mRNA_H-canaliculatus_F_contig13850.3057.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig13850.3057.1
Unique NamemRNA_H-canaliculatus_F_contig13850.3057.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig13850.3057.1 vs. uniprot
Match: D8LM18_ECTSI (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM18_ECTSI)

HSP 1 Score: 627 bits (1616), Expect = 3.960e-216
Identity = 314/333 (94.29%), Postives = 325/333 (97.60%), Query Frame = 1
Query:    1 QVADVVAEVEKTGVLKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQAYYERQGEMGIAADLALLQAEHLYYQHESIARAVHKAQSFTNKFGKTEDLHPACTVASASAPSDGALDVTKGHPAAFLGQPAVEHEYADYTAQLKRLCVTVYQHGDDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQADISTQILYNRMMVTLGLCAFRKGLINEAHDCLRDVCSSRVKELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVMSKHFRRYVDIFNRQV 999
            +VADV+AEVEKTGVLKVVGSLS YMIRLGDEYTKSLQ+INPHTQEYIRRLKDESVVV+LA KVQAYYERQGEM + ADLALLQAEHLYYQHESIARAVHKAQSFTNKFGKTEDLHPACTVASASAPSDGALDVTK HP AFLGQP+V+HEYADYT QLK LCVTVYQHGDDRCRTRAMLCHITHHALHDRF+PARDLLLMSHLQDNISQADISTQILYNRMMVTLGLCAFRKGLI++AHDCLRDVCSSRVKELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVMSKHFRRY+DIFNRQV
Sbjct:  453 EVADVLAEVEKTGVLKVVGSLSQYMIRLGDEYTKSLQNINPHTQEYIRRLKDESVVVDLAAKVQAYYERQGEMSVVADLALLQAEHLYYQHESIARAVHKAQSFTNKFGKTEDLHPACTVASASAPSDGALDVTKAHPGAFLGQPSVDHEYADYTEQLKNLCVTVYQHGDDRCRTRAMLCHITHHALHDRFHPARDLLLMSHLQDNISQADISTQILYNRMMVTLGLCAFRKGLIHDAHDCLRDVCSSRVKELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVMSKHFRRYIDIFNRQV 785          
BLAST of mRNA_H-canaliculatus_F_contig13850.3057.1 vs. uniprot
Match: A0A835YUE3_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUE3_9STRA)

HSP 1 Score: 426 bits (1096), Expect = 7.670e-138
Identity = 219/331 (66.16%), Postives = 257/331 (77.64%), Query Frame = 1
Query:    7 ADVVAEVEKTGVLKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQAYYERQGEMGIAADLALLQAEHLYYQHESIARAVHKAQSFTNKFGKTEDLHPACTVASASAPSDGALDVTKGHPAAFLGQPAVEHEYADYTAQLKRLCVTVYQHGDDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQADISTQILYNRMMVTLGLCAFRKGLINEAHDCLRDVCSSRVKELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVMSKHFRRYVDIFNRQV 999
            A   A  + TG +K VG+L+ ++ RL +EYTKSLQ INPHT EYI RLKDES +V+LAG +Q YY R G+   AA +ALLQ EHLYY+H+SIA AVH++Q+FT  +G    LHPAC     + P+  + D    HPAA LG P VE    DY A ++ LCV +Y+HG DR +TRAMLCHITHHALH RF+ ARDLLLMSHLQDNIS  D+ TQILYNRMMVTLGLCAFR GLI +AHDCLRDVCSSRVKELLAQG+Q NRFQ+KNPEQEKAERRRQ PYHMHINLDLLECCHLT+AML EVP MA+E  E+RRR +SK FRR++D F+ QV
Sbjct:  466 ASAAAPQQTTGTVKAVGNLATFVQRLEEEYTKSLQKINPHTAEYILRLKDESAIVQLAGAIQGYYVRAGDFDRAATVALLQVEHLYYKHDSIALAVHRSQAFTAVYGSPAMLHPACL---GTGPAATSADYAVVHPAAALGAPTVEVVPMDYAALMRDLCVFLYKHGGDRAKTRAMLCHITHHALHGRFHAARDLLLMSHLQDNISMVDVDTQILYNRMMVTLGLCAFRLGLIADAHDCLRDVCSSRVKELLAQGIQQNRFQEKNPEQEKAERRRQMPYHMHINLDLLECCHLTAAMLREVPTMARERGEIRRRHISKLFRRHMDNFDHQV 793          
BLAST of mRNA_H-canaliculatus_F_contig13850.3057.1 vs. uniprot
