mRNA_H-canaliculatus_F_contig1399.3157.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1399.3157.1
Unique NamemRNA_H-canaliculatus_F_contig1399.3157.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1399.3157.1 vs. uniprot
Match: A0A6H5K9D0_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9D0_9PHAE)

HSP 1 Score: 390 bits (1003), Expect = 2.600e-118
Identity = 272/509 (53.44%), Postives = 296/509 (58.15%), Query Frame = 1 
Query:   46 MAPRQVIPYDEGGG-RTSRQLLFETQQQXRQR---------HQQQ-WADPAAVENELPSCFAPP----GIGRREDFEHQEQPHSSDLRDALGDEDDEDDDGGESVELGAPTSWVSRDLVPKPPGVEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATSEEANRAIDTMHRFEFKHGRFLGVLPSDENRTLFVGGLREEWSCAYICQLLQEKMPGLRKVEPIPDREDPFKIRTFCFLEFASHAEAAAIFNRHQTSPRPALQRASSVPPXXXXXXXXDPGATSLELQASPPSRVSGAGVDGVDVFLERD-NRDGSTSTGDTSGGEFFASGARAPAPSSPDHDGGDSAGGLLHFEASGLSSVWGQRRLGAEVEDRVACGAGGGGLRLSEDGFPSWSDAPAAAHTAXXXXXXXXATPEESGYLSAAXXXXXXXXXXDDGVGANTARGVPLVVGGATLKVDWADPLRYHIHLNGGIKGPSAPPEFGMLDGRPSSRG 1524
            MAPRQV PYDE G  RT RQLL E+Q  X            HQ++ W D   ++N  PS F P     G    E    Q QPHSSDLRDAL D+        ES++LG  T+W SR+ VPKP GVEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATSE+AN AI+TMHRFEFKHGRFLGVLPSDENRTLFVGGL+EEWSCAYICQLL+EKMPGLRKVEPIPDRED FKIRTFCFLEFASHAEAA IFNRHQTSPR  L +      XXXXXXXX  G T+                    +  ERD  R+  +ST  TS G+  A                                                    GGG +                                                  DG GA    GVPLVVGGATLKVDWADPLRYHIHLNGGIKGPSAPPE G+ +GRP+SRG
Sbjct:    1 MAPRQVFPYDECGVLRTPRQLLAESQXXXXXXXXXXXXXXXHQREPWLD---LDN--PSPFTPTFDESGSSGGEAGCVQ-QPHSSDLRDALKDDXXX---XXESLDLG--TAWASREFVPKP-GVEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATSEQANLAIETMHRFEFKHGRFLGVLPSDENRTLFVGGLQEEWSCAYICQLLKEKMPGLRKVEPIPDREDRFKIRTFCFLEFASHAEAAVIFNRHQTSPR--LPQPXXXXXXXXXXXXXXQGPTTELSLPLXXXXXXXXXXXXAGLRYERDARRESRSSTTCTSAGDNAAD---------------------------------------------------GGGEK--------------------------------------------------DGTGA----GVPLVVGGATLKVDWADPLRYHIHLNGGIKGPSAPPESGVQNGRPASRG 390
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BLAST of mRNA_H-canaliculatus_F_contig1399.3157.1 vs. uniprot
Match: D7FYA2_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYA2_ECTSI)

HSP 1 Score: 273 bits (698), Expect = 1.160e-82
Identity = 163/233 (69.96%), Postives = 174/233 (74.68%), Query Frame = 1 
Query:   46 MAPRQVIPYDEGGG-RTSRQLLFETQQQXR--------QRHQQ--QWADPAAVENELPSCFAPP----GIGRREDFEHQEQPHSSDLRDALGDEDDEDDDGGESVELGAPTSWVSRDLVPKPPGVEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATSEEANRAIDTMHRFEFKHGRFLGVLPSDENRTLFVGGLREEWSCAYICQLLQEKMPGL 699
            MAPRQV PY E G  RT RQLL E+QQQ R        ++H+Q  QWAD      + PS F P     G    E    Q QPH SDLRDAL D D       ES++LGA   W SR+ VPKP GVEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATSE+ANRAIDTMHRFEFKHGRFLGVLPSDENRTLFVGGL+EEWSCAYICQLL+EKM  L
