mRNA_H-canaliculatus_F_contig1397.3143.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1397.3143.1
Unique NamemRNA_H-canaliculatus_F_contig1397.3143.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig1397.3143.1 vs. uniprot
Match: D7G6A9_ECTSI (Guanylate kinase-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6A9_ECTSI)

HSP 1 Score: 862 bits (2228), Expect = 8.340e-311
Identity = 457/598 (76.42%), Postives = 502/598 (83.95%), Query Frame = 1
Query:    1 MSRCRAHAVGIFLLATGATGWNFVAPRMSTMSPAHKQPVRRSGLPGIHARRHRRLPYSPHDYGLGYRVRSDARSRLGSSSLGTMKQEPVPGKDHEGENVADLEPRPFPKVGDVVRYEGKWENEVSFGEVRQLKKVEETGEWRAYVLPLESIGDDQYARKKNQKSKAEDAATLRPVRAFYVRNVDGFKVMHNSATREPRYISDAYELEGFELPKIEVDPVKFAAELESYEDLKRRLVVDAALFGAVGAFVTLQIFGANQGLLFALGALASVAYVILLEKTADDVASGKQDVATKLKGDARFAVPVLLVVTLALKNYVADPGGVVLFKLIPKEEFAAAMIGFIAPARLPLLYREFKSSLRGDEVLDMLPGSLGQGRAILRNMGEPTGAPTSVGEETAGPSLTRVIVVSGPKCLGKTSLVNKILEEDKRLAQPAWCTTRPIRASEAEGQEVFFMKQVKFEELERKGAFLHVYKDSKGESYGLRLEDISAIAEEGKVCIVDANMNIVRALTGVGELALIGVWVSLDSIEAIEERIRTTLISTGAA-DEPDLDADVRGLVRQAVEDIEFGVMSGVFDFTVINNGDVDESMETLRRAVEFATAK 1791
            M R  AH +GI  LA GA  WNF  PRM   S        R  + GI A+R+RRLP +PHD+   Y V   A SRLGSSS              EGE+V DLE RPFPKVGDVVRY+GKWENEVSFGE+RQL+KVEE+G WRAYVL L+SIG+DQYARKKNQKSKAED  TLRPVRAFYVR+VDGFKVMHNS + EPRYISDAYELEGFELPKIEVDPVKFAAELESYEDLKRRLVVDAALFGAVGAF   QIFGA+QGLLFALGALASVAYVILLEKTADDVASGKQDVATKLKGDARFAVPV+LV+ LA KNY+A+P G VLFKLIPK++FAA MIGFIAPARLPLLYRE KSSL+GD+VLDMLPGS+GQGRAILR+MGE +GA      E AGP  TRVIVVSGP+CLGKT+LVNKIL ED RLAQPAWCTTRP+RASE +G++ F  +QVKFEELERKG+FLHVY D  GESYGLR EDISAI E+GKVC+VDA+M +V+ALT VG+LALIGVWVSLDSIEAIEERIRTTLIS GAA D P L+ADVRG+VRQAVEDIE+GVMSGVFDFTVINN D  ESMET+RRAVEFATAK
Sbjct:    1 MVRWGAHVLGILTLAAGAAAWNFALPRMGPSSQLRMASHPR--VSGIQAQRYRRLPSAPHDHRHNYWVSRHATSRLGSSSPDASVA--------EGEDVVDLEARPFPKVGDVVRYKGKWENEVSFGEIRQLRKVEESGGWRAYVLGLDSIGNDQYARKKNQKSKAEDVTTLRPVRAFYVRSVDGFKVMHNSDSGEPRYISDAYELEGFELPKIEVDPVKFAAELESYEDLKRRLVVDAALFGAVGAFAAFQIFGADQGLLFALGALASVAYVILLEKTADDVASGKQDVATKLKGDARFAVPVVLVLALAAKNYLANPDGAVLFKLIPKQDFAAVMIGFIAPARLPLLYREVKSSLKGDDVLDMLPGSIGQGRAILRSMGESSGATADGAVEMAGPQATRVIVVSGPECLGKTTLVNKILAEDSRLAQPAWCTTRPLRASEVDGEDAFSTRQVKFEELERKGSFLHVYTDESGESYGLRFEDISAITEKGKVCVVDADMALVKALTSVGDLALIGVWVSLDSIEAIEERIRTTLISAGAAKDSPTLEADVRGMVRQAVEDIEYGVMSGVFDFTVINNSDEQESMETVRRAVEFATAK 588          
BLAST of mRNA_H-canaliculatus_F_contig1397.3143.1 vs. uniprot
Match: A0A6H5JKB3_9PHAE (Guanylate kinase-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKB3_9PHAE)

HSP 1 Score: 642 bits (1656), Expect = 2.370e-226
Identity = 340/428 (79.44%), Postives = 373/428 (87.15%), Query Frame = 1
Query:  556 FKVMHNSATREPRYISDAYELEGFELPKIEVDPVKFAAELESYEDLKRRLVVDAALFGAVGAFVTLQ---------------IFGANQGLLFALGALASVAYVILLEKTADDVASGKQDVATKLKGDARFAVPVLLVVTLALKNYVADPGGVVLFKLIPKEEFAAAMIGFIAPARLPLLYREFKSSLRGDEVLDMLPGSLGQGRAILRNMGEPTGAPTSVGEETAGPSLTRVIVVSGPKCLGKTSLVNKILEEDKRLAQPAWCTTRPIRASEAEGQEVFFMKQVKFEELERKGAFLHVYKDSKGESYGLRLEDISAIAEEGKVCIVDANMNIVRALTGVGELALIGVWVSLDSIEAIEERIRTTLISTGAA-DEPDLDADVRGLVRQAVEDIEFGVMSGVFDFTVINNGDVDESMETLRRAVEFATAK 1791
            ++VMHNS + EPRYISDAYELEGFELPKIEVDPVKFAAELESYEDLKRRLVVDAALFGAVGAF   Q               IFGA+QGLLFALGALASVAYVILLEKTADDVASGKQDVATKLKGDARFAVPV+LV+ LA KNY+A+P G VLFKLIPK +FAA MIGFIAPARLPLLYRE KSSL+GD+VLDMLPGS+GQGRAILR+MGE +GA      E AGP  TRVIVVSGPKCLGKT+LVNKIL ED RLAQP WCTTRP+RASE +G++ FF +QVKFEELERKG+FLHVYKD  GESYGLRLEDI AIAE+GKVC+VDA+M +V+ALT VG+LALIGVWVSLDSIE+IEERIRTTLIS GAA D P L+ADVRG+VRQAVEDIE+GVMSGVFDFTVINN D +ESMET+RRAVEFAT K
Sbjct:    5 WQVMHNSDSGEPRYISDAYELEGFELPKIEVDPVKFAAELESYEDLKRRLVVDAALFGAVGAFAAFQVGVRYSFLAFMTIYQIFGADQGLLFALGALASVAYVILLEKTADDVASGKQDVATKLKGDARFAVPVVLVLALAAKNYLANPDGAVLFKLIPKHDFAALMIGFIAPARLPLLYREVKSSLKGDDVLDMLPGSIGQGRAILRSMGESSGASADGAVEMAGPQATRVIVVSGPKCLGKTTLVNKILAEDSRLAQPPWCTTRPLRASEVDGKDAFFTRQVKFEELERKGSFLHVYKDESGESYGLRLEDIFAIAEKGKVCVVDADMALVKALTSVGDLALIGVWVSLDSIESIEERIRTTLISAGAAKDSPTLEADVRGMVRQAVEDIEYGVMSGVFDFTVINNSDEEESMETVRRAVEFATTK 432          
BLAST of mRNA_H-canaliculatus_F_contig1397.3143.1 vs. uniprot
Match: A0A835YPD8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPD8_9STRA)

HSP 1 Score: 349 bits (895), Expect = 3.440e-109
Identity = 214/508 (42.13%), Postives = 299/508 (58.86%), Query Frame = 1