Match: A0A7S2BS49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BS49_9STRA)

HSP 1 Score: 392 bits (1006), Expect = 4.810e-128
Identity = 201/325 (61.85%), Postives = 244/325 (75.08%), Query Frame = 1
Query:   28 EKTGVLKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQAYYERQGEMGIAADLALLQAEHLYYQHESIARAVHKAQSFTNKFGKTEDLHPACTVASASAPSDGALDVTKGHPAAFLGQPAVEHEYADYTAQLKRLCV-TVYQHGDDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQADISTQILYNRMMVTLGLCAFRKGLINEAHDCLRDVCSSRVKELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVMSKHFRRYVDIFNRQV 999
            E    +K++G+L  ++ RL +EYTK+L +INPHT EY+ RL+ E+ +  L    Q YYER G+MG AA +ALL+ EH YY+H+SIA AV KAQ F  K+G+  DLHPAC   +A+  S+   +    HPAA  G+PA++  + D    +K LC   VY+HGDDR RTRAMLCHI HHALHDRFY ARDLLLMSHLQ+NI   D++TQIL+NR MV LGLCAFR GLI EAH CL D+CSSR KELLAQGVQ  R+ DKNPEQEKAERRRQTPYHMHINL+LLE CHLT+AMLLEVPNMA E    R RV+S+HFR+Y+D F+RQV
Sbjct:  220 EDENTIKIIGNLVTFVKRLEEEYTKALIAINPHTSEYVTRLRMEAQLTHLCATTQQYYERVGDMGQAAVMALLRIEHTYYKHDSIAEAVFKAQKFAEKWGQYADLHPACLSPTAALSSEVKPETL--HPAAMGGKPAIDAVFEDQAVLIKELCHRVVYKHGDDRTRTRAMLCHIAHHALHDRFYDARDLLLMSHLQENIGHTDVTTQILFNRAMVMLGLCAFRLGLIFEAHQCLSDICSSRYKELLAQGVQSMRYSDKNPEQEKAERRRQTPYHMHINLELLEGCHLTAAMLLEVPNMATEELSERPRVISRHFRKYMDFFDRQV 542          
BLAST of mRNA_H-canaliculatus_F_contig13850.3057.1 vs. uniprot
Match: A0A7S4E4E4_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E4E4_9STRA)

HSP 1 Score: 385 bits (989), Expect = 7.370e-123
Identity = 203/342 (59.36%), Postives = 244/342 (71.35%), Query Frame = 1
Query:    1 QVADVVAEVEKTGVLKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQAYYERQGEMGIAADLALLQAEHLYYQHESIARAVHKAQSFTNKFGKTEDLHPACTVASASAPSDGALDVTKGHPAAFLGQPAVEH-EYADYTAQLKRLCVTVYQHGDDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQADISTQILYNRMMVTLGLCAFRKGLINEAHDCLRDVCSSRVKELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTEL--------RRRVMSKHFRRYVDIFNRQV 999
            +V D  A  ++ G +KVVG+L  Y+ RL DEY KSLQ INPHTQEY+ RL+DE  + ELAG +QAYY+R G    AA +ALL+ EH+YY+H+SIA AV  AQ+F   +G  +D+H A   A+A     G   V K HP ++LG P     +  D    LK LC  VY HGDDRCRTRA+LCH+ HHALH RF+ ARDLLLMSHLQ+    ADI TQILYNR MV LGLCAFR GL+++AH CL ++CSSRVKELLAQGVQ  R+ DK+ EQEKAERRRQTPYHMH+NLDLLECCHLTSAMLLEVP M  E            R RV S+HFR+++DIF+RQV
Sbjct:  420 EVIDTEAPPDEAGCVKVVGNLLTYVTRLEDEYVKSLQHINPHTQEYVARLRDERPLEELAGSIQAYYDRSGSTETAATVALLRIEHMYYKHDSIAEAVRDAQAFRAAWGSRDDVHAASRKATA-----GVSTVEKSHPGSWLGAPTTPSTDSCDTAKSLKELCGYVYDHGDDRCRTRALLCHVAHHALHGRFHAARDLLLMSHLQEVAHDADIETQILYNRAMVLLGLCAFRSGLVHDAHSCLAEICSSRVKELLAQGVQSARWSDKSDEQEKAERRRQTPYHMHVNLDLLECCHLTSAMLLEVPAMVVEEARNKQLRGAPPRTRVTSRHFRKHMDIFSRQV 756          
BLAST of mRNA_H-canaliculatus_F_contig13850.3057.1 vs. uniprot
Match: A0A7S2HV13_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HV13_9STRA)

HSP 1 Score: 378 bits (970), Expect = 7.760e-120
Identity = 196/325 (60.31%), Postives = 239/325 (73.54%), Query Frame = 1
