mRNA_H-canaliculatus_F_contig1389.3085.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig1389.3085.1
Unique NamemRNA_H-canaliculatus_F_contig1389.3085.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1389.3085.1 vs. uniprot
Match: D8LC14_ECTSI (RF_PROK_I domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC14_ECTSI)

HSP 1 Score: 259 bits (661), Expect = 1.380e-76
Identity = 160/224 (71.43%), Postives = 167/224 (74.55%), Query Frame = 2 
Query:  374 KRKPRHTASTSRSPGDSATTSPGGAKRRLSPGTVPVGGRPT--GAAPWGAPAAGGLGGRGWGQASSYGAGGGRG------GRGPTSRRLHDGRSYTPRPQSLGEIPEDQLQVSFTRASGAGGQNVNKVSTKVEVRFVVSEAEWLPPDVRLRLARQEKGRVNNKGELVVTAQEFRTQKQNRAQALQKLREMINEAWEPAKERKMRTGIGKKGKEIRKQDKLHRSK 1021
            KRKPRH                 GAKRRLS G  P GG     G  PWG  AA G+GGRG GQAS               GRG  +R LHD R YTPRP+S GE+PEDQLQVSFTRASGAGGQNVNKVSTKVE+RFVVSEAEWLP DVRLRLARQEKGR+NNKGELVVTAQEFRTQKQNR+QAL KLREMINEAWEPAKERKMRTGI KKGK IRKQDKLHRSK
Sbjct:   22 KRKPRHAXXX-------XXXXXRGAKRRLSSG--PEGGPAASPGTVPWGTGAAEGVGGRGRGQASXXXXXXXXXXXXXXXGRGTIARGLHDRRPYTPRPKSFGEVPEDQLQVSFTRASGAGGQNVNKVSTKVEMRFVVSEAEWLPYDVRLRLARQEKGRMNNKGELVVTAQEFRTQKQNRSQALAKLREMINEAWEPAKERKMRTGISKKGKAIRKQDKLHRSK 236
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BLAST of mRNA_H-canaliculatus_F_contig1389.3085.1 vs. uniprot
Match: A0A7S2PK85_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PK85_9STRA)

HSP 1 Score: 130 bits (327), Expect = 3.260e-30
Identity = 64/115 (55.65%), Postives = 88/115 (76.52%), Query Frame = 2 
Query:  662 IPEDQLQVSFTRASGAGGQNVNKVSTKVEVRFVVSEAEWLPPDVRLRLARQEKGRVNNKGELVVTAQEFRTQKQNRAQALQKLREMINEAWEPAKERKMRTGIGKKGKEIRKQDK 1006
            IPEDQ+Q+SF RASGAGGQNVNKV+TKVE+RF +  A W+P +VR RL   E GR+NN+G   +T QE RTQ QNR +A++KL++++  +W+  K RK+R G+ KK KE R+++K
Sbjct:  126 IPEDQIQLSFARASGAGGQNVNKVNTKVELRFHIDSANWIPREVRDRLKTNEAGRINNEGYFAITCQENRTQVQNRKEAIKKLQDILKSSWDRPKVRKLRKGLTKKAKENRRENK 240
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BLAST of mRNA_H-canaliculatus_F_contig1389.3085.1 vs. uniprot
Match: B8C3Q8_THAPS (RF_PROK_I domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3Q8_THAPS)

HSP 1 Score: 122 bits (305), Expect = 9.160e-29
Identity = 63/115 (54.78%), Postives = 81/115 (70.43%), Query Frame = 2 
Query:  662 IPEDQLQVSFTRASGAGGQNVNKVSTKVEVRFVVSEAEWLPPDVRLRLARQEKGRVNNKGELVVTAQEFRTQKQNRAQALQKLREMINEAWEPAKERKMRTGIGKKGKEIRKQDK 1006
            IPEDQ+Q SF R+SGAGGQNVNKV TKVE+RF +  A W+P +VR RL   E  R+NN G + V +QE+RTQ QNR  AL+KL +++  +W   K RKMR G+  K KE R++ K
Sbjct:    3 IPEDQIQTSFARSSGAGGQNVNKVETKVELRFHLDSASWIPAEVRERLKTNEANRINNDGFMSVNSQEYRTQVQNRKDALKKLEDILRNSWARPKVRKMRKGLSAKTKENRREMK 117
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BLAST of mRNA_H-canaliculatus_F_contig1389.3085.1 vs. uniprot
Match: K0R9L2_THAOC (RF_PROK_I domain-containing protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R9L2_THAOC)