Sbjct:    1 MAPRQVFPYHECGVLRTPRQLLAESQQQQRKELESXXXEQHRQGEQWAD-----IDKPSPFTPTFDESGSSGGEAACVQ-QPHCSDLRDALND-DXXXXXXXESLDLGA--VWASREFVPKP-GVEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATSEQANRAIDTMHRFEFKHGRFLGVLPSDENRTLFVGGLQEEWSCAYICQLLKEKMVRL 223
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BLAST of mRNA_H-canaliculatus_F_contig1399.3157.1 vs. uniprot
Match: A0A836CJD8_9STRA (RRM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJD8_9STRA)

HSP 1 Score: 163 bits (413), Expect = 4.120e-38
Identity = 85/190 (44.74%), Postives = 113/190 (59.47%), Query Frame = 1 
Query:  364 PPGVEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATSEEANRAIDTMHRFEFKHGRFLGVLPSDENRTLFVGGLREEWSCAYICQLLQEKMPGLRK--------------------------VEPIPDREDPFKIRTFCFLEFASHAEAAAIFNRHQTSPRPALQRASSVPP 855
            PPGVEIFVGGLTR++  +ML DWF H GE+TEVR+ARDKRRRRCRGYG+VRF  SE+AN AI+ M  ++FK G +LG+LPSDENRTL+V G+ + WS   +         G+++                          ++ + DRE P ++R FCF+EF +H  A +   R+     P   R SS  P
Sbjct:  231 PPGVEIFVGGLTRASSAEMLYDWFCHLGEITEVRVARDKRRRRCRGYGFVRFRNSEQANLAIEAMQGYQFKKGCYLGMLPSDENRTLYVSGMCQSWSQDQVHAYFSANFEGVKRQVELCAARDAAARRAPLCWRRVASIRMQLVWDRETPSRLRPFCFVEFDTHEHATSAHARYH----PDSDRGSSDSP 416
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BLAST of mRNA_H-canaliculatus_F_contig1399.3157.1 vs. uniprot
Match: A0A836CKV5_9STRA (RRM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKV5_9STRA)

HSP 1 Score: 163 bits (412), Expect = 8.540e-38
Identity = 84/180 (46.67%), Postives = 113/180 (62.78%), Query Frame = 1 
Query:  346 RDLVPKP----PGVEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATSEEANRAIDTMHRFEFKHGRFLG-------------------VLPSDENRTLFVGGLREEWSCAYICQLLQEKMPGLRKVEPIPDREDPFKIRTFCFLEFASHAEAAAIFNRHQTS 816
            R + P P    PGVEIFVGGLTRS+ R++L D F H G++TEVRIARDKRRRRCRGYG+VRF TSE+AN A+++M  F+FK G +L                    VLPSDENRTL+  G+ E+ S   +C  L     G++++  +  +ED  K+R FCF+EF ++ +AA     H+ S
Sbjct:  142 RSMSPPPGQPCPGVEIFVGGLTRSSTRELLYDCFSHIGDITEVRIARDKRRRRCRGYGFVRFRTSEQANMAVESMQAFQFKRGCYLSALLNAKKIAXXXXXXXXXXVLPSDENRTLYACGIEEDVSPDAVCWFLTRSFEGIKRIHLMWGKEDVCKLRPFCFIEFHTNEQAAVALLSHRQS 321
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BLAST of mRNA_H-canaliculatus_F_contig1399.3157.1 vs. uniprot
Match: D8RBK0_SELML (Uncharacterized protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RBK0_SELML)

HSP 1 Score: 105 bits (263), Expect = 2.580e-20
Identity = 64/192 (33.33%), Postives = 106/192 (55.21%), Query Frame = 1 
Query:  208 IGRREDFEHQEQPHSSDLRDALGDEDDEDDDGGESVELGAPTSWVSRDLVPKPP-GVEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATSEEANRAIDTMHRFEFKHGRFLGVLPSDENRTLFVGGLREEWSCAYICQLLQEKMPGLRKVEPIPDREDPFKIRTFCFLEFASHA 780
            +   ED   +++ +++D  + L + ++   D GESV++       ++ L+ +PP G E+F+GG+TR T  D LR+     GE+ EVRI +DK     +GY +V +   E A +AI+T+   E K GR L    S     LF+G + + W    + ++L E+ PG+  VE + D  +P K R F F+E+ +HA