Query:   28 EKTGVLKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQAYYERQGEMGIAADLALLQAEHLYYQHESIARAVHKAQSFTNKFGKTEDLHPACTVASASAPSDGALDVTKGHPAAFLGQPAVEHEYADYTAQLKRLCVTV-YQHGDDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQADISTQILYNRMMVTLGLCAFRKGLINEAHDCLRDVCSSRVKELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVMSKHFRRYVDIFNRQV 999
            E    ++++G+L  ++ RL +EYTK+LQ INPHT EY+ RL+ ES +V+L   VQ YYER  +M  AA +ALL  EH+YY H+SIA AV KAQ F  K+G   DLHPAC  + A +  DG  D    HPA+  G+P +  +  D  A ++  C  V Y+HGDDR RTRAMLCHI HHA HDRFY ARDLLLMSHLQ++I  AD+ TQIL+NR MV LGLCAFR GLI +AH CL D+CSSRVKELLAQG+Q  R+ +KNPEQE AERRRQTPYHMHINLDLLE CHLT+AMLLEVPNMA E    R RV+S+HFR+++D + RQV
Sbjct:  428 EDANKIQIIGNLVNFVNRLDEEYTKALQKINPHTVEYVVRLRMESQLVKLCTTVQQYYERIEDMKNAASVALLCIEHVYYMHDSIAAAVFKAQKFAEKWGAYSDLHPACMSSDAGS-EDGKFDAASVHPASIGGKPTITDKLEDVGAFIQEQCHRVIYKHGDDRTRTRAMLCHIAHHAAHDRFYEARDLLLMSHLQEHIGHADVHTQILFNRAMVMLGLCAFRAGLIWDAHQCLSDICSSRVKELLAQGLQSMRYSEKNPEQENAERRRQTPYHMHINLDLLEGCHLTAAMLLEVPNMATEDVSERPRVISRHFRKHMDFYERQV 751          
BLAST of mRNA_H-canaliculatus_F_contig13850.3057.1 vs. uniprot
Match: A0A7S2UU87_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU87_9STRA)

HSP 1 Score: 371 bits (952), Expect = 5.460e-117
Identity = 191/320 (59.69%), Postives = 237/320 (74.06%), Query Frame = 1
Query:   43 LKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQAYYERQGEMGIAADLALLQAEHLYYQHESIARAVHKAQSFTNKFGKTEDLHPACTVASASAPSDGALDVTKGHPAAFLGQPAVEHE-YADYTAQLKRLCVTVYQHGDDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQADISTQILYNRMMVTLGLCAFRKGLINEAHDCLRDVCSSRVKELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTELRRRVMSKHFRRYVDIFNRQV 999
            ++VVG+LS YM R+ +EY KSLQ INPHTQEYI RLKDE+++V LA KVQAYY R G    AA + L+  EH YY+H+SIA AV +AQSFT  +G    LHP C    A    +G LD    HPA+ LG P  +     D   ++  + + +Y+HGDDR RTRAMLCHITHHA+HDRF+ ARDLL MSHLQD I   D+STQIL+NR MV LGLCAFR G+I E H C+ +VCS R KELLAQGVQ +R+ ++NPE+EKAE+RRQ PYHMHINLDLLECCHLT+AMLLEVPN+A +    R++V+S+HFR+  DI++RQV
Sbjct:  476 IQVVGTLSAYMRRINEEYVKSLQHINPHTQEYIARLKDEALIVALAAKVQAYYVRVGMPTEAASMCLMGLEHTYYKHDSIALAVQRAQSFTALWGDRALLHPGCV---ACTKMEGKLDAETCHPASALGTPTCDFSSLPDMAQEVSDMALFIYRHGDDRLRTRAMLCHITHHAMHDRFHQARDLLFMSHLQDTIGHTDVSTQILFNRAMVLLGLCAFRAGMILEGHYCMTEVCSGRTKELLAQGVQQSRYHERNPEKEKAEKRRQMPYHMHINLDLLECCHLTAAMLLEVPNIALDPG--RKKVISRHFRKCRDIYSRQV 790          
BLAST of mRNA_H-canaliculatus_F_contig13850.3057.1 vs. uniprot
Match: F0Y6I4_AURAN (PCI domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6I4_AURAN)

HSP 1 Score: 364 bits (935), Expect = 9.960e-116
Identity = 190/321 (59.19%), Postives = 233/321 (72.59%), Query Frame = 1
Query:   43 LKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQAYYERQGEMGIAADLALLQAEHLYYQHESIARAVHKAQSFTNKFGKTEDLHPACTVASASAPSDGALDVTKGHPAAFLGQPAVEHEYADYTAQLKRLCVTVYQHGDDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQADISTQILYNRMMVTLGLCAFRKGLINEAHDCLRDVCSSRVKELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTEL--RRRVMSKHFRRYVDIFNRQV 999