HSP 1 Score: 123 bits (309), Expect = 8.360e-28
Identity = 70/150 (46.67%), Postives = 100/150 (66.67%), Query Frame = 2 
Query:  599 PTSRRLHDGRSYTPRPQS--LGE--------IPEDQLQVSFTRASGAGGQNVNKVSTKVEVRFVVSEAEWLPPDVRLRLARQEKGRVNNKGELVVTAQEFRTQKQNRAQALQKLREMINEAWEPAKERKMRTGIGKKGKEIRKQDKLHRS 1018
            P S+R +  RS++ R ++   GE        IPE++LQ++F RASGAGGQNVNKV+TKVE+RF +  AEW+P +VR RL   E  R+NN+G + +T+QE RTQ QNR  A++KL++++  +W   K RK R G  +K KE R ++K   S
Sbjct:   96 PPSKRPNPRRSFSSRRRNGDSGEWKVPEHIAIPENELQITFARASGAGGQNVNKVNTKVEMRFHLPSAEWIPSEVRDRLQNNEANRINNEGYMSITSQEHRTQMQNRKDAMKKLQDIVRNSWARPKVRKTRKGPTRKAKEKRLENKKKNS 245
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BLAST of mRNA_H-canaliculatus_F_contig1389.3085.1 vs. uniprot
Match: A0A1Z5KFY9_FISSO (Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KFY9_FISSO)

HSP 1 Score: 119 bits (298), Expect = 1.200e-26
Identity = 63/120 (52.50%), Postives = 87/120 (72.50%), Query Frame = 2 
Query:  659 EIPEDQLQVSFTRASGAGGQNVNKVSTKVEVRFVVSEAEWLPPDVRLRLARQEKGRVNNKGELVVTAQEFRTQKQNRAQALQKLREMINEAWEPAKERKMRTGIGKKGKEIRKQDKLHRS 1018
            +IPE+ L  SF R+SGAGGQNVNKV+++V++R  V+EA W+P +VR RL +Q+  R++ +G L + AQE RTQ  NR  A+QKLR+M+ +AW   KER++R GI  K KE RK+ K  RS
Sbjct:   98 DIPEENLDFSFVRSSGAGGQNVNKVNSQVQLRLNVNEAYWIPYEVRQRLMQQQANRISKEGVLTIAAQEHRTQVANRKAAIQKLRDMLLQAWPRPKERRIRQGISIKTKEQRKEFKRRRS 217
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BLAST of mRNA_H-canaliculatus_F_contig1389.3085.1 vs. uniprot
Match: A0A1Z5KKA6_FISSO (Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KKA6_FISSO)

HSP 1 Score: 118 bits (296), Expect = 2.170e-26
Identity = 64/120 (53.33%), Postives = 85/120 (70.83%), Query Frame = 2 
Query:  659 EIPEDQLQVSFTRASGAGGQNVNKVSTKVEVRFVVSEAEWLPPDVRLRLARQEKGRVNNKGELVVTAQEFRTQKQNRAQALQKLREMINEAWEPAKERKMRTGIGKKGKEIRKQDKLHRS 1018
            +IPE+ L  SF R+SGAGGQNVNKV+++V+VR  V EA W+P +VR RL +Q+  R++ +G L + AQE RTQ  NR  A+QKL+ M+ +AW   KER+MR GI  K KE RK+ K  RS
Sbjct:   97 DIPEENLDFSFVRSSGAGGQNVNKVNSQVQVRLNVHEAYWIPYEVRQRLLQQQANRISKEGVLTIAAQEHRTQVANRKAAVQKLQNMLLQAWPRPKERRMRQGISIKTKEQRKEFKRRRS 216
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1389.3085.1 vs. uniprot
Match: A0A7S2BJ82_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BJ82_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.550e-25
Identity = 61/121 (50.41%), Postives = 85/121 (70.25%), Query Frame = 2 
Query:  659 EIPEDQLQVSFTRASGAGGQNVNKVSTKVEVRFVVSEAEWLPPDVRLRLARQEKGRVNNKGELVVTAQEFRTQKQNRAQALQKLREMINEAWEPAKERKMRTGIGKKGKEIRKQDKLHRSK 1021
            ++PE++L  +FT + G GGQNVNKV+T+   RF V  A+WLP +VR RL  Q++GR+N K EL+V++QE RTQ++NR + L KL+ ++ EA    KER + T I KKGK  R+  K HRSK
Sbjct:   75 DVPENRLVFTFTPSQGPGGQNVNKVNTRAVARFHVPSADWLPVEVRGRLVEQQRGRMNQKDELIVSSQEHRTQRRNRVECLLKLKLLVAEAAVEPKERNLYTDISKKGKGQRRDAKRHRSK 195