Query:  316 PFPKVGDVVRYEGKWENEVSFGEVRQLKKVEETGEWRAYVLPLESIGDDQYARKKNQKSKAEDAATLRPVRAFYVRNVDGFKVMHNSATR-EPRYISDAYELEGFELPKIE-VDPVKFAAELESYEDLKRRLVVDAALFGAVGAFVTLQIFGANQGLLFALGALASVAYVILLEKTADDVASGKQDV-------ATKLKGDARFAVPVLLVVTLALKNYVADPGGVVLFKLIPKEEFAAAMIGFIAPARLPLLYREFKSSLRGDEVLDMLPGSLGQGRAILRNMGEPTGAPTSVGEETAGPSLTRVIVVSGPKCLGKTSLVNKILEEDKRLAQPAWCTTRPIRASEAEGQEVFFMKQVKFEE----LERKGAFLHVYKDSKGESYGLRLEDISAIAEEGKVCIVDANMNIVRALTGVGELALIGVWVSLDSIEAIEERIRTTLIST-GAADEPD-----LDADVRGLVRQAVEDIEFGVMSGVFDFTVINNGDVDESMETLRRAVEFA 1782
            P P++GDVVRY GKW ++VS GE++ L+ +     W A VLPL+ IGD QYAR++   +  ED   LRPVRAFYVR+VD F+V  NS    +  Y    Y ++ FELP    VD       L  YE LK RL+ D  LFGA G+       G  +G +FALGA  + AYV LL + AD + +G            +K     R A+PVLLVV LA  +Y+  PG V LF  +P+ +FAAAM+GF+   RLPLLYRE   +   DE+   +PGSL  G  +LR   +   +  ++   TAGP+   V+VVSGP+ LG+ +LV+K L  +  +  P WCTTRP +  E EG + +F+  V+FEE    +  +  FL V + S GESYGLR  ++      G V +++A+ ++V+ L  +  + +IGVWVSLDS+ AIE R+R  L    G A + D     LD +V G  +QAVEDIEFGV S +F+FT+I+  D + S+  L++A+ +A
Sbjct:   94 PEPQIGDVVRYPGKWADDVSLGEIKGLQYIAARNTWIADVLPLKEIGDGQYARRRGWGTNVEDVEKLRPVRAFYVRSVDAFQVRTNSDDPGDLVYAGPCYNIKDFELPPPPPVDSASAEMSLAEYEALKVRLLRDTLLFGAAGSVAAALAVGIEEGAVFALGAATAAAYVALLGRNADKIGTGGDSTLSAGRSRGSKALDATRLALPVLLVVGLAAIHYIQSPGDVRLFNAVPRNQFAAAMLGFLTSYRLPLLYRELSRAAELDELTGSMPGSLAAGSRLLRQARDKQQS-EAMAAVTAGPAGVPVVVVSGPRGLGRDALVDK-LATNGGVRLPVWCTTRPQKEGEVEGVDYYFLSPVRFEEEVKGMGERSGFLQVRQHS-GESYGLRASEVVKEDVNGAVTVLNADCDLVKQLVTLEGIVIIGVWVSLDSLGAIEARLRAVLTEQEGWATDTDEDRARLDQEVAGRAKQAVEDIEFGVTSNIFEFTIIDT-DQEASLGKLQKALAYA 597          
BLAST of mRNA_H-canaliculatus_F_contig1397.3143.1 vs. uniprot
Match: A0A7S1CRS6_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CRS6_9STRA)

HSP 1 Score: 233 bits (594), Expect = 3.720e-65
Identity = 184/553 (33.27%), Postives = 285/553 (51.54%), Query Frame = 1
Query:  232 SSSLGTMKQEPVPGKDHEGENVADLEPR-PFPKVGDVVRY----EGKWENEVSFGEVRQLKKVEE-------TGEWRAYVLPLESIGDDQYA---RKKNQKSKAEDAATLRPVRAFYVRNVDGFKVMHNSATREPRYISDAYELEGFELPK---IEVDPVKFAAELESYEDLKRRLVVDAALFGAVGAFVTLQIFGANQGLLFALGALASVAYVILLEKTADDVASGKQDVATKLKGDARFAVPVLLVVTLALKNY-------VADPGGVVLFKLIPKEEFAAAMIGFIAPARLPLLYREFKSSLRGDEVLDMLPGSLGQGRAILRNMGEPTGAPTSVGEETAGPS-LTRVIVVSGPKCLGKTSLVNKILEEDKRLAQPAWCTTRPIRASEAEGQEVFFMKQVKFEELERKGAFLHVYKDSKGESYGLRLEDISAIAE--------EGKVCIVDANMNIVRALTGVGELALIGVWVSLDSIEAIEERIRTTLISTGAADEPDLDAD---VRGLVRQAVEDIEFGVMSGVFDFTVINNGDVDESMETLRRAVEF 1779
            S +L  ++   +P +D   E     +P+ P PK+GDVVRY     G  E +V  G++  ++ +         T +W   +  +E +GD  YA    +K +K        + PV A +VR  D +K+     T  P     +Y+L G+E P    I  D VK   + E Y  +K  L+ ++A+ GA GA V   + G+N  L++A GA A VAY+  L    D V S    + + +  + RF  P L++V +AL N        V+ PG   +F  +  ++F AAM GF+   R+PLL  +  S +  +   DM+PGS G    + ++  +  G   S+ E+ A    LT V +VSGP+  GKT+LVNK+LE D R  +PA       + ++A          VKFE L+++GAFL V  D  G  YGL  E +   A         E KV +VDA++ + + +  V    L+GVW+ LD ++  E R++T  IS+G    P+ + +   +R  +RQ V+DIEFGV+SGVF+FT++N  DVD+S + L+ A  +
Sbjct:   60 SPTLTVLQMAYIPPED--AEKAKTTKPKLPQPKIGDVVRYFDMDGGLAEGQVLVGKISLIQPIRSEPTSEDGTNKWLVEINEMEDVGDGYYADYPSRKRRKCALRKLEEIAPVPASFVRTEDAYKIPVERGTNRPLPSHASYDLIGYEGPAAVPINQDVVK--TDGEKYGKIKSDLIRNSAIAGAAGAIVAQLVSGSNIALIYAAGAFAGVAYLFFLGIKTDTVGSEDAKLGSNVS-NLRFVFPGLVLVGVALNNKMSGDSNPVSTPG---MFSTVTPQQFGAAMAGFLT-YRVPLLVSQL-SPVISESAADMVPGSAGMAMRLAQDA-KNRGVDMSLLEDKAAKDGLTTVFLVSGPEATGKTTLVNKLLESDSRFVKPALVD----KIADA----------VKFERLQQRGAFLEV--DQSGR-YGLAKEGVLEAAGQPSDSENGEKKVVVVDADVELAKKMVNVSGARLVGVWIGLDDLDKFESRLKTK-ISSGMVPIPEDETEDTVLRAKIRQVVKDIEFGVVSGVFEFTILNE-DVDDSFKQLKDAASY 582          
BLAST of mRNA_H-canaliculatus_F_contig1397.3143.1 vs. uniprot
Match: K0SQT0_THAOC (GuKc domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SQT0_THAOC)

HSP 1 Score: 232 bits (591), Expect = 2.880e-64
Identity = 180/547 (32.91%), Postives = 274/547 (50.09%), Query Frame = 1
Query:  262 PVPGKDHEGENVADLEPR-PFPKVGDVVRYE----GKWENEVSFGEVRQLKKV-----------EETGEWRAYVLPLESIGDD---QYARKKNQKSKAEDAATLRPVRAFYVRNVDGFKVMHNSATREPRYISDAYELEGFELP---KIEVDPVKFAAELESYEDLKRRLVVDAALFGAVGAFVTLQIFGANQGLLFALGALASVAYVILLEKTADDVASGKQDVATKLKGDARFAVPVLLVVTLALKNY-------VADPGGVVLFKLIPKEEFAAAMIGFIAPARLPLLYREFKSSLRGDEVLDMLPGSLGQGRAILRNMGEPTGAPTSVGEETAGPSLTRVIVVSGPKCLGKTSLVNKILEEDKRLAQPAWCTTRPIRASEAEGQEVFFMKQVKFEELERKGAFLHVYKDSKGESYGLRLEDISAIAE---------EGKVCIVDANMNIVRALTGVGELALIGVWVSLDSIEAIEERIRTTLISTGAADEPD---LDADVRGLVRQAVEDIEFGVMSGVFDFTVINNGDVDESMETLRRAVEF 1779