            +KVVG+L  ++ RL DEY KSLQ INPHT EY+ RL+DE+ + +LA  VQAYY R G+   AA +ALL+ EH+YY+HESIA AV  AQ++      +   HP   + +A+A +    D   G                D +A +++LC  VY HGDDRCRTRA+LCH+ HHALH RFY ARDLLLMSHLQD    +D+ TQILYNR MV LGLCAFR GLI++AH CL ++CSSRVKELLAQG+Q  RF DKNPEQEKAERRRQTPYHMHINLDLLECCHLT+AMLLEVPNM+ E+      +R +S+HFR+++DIFNRQV
Sbjct:  361 VKVVGNLLTFLARLEDEYVKSLQRINPHTHEYVSRLRDEAPLTDLAAGVQAYYVRVGDDKAAATVALLRVEHMYYKHESIASAVRDAQAYRANERDSSKSHPGAWLGAATAAATAPDDEVVG----------------DASASVRKLCEYVYAHGDDRCRTRALLCHVAHHALHGRFYVARDLLLMSHLQDTAYMSDVETQILYNRSMVMLGLCAFRNGLIHDAHACLAEICSSRVKELLAQGMQSARFSDKNPEQEKAERRRQTPYHMHINLDLLECCHLTAAMLLEVPNMSVEAGGAGGHKRPISRHFRKHLDIFNRQV 665          
BLAST of mRNA_H-canaliculatus_F_contig13850.3057.1 vs. uniprot
Match: A0A7R9W1A8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W1A8_9STRA)

HSP 1 Score: 355 bits (910), Expect = 2.130e-114
Identity = 196/327 (59.94%), Postives = 233/327 (71.25%), Query Frame = 1
Query:   49 VVGSLSLYMIRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQAYYERQGEMGIAADLALLQAEHLYYQHESIARAVHKAQSFTNKFGKTEDLHPACTVASASAPSDGALDVTKGHPAAFLGQPAVEHEYA--DYTAQLKRLCVTVYQHGDDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQA-DISTQILYNRMMVTLGLCAFRKGLINEAHDCLRDVCSSRVKELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTE-------LRRRVMSKHFRRYVDIFNRQV 999
            VVGSLSL++ RL +EYTKSLQ I+PHT EY+ RL+DE+ +VEL  KVQ Y+ R G    AA+LA L+ EHLYY+H++IA  V +A  F   +G+   LHPAC  A A     G  D  K HPAA LG+P+V       D +  +  LC  VY+HG DR +TRAMLCHI HHALHDRF  ARDLLLMSHLQD IS A D+ST IL+NRMMVTLGL AFR G I +AH CL DVCS RV+ELLAQGV   RF DK  EQEKAE+RRQTPYHMH+NLDLLE CHL+SAMLLEVPNMA    +        R RV+S+ FR++ DI++RQV
Sbjct:  127 VVGSLSLHVTRLDEEYTKSLQRISPHTSEYVERLRDEAGLVELLAKVQGYFTRIGSNEEAAELAQLRVEHLYYRHDTIAEGVDRAALFHETYGEAGLLHPACVSADADD-FKGNGDAEKCHPAASLGRPSVAEASVTVDSSKVINDLCTYVYRHGSDRSKTRAMLCHIFHHALHDRFLEARDLLLMSHLQDTISNAGDVSTMILFNRMMVTLGLSAFRLGRIWDAHQCLSDVCSGRVRELLAQGVSTGRFSDKTAEQEKAEKRRQTPYHMHVNLDLLEACHLSSAMLLEVPNMAAAGVDGENAPNNRRARVISRTFRKHHDIYDRQV 452          
BLAST of mRNA_H-canaliculatus_F_contig13850.3057.1 vs. uniprot
Match: A0A6U3ZAQ9_9STRA (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZAQ9_9STRA)

HSP 1 Score: 361 bits (927), Expect = 3.950e-113
Identity = 198/334 (59.28%), Postives = 239/334 (71.56%), Query Frame = 1
Query:   28 EKTGVLKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQAYYERQGEMGIAADLALLQAEHLYYQHESIARAVHKAQSFTNKFGKTEDLHPACTVASASAPSDGALDVTKGHPAAFLGQPAVEH----EYADYTAQLKRLCVTVYQHGDDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQA-DISTQILYNRMMVTLGLCAFRKGLINEAHDCLRDVCSSRVKELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQES-----TELRRRVMSKHFRRYVDIFNRQV 999
            E+   ++V GSL+L++ RL +EY KSLQ I+PHT EY+ RL+DE+ +V+L  K QAYYER G    AA+LA L+ EHLYY+H+SIA  V +A  F  +FG+   LHPAC    +   + G++D +K HPAA  G+P+VE     E  D    +  LC  VYQHG DR RTRAMLCHI HHALHDRF  ARDLLLMSHLQD IS A D+ST IL+NRMMVTLGL AFR G I +AH CL DVCS RV+ELLAQGV   RF DK+ EQEKAE+RRQ PYH HINLDLLE CHLTSAMLLEVPNMA  +     +  R RV+S+ FR+  DI++RQV