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BLAST of mRNA_H-canaliculatus_F_contig1389.3085.1 vs. uniprot
Match: A0A482RXH4_9ARCH (Aminoacyl-tRNA hydrolase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RXH4_9ARCH)

HSP 1 Score: 112 bits (281), Expect = 7.810e-25
Identity = 63/135 (46.67%), Postives = 89/135 (65.93%), Query Frame = 2 
Query:  599 PTSRRLHDGRSYTPRPQSLG-EIPEDQLQVSFTRASGAGGQNVNKVSTKVEVRFVVSEAEWLPPDVRLRLARQEKGRVNNKGELVVTAQEFRTQKQNRAQALQKLREMINEAWEPAKERKMRTGIGKKGKEIRKQ 1000
            P  R L     Y P  Q+    +P D+++ SF R+SG GGQNVNK++TK E+RF V  A+W+ P+++ RL + +  RV+ +G+L++T QE RTQ +NR   LQ+LREM+ EA    KER+M  GIG KGK  RK+
Sbjct:   35 PYIRLLAINDDYVPSIQAKDIVVPLDKVEFSFARSSGPGGQNVNKLNTKAELRFNVLAADWMVPEIKQRLLQYQANRVSKEGDLIITCQEHRTQSKNREDCLQRLREMLAEASIEPKEREMWEGIGDKGKAKRKE 169
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BLAST of mRNA_H-canaliculatus_F_contig1389.3085.1 vs. uniprot
Match: A0A7S1D533_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D533_CYCTE)

HSP 1 Score: 115 bits (287), Expect = 8.880e-25
Identity = 61/132 (46.21%), Postives = 88/132 (66.67%), Query Frame = 2 
Query:  659 EIPEDQLQVSFTRASGAGGQNVNKVSTKVEVRFVVSEAEWLPPDVRLRLARQEKGRVNNKGELVVTAQEFRTQKQNRAQALQKLREMINEAWEPAKERKMRTGIGKKGKEIRKQDKLHRSKASFPCVSMEVS 1054
            EIPED++ +SF+R+ G+GGQNVNKV+TKVE+RF + +A+WLP +VR R+  Q   R+N  G   + + E RTQ+QNR  A  KL+E++  A+   K RK+R GI KK KE   +DK  R +      S+++S
Sbjct:  133 EIPEDRVDISFSRSGGSGGQNVNKVNTKVELRFKLDDADWLPDEVRDRIREQAPNRINKDGVFNIQSSENRTQQQNRRAAFTKLQEIVLRAYPRPKVRKLRKGISKKAKERNLEDKKRRGQVKANRKSVDLS 264
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1389.3085.1 vs. uniprot
Match: A0A8J9S3S9_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S3S9_PHATR)

HSP 1 Score: 110 bits (274), Expect = 1.380e-24
Identity = 60/119 (50.42%), Postives = 79/119 (66.39%), Query Frame = 2 
Query:  662 IPEDQLQVSFTRASGAGGQNVNKVSTKVEVRFVVSEAEWLPPDVRLRLARQEKGRVNNKGELVVTAQEFRTQKQNRAQALQKLREMINEAWEPAKERKMRTGIGKKGKEIRKQDKLHRS 1018
            +PE QL+ SF R+ GAGGQNVNKV+T V+++  +    W+P +VR RL +Q++ RV+ +  LV+   E RTQ  NR  A+ KLR MI +AWE  KER +RTGI  K KE RK  K  RS
Sbjct:    3 VPESQLEFSFIRSGGAGGQNVNKVNTCVQIKLYLPGMTWVPTEVRQRLEQQQRHRVSKEQYLVMQVSEHRTQSANRKTAVDKLRNMIRQAWERPKERSIRTGISVKTKEQRKDFKRKRS 121
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1389.3085.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC14_ECTSI1.380e-7671.43RF_PROK_I domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2PK85_9STRA3.260e-3055.65Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
B8C3Q8_THAPS9.160e-2954.78RF_PROK_I domain-containing protein (Fragment) n=1... [more]
K0R9L2_THAOC8.360e-2846.67RF_PROK_I domain-containing protein n=2 Tax=Thalas... [more]
A0A1Z5KFY9_FISSO1.200e-2652.50Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera s... [more]