            P+     + +    ++P+ P PK+GDVVRY     G  + +   G++  ++ +           + TG W   +  LE +GD    +Y  +K +KS       L P+ A +VR+ D FKV     T EP      Y+L G+E P   +I  D V+   + E+Y  +K  L+ +AA+ GA+G  +     G     L+ LGAL+ VAY+  L    D + S    + + +  +ARF  P L++V +ALKN        V  PG   +F  +  E+FA+ MIGF+   R+PL   +    L  +   DM+PGS      +  +  +  G   S  +E A   LT V++VSGP+  GKT+LVN++LEED R         RPI            +  VKFE+ E +  FL     S G  +GL  E I   AE         E KV +VDA+ +  + L  +    +IGVW+ LD +E  E R+++ ++S GA   PD    D+ +R  VRQ V+DIEFGV+SGVF+FT++N  D+D+S+  L+ A  +
Sbjct:  119 PILAYTRQDDTTTLIQPKLPEPKIGDVVRYYDIDGGSNQGQTLVGKISFIQPIRTSADSPSSNEDGTGRWLVEITELEDVGDGYFAEYPSRKRRKSSLRKLEELAPLPASFVRSEDAFKVPTKKGTNEPLPSHPGYDLVGYEGPMATQINQDIVQ--QDAENYSQVKMSLIKNAAIAGAMGTIIADLFRGTEDAALYFLGALSGVAYLFFLGIKTDTLGSPDSKLGSNVS-NARFVFPALVLVGVALKNMMSGDLNPVTTPG---IFSTVTPEQFASVMIGFLT-YRVPLFVSQLTPVL-SESASDMIPGSAAMAVRLAADA-KSRGVDVSALDEKANDGLTTVLLVSGPESTGKTTLVNRLLEEDSRFV-------RPILVDR-------MVDGVKFEQKEARDEFLQ----SDGR-FGLAKEGILQAAEKAMDGVDPAEKKVVVVDADADTAKKLVQISGARVIGVWIGLDDLEKFESRLKSKILS-GAVKIPDDENEDSVLRAKVRQVVKDIEFGVVSGVFEFTILNE-DIDDSVRQLKEAANY 635          
BLAST of mRNA_H-canaliculatus_F_contig1397.3143.1 vs. uniprot
Match: B5YN95_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YN95_THAPS)

HSP 1 Score: 229 bits (583), Expect = 1.360e-63
Identity = 179/555 (32.25%), Postives = 274/555 (49.37%), Query Frame = 1
Query:  232 SSSLGTMKQEPVPGKDHEGENVADLEPR-PFPKVGDVVRYE----GKWENEVSFGEVRQLKKV-------EETGEWRAYVLPLESIGDDQYAR---KKNQKSKAEDAATLRPVRAFYVRNVDGFKVMHNSATREPRYISDAYELEGFELPK-IEVDPVKFAAELESYEDLKRRLVVDAALFGAVGAFVTLQIFGANQGLLFALGALASVAYVILLEKTADDVASGKQDVATKLKGDARFAVPVLLVVTLALKNYVADPGGVV----LFKLIPKEEFAAAMIGFIAPARLPLLYREFKSSLRGDEVLDMLPGSLGQGRAILRNMGEPTGAPTSVGEETA--GPSLTRVIVVSGPKCLGKTSLVNKILEEDKRLAQPAWCTTRPIRASEAEGQEVFFMKQVKFEELERKGAFLHVYKDSKGESYGLRLEDISAIA----------EEGK----VCIVDANMNIVRALTGVGELALIGVWVSLDSIEAIEERIRTTLISTGAADEPDLDAD---VRGLVRQAVEDIEFGVMSGVFDFTVINNGDVDESMETLRRAVEF 1779
            SS+L T+     P +D   E V   +P+ P PKVGDVVRY     G  + +   G++  ++ +       E T +W   +  +E +GD  YA    +K ++S       + P+ A +VR  D +K+     T  P      Y+L G+E P  + ++    AA+ E+Y+ +K  L+ +AA+ G VG        G     ++  GALA VAY+  L    D V S +  + + +  + RF  PV ++V +ALKN  +     V    +F  +  E+F AAMIGF+   RLPL   +    +      DMLPGS G    +  N  +  G   +  E     G  L  V++VSGP+  GKT+L+NK++EED R  +P                    +  VKFE LE++G  L V  D+ G  YGL+ E +   A           EG     V +VDA++ + + L  V    L+GVW+ LDS+E  E R++   I +GA   P  + +   +R  VRQ V+DIEFGV+SG+F+FT++N  D+DES+  L+ A  +
Sbjct:   51 SSTLSTLHMAYSPPED--AEKVKATKPKLPSPKVGDVVRYYDVDGGTTDGQTLVGKISLIQPIRPPTNNPEGTNKWLIEITEMEDVGDGYYAEYPSRKRRRSALRKLEEIAPLPASFVRTEDAYKIPMERGTNRPMPSHSGYDLIGYEGPAAVPINQDVVAADGENYDKIKYSLIRNAAIAGTVGTIFADLFKGTEDAAIYFAGALAGVAYLFFLGIKTDTVGSAEAKLGSNVS-NLRFIFPVFVLVAVALKNVSSGDANPVDVPGIFSTVTPEQFGAAMIGFLT-YRLPLFVSQLAPVI-SKSATDMLPGSAGMALQMA-NDAKKRGVDVAALERELLPGDDLVTVLLVSGPEATGKTTLINKLMEEDPRFVKPIMLDR--------------MVDGVKFERLEQRGELLDV--DASGR-YGLQKEGVLEAAAKALPSSDDDNEGNAKRNVVVVDADVALAKKLVNVSGARLVGVWIGLDSLEKFESRLKAK-IDSGAVAVPADETEASFLRAKVRQVVKDIEFGVVSGLFEFTILNE-DIDESLRQLKEAAAY 580          
BLAST of mRNA_H-canaliculatus_F_contig1397.3143.1 vs. uniprot
Match: A0A7S3UZL7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZL7_HETAK)

HSP 1 Score: 206 bits (523), Expect = 3.770e-57
Identity = 118/290 (40.69%), Postives = 177/290 (61.03%), Query Frame = 1
Query:  274 KDHEGENVADLEPRPFPKVGDVVRYEGKWENEVSFGEVRQLKKVEETGEWRAYVLPLESIGDDQYARKKNQKSKAEDAATLRPVRAFYVRNVDGFKVMHNSATREPRYISDAYELEGFELPKIEVDPVKFAAELESYEDLKRRLVVDAALFGAVGAFVTLQIFGANQGLLFALGALASVAYVILLEKTADDVASGKQDVATKLKGDARFAVPVLLVVTLALKNYVA---DPGGVVLFKLIPKEEFAAAMIGFIAPARLPLLYREFKSSLRGDEVLDMLPGSLGQGRAILR 1134
            K  + +NVA    RP+P+ GD+V + GKW++E SFG +R L+ +E    W A VLPL  IG++ Y+ K+  +++  D   LRPVR+FYVR+ DG+KV+       P + +D+YE+EGF+LPK +VD   +A     Y DLK RL+ D ALFGA  A       G   G++F LG L S  YV+LL K  D V  GK+       G+ARF +P LLV  +AL++ +    + G  +    +P+++F AA++GF++  R+PLL+RE  +++ G E+ ++LPGSLG    + R