Sbjct:  501 EELHTIRVPGSLALFLTRLDEEYNKSLQKISPHTIEYVARLRDEARLVDLQMKFQAYYERIGSTAEAAELAQLRVEHLYYRHDSIATQVDRASKFYERFGEASMLHPACV---SDNDTRGSVDYSKVHPAASCGKPSVEDTDAAESVDSAKLIADLCTYVYQHGSDRSRTRAMLCHIYHHALHDRFLDARDLLLMSHLQDTISSAGDVSTMILFNRMMVTLGLAAFRLGRIWDAHQCLSDVCSGRVRELLAQGVSTGRFSDKSAEQEKAEKRRQIPYHQHINLDLLEACHLTSAMLLEVPNMAASAEGDAGSSRRTRVISRTFRKNHDIYDRQV 831          
BLAST of mRNA_H-canaliculatus_F_contig13850.3057.1 vs. uniprot
Match: A0A7S4IUV2_9STRA (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IUV2_9STRA)

HSP 1 Score: 358 bits (919), Expect = 2.820e-111
Identity = 200/336 (59.52%), Postives = 241/336 (71.73%), Query Frame = 1
Query:   28 EKTGVLKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIRRLKDESVVVELAGKVQAYYERQGEMGIAADLALLQAEHLYYQHESIARAVHKAQSFTNKFGKTEDLHPACTVASASAPSDGALDVTKGHPAAFLGQPAV--EHEYADYTAQL-KRLCVTVYQHGDDRCRTRAMLCHITHHALHDRFYPARDLLLMSHLQDNISQA-DISTQILYNRMMVTLGLCAFRKGLINEAHDCLRDVCSSRVKELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAMLLEVPNMAQESTE--------LRRRVMSKHFRRYVDIFNRQV 999
            E+   + V+GSLSL++ RL +EY KSLQ I+PHT EY+ RL+DE+ +VEL GK QAYY R G    AA+LA L+ EHLYY+H++IA  V +A  F   +G+ E LHPAC   SA A    + D +K HPAA LG+P+V  E E    +AQL   LC  VY++G DR +TR+MLCHI HHALHDRF  ARDLLLMSHLQD IS A D+ST +L+NRMMVT+GL AFR G I +AH CL DVCS RV+ELLAQGV   RF DK  EQEKAERRRQTPYHMHIN+DLLE CHLTSAMLLEVPNMAQ             R RV+S+ FR++ DI++R V
Sbjct:  577 EELRTIIVIGSLSLHLTRLDEEYIKSLQRISPHTSEYVTRLRDEARLVELLGKAQAYYTRIGSKPEAAELAQLRVEHLYYRHDTIADQVDRAALFHETYGEAELLHPACI--SADADEGKSNDYSKSHPAAALGRPSVATESEAPVDSAQLITDLCTYVYKYGSDRSKTRSMLCHIFHHALHDRFLEARDLLLMSHLQDTISNAGDVSTMLLFNRMMVTMGLAAFRLGRIWDAHQCLGDVCSGRVRELLAQGVSSGRFSDKTDEQEKAERRRQTPYHMHINMDLLEACHLTSAMLLEVPNMAQAGAAGGDDTGGPRRARVISRQFRKHHDIYDRSV 910          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13850.3057.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM18_ECTSI3.960e-21694.29Eukaryotic translation initiation factor 3 subunit... [more]
A0A835YUE3_9STRA7.670e-13866.16Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2BS49_9STRA4.810e-12861.85Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S4E4E4_9STRA7.370e-12359.36Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2HV13_9STRA7.760e-12060.31Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2UU87_9STRA5.460e-11759.69Eukaryotic translation initiation factor 3 subunit... [more]
F0Y6I4_AURAN9.960e-11659.19PCI domain-containing protein (Fragment) n=1 Tax=A... [more]
A0A7R9W1A8_9STRA2.130e-11459.94Hypothetical protein (Fragment) n=2 Tax=Pseudictyo... [more]
A0A6U3ZAQ9_9STRA3.950e-11359.28Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S4IUV2_9STRA2.820e-11159.52Eukaryotic translation initiation factor 3 subunit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13850contigH-canaliculatus_F_contig13850:173..2795 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score630.9