Sbjct:   48 LDMNEDEGGEDEAYTTDHENGLQNGENASADLGESVDVDDDEE--TKSLLSRPPHGSEVFIGGVTRDTNEDDLRELCSPCGEIFEVRILKDKETGNNKGYAFVTYTNRETAEKAIETLANSELK-GRKLRFSHSQAKHRLFIGNIPKSWDTPELEKILAEEGPGVEGVELLKDPRNPGKNRGFAFVEYYNHA 236
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BLAST of mRNA_H-canaliculatus_F_contig1399.3157.1 vs. uniprot
Match: UPI001CC6ABC6 (heterogeneous nuclear ribonucleoprotein Q-like n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC6ABC6)

HSP 1 Score: 101 bits (252), Expect = 6.590e-19
Identity = 50/137 (36.50%), Postives = 82/137 (59.85%), Query Frame = 1 
Query:  370 GVEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATSEEANRAIDTMHRFEFKHGRFLGVLPSDENRTLFVGGLREEWSCAYICQLLQEKMPGLRKVEPIPDREDPFKIRTFCFLEFASHA 780
            G EIF+GGL R    D LRD  +  G ++E+R+ +DK R   +GY +V F + + A +AI+ +H  EFK GR L    S     LF+G + + WS A + ++++E  PG+  +E + D ++P + R F F+E+ ++A
Sbjct:  104 GSEIFIGGLPREVTEDDLRDLCEPIGNISEIRLMKDKDRGESKGYAFVTFNSKDLAKKAIEELHNKEFK-GRTLRCSLSQTKHRLFIGNIPKSWSEAELRKVIEENGPGVENIELLKDPQNPSRNRGFAFIEYYNNA 239
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BLAST of mRNA_H-canaliculatus_F_contig1399.3157.1 vs. uniprot
Match: A9STT2_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9STT2_PHYPA)

HSP 1 Score: 96.3 bits (238), Expect = 3.040e-18
Identity = 57/149 (38.26%), Postives = 83/149 (55.70%), Query Frame = 1 
Query:  373 VEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATSEEANRAIDTMHRFEFKHGRFLGVLPSDENRTLFVGGLREEWSCAYICQLLQEKMPGLRKVEPIPDREDPFKI---RTFCFLEFASHAEAAAIFNRHQ 810
            +E+FVGGL + T  + L   F   G+V EVR+ ++ +  + +GY ++RFA++  A RA   + R E + GR  GVLPS+EN TLF+G + + W    + + L  K   +  VE I   EDP      R F F+EF +H EA   F R Q
Sbjct:   18 LEVFVGGLDKETTEEELESVFGRVGDVVEVRLMKNAQTGKNKGYAFIRFASAAIAKRASHDLERVEIR-GRSCGVLPSEENDTLFLGNISKLWKKETVLETL--KKFAIENVEDITLMEDPQLEGVNRGFAFIEFNTHKEALNAFRRLQ 163
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BLAST of mRNA_H-canaliculatus_F_contig1399.3157.1 vs. uniprot
Match: A0A7C9F016_OPUST (Uncharacterized protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9F016_OPUST)

HSP 1 Score: 100 bits (248), Expect = 5.480e-18
Identity = 55/146 (37.67%), Postives = 82/146 (56.16%), Query Frame = 1 
Query:  376 EIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATSEEANRAIDTMHRFEFKHGRFLGVLPSDENRTLFVGGLREEWSCAYICQLLQE-KMPGLRKVEPIPDREDPFKIRTFCFLEFASHAEAAAIFNRHQ 810
            EIFVGGL R    D L+  F+  GEV EVR+ +D    + RG+ +VRFAT ++A RA+  M     + G+  G  P+++N TLFVG +   W+   I Q L++  + G+  +  + D       R FCF++FA HA+A   + R Q
Sbjct:  335 EIFVGGLDREVVEDDLKKAFEKVGEVVEVRLLKDPLTNKNRGFAFVRFATKDQAKRALSEMKNPVIR-GKRCGTAPNEDNDTLFVGNICNTWTKEAIKQKLKDYSVEGVENITLVQDPRHEGLSRGFCFIQFACHADAMFAYKRLQ 479
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BLAST of mRNA_H-canaliculatus_F_contig1399.3157.1 vs. uniprot