Sbjct:   64 KGSDEQNVAVK--RPYPRAGDIVTFPGKWQDETSFGRIRNLQYIESRNAWIADVLPLSDIGENIYSAKRAARTEVYDVKDLRPVRSFYVRSSDGYKVIFGK-DGAPAFFADSYEVEGFKLPKPKVDEAAYAQSAVEYRDLKGRLLRDTALFGAACAAAAAVFQGPEDGVVFGLGVLTSCLYVVLLGKKTDAV--GKKGSLDDQLGNARFFLPFLLVGGIALEHALTHDYETGSYL--ATVPRDQFGAAVLGFLS-YRVPLLFRELGAAVDGTEIAELLPGSLGAAAKLSR 345          
BLAST of mRNA_H-canaliculatus_F_contig1397.3143.1 vs. uniprot
Match: A0A7S3V433_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V433_9STRA)

HSP 1 Score: 207 bits (527), Expect = 2.020e-55
Identity = 166/512 (32.42%), Postives = 265/512 (51.76%), Query Frame = 1
Query:  319 FPKVGDVVRYE----GKWENEVSFGEVRQLKKVEETGEWRAYVLPLESIGDDQYAR---KKNQKSKAEDAATLRPVRAFYVRNVDGFKVMHNSATREPRYISDAYELEGFELPK-IEVDPVKFAAELESYEDLKRRLVVDAALFGAVGAFVTLQIFGANQGLLFALGALASVAYVILLEKTADDVASGKQDVATKLKGDARFAVPVLLVVTLALKNYV-----------ADPGGVVLFKLIPKEEFAAAMIGFIAPARLPLLYREFKSSLRGDEVLDMLPGSLGQGRAILRNMGEPTGAPTSVGEETAGPSLTRVIVVSGPKCLGKTSLVNKILEEDK-RLAQPAWC--TTRPIRASEAEGQEVFFMKQVKFEELERKGAFLHVYKDSKGESYGLRLEDISAIAEEGKVCIVDANMNIVRALTGVGELALIGVWVSLDSIEAIEERIRTTLISTGAADEPD---LDADVRGLVRQAVEDIEFGVMSGVFDFTVINNGDVDESMETLRRAVEF 1779
            FPKVGD+VRY     G+ + +   G++  ++    + +W A V  L+ +G+  YA    +K +KSK     T+ P+   YVR  D FK+  ++      Y+ D Y LE +E P  I VD      +L +Y  LK RL+ DAA+ G +G  +   I G +  L++  GA+A V Y+  L    D + S    + T +  + RF +PVL++V +AL+N             + PG ++ F  + +E+FAAAM+GF+   R+PL   +    +  +     LPGS G    + R+  +   A  S      G  LT V+VVSGP   GK+ LV ++++E + +L  P +      PI   + EG+       +KF+   R G    + KDS   +     E         +V +VDA++++ + LT VG L L+GVWV LD +E  E+R+ T  I +G    P+    D+  R  +R+ V+DIE+GV+SG+F+FTV+N+ + + SM  L+ A E+
Sbjct:  108 FPKVGDLVRYYDLDGGQAKGQELVGKLSFIQASSGSSQWLAEVTELDDVGEGYYAEYPSRKRRKSKLIGLETVSPLMGSYVRTEDAFKIPTDAMGNVRPYM-DTYSLEEYEGPMAIPVDESVLQEDLNNYSSLKGRLLRDAAIAGFIGTIIADLIKGFDDALVYFFGAIAGVGYLFFLGIKTDTLGSVDAKMGTNVS-NLRFFLPVLVLVGVALQNVSMGSNSPMSADGSSPGNMLRF--VSQEQFAAAMLGFLT-YRIPLFTSQLVPII-SETAGATLPGSAGVAMQMARDAKKSKEAKESSNNIFDGDDLTTVLVVSGPSFTGKSDLVKRLIDESEGKLIAPKYLDKVADPIIFEQMEGRNGI----LKFDTTGRYG----LTKDSLVNAARKPSESGENAGVIEQVVVVDADVDLAKKLTNVGGLRLVGVWVGLDQLEKFEDRL-TEEIDSGKFPIPEDETPDSFRRAKIREIVKDIEYGVVSGIFEFTVLNDSE-ERSMMQLKNAAEY 603          
BLAST of mRNA_H-canaliculatus_F_contig1397.3143.1 vs. uniprot
Match: A0A7S4JT84_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JT84_9STRA)

HSP 1 Score: 202 bits (515), Expect = 9.120e-54
Identity = 175/555 (31.53%), Postives = 268/555 (48.29%), Query Frame = 1
Query:  271 GKDHEGENV-ADLEPRPFPKVGDVVRY----EGKWENEVSFGEVRQLKKV----------EETGEWRAYVLPLESIGDDQYA----RKKNQKSKAEDAATLRPVRAFYVRNVDGFKVMHNSATREPRYISDAYELEGFELPK-IEVDPVKFAAELESYEDLKRRLVVDAALFGAVGAFVTLQIFGANQGLLFALGALASVAYVILLEKTADDVASGKQDVATKLKGDARFAVPVLLVVTLALKNYVADPGGVV-------LFKLIPKEEFAAAMIGFIAPARLPLLYREFKSSLRGDEVLDMLPGSLGQGRAILRNM--GEPTGAPTSVGEETAGPSLTRVIVVSGPKCLGKTSLVNKILEEDK-RLAQPAWCTTRPIRASEAEGQEVFFMKQVKFEELERKGAFLHVYKDSKGESYGLRLEDISAIA------EEGK-------------VCIVDANMNIVRALTGVGELALIGVWVSLDSIEAIEERIRTTLISTGAADEPDLDAD---VRGLVRQAVEDIEFGVMSGVFDFTVINNGDVDESMETLRRAVEF 1779
            G D +G+ V A     P+PK GDVVRY     G  + E   G++  ++ +          + TG W   +  +E +GD  YA    RK+  K        + PV A +VR  D +K+  + A R P  + D Y+L G+E P  + V+     ++ E Y  LK +L+ DAAL G  G  +   + G +  + +  GA+A V YV  L    D + S    +   +  + RF +P +++VT+A++N      G +       +F  +  E+FA AM+GF+   R+ L   +  S + GD + DMLPGS G    + ++   G   GA   + +E   P    V++V GP   GKTSLV K++ +   R  +P       +    A+G          FE LE +  FL V  D+ G  YGL  E +   A      E G+             V +VDA++ + + LT V    LIGVWV LDS E  E R+R+  I +G    P+ + +   +RG V+  V+DIE+GV+SG+F+FT++NN D D S   L  A E+
Sbjct:   71 GYDRQGDEVVAKKREPPYPKAGDVVRYFDVDGGAADGEALVGKIVLIQSILSKASADAYDDGTGRWLVEIQEMEDVGDGYYADYPSRKRRSKQSLRKLEEVAPVSASFVRTEDAYKIPRDRAGR-PLSLFDQYKLVGYEGPAAVPVNEEVVQSDAERYAALKIKLLKDAALAGLFGTVLVELLRGFDDAITYLAGAIAGVGYVFFLSVKTDTLGSAGAKLGKNVS-NLRFGLPAIVLVTVAVRNVALGANGPLGPDGPGSMFSTVTAEQFACAMLGFLT-YRVTLFASQL-SPVVGDSLGDMLPGSAGVALRMAQDAKEGGEEGASGGLFDENLKP----VLLVCGPAGTGKTSLVKKLVADGGGRFVEPM------MMDRVADGAT--------FERLELRDEFLKV--DATGR-YGLTAEGVLTAAASPAADEPGEGXXXXXXXXXXQQVVVVDADVALAKKLTQVSGARLIGVWVGLDSTEKFENRLRSQ-IESGDLPIPEDETEESVIRGKVKAIVQDIEYGVVSGIFEFTILNN-DFDTSFAQLEEAAEY 598          
BLAST of mRNA_H-canaliculatus_F_contig1397.3143.1 vs. uniprot
Match: A0A4D9CUJ6_9STRA (Guanylate kinase-like domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUJ6_9STRA)