Seed ortholog evalue3.3e-178
Seed eggNOG ortholog2880.D8LM18
Preferred nameEIF3C
KEGG koko:K03252,ko:K08597
KEGG Pathwayko03013,map03013
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003743,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005852,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0031369,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
EggNOG OGsKOG1076@1,KOG1076@2759
EC3.4.22.68
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko03012,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionEIF3C (EUKARYOTIC TRANSLATION INITIATION FACTOR 3 subunit c)
Ec32 orthologEc-14_002510.1
Exons4
Model size999
Cds size999
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13850.3057.1prot_H-canaliculatus_F_contig13850.3057.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig13850 173..2795 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929126.6866505-CDS-H-canaliculatus_F_contig13850:172..4211622929126.6866505-CDS-H-canaliculatus_F_contig13850:172..421Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13850 173..421 +
1696845688.4500337-CDS-H-canaliculatus_F_contig13850:172..4211696845688.4500337-CDS-H-canaliculatus_F_contig13850:172..421Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13850 173..421 +
1622929126.7081957-CDS-H-canaliculatus_F_contig13850:1187..13911622929126.7081957-CDS-H-canaliculatus_F_contig13850:1187..1391Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13850 1188..1391 +
1696845688.462215-CDS-H-canaliculatus_F_contig13850:1187..13911696845688.462215-CDS-H-canaliculatus_F_contig13850:1187..1391Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13850 1188..1391 +
1622929126.7236755-CDS-H-canaliculatus_F_contig13850:1628..19671622929126.7236755-CDS-H-canaliculatus_F_contig13850:1628..1967Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13850 1629..1967 +
1696845688.4733255-CDS-H-canaliculatus_F_contig13850:1628..19671696845688.4733255-CDS-H-canaliculatus_F_contig13850:1628..1967Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13850 1629..1967 +
1622929126.7432601-CDS-H-canaliculatus_F_contig13850:2588..27951622929126.7432601-CDS-H-canaliculatus_F_contig13850:2588..2795Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13850 2589..2795 +
1696845688.4831169-CDS-H-canaliculatus_F_contig13850:2588..27951696845688.4831169-CDS-H-canaliculatus_F_contig13850:2588..2795Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig13850 2589..2795 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig13850.3057.1

>prot_H-canaliculatus_F_contig13850.3057.1 ID=prot_H-canaliculatus_F_contig13850.3057.1|Name=mRNA_H-canaliculatus_F_contig13850.3057.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=333bp
QVADVVAEVEKTGVLKVVGSLSLYMIRLGDEYTKSLQSINPHTQEYIRRL
KDESVVVELAGKVQAYYERQGEMGIAADLALLQAEHLYYQHESIARAVHK
