVWNISFMGYKTRTILPYAEALLKFPAHIQQ+R
Sbjct: 1 MKHLAACASESATERVTAFGIPKDRLFPLWDWVGGRYSVCSSVGALPLSLKYGFQQFDSFLAGARSMDRHFLHAPLEKNMPVLMGLLGVWNISFMGYKTRTILPYAEALLKFPAHIQQLR 120
BLAST of mRNA_H-canaliculatus_F_contig13990.3160.1 vs. uniprot
Match: A0A836CFZ0_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFZ0_9STRA) HSP 1 Score: 209 bits (533), Expect = 1.380e-62 Identity = 97/127 (76.38%), Postives = 107/127 (84.25%), Query Frame = 1
Query: 1 MGDDPKVAMKHMAACASESATERVTAFGIPKDRLFPLWDWVGGRYSVCSSVGALPLSLKYGFQQFDSFLAGARSMDRHFLHAPFEKNMPVLMGLLGVWNISFMGYKTRTILPYAEALLKFPAHIQQV 381
MG DP V +HMAACAS SA RV FGIP + LF WDWVGGRYSVCSSVGALPLSLKYG+ FD FLAGAR++D HF HAP ++N+PVLMGLLGVWN+SFMGYKTRTILPYAEALLK PAHIQQ+
Sbjct: 253 MGKDPSVVARHMAACASSSAAARVQNFGIPPEHLFEFWDWVGGRYSVCSSVGALPLSLKYGYGMFDRFLAGARAVDIHFQHAPLDRNLPVLMGLLGVWNMSFMGYKTRTILPYAEALLKLPAHIQQL 379
BLAST of mRNA_H-canaliculatus_F_contig13990.3160.1 vs. uniprot
Match: A0A4D9DHN0_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DHN0_9STRA) HSP 1 Score: 212 bits (539), Expect = 1.950e-62 Identity = 97/127 (76.38%), Postives = 110/127 (86.61%), Query Frame = 1
Query: 1 MGDDPKVAMKHMAACASESATERVTAFGIPKDRLFPLWDWVGGRYSVCSSVGALPLSLKYGFQQFDSFLAGARSMDRHFLHAPFEKNMPVLMGLLGVWNISFMGYKTRTILPYAEALLKFPAHIQQV 381
MG P V KHMAACAS SAT+ V AFGIP +RLF WDWVGGRYSVC+S GALP+SLK+GF F+ FLAGARSMDRHFL APFEKN+PVLMGLLGVWN+SF+GY+ RTI+PYAEA++KFPAHIQQV
Sbjct: 375 MGTHPDVCAKHMAACASASATQLVEAFGIPSERLFEFWDWVGGRYSVCASPGALPISLKFGFSVFEKFLAGARSMDRHFLTAPFEKNLPVLMGLLGVWNMSFLGYRCRTIIPYAEAMMKFPAHIQQV 501
BLAST of mRNA_H-canaliculatus_F_contig13990.3160.1 vs. uniprot
Match: W7U929_9STRA (Glucose-6-phosphate isomerase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U929_9STRA) HSP 1 Score: 211 bits (537), Expect = 7.150e-61 Identity = 97/127 (76.38%), Postives = 110/127 (86.61%), Query Frame = 1
Query: 1 MGDDPKVAMKHMAACASESATERVTAFGIPKDRLFPLWDWVGGRYSVCSSVGALPLSLKYGFQQFDSFLAGARSMDRHFLHAPFEKNMPVLMGLLGVWNISFMGYKTRTILPYAEALLKFPAHIQQV 381
MG P V KHMAACAS SAT+ V AFGIP +RLF WDWVGGRYSVC+S GALP+SLK+GF F+ FLAGARSMDRHFL APFEKN+PVLMGLLGVWN+SF+GY+ RTI+PYAEA++KFPAHIQQV
Sbjct: 1284 MGTHPDVCAKHMAACASASATQLVEAFGIPGERLFEFWDWVGGRYSVCASPGALPISLKFGFSVFEKFLAGARSMDRHFLTAPFEKNLPVLMGLLGVWNMSFLGYRCRTIIPYAEAMMKFPAHIQQV 1410
BLAST of mRNA_H-canaliculatus_F_contig13990.3160.1 vs. uniprot
Match: A0A836C893_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C893_9STRA) HSP 1 Score: 204 bits (520), Expect = 7.220e-60 Identity = 95/127 (74.80%), Postives = 106/127 (83.46%), Query Frame = 1
Query: 1 MGDDPKVAMKHMAACASESATERVTAFGIPKDRLFPLWDWVGGRYSVCSSVGALPLSLKYGFQQFDSFLAGARSMDRHFLHAPFEKNMPVLMGLLGVWNISFMGYKTRTILPYAEALLKFPAHIQQV 381
MG DP V HMAACAS SA +RV FGIP++ +F WDWVGGRYSVCSSVGALPLSLKYG+ F FLAGAR++D HF HAP E+N+PVLMGLLGVWN SFMGY+TRTILPYAEALLK PAHIQQ+
Sbjct: 252 MGKDPAVVASHMAACASTSAIKRVQDFGIPQEHVFMFWDWVGGRYSVCSSVGALPLSLKYGYGMFQRFLAGARAVDIHFQHAPLERNLPVLMGLLGVWNASFMGYRTRTILPYAEALLKLPAHIQQL 378
BLAST of mRNA_H-canaliculatus_F_contig13990.3160.1 vs. uniprot
Match: A0A7S2C1K8_9STRA (Glucose-6-phosphate isomerase (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C1K8_9STRA) HSP 1 Score: 183 bits (465), Expect = 1.160e-57 Identity = 80/117 (68.38%), Postives = 97/117 (82.91%), Query Frame = 1
Query: 31 HMAACASESATERVTAFGIPKDRLFPLWDWVGGRYSVCSSVGALPLSLKYGFQQFDSFLAGARSMDRHFLHAPFEKNMPVLMGLLGVWNISFMGYKTRTILPYAEALLKFPAHIQQV 381