A0A1Z5KKA6_FISSO2.170e-2653.33Peptidyl-tRNA hydrolase ICT1 n=1 Tax=Fistulifera s... [more]
A0A7S2BJ82_9STRA1.550e-2550.41Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A482RXH4_9ARCH7.810e-2546.67Aminoacyl-tRNA hydrolase n=1 Tax=archaeon TaxID=19... [more]
A0A7S1D533_CYCTE8.880e-2546.21Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A8J9S3S9_PHATR1.380e-2450.42Hypothetical protein n=2 Tax=Phaeodactylum tricorn... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1389contigH-canaliculatus_F_contig1389:6896..12421 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score263.1
Seed ortholog evalue2.1e-67
Seed eggNOG ortholog2880.D8LC14
KEGG rclassRC01263
KEGG koko:K04121,ko:K15033
KEGG ReactionR05092
KEGG Pathwayko00904,ko01100,ko01110,map00904,map01100,map01110
GOsGO:0000313,GO:0000315,GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0004045,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005761,GO:0005762,GO:0005840,GO:0006412,GO:0006414,GO:0006415,GO:0006417,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0015934,GO:0016043,GO:0016150,GO:0016787,GO:0016788,GO:0019222,GO:0019538,GO:0022411,GO:0031323,GO:0031326,GO:0031974,GO:0032268,GO:0032543,GO:0032984,GO:0032991,GO:0034248,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0052689,GO:0060255,GO:0065007,GO:0070013,GO:0070126,GO:0071704,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0098798,GO:0140053,GO:0140098,GO:0140101,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904,GO:2000112
EggNOG free text desc.translation release factor activity, codon nonspecific
EggNOG OGsCOG1186@1,KOG3429@2759
EC3.1.1.29,4.2.3.19
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03012
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionPeptide chain release factor class I/class II
Ec32 orthologEc-20_004060.1
Exons4
Model size2634
Cds size1185
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1389.3085.1prot_H-canaliculatus_F_contig1389.3085.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig1389 8332..12408 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929132.5037825-UTR-H-canaliculatus_F_contig1389:6895..83311622929132.5037825-UTR-H-canaliculatus_F_contig1389:6895..8331Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1389 6896..8331 -
1696845689.6328351-UTR-H-canaliculatus_F_contig1389:6895..83311696845689.6328351-UTR-H-canaliculatus_F_contig1389:6895..8331Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1389 6896..8331 -
1622929132.5824304-UTR-H-canaliculatus_F_contig1389:12408..124211622929132.5824304-UTR-H-canaliculatus_F_contig1389:12408..12421Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1389 12409..12421 -