AQSFTNKFGKTEDLHPACTVASASAPSDGALDVTKGHPAAFLGQPAVEHE
YADYTAQLKRLCVTVYQHGDDRCRTRAMLCHITHHALHDRFYPARDLLLM
SHLQDNISQADISTQILYNRMMVTLGLCAFRKGLINEAHDCLRDVCSSRV
KELLAQGVQMNRFQDKNPEQEKAERRRQTPYHMHINLDLLECCHLTSAML
LEVPNMAQESTELRRRVMSKHFRRYVDIFNRQV
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mRNA from alignment at H-canaliculatus_F_contig13850:173..2795+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig13850.3057.1 ID=mRNA_H-canaliculatus_F_contig13850.3057.1|Name=mRNA_H-canaliculatus_F_contig13850.3057.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2623bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13850:173..2795+ (Hapterophycus canaliculatus Oshoro5f female)
CAGGTGGCCGACGTCGTGGCCGAGGTTGAGAAAACCGGCGTCCTCAAGGT GGTCGGCTCGCTGTCGCTGTACATGATCCGCCTCGGGGACGAGTACACCA AGTCTCTCCAGAGCATCAACCCGCACACGCAGGAGTACATCCGGCGGCTG AAGGACGAGTCGGTGGTGGTGGAGCTTGCCGGCAAGGTGCAGGCGTACTA CGAGCGCCAGGGAGAGATGGGGATCGCGGCGGACCTCGCCCTCCTGCAGG TGGGTGGTCATCGACGACGGTGCCTGCCAAGTTATGGTTTAGGGGGGAAG GGGGAGTGGGGAGTGCCGGCTTGTTGGTGGGTTTGTGTCTCATGGTGGTC GACGCGCGCTCGTTTGCTTGCTCGCATTAAGGAGACATGCCGCCACAGAG TGAAAGTCCGTTAGCGGAGTGGGGGAGCATCGGCGGTGGCGGTAGTGCTG GTGGTATCAGTGACGGCTTGCGCGAGCGCCTGCAGTCGCAGCGGCAGTCT CGTCACGCCACGCAGACCCAACCGCCGCAGCCGAAGTAGCATGTCGAGGG CGAGGACAGTGCTCTCCGCAAAATGGAGCTTTCGCGCTTGAGTCAGGATC CGTTCGTGTGTGTGGCGTGTGTGTGTGTGTGTGTTGGTTGGGAGCAGTGG CGGTGGTGAATTCCCTGAACGATGAGAGATCGGGAGTGTTTGTCCGCGGC ACCACATCGTCTTGTTTTCTCCGTGTTGAATGTGTCCGTCTGAGTGTGTG GGTGTGTGTCGAGGTGCAAAAAAAAGAACAGCAACGAAGGCGTGGCGGAG CCCCTTCACCGAAATATTTTGTTTCATACAGCAACGGTCTTTCGTGCAGG GACGCCGTGATACGAACATGCGGACCCCAGACCGCCCGCAGGATTTTTGC TCTCCTCGTGCCCCACTCACACCTCTCCTCCCATGACCCCCCGCCCCCGT CCCCGTCCCCGCTGATGCCGCTCGTCCCGTCCAACCCGCCGCCGTGCGCC CCTGCACGCTCAAAGGCCGAGCACCTCTACTACCAGCACGAGTCGATCGC TCGCGCGGTCCACAAGGCGCAGTCGTTCACCAACAAGTTCGGTAAGACAG AGGACCTCCACCCTGCGTGCACCGTCGCGTCGGCCTCGGCACCGTCGGAC GGAGCCCTGGACGTCACCAAGGGACACCCCGCCGCGTTCCTCGGGCAGCC GGCCGTGGAACATGAATACGTGAGTATATTCTCTATTTGCACGTGTATGT ATGTATGTGTGTGTATCCTCCGCGGACCCCCCTGTCCCGTCCTTTCGGTT GGCCGCCCTCTCACGACTACAGTCCCCTCGACCTTCTCCGTGTCTGTTGC CGACGCCGCTCCTGAGCATGCTGCTGCGGTGTGTATCCTCCGCGGACCCC ACTCTGCCTGAACATGCTGCTGCTGCTGCCGCTGCTGCTGCGTTTGGCAC GAACAGGCCGACTACACGGCGCAGCTGAAGCGCCTGTGCGTGACCGTGTA CCAGCACGGGGACGACCGCTGCCGCACGCGCGCCATGCTGTGCCACATCA CGCACCACGCTCTCCACGACCGGTTCTACCCGGCCCGCGACCTGCTCCTC ATGAGCCACCTCCAGGACAACATCAGCCAGGCGGACATCTCGACGCAGAT CCTGTACAACCGCATGATGGTGACGCTGGGGCTGTGCGCCTTCCGGAAGG GGCTGATCAACGAGGCCCACGACTGCCTCCGAGACGTGTGCTCGTCGCGG GTGAAGGAGCTGCTCGCGCAGGGCGTGCAGATGAACCGCTTCCAGGTACA GCGTGCCTCGCCTTGCGGGTGGGTTAGTGGGCGTGGGCGTGGGCGTGGGC GAGTGCGGCCGCCAGGTGTCAGCGCCGGAAGGTGCCGTGTTTTTTGTCGT TGTGATGGCCCGAAGTATTGAGTCTCGACGATTGTTGTTGTCGTTGTTTT CGTGAGTCTGTTGTTGAGCGTGTTGAACTGTGTCAATCGTTGTTGTTGTT GTTGTTGTTGTTGTTGTTGTTGTTGTCGTTGTTGCCGTCGTCAGTCTGCT ATTTGGCGTGTTGAACGATGGCGGTCCGTTTAGCCGCTAACGCTGCACGG CACGGCGTTCTTCCTGATCGGGTGGCTAGGGCTGACCACGATTTTTGAGC TGGTGAATGCTGAAGCGTGTGCATCGCATTCCGTGTCCCTCCCCCCCCTC