H+ ACASESA++ V AFG+ +D F WDWVGGRYSVCSS G +PLSLKYG+ + LAGARSMD+HF + P E+N+PVLMGLLGVWN+SF+GYK RT+LPY+EAL KFPAH+QQV
Sbjct: 2 HVVACASESASKHVKAFGVREDHFFQFWDWVGGRYSVCSSAGLVPLSLKYGYPLVEKLLAGARSMDQHFFNTPLERNLPVLMGLLGVWNLSFLGYKARTMLPYSEALCKFPAHVQQV 118
BLAST of mRNA_H-canaliculatus_F_contig13990.3160.1 vs. uniprot
Match: A0A7S3XRJ3_HETAK (Glucose-6-phosphate isomerase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRJ3_HETAK) HSP 1 Score: 193 bits (490), Expect = 6.960e-57 Identity = 87/127 (68.50%), Postives = 105/127 (82.68%), Query Frame = 1
Query: 1 MGDDPKVAMKHMAACASESATERVTAFGIPKDRLFPLWDWVGGRYSVCSSVGALPLSLKYGFQQFDSFLAGARSMDRHFLHAPFEKNMPVLMGLLGVWNISFMGYKTRTILPYAEALLKFPAHIQQV 381
+G+DP+V +HM A AS SA RV FGIP+DRLF WDWVGGRYSVCS+VGALP+ LK+G FD FLAG R+MDRHF APFE+N+ V+MGLLGVWN SF+G++TRT +PYAEALL+FPAHIQQ+
Sbjct: 155 LGNDPEVISRHMCAVASSSAQARVVGFGIPEDRLFEFWDWVGGRYSVCSAVGALPICLKFGPALFDDFLAGCRAMDRHFAQAPFERNLMVVMGLLGVWNTSFLGHQTRTTMPYAEALLRFPAHIQQL 281
BLAST of mRNA_H-canaliculatus_F_contig13990.3160.1 vs. uniprot
Match: A0A7R9Y962_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y962_9STRA) HSP 1 Score: 183 bits (465), Expect = 7.760e-52 Identity = 85/122 (69.67%), Postives = 94/122 (77.05%), Query Frame = 1
Query: 16 KVAMKHMAACASESATERVTAFGIPKDRLFPLWDWVGGRYSVCSSVGALPLSLKYGFQQFDSFLAGARSMDRHFLHAPFEKNMPVLMGLLGVWNISFMGYKTRTILPYAEALLKFPAHIQQV 381
+V KH ACASES+ E V FGIP RLF WDWVGGRYSVCSSVG LP++LKYGF D FLAGARSMDRHF P KN+P+++GLLGVWN SF+ Y RT LPYAEALLK PAHIQQV
Sbjct: 341 EVVSKHFVACASESSIELVHGFGIPSARLFRFWDWVGGRYSVCSSVGILPIALKYGFDLIDKFLAGARSMDRHFREQPMHKNIPIILGLLGVWNTSFLKYSMRTTLPYAEALLKLPAHIQQV 462
BLAST of mRNA_H-canaliculatus_F_contig13990.3160.1 vs. uniprot
Match: A0A7S1Z1A0_TRICV (Glucose-6-phosphate isomerase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z1A0_TRICV) HSP 1 Score: 173 bits (438), Expect = 8.720e-52 Identity = 79/122 (64.75%), Postives = 96/122 (78.69%), Query Frame = 1
Query: 19 VAMKHMAACASESATERVTAFGIPKDR-LFPLWDWVGGRYSVCSSVGALPLSLKYGFQQFDSFLAGARSMDRHFLHAPFEKNMPVLMGLLGVWNISFMGYKTRTILPYAEALLKFPAHIQQV 381
V KH+ ACAS SA ++V AFG+ + F WDWVGGRYSVCS+ GA+P+SL YG+ F+ FL GA S+D HFL APF +N+PV+MGLLGVWN+SF+GY TRT LPYAEALLK PAHIQQ+
Sbjct: 2 VVRKHVVACASISALDKVEAFGVDTENYFFRFWDWVGGRYSVCSAAGAVPISLLYGYDLFEKFLEGANSIDEHFLTAPFRENIPVIMGLLGVWNMSFLGYNTRTTLPYAEALLKLPAHIQQL 123 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13990.3160.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13990.3160.1 >prot_H-canaliculatus_F_contig13990.3160.1 ID=prot_H-canaliculatus_F_contig13990.3160.1|Name=mRNA_H-canaliculatus_F_contig13990.3160.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=129bp MGDDPKVAMKHMAACASESATERVTAFGIPKDRLFPLWDWVGGRYSVCSSback to top mRNA from alignment at H-canaliculatus_F_contig13990:689..2714- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13990.3160.1 ID=mRNA_H-canaliculatus_F_contig13990.3160.1|Name=mRNA_H-canaliculatus_F_contig13990.3160.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2026bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13990:689..2714- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13990:689..2714- >mRNA_H-canaliculatus_F_contig13990.3160.1 ID=mRNA_H-canaliculatus_F_contig13990.3160.1|Name=mRNA_H-canaliculatus_F_contig13990.3160.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=774bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13990:689..2714- (Hapterophycus canaliculatus Oshoro5f female)back to top |