Match: A0A803NC05_CHEQI (Uncharacterized protein n=2 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803NC05_CHEQI)

HSP 1 Score: 100 bits (249), Expect = 5.500e-18
Identity = 74/223 (33.18%), Postives = 110/223 (49.33%), Query Frame = 1 
Query:  157 DPAAVENELPSCFAPPGIGRREDFEHQEQPHSSDLRDALGDEDDEDDDGGE----SVELGAPTSWVSRDLVPKPPGVEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATSEEANRAIDTMHRFEFKHGRFLGVLPSDENRTLFVGGLREEWSCAYICQLLQE-KMPGLRKVEPIPDREDPFKIRTFCFLEFASHAEAAAIFNRHQ 810
            D  A E++     A  GI    D E   +P   DL+     EDDE + G E     VE     +      V K   +EIFVGGL R    D ++  F+  GEV EVR+ +D    + RG+ +VRFAT ++A RA+  M     + G+  G  P+++N TLF+G +   W+   I Q L++  + G+  +  + D       R FCF++FA HA+A   + R Q
Sbjct:  481 DEQAAESKQDEACATGGIEEYGDEEGFVEPGDEDLQ-----EDDEPETGDEMKALEVEHKELAAAAKERKVKKE--LEIFVGGLDREVIEDDVKKTFEKVGEVVEVRLLKDTLTNKNRGFAFVRFATKDQAKRALSEMKNPVIR-GKRCGTAPNEDNDTLFLGNVCNTWTKEAIKQKLKDYSVEGVENITLVQDPRHEGLSRGFCFIQFACHADAMFAYKRLQ 695
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BLAST of mRNA_H-canaliculatus_F_contig1399.3157.1 vs. uniprot
Match: A0A803NB38_CHEQI (Uncharacterized protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803NB38_CHEQI)

HSP 1 Score: 98.2 bits (243), Expect = 1.270e-17
Identity = 53/147 (36.05%), Postives = 83/147 (56.46%), Query Frame = 1 
Query:  373 VEIFVGGLTRSTRRDMLRDWFQHAGEVTEVRIARDKRRRRCRGYGYVRFATSEEANRAIDTMHRFEFKHGRFLGVLPSDENRTLFVGGLREEWSCAYICQLLQE-KMPGLRKVEPIPDREDPFKIRTFCFLEFASHAEAAAIFNRHQ 810
            +EIFVGGL R    D ++  F+  GEV EVR+ +D    + RG+ +VRFAT ++A RA+  M     + G+  G  P+++N TLF+G +   W+   I Q L++  + G+  +  + D       R FCF++FA HA+A   + R Q
Sbjct:  253 LEIFVGGLDREVIEDDVKKTFEKVGEVVEVRLLKDTLTNKNRGFAFVRFATKDQAKRALSEMKNPVIR-GKRCGTAPNEDNDTLFLGNVCNTWTKEAIKQKLKDYSVEGVENITLVQDPRHEGLSRGFCFIQFACHADAMFAYKRLQ 398
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1399.3157.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9D0_9PHAE2.600e-11853.44RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FYA2_ECTSI1.160e-8269.96RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CJD8_9STRA4.120e-3844.74RRM domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A836CKV5_9STRA8.540e-3846.67RRM domain-containing protein n=1 Tax=Tribonema mi... [more]
D8RBK0_SELML2.580e-2033.33Uncharacterized protein n=2 Tax=Selaginella moelle... [more]
UPI001CC6ABC66.590e-1936.50heterogeneous nuclear ribonucleoprotein Q-like n=1... [more]
A9STT2_PHYPA3.040e-1838.26Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A7C9F016_OPUST5.480e-1837.67Uncharacterized protein (Fragment) n=1 Tax=Opuntia... [more]
A0A803NC05_CHEQI5.500e-1833.18Uncharacterized protein n=2 Tax=Chenopodium quinoa... [more]
A0A803NB38_CHEQI1.270e-1736.05Uncharacterized protein n=1 Tax=Chenopodium quinoa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1399contigH-canaliculatus_F_contig1399:2601..5907 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score274.2