CAACTCCCGAACGTGTGACTGCCCCGTGCCGTTGGACCGGTTGTTGGTTT GTCTCTCTGGCTCCGGCAAAACCATCGGTTCGAGGTCGTGACGTGCCACT CTCCCCTTAACCCCGTCCCTCCTTTCCTCCCATGCGCTCGTTTGCTTTCG TTTGTTCGGCCTTGACTTGACACCTCACACAAAAACAAAATCCAACAAAA TTATCGTGGCGACCAGGACAAGAACCCGGAGCAAGAGAAGGCAGAGCGCC GAAGGCAGACCCCGTATCACATGCACATCAACCTCGACTTGCTGGAGTGC TGCCACCTGACGAGCGCAATGCTCCTGGAGGTGCCCAACATGGCTCAAGA GTCGACGGAGCTGCGCCGGCGGGTGATGTCGAAGCACTTCCGCCGCTACG TTGACATCTTCAACCGTCAGGTG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13850:173..2795+

>mRNA_H-canaliculatus_F_contig13850.3057.1 ID=mRNA_H-canaliculatus_F_contig13850.3057.1|Name=mRNA_H-canaliculatus_F_contig13850.3057.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1998bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13850:173..2795+ (Hapterophycus canaliculatus Oshoro5f female)
CAGGTGGCCGACGTCGTGGCCGAGGTTGAGAAAACCGGCGTCCTCAAGGT
GGTCGGCTCGCTGTCGCTGTACATGATCCGCCTCGGGGACGAGTACACCA
AGTCTCTCCAGAGCATCAACCCGCACACGCAGGAGTACATCCGGCGGCTG
AAGGACGAGTCGGTGGTGGTGGAGCTTGCCGGCAAGGTGCAGGCGTACTA
CGAGCGCCAGGGAGAGATGGGGATCGCGGCGGACCTCGCCCTCCTGCAGC
AGGTGGCCGACGTCGTGGCCGAGGTTGAGAAAACCGGCGTCCTCAAGGTG
GTCGGCTCGCTGTCGCTGTACATGATCCGCCTCGGGGACGAGTACACCAA
GTCTCTCCAGAGCATCAACCCGCACACGCAGGAGTACATCCGGCGGCTGA
AGGACGAGTCGGTGGTGGTGGAGCTTGCCGGCAAGGTGCAGGCGTACTAC
GAGCGCCAGGGAGAGATGGGGATCGCGGCGGACCTCGCCCTCCTGCAGGC
CGAGCACCTCTACTACCAGCACGAGTCGATCGCTCGCGCGGTCCACAAGG
CGCAGTCGTTCACCAACAAGTTCGGTAAGACAGAGGACCTCCACCCTGCG
TGCACCGTCGCGTCGGCCTCGGCACCGTCGGACGGAGCCCTGGACGTCAC
CAAGGGACACCCCGCCGCGTTCCTCGGGCAGCCGGCCGTGGAACATGAAT
ACGCCGAGCACCTCTACTACCAGCACGAGTCGATCGCTCGCGCGGTCCAC
AAGGCGCAGTCGTTCACCAACAAGTTCGGTAAGACAGAGGACCTCCACCC
TGCGTGCACCGTCGCGTCGGCCTCGGCACCGTCGGACGGAGCCCTGGACG
TCACCAAGGGACACCCCGCCGCGTTCCTCGGGCAGCCGGCCGTGGAACAT
GAATACGCCGACTACACGGCGCAGCTGAAGCGCCTGTGCGTGACCGTGTA
CCAGCACGGGGACGACCGCTGCCGCACGCGCGCCATGCTGTGCCACATCA
CGCACCACGCTCTCCACGACCGGTTCTACCCGGCCCGCGACCTGCTCCTC
ATGAGCCACCTCCAGGACAACATCAGCCAGGCGGACATCTCGACGCAGAT
CCTGTACAACCGCATGATGGTGACGCTGGGGCTGTGCGCCTTCCGGAAGG
GGCTGATCAACGAGGCCCACGACTGCCTCCGAGACGTGTGCTCGTCGCGG
GTGAAGGAGCTGCTCGCGCAGGGCGTGCAGATGAACCGCTTCCAGGCCGA
CTACACGGCGCAGCTGAAGCGCCTGTGCGTGACCGTGTACCAGCACGGGG
ACGACCGCTGCCGCACGCGCGCCATGCTGTGCCACATCACGCACCACGCT
CTCCACGACCGGTTCTACCCGGCCCGCGACCTGCTCCTCATGAGCCACCT
CCAGGACAACATCAGCCAGGCGGACATCTCGACGCAGATCCTGTACAACC
GCATGATGGTGACGCTGGGGCTGTGCGCCTTCCGGAAGGGGCTGATCAAC
GAGGCCCACGACTGCCTCCGAGACGTGTGCTCGTCGCGGGTGAAGGAGCT
GCTCGCGCAGGGCGTGCAGATGAACCGCTTCCAGGACAAGAACCCGGAGC
AAGAGAAGGCAGAGCGCCGAAGGCAGACCCCGTATCACATGCACATCAAC
CTCGACTTGCTGGAGTGCTGCCACCTGACGAGCGCAATGCTCCTGGAGGT
GCCCAACATGGCTCAAGAGTCGACGGAGCTGCGCCGGCGGGTGATGTCGA
AGCACTTCCGCCGCTACGTTGACATCTTCAACCGTCAGGTGGACAAGAAC
CCGGAGCAAGAGAAGGCAGAGCGCCGAAGGCAGACCCCGTATCACATGCA
CATCAACCTCGACTTGCTGGAGTGCTGCCACCTGACGAGCGCAATGCTCC
TGGAGGTGCCCAACATGGCTCAAGAGTCGACGGAGCTGCGCCGGCGGGTG
ATGTCGAAGCACTTCCGCCGCTACGTTGACATCTTCAACCGTCAGGTG
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