mRNA_H-canaliculatus_F_contig1390.3100.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1390.3100.1 vs. uniprot
Match: A0A6H5JHV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHV2_9PHAE) HSP 1 Score: 323 bits (829), Expect = 1.350e-99 Identity = 216/404 (53.47%), Postives = 261/404 (64.60%), Query Frame = 1
Query: 1 MTEPATARFRLDVGRANYAKDREQRRVQQEAYRRDLNAQVADAAKRREQNEQRIRDLEERHEIKS-ATYNPWGKPGSGAPLRHADGTLVTNVKAYHRAKLRGLIAQDLSPNEIGENEQPFGFTLTAR-------GETEYGSPLRTSRSAASHLPNAADKGTGQRSTESAVVSLSPPRRRYRFDRLPPEEQSCLDRQMKERRELEDALLRQVEEKRMRXXXXXXXXXXXXXXXXXXVVRVLAEERAANRSRVRDKNLRAGEAPPALYPETAGADNWARPSEQLQQHQQERRYSSQPRNVAWQQLXXXXXXXXXXXXAGAASKRNRRYSRVGEGVVGDR-RDGVDSNGAGGSAERGRVRGSFAG-GAVAVVGQSDGPGAAAGAGGDRARILLMLRRLEDHGRMLDQ 1182
M EP + FRLDV N+ ++REQRR +QEAYRR+L++Q+AD RRE + +++R+LEERHE++S ATYNPWGKPGSGAPLR ADG LVTNVKAY+RAK RGLIAQDLSPNEIG+NEQPFG+TLT + G E SPLRTSRSAA + G RS ++ VSLSPPR RYRFDRLPPEEQS LDR+MKER+ELE ALL QVEEKR + V+RVLAEERAANR RVRDKNLRAGEAPPAL P + GA + PS Q Q H+ E++ P +R+RR SR E R R G++ GG A R G + G GAV G++ GP AA + DR +LL+LRRLEDHGR+ ++
Sbjct: 5 MAEPMSE-FRLDVPGTNFFREREQRRARQEAYRRELSSQIADTEARRELHARKLRELEERHELQSVATYNPWGKPGSGAPLRQADGALVTNVKAYYRAKQRGLIAQDLSPNEIGDNEQPFGYTLTTKSKMQRFNGIPEDRSPLRTSRSAACAATGKVGE-QGPRSIDAVTVSLSPPRNRYRFDRLPPEEQSYLDRRMKERQELEAALLSQVEEKRAKRELERAAKQAEDKEERARVLRVLAEERAANRHRVRDKNLRAGEAPPALSPSSGGAGDHGWPSPQRQLHRDEQQADITP-------------------------QRHRRNSRFEEVSYAARPRGGLNG---GGRATRLSGGGGWMGDGAVGGAGRAAGPEAAMSSEVDRNSVLLILRRLEDHGRVSEK 378
BLAST of mRNA_H-canaliculatus_F_contig1390.3100.1 vs. uniprot
Match: D8LGW5_ECTSI (Similar to centrosome spindle pole associated protein 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGW5_ECTSI) HSP 1 Score: 319 bits (817), Expect = 9.830e-98 Identity = 227/395 (57.47%), Postives = 261/395 (66.08%), Query Frame = 1
Query: 1 MTEPATARFRLDVGRANYAKDREQRRVQQEAYRRDLNAQVADAAKRREQNEQRIRDLEERHEIKSATYNPWGKPGSGAPLRHADGTLVTNVKAYHRAKLRGLIAQDLSPNEIGENEQPFGFTLTARGETEYGSPLRTSRSAASHLPNAADKGTGQRSTESAVVSLSPPRRRYRFDRLPPEEQSCLDRQMKERRELEDALLRQVEEKRMRXXXXXXXXXXXXXXXXXXVVRVLAEERAANRSRVRDKNLRAGEAPPALYPETAGADNWARPSEQLQQHQQERRYSSQPRNVAWQQLXXXXXXXXXXXXAGAASKRNRRYSRVGEGVVGDRRDGVDSNGAGGSAERGRVRGSFAGGAVAVVGQSDGPGAAAGAGGDRARILLMLRRLEDHGRMLDQL 1185