HSP 1 Score: 198 bits (503), Expect = 8.730e-53
Identity = 154/523 (29.45%), Postives = 251/523 (47.99%), Query Frame = 1
Query:  325 KVGDVVRYEGKWENEVSFGEVRQLKKVEETG---EWRAYVLPLESIGDDQYARKKNQKSKAEDAATLRPVRAFYVRNVDGFKVMHNSAT--------REPRYISDAYELEGFELPKIEVDPVKFAAELESYEDLKRRLVVDAALFGAVGAFVTLQIFGANQGLLFALGALASVAYVILLEKTADDV--ASGKQDVATKLKGDARFAVPVLLVVTLALKNYVADPGGVVLFKLIPKEEFAAAMIGFIAPARLPLLYREFKSSL-------RGDEVLDMLPGSLGQGRAIL-RNMGEPTGA---PTSVGEETAGP--SLTRVIVVSGPKCLGKTSLVNKILEED--KRLAQPAWCTTRPIRASEAEGQEVFFMKQVKFEELERKGAFLHVYKDSKGES---YGLRLEDI-SAIAEEGKVCIVDANMNIVRALTGVGELALIGVWVSLDSIEAIEERIRTTLISTGAADEPDLDADVRGLVRQAVEDIEFGVMS-----GVFDFTVINNGDVDESMETLRRAVEFA 1782
            ++GDVV + GKW  +   G++R L+   +     EW A + P + +G+D Y  +K  +++    + L+P+  FY+ + D FKV H            REP  ++  Y  EGF L   +VD    AA    Y+DLKRR++ D A FG +         G     +F  G   SV Y++LL + AD +  A G+    +K  G             LA         G  LF  +P++EF +A +GF++  R+P+L RE    L       RG      L GS+  G A++ R  G   G     T+  E   G   +   V+VVSGP+ +GK  L  +++E D  +R A+P W TTR  +  E +G++  F++   F+ +  +G FL  Y++  GE    +GLR  D+   + +EGKV ++  +      L  +GE  LIGVWV+L++++ +  R           +E   + +V   V +A   IE  +M      G ++ T+ ++   +E++ +LR   +FA
Sbjct:    9 RLGDVVLFPGKWVGDTGIGQIRFLQLTGDGRGGKEWIADLTPFKDVGEDLYRAEKGTRARTFPVSALQPLSHFYIGSSDAFKVPHKEEAGGEGMGRRREPVRMAPGYRTEGFSLAPAKVDAEAMAAARGKYQDLKRRILTDTAAFGGLATVAVGLNAGVEDAGIFLAGVAGSVLYLVLLTQRADAMGQAGGEGGGLSKAGGGKPVHXXXXXXAGLA---------GGRLFNYVPQDEFWSATLGFLS-YRVPMLGREVGEMLARRSEGQRGQA--GTLGGSVRAGMALVDRLQGGREGGREGETAAAEAAGGAYRNEVTVLVVSGPEGMGKRGLARRLVESDPLQRYAEPVWVTTRAPKEGEVDGRDYHFVEDFAFQVMREQGRFLTAYQEEAGEGRAWFGLRPSDVVDVMRKEGKVSVLALDAFAADKLLALGEARLIGVWVTLNTVDQLRGRY--------GGEEGGKEEEVEAAVSRATVAIEHALMGEAGRRGFYEHTIYDDKGKEETLRSLRDFADFA 511          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1397.3143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6A9_ECTSI8.340e-31176.42Guanylate kinase-like domain-containing protein n=... [more]
A0A6H5JKB3_9PHAE2.370e-22679.44Guanylate kinase-like domain-containing protein n=... [more]
A0A835YPD8_9STRA3.440e-10942.13P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S1CRS6_9STRA3.720e-6533.27Hypothetical protein n=2 Tax=Skeletonema marinoi T... [more]
K0SQT0_THAOC2.880e-6432.91GuKc domain-containing protein n=1 Tax=Thalassiosi... [more]
B5YN95_THAPS1.360e-6332.25Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A7S3UZL7_HETAK3.770e-5740.69Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3V433_9STRA2.020e-5532.42Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S4JT84_9STRA9.120e-5431.53Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A4D9CUJ6_9STRA8.730e-5329.45Guanylate kinase-like domain-containing protein n=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1397contigH-canaliculatus_F_contig1397:9000..13447 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score864.0
Seed ortholog evalue4.1e-248
Seed eggNOG ortholog2880.D7G6A9
KEGG rclassRC00002
KEGG koko:K00942,ko:K20307
KEGG ReactionR00332,R02090
KEGG Pathwayko00230,ko01100,map00230,map01100
KEGG ModuleM00050
EggNOG free text desc.guanylate kinase activity
EggNOG OGsCOG0194@1,KOG0707@2759
EC2.7.4.8
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-10_001180.1
Exons9
Model size1794
Cds size1794
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929142.0585225-CDS-H-canaliculatus_F_contig1397:8999..90611622929142.0585225-CDS-H-canaliculatus_F_contig1397:8999..9061Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 9000..9061 +
1696845693.3851175-CDS-H-canaliculatus_F_contig1397:8999..90611696845693.3851175-CDS-H-canaliculatus_F_contig1397:8999..9061Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 9000..9061 +
1622929142.0718853-CDS-H-canaliculatus_F_contig1397:9312..96341622929142.0718853-CDS-H-canaliculatus_F_contig1397:9312..9634Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 9313..9634 +
1696845693.398689-CDS-H-canaliculatus_F_contig1397:9312..96341696845693.398689-CDS-H-canaliculatus_F_contig1397:9312..9634Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 9313..9634 +
1622929142.0849984-CDS-H-canaliculatus_F_contig1397:10570..106451622929142.0849984-CDS-H-canaliculatus_F_contig1397:10570..10645Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 10571..10645 +