Seed ortholog evalue1.8e-70
Seed eggNOG ortholog2880.D7FYA2
EggNOG free text desc.cytidine to uridine editing
EggNOG OGsKOG0117@1,KOG0117@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRNA recognition motif domain
Ec32 orthologEc-24_003230.1
Exons2
Model size2336
Cds size2334
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929143.7329652-CDS-H-canaliculatus_F_contig1399:2602..42461622929143.7329652-CDS-H-canaliculatus_F_contig1399:2602..4246Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1399 2603..4246 -
1696845694.2482395-CDS-H-canaliculatus_F_contig1399:2602..42461696845694.2482395-CDS-H-canaliculatus_F_contig1399:2602..4246Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1399 2603..4246 -
1622929143.7459447-CDS-H-canaliculatus_F_contig1399:5217..59071622929143.7459447-CDS-H-canaliculatus_F_contig1399:5217..5907Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1399 5218..5907 -
1696845694.2598376-CDS-H-canaliculatus_F_contig1399:5217..59071696845694.2598376-CDS-H-canaliculatus_F_contig1399:5217..5907Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1399 5218..5907 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1399.3157.1prot_H-canaliculatus_F_contig1399.3157.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1399 2603..5907 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1399.3157.1

>prot_H-canaliculatus_F_contig1399.3157.1 ID=prot_H-canaliculatus_F_contig1399.3157.1|Name=mRNA_H-canaliculatus_F_contig1399.3157.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=778bp
HQSADGEGTTRQCFAMAPRQVIPYDEGGGRTSRQLLFETQQQQRQRHQQQ
WADPAAVENELPSCFAPPGIGRREDFEHQEQPHSSDLRDALGDEDDEDDD
GGESVELGAPTSWVSRDLVPKPPGVEIFVGGLTRSTRRDMLRDWFQHAGE
VTEVRIARDKRRRRCRGYGYVRFATSEEANRAIDTMHRFEFKHGRFLGVL
PSDENRTLFVGGLREEWSCAYICQLLQEKMPGLRKVEPIPDREDPFKIRT
FCFLEFASHAEAAAIFNRHQTSPRPALQRASSVPPQQAPPPPPDPGATSL
ELQASPPSRVSGAGVDGVDVFLERDNRDGSTSTGDTSGGEFFASGARAPA
PSSPDHDGGDSAGGLLHFEASGLSSVWGQRRLGAEVEDRVACGAGGGGLR
LSEDGFPSWSDAPAAAHTATATATATAATPEESGYLSAAGGGGGTGGGND
DGVGANTARGVPLVVGGATLKVDWADPLRYHIHLNGGIKGPSAPPEFGML
DGRPSSRGGGGGGGGSGGCGRNVSGNGGCGRPGSGDGGGGRVARCGGAFG
VGRSWQQQQQQQQQQHHQHQHQQEQHQGLTRHPSGPPPQQPPSLSSRWQD
VEHAVHAVQHQHQLHRLHQQRHQQHQQRQCMDTCTACSRGASPVTTRDRG
YTIADVTTGPRGAPFGDEGGDRQRAASSSSSSGGMPPPSRHRHRHRHRPD
EYHQHQHASLHHHHGLLEFTAPRLEVAADREDSGDDGRCLAMPSSWESSE
GRFPPPPPHREAAVAGPASSFRPHQQHP
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mRNA from alignment at H-canaliculatus_F_contig1399:2601..5907-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1399.3157.1 ID=mRNA_H-canaliculatus_F_contig1399.3157.1|Name=mRNA_H-canaliculatus_F_contig1399.3157.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3307bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1399:2601..5907- (Hapterophycus canaliculatus Oshoro5f female)