1696845689.6927297-UTR-H-canaliculatus_F_contig1389:12408..124211696845689.6927297-UTR-H-canaliculatus_F_contig1389:12408..12421Hapterophycus canaliculatus Oshoro5f femaleUTRH-canaliculatus_F_contig1389 12409..12421 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929132.5209663-CDS-H-canaliculatus_F_contig1389:8331..86591622929132.5209663-CDS-H-canaliculatus_F_contig1389:8331..8659Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1389 8332..8659 -
1696845689.6453867-CDS-H-canaliculatus_F_contig1389:8331..86591696845689.6453867-CDS-H-canaliculatus_F_contig1389:8331..8659Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1389 8332..8659 -
1622929132.534883-CDS-H-canaliculatus_F_contig1389:9183..93571622929132.534883-CDS-H-canaliculatus_F_contig1389:9183..9357Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1389 9184..9357 -
1696845689.6545858-CDS-H-canaliculatus_F_contig1389:9183..93571696845689.6545858-CDS-H-canaliculatus_F_contig1389:9183..9357Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1389 9184..9357 -
1622929132.5523593-CDS-H-canaliculatus_F_contig1389:11023..111081622929132.5523593-CDS-H-canaliculatus_F_contig1389:11023..11108Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1389 11024..11108 -
1696845689.6631756-CDS-H-canaliculatus_F_contig1389:11023..111081696845689.6631756-CDS-H-canaliculatus_F_contig1389:11023..11108Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1389 11024..11108 -
1622929132.5676615-CDS-H-canaliculatus_F_contig1389:11810..124081622929132.5676615-CDS-H-canaliculatus_F_contig1389:11810..12408Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1389 11811..12408 -
1696845689.6836004-CDS-H-canaliculatus_F_contig1389:11810..124081696845689.6836004-CDS-H-canaliculatus_F_contig1389:11810..12408Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig1389 11811..12408 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig1389.3085.1

>prot_H-canaliculatus_F_contig1389.3085.1 ID=prot_H-canaliculatus_F_contig1389.3085.1|Name=mRNA_H-canaliculatus_F_contig1389.3085.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=395bp
MREGGGRAVMALLLASRRGLSFTTSFSAASARARCAIPAVRHLSSQGLVP
SLSRSISRNCYSLPTPVAQAVRQRHGSVRALVAPLSMAAARSSPRDSANS
KINNNSGSNANATSSNSSSNKRKPRHTASTSRSPGDSATTSPGGAKRRLS
PGTVPVGGRPTGAAPWGAPAAGGLGGRGWGQASSYGAGGGRGGRGPTSRR
LHDGRSYTPRPQSLGEIPEDQLQVSFTRASGAGGQNVNKVSTKVEVRFVV
SEAEWLPPDVRLRLARQEKGRVNNKGELVVTAQEFRTQKQNRAQALQKLR
EMINEAWEPAKERKMRTGIGKKGKEIRKQDKLHRSKASFPCVSMEVSPPC
LFERGVGAAFCAGASRCPSGPNGRRFCVASVLLFVAGADCCCFI*
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mRNA from alignment at H-canaliculatus_F_contig1389:6896..12421-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1389.3085.1 ID=mRNA_H-canaliculatus_F_contig1389.3085.1|Name=mRNA_H-canaliculatus_F_contig1389.3085.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=5526bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1389:6896..12421- (Hapterophycus canaliculatus Oshoro5f female)
GCCACTTTGTCTGATGCGCGAGGGTGGTGGCAGGGCAGTCATGGCCCTTT