M EP + FRLDV N ++REQRR +QEAYRR+L++Q+AD RRE + + HE++SATYNPWGKPGSGAPLR ADG LVTNVKAYHRAK RGLIAQDLSPNEIG+NEQPFG+TLT + E SPLRTSRSAA + G RS ++ VSLSPPR RYRFDRLPPEEQS LDR++KER+ELE ALL QVEEKR XXXXXXXXXXXXXXXXX V+RVLAEERAANR RVRDKNLRAGEAPPAL P + GA + PS Q Q H+ E++ AG +R RR S+ E R G NG G + G GAV G++ G AA G DR R+LL+LRRLEDHGR L L
Sbjct: 5 MAEPKSE-FRLDVPGTNCFREREQRRARQEAYRRELSSQIADMEARRELHARXXXXXXXXHELQSATYNPWGKPGSGAPLRQADGALVTNVKAYHRAKQRGLIAQDLSPNEIGDNEQPFGYTLTTKSIPEDRSPLRTSRSAACAATGRVGE-QGLRSIDAVTVSLSPPRNRYRFDRLPPEEQSYLDRRIKERQELEAALLSQVEEKRXXXXXXXXXXXXXXXXXXXRVLRVLAEERAANRHRVRDKNLRAGEAPPALSPGSGGAGDHGWPSPQRQLHRNEQQ-------------------------AGTTPQRQRRNSKFEEASCAARPRG-GQNGVGRATRLSGGGGWMGDGAVGGAGRAAGQEAAMGGEVDRNRVLLILRRLEDHGRTLRNL 371
BLAST of mRNA_H-canaliculatus_F_contig1390.3100.1 vs. uniprot
Match: UPI0018F611BB (centrosome and spindle pole-associated protein 1-like isoform X1 n=5 Tax=Tachyglossus aculeatus TaxID=9261 RepID=UPI0018F611BB) HSP 1 Score: 59.7 bits (143), Expect = 2.590e-5 Identity = 27/82 (32.93%), Postives = 49/82 (59.76%), Query Frame = 1
Query: 88 EAYRRDLNAQVADAAKRREQNEQRIRDLEERHEIKSATYNPWGKPGSGAPLRHADGTLVTNVKAYHRAKLRGLIAQDLSPNE 333
+AY++DL Q+ D ++R++ ++ + E + + YNPWGK G+GAPLR A+G L+T++ H+ + D+ +E
Sbjct: 211 QAYQKDLEQQIRDKEEKRKKEKEELAQYEAKIAAEMRNYNPWGKDGAGAPLRDAEGKLLTDLNTMHKQNIGAYYNPDVRIHE 292 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1390.3100.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1390.3100.1 >prot_H-canaliculatus_F_contig1390.3100.1 ID=prot_H-canaliculatus_F_contig1390.3100.1|Name=mRNA_H-canaliculatus_F_contig1390.3100.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=481bp MTEPATARFRLDVGRANYAKDREQRRVQQEAYRRDLNAQVADAAKRREQNback to top mRNA from alignment at H-canaliculatus_F_contig1390:11859..17870+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1390.3100.1 ID=mRNA_H-canaliculatus_F_contig1390.3100.1|Name=mRNA_H-canaliculatus_F_contig1390.3100.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=6012bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1390:11859..17870+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1390:11859..17870+ >mRNA_H-canaliculatus_F_contig1390.3100.1 ID=mRNA_H-canaliculatus_F_contig1390.3100.1|Name=mRNA_H-canaliculatus_F_contig1390.3100.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2886bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1390:11859..17870+ (Hapterophycus canaliculatus Oshoro5f female)back to top |