1696845693.4112334-CDS-H-canaliculatus_F_contig1397:10570..106451696845693.4112334-CDS-H-canaliculatus_F_contig1397:10570..10645Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 10571..10645 +
1622929142.098713-CDS-H-canaliculatus_F_contig1397:10882..109411622929142.098713-CDS-H-canaliculatus_F_contig1397:10882..10941Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 10883..10941 +
1696845693.4280226-CDS-H-canaliculatus_F_contig1397:10882..109411696845693.4280226-CDS-H-canaliculatus_F_contig1397:10882..10941Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 10883..10941 +
1622929142.1127582-CDS-H-canaliculatus_F_contig1397:11126..111691622929142.1127582-CDS-H-canaliculatus_F_contig1397:11126..11169Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 11127..11169 +
1696845693.4433901-CDS-H-canaliculatus_F_contig1397:11126..111691696845693.4433901-CDS-H-canaliculatus_F_contig1397:11126..11169Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 11127..11169 +
1622929142.126285-CDS-H-canaliculatus_F_contig1397:11314..113891622929142.126285-CDS-H-canaliculatus_F_contig1397:11314..11389Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 11315..11389 +
1696845693.4522834-CDS-H-canaliculatus_F_contig1397:11314..113891696845693.4522834-CDS-H-canaliculatus_F_contig1397:11314..11389Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 11315..11389 +
1622929142.140197-CDS-H-canaliculatus_F_contig1397:11711..118311622929142.140197-CDS-H-canaliculatus_F_contig1397:11711..11831Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 11712..11831 +
1696845693.465616-CDS-H-canaliculatus_F_contig1397:11711..118311696845693.465616-CDS-H-canaliculatus_F_contig1397:11711..11831Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 11712..11831 +
1622929142.1524327-CDS-H-canaliculatus_F_contig1397:12234..129541622929142.1524327-CDS-H-canaliculatus_F_contig1397:12234..12954Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 12235..12954 +
1696845693.478897-CDS-H-canaliculatus_F_contig1397:12234..129541696845693.478897-CDS-H-canaliculatus_F_contig1397:12234..12954Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 12235..12954 +
1622929142.1623955-CDS-H-canaliculatus_F_contig1397:13129..134471622929142.1623955-CDS-H-canaliculatus_F_contig1397:13129..13447Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 13130..13447 +
1696845693.4885569-CDS-H-canaliculatus_F_contig1397:13129..134471696845693.4885569-CDS-H-canaliculatus_F_contig1397:13129..13447Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1397 13130..13447 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1397.3143.1prot_H-canaliculatus_F_contig1397.3143.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1397 9000..13447 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1397.3143.1

>prot_H-canaliculatus_F_contig1397.3143.1 ID=prot_H-canaliculatus_F_contig1397.3143.1|Name=mRNA_H-canaliculatus_F_contig1397.3143.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=598bp
MSRCRAHAVGIFLLATGATGWNFVAPRMSTMSPAHKQPVRRSGLPGIHAR
RHRRLPYSPHDYGLGYRVRSDARSRLGSSSLGTMKQEPVPGKDHEGENVA
DLEPRPFPKVGDVVRYEGKWENEVSFGEVRQLKKVEETGEWRAYVLPLES
IGDDQYARKKNQKSKAEDAATLRPVRAFYVRNVDGFKVMHNSATREPRYI
SDAYELEGFELPKIEVDPVKFAAELESYEDLKRRLVVDAALFGAVGAFVT
LQIFGANQGLLFALGALASVAYVILLEKTADDVASGKQDVATKLKGDARF
AVPVLLVVTLALKNYVADPGGVVLFKLIPKEEFAAAMIGFIAPARLPLLY
REFKSSLRGDEVLDMLPGSLGQGRAILRNMGEPTGAPTSVGEETAGPSLT
RVIVVSGPKCLGKTSLVNKILEEDKRLAQPAWCTTRPIRASEAEGQEVFF
MKQVKFEELERKGAFLHVYKDSKGESYGLRLEDISAIAEEGKVCIVDANM
NIVRALTGVGELALIGVWVSLDSIEAIEERIRTTLISTGAADEPDLDADV
RGLVRQAVEDIEFGVMSGVFDFTVINNGDVDESMETLRRAVEFATAK*
back to top

mRNA from alignment at H-canaliculatus_F_contig1397:9000..13447+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1397.3143.1 ID=mRNA_H-canaliculatus_F_contig1397.3143.1|Name=mRNA_H-canaliculatus_F_contig1397.3143.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=4448bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1397:9000..13447+ (Hapterophycus canaliculatus Oshoro5f female)