TACTTGCCAGTAGGAGGGGCTTATCTTTCACGACATCTTTCTCGGCCGCC
TCTGCGCGCGCCCGATGCGCCATACCCGCTGTGCGCCATCTTTCTTCGCA
AGGTCTTGTGCCGAGCCTGTCCAGGTCCATCAGCCGTAACTGCTACTCCC
TGCCGACACCTGTCGCACAAGCAGTGCGACAGCGACATGGCAGCGTCAGA
GCGCTGGTGGCCCCGCTTTCGATGGCTGCCGCGCGCTCCAGTCCCCGTGA
TAGCGCGAACAGCAAGATTAACAACAACAGCGGCAGCAACGCCAACGCTA
CCAGCAGCAACAGCAGCAGCAACAAGAGGAAGCCTCGACACACTGCTTCA
ACCAGCCGGAGCCCCGGCGACAGTGCAACGACCTCGCCCGGTGGCGCAAA
ACGGAGACTCAGCCCGGGGACTGTGCCTGTTGGCGGTAGACCTACTGGAG
CGGCGCCATGGGGTGCTCCTGCAGCAGGGGGGTTGGGCGGTAGAGGTTGG
GGGCAGGCATCGAGTTATGGCGCCGGAGGAGGCAGAGGAGGAAGGGGTCC
AACATCAAGAAGTGAGACGAATGAGTGCATGATGTGCATGTCCCCCCATC
CTCCTAGTGTACTTGTACTTCTTACTGTATTTTTTACCCGGCACACAGAC
TGGAACAGCAGCGCGGCGACACCGTCGACTATTTCAGGCTTTGTGTAACG
TGAGAGACAATCTGGGGTAAGCTTTCCCTTCAATGTGGTCTACCTGAAGC
TTTCGAGAGGCTCGAGAAAGGCCGTTTTTTTTTGCCGGACTGGCTCTTTT
TCACCCACCCCGTCCATTTTGGTTGTTGCCGACACAGGAGACATCATGCA
TTGAGGTTGAGAGTTACGGCGGACTGGCCTCAGACGGCGCTGCCTCAGCG
CTTGCGAGCTCTCATCGCAACTGCAATACTCCCCATCCCGTGGTGCCCAG
AAGGGCGTGCTCTATCGCATATCTTCGCCCGCTCTCTCGTACCCGCGAGG
AGGGAGACTGACCCACACAACCATCTTTGATACCATCGCCCTCCCGATGC
GCGTGCCTAGACAGCTCGTCTACCGTAGTCCAAGAACGTGAAGTCGCTTG
ACTCGCCCGGAAATCTGCCGCAGTAATGGACTACTGAGGGAAACAATTTT
TTCGAGGAGACATCCCACAAGGCCATCATATCATATACATACGACTTCGT
AACATGTTTCGTCGGACCGCGGTGCGTTTTGGGTCCGCCTTGCCATTCCA
CCGCAATCCGCAGGACTGCACGATGGCCGCTCCTACACCCCTCGGCCCCA
GAGCTTGGGAGAGATTCCTGAGGACCAGCTGCAGGTCTCCTTCACAAGGT
GAGGTAGCAAGTTGCGTGTGGGAGGCTGTCTTACCCGCACTGCCACACTG
CCGCTGTGTCCTGCTCTCGATCGATTCAGATCACAAGTACTTTCGCCTTC
AGATGCCAGGCTTTCTGTCAACTGTTCAACCCCCCCCGCACCGAAGGCCA
ACGCGGAAAAACAATCAACACCACAAACTGTAGATGTGCACCAGTCTGGC
TCCATCTTTGGAGTGCAAGCCTGACCTGACGTGTTGGAATACAATGAATT
CTGAAGCAATTCTGTTCAACTCCAGGCAAATTTGGGGACAGCCATACACG
GTCGGGGGTGATGCAAGCATTTTTTCTGACCATGGTGGCAAGGGGACGTC
TAATTTGATACACCGAAACTAGGTCATTTCGACACTTTCGTTCGTGACAT
CTCCTGGATAATCTCTTTCAACCGATTTTTTGTCTCGTTCACGGAAATAA
CGCTAATCTTTCGAGCACTCCTCATTAGTAAAGATAGGAATTTCCGCAGC
CCCCCCCCCCCCCGCCCAAAGCAGCCTTTGCCCGAAGCCCTGAATGCCAC
CCTGGAAGAGCTCGCCCAGAGTTCGCCAATTTTCTGCTTTTCAAGTTCCG
ACACATCGACGTCGCATCTTCTGATTATCGCATCCTTTCATCCCTTCGTT
CAGGGTTCCCCCATCTTTTCGGCACCATGAAGTTAGTTACGTTCGACAAA
AATACGGGAAACCGGAAGCAGCTCGTTGTGTTTGGCCACACGGGATAAGC
CTGCGAGTCCTCTTCCTTTTCCGGCCTCGTGCGTCTCGCCCTCCTGTAGG
GCAAGTACAAGTCCCCTACCGGGAACTGAGAGTTTTTCTCAAGTTTCTTC
GCGGGGTCCGTCGCGCTGGGAGACAAATCCTAATTCCTATCTCATCTAGC
AGTTTTCATTCGTATCCAGGAGCTCTTCGCTATCTACCCTCCTCTTGGAG
CCAGCCTACAAATCCCTAGGAGTCGCTTCTTCGTATCCTGTATGCCACGT
CTTCCTTATATAAGTCTTCAATTTGTGTGGTAGGCATTTCTTCTTCCTTG
GTGCCTTGATGCCTTAATGCCCTCTTCAATGTGTTATTCTGTTTTTTTAA
GTTTCTTTTCGTTGACTTATTCCATCAACGCTCCAAGTCCCGGTCCGTCG
CTAGATGTAAAAGCCGCATTCGGACATGCGGCGCAGTATCTACGGCGGTT
TCAACTGTTTATTTTTTAATTGTGGACGTTCTCACGGAGCTCTAGAATCC
GTAATATTCCGTCAAATAGCACAGTCCGGCTCTCAAGAGAACCACCCGGA
GCAGGGCAAGCGGATCCCTTGCGCGGCAATCTCCGAGAACATGCCTTCCA
ACAACAAGTGTCTGATTGATTTTGGTTGCTGGAAGCGCTGCTGACAAGAC