CACCAAAGCGCAGACGGAGAAGGCACAACCCGTCAGTGCTTTGCGATGGC
ACCCCGGCAGGTCATCCCTTACGACGAGGGCGGGGGTCGCACGTCTCGGC
AGCTGCTCTTCGAGACGCAGCAGCAGCAGCGGCAACGGCACCAGCAGCAA
TGGGCCGATCCTGCAGCAGTCGAAAACGAGCTGCCATCCTGCTTTGCTCC
GCCAGGTATCGGCAGGAGGGAGGACTTTGAGCATCAGGAGCAGCCGCACA
GCAGTGACCTGCGCGACGCGCTCGGCGACGAGGACGACGAAGACGACGAT
GGAGGCGAGAGCGTGGAGTTGGGAGCACCCACTAGCTGGGTGAGCCGCGA
CTTGGTGCCCAAGCCTCCAGGGGTAGAGATTTTCGTCGGAGGCTTGACCA
GAAGCACTCGGCGCGACATGCTCCGCGATTGGTTCCAGCACGCGGGGGAG
GTGACAGAGGTTCGCATCGCGCGAGACAAGCGGCGCCGCAGGTGCCGTGG
GTACGGGTACGTACGCTTCGCCACGAGCGAGGAGGCCAACAGGGCCATCG
ACACCATGCACCGCTTCGAGTTCAAGCACGGCAGGTTCCTTGGCGTCTTG
CCCTCGGACGAAAATCGGACGCTCTTCGTGGGTGGCCTTCGGGAGGAGTG
GAGCTGCGCCTACATTTGCCAGCTGCTCCAAGAAAAGATGGTGAGGCAGC
GTGGGTTAGACGTTGCGTGCGGATATCTCCTGTATTGACAGATCGCGCGC
AACAGCGCTAGCCACCAGTATGCGCCGGAAAAATCGAAATAAGGCGGTCC
GGCGGCATGTTCGCCTCATTCGCTGGTAAATGTTTCGCCCACCCCCCTGC
GAAAAATCCACCGTAGAGAAATCGCCGCTCCTTTTACAAGTATCTCACTC
TTTCTCCTTCCCGTCTCTCGAGTTAAGGGGTGAGGGGTCAGGAGCAGGCG
CGCGCCCTCAAGCTCCGCTCGTGAAGGCGATGTACCGCACGCCACCGGGC
GGCTCTTCGCCGCCCACTCGATCTGCCTAACCACACCGAATACTTGTAGT
TGCAGGCGGCGATCTTCAACGGCAGTCGACCGTCAACCGTAACTTTCGAC
GTGTCCTCTGTTTGAAGTTAAGATTGATAAGATCACCCCGCCGGGGCGGG
GCGGACCTGAAGTATTTCCTCTCGCCCGGTCGGCCGAAATTATGGAGCCA
TCGATGCGAGTTCGGGATTGAAGGCGGATTCCATGGATGTTAGGTGGCAT
CATCTTCACCTCGACGGGAATGGTTGCCTAGATCCCGATGGAGTCGCTCT
CGTCCACAACTTGTTGTAGGCGCGGAAGCTGCCTCGATGCTTTCTCGTTG
CTCCTTCTGTCCGAACAGCATTATTATTGTGCCGCAGCGGCAGTAGCACG
GCAGCAACCCCGCAGCAGAGCCACAGCGTACTAGTCAGATGGTGGAGAAG
CGGGCGCGCAATCTATTCTCCGTATTTTCGTTCTCAGAATGGTTGGAGAT
GCCACGCCGGACCAACAGGCGAGCGTGACTAAACTCCTGAGCACGGCACC
TTCCCCCCCGCCCCCGCCCGTCCACAACCGTCCTTCTCCGTCCTCATGCG
CTCCCTGCGCTCGGCCCCGAATCCCCGCTCCCATTGCTTCCTCGGCGCTG
AAACAAAAAAGCCTGGTTTGAGGAAAGTCGAGCCGATCCCGGATCGGGAG
GACCCTTTTAAGATCCGCACCTTTTGCTTCCTGGAGTTCGCCTCGCACGC
CGAGGCGGCGGCGATATTCAACCGGCACCAGACCAGCCCTCGGCCGGCGC
TCCAGCGAGCCTCGTCGGTGCCGCCCCAGCAGGCGCCGCCCCCGCCCCCG
GACCCGGGTGCGACGAGCCTGGAGCTGCAAGCATCTCCGCCGTCGCGCGT
CAGCGGGGCAGGTGTTGATGGTGTAGACGTGTTCTTGGAACGCGACAATC
GGGACGGGAGCACGAGCACCGGTGACACATCCGGCGGCGAGTTTTTCGCT
TCCGGCGCGAGGGCCCCCGCCCCCTCCAGCCCGGACCACGACGGCGGGGA
TTCGGCCGGCGGGTTGCTCCACTTCGAGGCGAGCGGCCTCAGCAGCGTCT
GGGGCCAGCGGCGCCTGGGAGCGGAGGTTGAAGACCGCGTCGCGTGTGGC
GCCGGGGGCGGCGGGCTCCGCCTCTCGGAAGACGGCTTCCCGTCTTGGAG
CGATGCTCCGGCAGCTGCTCACACGGCGACAGCGACAGCAACAGCAACAG
CTGCGACCCCCGAGGAAAGTGGCTACCTCAGCGCCGCAGGCGGGGGTGGA
GGCACAGGCGGCGGCAACGACGATGGGGTCGGAGCCAACACGGCGAGGGG
CGTCCCGCTGGTCGTCGGCGGGGCTACCCTCAAAGTCGACTGGGCAGACC
CGCTGCGATACCACATCCACCTCAACGGCGGCATCAAGGGTCCGTCAGCC
CCTCCGGAATTCGGTATGCTTGATGGCCGCCCATCCTCACGCGGCGGCGG
CGGCGGCGGCGGCGGCAGCGGCGGCTGCGGTCGAAACGTTTCCGGTAACG
GCGGCTGCGGGCGTCCTGGTTCTGGCGACGGAGGAGGGGGAAGAGTTGCC
CGTTGCGGGGGTGCTTTCGGTGTTGGGCGAAGCTGGCAGCAACAGCAGCA
GCAGCAGCAGCAACAGCACCACCAGCACCAGCACCAGCAAGAACAGCACC
AGGGCCTGACTCGGCACCCGTCTGGGCCTCCGCCGCAGCAGCCACCGTCT
CTCTCGTCCCGTTGGCAAGACGTGGAGCACGCCGTGCATGCTGTCCAGCA