ATGTCACGTTGTCGAGCTCATGCGGTGGGAATATTTTTGCTCGCGACGGG AGCAACCGGATGGTGGGTGGAGTGGATTTTCAATTGGCCGTGACAAGTTA TCGTCATACAAGCAAATCTAATCCCGGACAGGCTGCACATGCTGTCTCTG GGGCTGATCGGTTTCCTTACTGCTGGCATCACTGGGATGCACATGCGGAA GTGCTGTTGTTGATGCCTGAAAGACCTACCGAATGACTTCGTGCTTGCCG TACCCCTTCTTCTTCGTTTTGAATGAAACTAACATCAGCGTGCAAACACA TCCTGATATCCAGGAATTTCGTTGCGCCCAGGATGAGCACAATGTCACCG GCGCACAAGCAACCGGTCAGACGCTCTGGCCTTCCCGGGATTCACGCACG GCGCCATCGCCGGTTGCCTTACTCTCCGCATGACTATGGGCTTGGCTATC GAGTCCGAAGCGATGCAAGGTCGCGGCTGGGAAGCTCGTCGCTGGGCACG ATGAAGCAGGAACCAGTGCCAGGAAAGGATCATGAAGGCGAAAACGTTGC CGATCTTGAGCCTAGACCGTTCCCCAAAGTTGGGGATGTCGTTCGCTATG AGGGGAAGTGGGAGAACGAGGTGTCCTTCGGAGAGGTGAGGCAGCACCCC TCAAATGATCAAATCCAGCGACAAAATTGAACCTGGTAATTATTTGTCTA AAAAAGAAGATGATGTGAACCCACAAGAAGAGTAACTCTGATATGGCGAT TGCAAATTATCTAACGAGTTTTCGCTACATGTAGTGTGGGACTCCAGATG CCACAGGCATAATACACCGGCTAGACGCCATGTGAGGATTGTGCTTGTAA CGTGTTTTAGTGATTCGCTCTGGGCGTTTTTCAGAAGCCATCAAAGTACT GGCTTGGGTGAGTCCGAATCTGAGGTACAATCTGGACCAAAGCCGACGAC TACTTTTGCCGTTTAACACGACTCGTCTGCAGGTGAAGACCAGCAGCAAG GGAAATGTGATGTTGAGCCCAACCAGAATGGAGCAGTCGTGATGGAAAGG TCAACGCGTTTGAAATCAACCATGTTCTGTCACGAACTCTTTCAGCGTTC GAAATGTTAGTTCCTTCTACTTTTATACTCCCTGTGCAGGACATTCTGGG TGCTTTGCGCCCCTCTGAAATAAACTAAGAAACAAGCTCTCGTAACGCGG GAAGTGATGCAACTGCTTGGCACCTTCCCCGCTGGATGTACAAGTAGTCA AGAATCCAGGATACGTGACAAATATTAATATTGGCCATTGCCGTACGCCT TGACACAAGCAATGGCGCAAGAGTATAGTTAGTGGCGCCTGATAGAGATC AAGCACATTGAATCGCGCGACTTAACAACCAAGAGTATTTTATGGAACAA GTTTCCTGCTTCCGGCTCGGGAAGAGAAAGTTGTGCAAAAAATTCGGTTT ACTATCGTTTCAATGCAGCCGCCTGTTAAGAAAAGCACGTTCTCAAGGTT CAATTCAGAGTTGTTGTTCAAACGTGACTTTTTCGCCGGTCGTTACGATG TCATTCTTGTCGTCGCGTTAGGTTCGTCAGCTCAAGAAGGTGGAGGAAAC GGGGGAGTGGCGAGCGTATGTGCTCCCTTTGGAGTCTATCGGAGATGTGA GCGGTCCACTATTCTAGTTGCAGATGCTTCTAATACTTGCGCTCCTCTCA ATGTAATAGTTATTTTCGTGCCGTTTGCACGCACGAAACAGCCTCCGCAA TTAATTTTTGTGAGCAGAATACCATCACTCGATAAGAGAAGGTAGTATTG CACTGCACACCAGTGTTCAGTAAACACCAACAGACATGATCATACCGCTC TATTTGCAACACTCTGGGTGTCCACTCCCACAGGATCAGTACGCACGTAA GAAGAATCAAAAGTCGAAGGCGGAGGATGCCGCTACCCTGAGGTAAGCAG GCGGCCCCCTGCCTCTCCAAGTCTTCGTGTTCCCCGCCACGCTTGCGCCA CGTGCTTTGTAGAGGGCACTGGTTTAGGAGCTAGAAAATGTGTGGCCCTC GACCTCGTCAAATCCAACTTCCTACTCTCACTACACTGTCTCTTGCATCT GTTTTGTGTCTTACGATGGTTTGACAGGCCTGTACGGGCATTTTACGTGC GGAATGTCGACGGTTTCAAGGTGAGGTCCTGGCATCAACACAAGCTCAGA TGTGCCACGCACGATGTGCACCACTAACAGTATTTTCTTGTTTTGAGCTA GGCTTGATCGGTCCACATGGATGACGTCTCACACAAGCCTTTCTCTGAAT TCATTTCAACCACAGGTAATGCACAATTCTGCGACACGGGAACCACGCTA TATCAGCGATGCCTACGAGCTTGAAGGGTTTGAACTACCGGTGAGTATTG CAACAACAAAATATGCCTTCAAGCGTTGCTTTCGCACGGTATCATTCCAA TCCAAAGAAGTACCACAGCGTCCAAAGCGCATCTTTTGCTGATCCGAAAC AGTCGCGGTTGCGACGTGTTTGAAGCACGAAATCTGTAGAATCAAGTAAA TGCCACGGAGAACCGTAAAGTCACCACGGCCTTTCTTCGCTCAAACCGGA CCGGTGAAAGGGAAACGTCCAACTTTCGCGATGCCTGCATCTATCCATTA TGTCTAAGAGTGACCCCACCCAATCATTACAACGGGCGCTGGGTTTGGTG GCGTGCTGTCAGAAAATTGAGGTCGACCCTGTCAAATTTGCGGCTGAGCT GGAATCGTACGAAGATCTGAAGCGACGACTCGTTGTGGACGCCGCTCTCT TCGGCGCAGTTGGCGCGTTTGTCACTCTTCAGGTGGGGCACCGGAGACCA GTCGTTGTGATCGCGGAGGGACAATGACTGCATCGTTTTGAAAGTGCTCA AAGAAGCCGTTGCATGTTCATCCGCCGGTTTGAGCCAGAGTTGGTTACTT TTCTTGCACTTGATAACTCCGGCATCCGCTTGTAATGCCGCCATGTCTGC AAGCCTTTTCGTCTGCGGAATGATGCGTTTTCGCAGAGACGAAGCCCTGG AGACAGTTGCCGATTGCACAGATGCAGCGGTTGCTGTGGCAGGCAAATAA GGATCTCCAAATATGATGTTGGAAATTGAAGTGGGCCTTCAGGATGGCTC GCACACCGCATGCAAGAACCACTTCCCGTCGGCGCGCCCATCTATACCAC ATCACCTCTGTTTTGCCTCCGACATGACCTTTCAGATATTTGGAGCGAAC CAGGGATTGCTTTTCGCGTTGGGGGCTCTCGCCTCCGTGGCCTACGTCAT CCTCCTCGAAAAAACGGCCGACGACGTTGCGAGTGGCAAGCAGGATGTCG CCACAAAGCTTAAGGGTGACGCCCGCTTTGCCGTACCTGTGTTGCTGGTC GTTACTCTGGCTCTGAAGAACTACGTTGCCGATCCTGGTGGTGTCGTACT TTTTAAACTGATACCGAAAGAAGAGTTCGCTGCGGCCATGATCGGGTTTA TTGCCCCAGCTAGACTGCCTCTTCTATACCGCGAGTTCAAGTCGTCGCTC AGGGGCGATGAGGTGTTGGACATGCTGCCTGGGTCGCTCGGCCAAGGCCG GGCGATTTTGAGGAATATGGGGGAACCGACCGGAGCGCCGACAAGTGTGG GGGAAGAGACGGCGGGGCCGAGCCTCACGCGTGTCATCGTCGTTTCAGGT CCGAAATGTCTTGGTAAGACCTCTCTCGTCAACAAGATACTGGAGGAAGA CAAGCGCCTTGCTCAACCCGCCTGGTGTACGACGAGGCCGATACGGGCTT CGGAGGCTGAAGGACAAGAGGTATTTTTTATGAAGCAGGTGAAGTTTGAG GAACTTGAGCGCAAAGGGGCCTTTCTACACGTGTACAAGGACAGCAAGGG AGAGTCTTATGGCTTGAGGCTTGAAGACATCTCGGCAATCGCCGAGGAGG GCAAGGTGGGTTTCAATTATCTTCGCTCTCGATCTGTACTTTAATCGAAT TCGCGAGGGACTGCGGAGATGATCAATTTCCTGTCGTATGTGCTTCTCCT CAACTCATCAGAGAAACAAAAATTTCGCTGAGAATGATACCACCGTACCG ACTCGCCGTCGTACCGTTATCTTTGTGCAGGTGTGTATTGTTGACGCGAA CATGAACATCGTGCGAGCTTTAACAGGCGTGGGGGAGCTAGCGCTCATCG GCGTTTGGGTGAGCCTCGATTCCATAGAGGCAATAGAGGAGCGGATACGG ACAACGCTCATCAGCACCGGGGCGGCGGACGAACCAGACCTCGATGCGGA CGTACGTGGACTGGTTAGACAGGCCGTAGAGGATATAGAATTTGGCGTGA TGAGTGGGGTCTTCGATTTCACCGTCATAAACAACGGCGACGTAGACGAG TCGATGGAGACGCTGCGCAGGGCTGTTGAATTTGCTACCGCGAAGTGA