GCCCAGAAGGAAGCTGATTGTGGGAGATAAGTCTGTCGTTGTTGTTGTTG
TTGTTGTTGTTGTTGTTGTTGCCTTCGCACCAAAAATCCCATCCGGAGTG
TTCAAACGCGAAATAACTAAGAGAAGCAATACATAGAGTACCCCCCCCCT
CCCCTTTAAGGGGTCTAGAGAACCTCAGATGTAGGTTCATCTTGACGCAT
ACCGAGGGCGGCACTCACGACCCCCCGACCCCCATCCTCTTTCCGGCCCG
GCTTCGCCGCTCAGAGCATCGGGGGCGGGAGGCCAAAATGTCAACAAGGT
TAGCACGAAAGTGGAGGTGCGCTTTGTGGTGTCGGAGGCGGAGTGGTTGC
CGCCGGACGTTCGACTCCGGCTGGCACGGCAAGAGAAAGGGCGGGTCAAC
AACAAGGGGGAGTTGGTCGTGACTGCGCAGGAGTTCAGGTGAGGCGTTTT
TTGTCTGTTGCTGCGGCACGAACGAGGGGACACATCCTTCGGGCACGGCA
TCACTCGAAATATCGTTTGGCTTCGTGCAGCAAGGAGGCGTTGATTTGGT
TGTGGGAATGAGCATGCTTGAGGGGAAGGGCTTCTTTCGAGGTGCAGAGC
CAAAGCCTTGTGGCGTCAAGGATGGCAGCTCGTTTGAGTTGACCGAATCC
TGTGCAGCTTCCGGCGAGCGAGCGGGGTAGGGCTACAGCAGCAGCCGGTC
GGGCAGGTTATCCGGACCGCGAGTCGATCGGCCGCGGTGTCCACACTTTC
CCCTTCAGCTGCTGTCGCTCGTGCTGCTTTCGTACAGCTCTGCCTGTCGT
CGCTGGTTGCTTCGGCTCGCGTTCGTGGAGGCAATCGTGTGTCGCCGCGT
AACAGAACCGCAAATTCCACCCGGGTAGACAGCGCAGCCCGCCCGGGGTA
GATGCATGTTGGGATTCTCATGGACTACCTCCGTTCCTTTCATGTTTGCC
CGGGACCGCCAGGACCCAGAAGCAGAATCGAGCTCAGGCGCTGCAAAAGC
TCCGGGAAATGATCAACGAGGCGTGGGAGCCGGCAAAGGAAAGGAAAATG
CGCACCGGGATCGGGAAGAAAGGGAAAGAGATTCGGAAGCAAGACAAGCT
CCACCGATCCAAGGCGAGCTTCCCGTGCGTGAGCATGGAGGTTTCGCCCC
CGTGTCTTTTCGAACGGGGCGTTGGGGCGGCGTTTTGTGCGGGTGCCTCG
CGGTGCCCCTCTGGGCCGAACGGCCGTCGTTTTTGTGTTGCGTCCGTCCT
TCTTTTCGTTGCTGGTGCTGATTGCTGCTGTTTCATCTAGATCTGAGCGG
TCGCTGCCCCTCTGCTGAGTCGGTGCGTGCCTTCGTCGCCTTCGCTCGTA
CTCTGGGAGGCTGTGCGCTGGCACGCGCTCGTTGATCGTGAATCGGTGGT
CGTGTGTTTTTCACCTCGATGCGATGGGATAGATGGGTGGTGGCGGTGTC
GAGGCGGCGACGATGACCGTGGTGTTCGTTTTCCGAAGCCCTGCGACACT
AGACGGTTGTTCCCATGGAGAGCGGATCGAACTCAAATATTCCCTTCGAT
TTCTTTACCACGCGTGCGCTCACGATCAACCTCTTGCACATCCCTATGCC
CCCTCCCGACCTTGAATTCCGTCCGCTCTCGCCGACACGCCCACCTTTTG
GACCACCTTTTGAATCGCAGGTGAAGGCCGGCCGCAGTAAGCTCAGCTCG
AGAGATTACGATTAGTACCGTCAGGCTTACCCGGCAACTCAGGCGCGAGC
AGTCTCCATCTTGGGCTGCCGAAACAGTGCGCCTCCGATTAATGAGTCCA
GAAAGGATACCTTGATCTTGCGCATGAGCGACAACTAAATTTGGAATGGC
TTGGTACTCGACTGAAATGGCAAGATTTGAGCTCGATATCCTCTCCAAGT
CGTTTTCCAGGAGTGTAAAAGCTTTTCTTGTTTTGATAAGCTTCCCCTCG
TGGAGACTCGTCTATCAATAGTCTTAGCAATGGTTTTCACGATGTCAACT
CGAGAAGGAGTTTTTATTGCTGATGCTTTTGCATCAAAGTAGACCGCATG
CTACTTGCGACTTTTATTACGCGGCGTGGACATTACTCATGGATGAACGG
TCCTTCTTGCGGCAGTAGCATTCCCCATGGTGATGCCCGAAGTTGTCGAT
CTTGCACTACTGCTTCGGGTTGTTCACCAGGCGTTTGCCAATGAGGTCAG
AGATCTATCTGGAACCTTTCTCCCGTGTAGTTCGCCTTTTATGTTCGCGT
AGGTTCTATAGCCGAGGACCTTGCAGTCTGTTTGCATCTGCTGCTTCCAT
GGATGTACGAGTACACTTGGGTCACCCTGAAGGCACACCGCAAAGATTTA
GACTCTGTATCCTCGAAAGTACTCGATTTTTTTGGAGTATCGGAATCTAG
AGGAGTAATGATTGGTTGTTGATGGTACGGGAACGAACCCACACACGCAG
GGCTAAAACACATTTGAAAGGTTTGATCTCGATGGACGTTACGATATTGA
GGACATGGAAGCTTGAACCATTCGTGTTTACGAGGCAAAACAAAGGGGGA
GCGCGCTGGAGGCGATTTGAATGATGCTTGGATGCAACGCAAGTGCGGCA
TACATTTAGCCGACTAATCGTGGCGCACGATGGCGTTGTCTGCACATGTG
TCCAATTTCGGATAAACCAGAAAGGTAAGGAAATACCCGTCGCCAACGCA
AAAACACCTAACCAAATGATTTGGCC