CCAGCACCAGCTGCACCGCCTCCACCAACAGCGCCACCAACAGCACCAGC
AGCGGCAATGCATGGACACCTGCACCGCCTGCAGCAGGGGCGCCTCACCA
GTGACGACCCGGGACCGCGGGTACACCATCGCTGACGTCACCACGGGGCC
CCGGGGAGCACCTTTCGGCGACGAAGGCGGTGACAGGCAACGCGCGGCGT
CGTCGTCGTCGTCCAGCGGCGGAATGCCACCGCCGTCCCGCCACCGCCAC
CGCCACCGCCACCGCCCCGACGAGTACCACCAGCACCAGCACGCCTCCCT
ACACCATCACCACGGCCTTTTGGAGTTCACCGCTCCGCGGTTGGAGGTGG
CAGCCGATCGCGAGGACTCTGGCGATGATGGTCGGTGCCTCGCCATGCCC
TCCTCCTGGGAGTCTTCAGAAGGTCGCTTTCCTCCTCCGCCGCCTCACCG
TGAGGCCGCGGTGGCAGGGCCGGCGTCAAGTTTTCGACCCCACCAGCAGC
ATCCTCT
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1399:2601..5907-

>mRNA_H-canaliculatus_F_contig1399.3157.1 ID=mRNA_H-canaliculatus_F_contig1399.3157.1|Name=mRNA_H-canaliculatus_F_contig1399.3157.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=4668bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1399:2601..5907- (Hapterophycus canaliculatus Oshoro5f female)
CACCAAAGCGCAGACGGAGAAGGCACAACCCGTCAGTGCTTTGCGATGGC
ACCCCGGCAGGTCATCCCTTACGACGAGGGCGGGGGTCGCACGTCTCGGC
AGCTGCTCTTCGAGACGCAGCAGCAGCAGCGGCAACGGCACCAGCAGCAA
TGGGCCGATCCTGCAGCAGTCGAAAACGAGCTGCCATCCTGCTTTGCTCC
GCCAGGTATCGGCAGGAGGGAGGACTTTGAGCATCAGGAGCAGCCGCACA
GCAGTGACCTGCGCGACGCGCTCGGCGACGAGGACGACGAAGACGACGAT
GGAGGCGAGAGCGTGGAGTTGGGAGCACCCACTAGCTGGGTGAGCCGCGA
CTTGGTGCCCAAGCCTCCAGGGGTAGAGATTTTCGTCGGAGGCTTGACCA
GAAGCACTCGGCGCGACATGCTCCGCGATTGGTTCCAGCACGCGGGGGAG
GTGACAGAGGTTCGCATCGCGCGAGACAAGCGGCGCCGCAGGTGCCGTGG
GTACGGGTACGTACGCTTCGCCACGAGCGAGGAGGCCAACAGGGCCATCG
ACACCATGCACCGCTTCGAGTTCAAGCACGGCAGGTTCCTTGGCGTCTTG
CCCTCGGACGAAAATCGGACGCTCTTCGTGGGTGGCCTTCGGGAGGAGTG
GAGCTGCGCCTACATTTGCCAGCTGCTCCAAGAAAAGATGCACCAAAGCG
CAGACGGAGAAGGCACAACCCGTCAGTGCTTTGCGATGGCACCCCGGCAG
GTCATCCCTTACGACGAGGGCGGGGGTCGCACGTCTCGGCAGCTGCTCTT
CGAGACGCAGCAGCAGCAGCGGCAACGGCACCAGCAGCAATGGGCCGATC
CTGCAGCAGTCGAAAACGAGCTGCCATCCTGCTTTGCTCCGCCAGGTATC
GGCAGGAGGGAGGACTTTGAGCATCAGGAGCAGCCGCACAGCAGTGACCT
GCGCGACGCGCTCGGCGACGAGGACGACGAAGACGACGATGGAGGCGAGA
GCGTGGAGTTGGGAGCACCCACTAGCTGGGTGAGCCGCGACTTGGTGCCC
AAGCCTCCAGGGGTAGAGATTTTCGTCGGAGGCTTGACCAGAAGCACTCG
GCGCGACATGCTCCGCGATTGGTTCCAGCACGCGGGGGAGGTGACAGAGG
TTCGCATCGCGCGAGACAAGCGGCGCCGCAGGTGCCGTGGGTACGGGTAC
GTACGCTTCGCCACGAGCGAGGAGGCCAACAGGGCCATCGACACCATGCA
CCGCTTCGAGTTCAAGCACGGCAGGTTCCTTGGCGTCTTGCCCTCGGACG
AAAATCGGACGCTCTTCGTGGGTGGCCTTCGGGAGGAGTGGAGCTGCGCC
TACATTTGCCAGCTGCTCCAAGAAAAGATGCCTGGTTTGAGGAAAGTCGA
GCCGATCCCGGATCGGGAGGACCCTTTTAAGATCCGCACCTTTTGCTTCC
TGGAGTTCGCCTCGCACGCCGAGGCGGCGGCGATATTCAACCGGCACCAG
ACCAGCCCTCGGCCGGCGCTCCAGCGAGCCTCGTCGGTGCCGCCCCAGCA
GGCGCCGCCCCCGCCCCCGGACCCGGGTGCGACGAGCCTGGAGCTGCAAG
CATCTCCGCCGTCGCGCGTCAGCGGGGCAGGTGTTGATGGTGTAGACGTG
TTCTTGGAACGCGACAATCGGGACGGGAGCACGAGCACCGGTGACACATC
CGGCGGCGAGTTTTTCGCTTCCGGCGCGAGGGCCCCCGCCCCCTCCAGCC
CGGACCACGACGGCGGGGATTCGGCCGGCGGGTTGCTCCACTTCGAGGCG
AGCGGCCTCAGCAGCGTCTGGGGCCAGCGGCGCCTGGGAGCGGAGGTTGA
AGACCGCGTCGCGTGTGGCGCCGGGGGCGGCGGGCTCCGCCTCTCGGAAG