back to top

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1397:9000..13447+

>mRNA_H-canaliculatus_F_contig1397.3143.1 ID=mRNA_H-canaliculatus_F_contig1397.3143.1|Name=mRNA_H-canaliculatus_F_contig1397.3143.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=3588bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1397:9000..13447+ (Hapterophycus canaliculatus Oshoro5f female)
ATGTCACGTTGTCGAGCTCATGCGGTGGGAATATTTTTGCTCGCGACGGG
AGCAACCGGATGATGTCACGTTGTCGAGCTCATGCGGTGGGAATATTTTT
GCTCGCGACGGGAGCAACCGGATGGAATTTCGTTGCGCCCAGGATGAGCA
CAATGTCACCGGCGCACAAGCAACCGGTCAGACGCTCTGGCCTTCCCGGG
ATTCACGCACGGCGCCATCGCCGGTTGCCTTACTCTCCGCATGACTATGG
GCTTGGCTATCGAGTCCGAAGCGATGCAAGGTCGCGGCTGGGAAGCTCGT
CGCTGGGCACGATGAAGCAGGAACCAGTGCCAGGAAAGGATCATGAAGGC
GAAAACGTTGCCGATCTTGAGCCTAGACCGTTCCCCAAAGTTGGGGATGT
CGTTCGCTATGAGGGGAAGTGGGAGAACGAGGTGTCCTTCGGAGAGGAAT
TTCGTTGCGCCCAGGATGAGCACAATGTCACCGGCGCACAAGCAACCGGT
CAGACGCTCTGGCCTTCCCGGGATTCACGCACGGCGCCATCGCCGGTTGC
CTTACTCTCCGCATGACTATGGGCTTGGCTATCGAGTCCGAAGCGATGCA
AGGTCGCGGCTGGGAAGCTCGTCGCTGGGCACGATGAAGCAGGAACCAGT
GCCAGGAAAGGATCATGAAGGCGAAAACGTTGCCGATCTTGAGCCTAGAC
CGTTCCCCAAAGTTGGGGATGTCGTTCGCTATGAGGGGAAGTGGGAGAAC
GAGGTGTCCTTCGGAGAGGTTCGTCAGCTCAAGAAGGTGGAGGAAACGGG
GGAGTGGCGAGCGTATGTGCTCCCTTTGGAGTCTATCGGAGATGTTCGTC
AGCTCAAGAAGGTGGAGGAAACGGGGGAGTGGCGAGCGTATGTGCTCCCT
TTGGAGTCTATCGGAGATGATCAGTACGCACGTAAGAAGAATCAAAAGTC
GAAGGCGGAGGATGCCGCTACCCTGAGGATCAGTACGCACGTAAGAAGAA
TCAAAAGTCGAAGGCGGAGGATGCCGCTACCCTGAGGCCTGTACGGGCAT
TTTACGTGCGGAATGTCGACGGTTTCAAGGCCTGTACGGGCATTTTACGT
GCGGAATGTCGACGGTTTCAAGGTAATGCACAATTCTGCGACACGGGAAC
CACGCTATATCAGCGATGCCTACGAGCTTGAAGGGTTTGAACTACCGGTA
ATGCACAATTCTGCGACACGGGAACCACGCTATATCAGCGATGCCTACGA
GCTTGAAGGGTTTGAACTACCGAAAATTGAGGTCGACCCTGTCAAATTTG
CGGCTGAGCTGGAATCGTACGAAGATCTGAAGCGACGACTCGTTGTGGAC
GCCGCTCTCTTCGGCGCAGTTGGCGCGTTTGTCACTCTTCAGAAAATTGA
GGTCGACCCTGTCAAATTTGCGGCTGAGCTGGAATCGTACGAAGATCTGA
AGCGACGACTCGTTGTGGACGCCGCTCTCTTCGGCGCAGTTGGCGCGTTT
GTCACTCTTCAGATATTTGGAGCGAACCAGGGATTGCTTTTCGCGTTGGG
GGCTCTCGCCTCCGTGGCCTACGTCATCCTCCTCGAAAAAACGGCCGACG
ACGTTGCGAGTGGCAAGCAGGATGTCGCCACAAAGCTTAAGGGTGACGCC
CGCTTTGCCGTACCTGTGTTGCTGGTCGTTACTCTGGCTCTGAAGAACTA
CGTTGCCGATCCTGGTGGTGTCGTACTTTTTAAACTGATACCGAAAGAAG
AGTTCGCTGCGGCCATGATCGGGTTTATTGCCCCAGCTAGACTGCCTCTT
CTATACCGCGAGTTCAAGTCGTCGCTCAGGGGCGATGAGGTGTTGGACAT
GCTGCCTGGGTCGCTCGGCCAAGGCCGGGCGATTTTGAGGAATATGGGGG
AACCGACCGGAGCGCCGACAAGTGTGGGGGAAGAGACGGCGGGGCCGAGC
CTCACGCGTGTCATCGTCGTTTCAGGTCCGAAATGTCTTGGTAAGACCTC
TCTCGTCAACAAGATACTGGAGGAAGACAAGCGCCTTGCTCAACCCGCCT
GGTGTACGACGAGGCCGATACGGGCTTCGGAGGCTGAAGGACAAGAGGTA
TTTTTTATGAAGCAGGTGAAGTTTGAGGAACTTGAGCGCAAAGGGGCCTT
TCTACACGTGTACAAGGACAGCAAGGGAGAGTCTTATGGCTTGAGGCTTG
AAGACATCTCGGCAATCGCCGAGGAGGGCAAGATATTTGGAGCGAACCAG
GGATTGCTTTTCGCGTTGGGGGCTCTCGCCTCCGTGGCCTACGTCATCCT
CCTCGAAAAAACGGCCGACGACGTTGCGAGTGGCAAGCAGGATGTCGCCA
CAAAGCTTAAGGGTGACGCCCGCTTTGCCGTACCTGTGTTGCTGGTCGTT
ACTCTGGCTCTGAAGAACTACGTTGCCGATCCTGGTGGTGTCGTACTTTT
TAAACTGATACCGAAAGAAGAGTTCGCTGCGGCCATGATCGGGTTTATTG
CCCCAGCTAGACTGCCTCTTCTATACCGCGAGTTCAAGTCGTCGCTCAGG
GGCGATGAGGTGTTGGACATGCTGCCTGGGTCGCTCGGCCAAGGCCGGGC
GATTTTGAGGAATATGGGGGAACCGACCGGAGCGCCGACAAGTGTGGGGG
AAGAGACGGCGGGGCCGAGCCTCACGCGTGTCATCGTCGTTTCAGGTCCG
AAATGTCTTGGTAAGACCTCTCTCGTCAACAAGATACTGGAGGAAGACAA
GCGCCTTGCTCAACCCGCCTGGTGTACGACGAGGCCGATACGGGCTTCGG
AGGCTGAAGGACAAGAGGTATTTTTTATGAAGCAGGTGAAGTTTGAGGAA
CTTGAGCGCAAAGGGGCCTTTCTACACGTGTACAAGGACAGCAAGGGAGA
GTCTTATGGCTTGAGGCTTGAAGACATCTCGGCAATCGCCGAGGAGGGCA
AGGTGTGTATTGTTGACGCGAACATGAACATCGTGCGAGCTTTAACAGGC
GTGGGGGAGCTAGCGCTCATCGGCGTTTGGGTGAGCCTCGATTCCATAGA
GGCAATAGAGGAGCGGATACGGACAACGCTCATCAGCACCGGGGCGGCGG
ACGAACCAGACCTCGATGCGGACGTACGTGGACTGGTTAGACAGGCCGTA
GAGGATATAGAATTTGGCGTGATGAGTGGGGTCTTCGATTTCACCGTCAT
AAACAACGGCGACGTAGACGAGTCGATGGAGACGCTGCGCAGGGCTGTTG
AATTTGCTACCGCGAAGTGAGTGTGTATTGTTGACGCGAACATGAACATC
GTGCGAGCTTTAACAGGCGTGGGGGAGCTAGCGCTCATCGGCGTTTGGGT
GAGCCTCGATTCCATAGAGGCAATAGAGGAGCGGATACGGACAACGCTCA
TCAGCACCGGGGCGGCGGACGAACCAGACCTCGATGCGGACGTACGTGGA
CTGGTTAGACAGGCCGTAGAGGATATAGAATTTGGCGTGATGAGTGGGGT
CTTCGATTTCACCGTCATAAACAACGGCGACGTAGACGAGTCGATGGAGA
CGCTGCGCAGGGCTGTTGAATTTGCTACCGCGAAGTGA
back to top