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1389:6896..12421-

>mRNA_H-canaliculatus_F_contig1389.3085.1 ID=mRNA_H-canaliculatus_F_contig1389.3085.1|Name=mRNA_H-canaliculatus_F_contig1389.3085.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=2370bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1389:6896..12421- (Hapterophycus canaliculatus Oshoro5f female)
ATGCGCGAGGGTGGTGGCAGGGCAGTCATGGCCCTTTTACTTGCCAGTAG
GAGGGGCTTATCTTTCACGACATCTTTCTCGGCCGCCTCTGCGCGCGCCC
GATGCGCCATACCCGCTGTGCGCCATCTTTCTTCGCAAGGTCTTGTGCCG
AGCCTGTCCAGGTCCATCAGCCGTAACTGCTACTCCCTGCCGACACCTGT
CGCACAAGCAGTGCGACAGCGACATGGCAGCGTCAGAGCGCTGGTGGCCC
CGCTTTCGATGGCTGCCGCGCGCTCCAGTCCCCGTGATAGCGCGAACAGC
AAGATTAACAACAACAGCGGCAGCAACGCCAACGCTACCAGCAGCAACAG
CAGCAGCAACAAGAGGAAGCCTCGACACACTGCTTCAACCAGCCGGAGCC
CCGGCGACAGTGCAACGACCTCGCCCGGTGGCGCAAAACGGAGACTCAGC
CCGGGGACTGTGCCTGTTGGCGGTAGACCTACTGGAGCGGCGCCATGGGG
TGCTCCTGCAGCAGGGGGGTTGGGCGGTAGAGGTTGGGGGCAGGCATCGA
GTTATGGCGCCGGAGGAGGCAGAGGAGGAAGGGGTCCAACATCAAGAAAT
GCGCGAGGGTGGTGGCAGGGCAGTCATGGCCCTTTTACTTGCCAGTAGGA
GGGGCTTATCTTTCACGACATCTTTCTCGGCCGCCTCTGCGCGCGCCCGA
TGCGCCATACCCGCTGTGCGCCATCTTTCTTCGCAAGGTCTTGTGCCGAG
CCTGTCCAGGTCCATCAGCCGTAACTGCTACTCCCTGCCGACACCTGTCG
CACAAGCAGTGCGACAGCGACATGGCAGCGTCAGAGCGCTGGTGGCCCCG
CTTTCGATGGCTGCCGCGCGCTCCAGTCCCCGTGATAGCGCGAACAGCAA
GATTAACAACAACAGCGGCAGCAACGCCAACGCTACCAGCAGCAACAGCA
GCAGCAACAAGAGGAAGCCTCGACACACTGCTTCAACCAGCCGGAGCCCC
GGCGACAGTGCAACGACCTCGCCCGGTGGCGCAAAACGGAGACTCAGCCC
GGGGACTGTGCCTGTTGGCGGTAGACCTACTGGAGCGGCGCCATGGGGTG
CTCCTGCAGCAGGGGGGTTGGGCGGTAGAGGTTGGGGGCAGGCATCGAGT
TATGGCGCCGGAGGAGGCAGAGGAGGAAGGGGTCCAACATCAAGAAGACT
GCACGATGGCCGCTCCTACACCCCTCGGCCCCAGAGCTTGGGAGAGATTC
CTGAGGACCAGCTGCAGGTCTCCTTCACAAGGACTGCACGATGGCCGCTC
CTACACCCCTCGGCCCCAGAGCTTGGGAGAGATTCCTGAGGACCAGCTGC
AGGTCTCCTTCACAAGAGCATCGGGGGCGGGAGGCCAAAATGTCAACAAG
GTTAGCACGAAAGTGGAGGTGCGCTTTGTGGTGTCGGAGGCGGAGTGGTT
GCCGCCGGACGTTCGACTCCGGCTGGCACGGCAAGAGAAAGGGCGGGTCA
ACAACAAGGGGGAGTTGGTCGTGACTGCGCAGGAGTTCAGAGCATCGGGG
GCGGGAGGCCAAAATGTCAACAAGGTTAGCACGAAAGTGGAGGTGCGCTT
TGTGGTGTCGGAGGCGGAGTGGTTGCCGCCGGACGTTCGACTCCGGCTGG
CACGGCAAGAGAAAGGGCGGGTCAACAACAAGGGGGAGTTGGTCGTGACT
GCGCAGGAGTTCAGGACCCAGAAGCAGAATCGAGCTCAGGCGCTGCAAAA
GCTCCGGGAAATGATCAACGAGGCGTGGGAGCCGGCAAAGGAAAGGAAAA
TGCGCACCGGGATCGGGAAGAAAGGGAAAGAGATTCGGAAGCAAGACAAG
CTCCACCGATCCAAGGCGAGCTTCCCGTGCGTGAGCATGGAGGTTTCGCC
CCCGTGTCTTTTCGAACGGGGCGTTGGGGCGGCGTTTTGTGCGGGTGCCT
CGCGGTGCCCCTCTGGGCCGAACGGCCGTCGTTTTTGTGTTGCGTCCGTC
CTTCTTTTCGTTGCTGGTGCTGATTGCTGCTGTTTCATCTAGGACCCAGA
AGCAGAATCGAGCTCAGGCGCTGCAAAAGCTCCGGGAAATGATCAACGAG
GCGTGGGAGCCGGCAAAGGAAAGGAAAATGCGCACCGGGATCGGGAAGAA
AGGGAAAGAGATTCGGAAGCAAGACAAGCTCCACCGATCCAAGGCGAGCT
TCCCGTGCGTGAGCATGGAGGTTTCGCCCCCGTGTCTTTTCGAACGGGGC
GTTGGGGCGGCGTTTTGTGCGGGTGCCTCGCGGTGCCCCTCTGGGCCGAA
CGGCCGTCGTTTTTGTGTTGCGTCCGTCCTTCTTTTCGTTGCTGGTGCTG
ATTGCTGCTGTTTCATCTAG
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