ACGGCTTCCCGTCTTGGAGCGATGCTCCGGCAGCTGCTCACACGGCGACA
GCGACAGCAACAGCAACAGCTGCGACCCCCGAGGAAAGTGGCTACCTCAG
CGCCGCAGGCGGGGGTGGAGGCACAGGCGGCGGCAACGACGATGGGGTCG
GAGCCAACACGGCGAGGGGCGTCCCGCTGGTCGTCGGCGGGGCTACCCTC
AAAGTCGACTGGGCAGACCCGCTGCGATACCACATCCACCTCAACGGCGG
CATCAAGGGTCCGTCAGCCCCTCCGGAATTCGGTATGCTTGATGGCCGCC
CATCCTCACGCGGCGGCGGCGGCGGCGGCGGCGGCAGCGGCGGCTGCGGT
CGAAACGTTTCCGGTAACGGCGGCTGCGGGCGTCCTGGTTCTGGCGACGG
AGGAGGGGGAAGAGTTGCCCGTTGCGGGGGTGCTTTCGGTGTTGGGCGAA
GCTGGCAGCAACAGCAGCAGCAGCAGCAGCAACAGCACCACCAGCACCAG
CACCAGCAAGAACAGCACCAGGGCCTGACTCGGCACCCGTCTGGGCCTCC
GCCGCAGCAGCCACCGTCTCTCTCGTCCCGTTGGCAAGACGTGGAGCACG
CCGTGCATGCTGTCCAGCACCAGCACCAGCTGCACCGCCTCCACCAACAG
CGCCACCAACAGCACCAGCAGCGGCAATGCATGGACACCTGCACCGCCTG
CAGCAGGGGCGCCTCACCAGTGACGACCCGGGACCGCGGGTACACCATCG
CTGACGTCACCACGGGGCCCCGGGGAGCACCTTTCGGCGACGAAGGCGGT
GACAGGCAACGCGCGGCGTCGTCGTCGTCGTCCAGCGGCGGAATGCCACC
GCCGTCCCGCCACCGCCACCGCCACCGCCACCGCCCCGACGAGTACCACC
AGCACCAGCACGCCTCCCTACACCATCACCACGGCCTTTTGGAGTTCACC
GCTCCGCGGTTGGAGGTGGCAGCCGATCGCGAGGACTCTGGCGATGATGG
TCGGTGCCTCGCCATGCCCTCCTCCTGGGAGTCTTCAGAAGGTCGCTTTC
CTCCTCCGCCGCCTCACCGTGAGGCCGCGGTGGCAGGGCCGGCGTCAAGT
TTTCGACCCCACCAGCAGCATCCTCCTGGTTTGAGGAAAGTCGAGCCGAT
CCCGGATCGGGAGGACCCTTTTAAGATCCGCACCTTTTGCTTCCTGGAGT
TCGCCTCGCACGCCGAGGCGGCGGCGATATTCAACCGGCACCAGACCAGC
CCTCGGCCGGCGCTCCAGCGAGCCTCGTCGGTGCCGCCCCAGCAGGCGCC
GCCCCCGCCCCCGGACCCGGGTGCGACGAGCCTGGAGCTGCAAGCATCTC
CGCCGTCGCGCGTCAGCGGGGCAGGTGTTGATGGTGTAGACGTGTTCTTG
GAACGCGACAATCGGGACGGGAGCACGAGCACCGGTGACACATCCGGCGG
CGAGTTTTTCGCTTCCGGCGCGAGGGCCCCCGCCCCCTCCAGCCCGGACC
ACGACGGCGGGGATTCGGCCGGCGGGTTGCTCCACTTCGAGGCGAGCGGC
CTCAGCAGCGTCTGGGGCCAGCGGCGCCTGGGAGCGGAGGTTGAAGACCG
CGTCGCGTGTGGCGCCGGGGGCGGCGGGCTCCGCCTCTCGGAAGACGGCT
TCCCGTCTTGGAGCGATGCTCCGGCAGCTGCTCACACGGCGACAGCGACA
GCAACAGCAACAGCTGCGACCCCCGAGGAAAGTGGCTACCTCAGCGCCGC
AGGCGGGGGTGGAGGCACAGGCGGCGGCAACGACGATGGGGTCGGAGCCA
ACACGGCGAGGGGCGTCCCGCTGGTCGTCGGCGGGGCTACCCTCAAAGTC
GACTGGGCAGACCCGCTGCGATACCACATCCACCTCAACGGCGGCATCAA
GGGTCCGTCAGCCCCTCCGGAATTCGGTATGCTTGATGGCCGCCCATCCT
CACGCGGCGGCGGCGGCGGCGGCGGCGGCAGCGGCGGCTGCGGTCGAAAC
GTTTCCGGTAACGGCGGCTGCGGGCGTCCTGGTTCTGGCGACGGAGGAGG
GGGAAGAGTTGCCCGTTGCGGGGGTGCTTTCGGTGTTGGGCGAAGCTGGC
AGCAACAGCAGCAGCAGCAGCAGCAACAGCACCACCAGCACCAGCACCAG
CAAGAACAGCACCAGGGCCTGACTCGGCACCCGTCTGGGCCTCCGCCGCA
GCAGCCACCGTCTCTCTCGTCCCGTTGGCAAGACGTGGAGCACGCCGTGC
ATGCTGTCCAGCACCAGCACCAGCTGCACCGCCTCCACCAACAGCGCCAC
CAACAGCACCAGCAGCGGCAATGCATGGACACCTGCACCGCCTGCAGCAG
GGGCGCCTCACCAGTGACGACCCGGGACCGCGGGTACACCATCGCTGACG
TCACCACGGGGCCCCGGGGAGCACCTTTCGGCGACGAAGGCGGTGACAGG
CAACGCGCGGCGTCGTCGTCGTCGTCCAGCGGCGGAATGCCACCGCCGTC
CCGCCACCGCCACCGCCACCGCCACCGCCCCGACGAGTACCACCAGCACC
AGCACGCCTCCCTACACCATCACCACGGCCTTTTGGAGTTCACCGCTCCG
CGGTTGGAGGTGGCAGCCGATCGCGAGGACTCTGGCGATGATGGTCGGTG
CCTCGCCATGCCCTCCTCCTGGGAGTCTTCAGAAGGTCGCTTTCCTCCTC
CGCCGCCTCACCGTGAGGCCGCGGTGGCAGGGCCGGCGTCAAGTTTTCGA
CCCCACCAGCAGCATCCT
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