mRNA_H-canaliculatus_F_contig13845.3051.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig13845.3051.1 vs. uniprot
Match: D7FVH2_ECTSI (Myosin I, high molecular weight-Acanthamoeba sp n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVH2_ECTSI) HSP 1 Score: 325 bits (832), Expect = 8.210e-100 Identity = 169/187 (90.37%), Postives = 179/187 (95.72%), Query Frame = 1
Query: 1 RKGAMATRFTIAKQFKGQLDALMSTLNATDPHFIRCMKPNSEKAGDMFVTPMMLEQLRYSGLLEVCTIRKMGFPIRRVFDEFVQRYGCISPSAPSIDALLADLVKKVGLDWCGILNDVKFAKGHSKVLMKNEQASALDVAREKVLEKYAVMLQRLARGFIVRRRLLFMRKVLQGLHDAIAKRSDTLL 561
RKGAMATRFTIAKQFKGQLDALMSTLNATDPHFIRCMKPNSEKAGD+FVTPMMLEQLRYSGLLEVCTIRKMGFPIRRVFDEF+QRYGCISPSA +ID+LL+DLV+K IL+++KFAKGHSKVLMKNEQASALDVAREKVLEKYA+MLQRLARGFIVRRRLLFMRKVLQGLHDAIAKRSDTLL
Sbjct: 592 RKGAMATRFTIAKQFKGQLDALMSTLNATDPHFIRCMKPNSEKAGDLFVTPMMLEQLRYSGLLEVCTIRKMGFPIRRVFDEFMQRYGCISPSATNIDSLLSDLVQK------RILDEMKFAKGHSKVLMKNEQASALDVAREKVLEKYALMLQRLARGFIVRRRLLFMRKVLQGLHDAIAKRSDTLL 772
BLAST of mRNA_H-canaliculatus_F_contig13845.3051.1 vs. uniprot
Match: A0A6H5JBI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBI4_9PHAE) HSP 1 Score: 321 bits (823), Expect = 1.780e-98 Identity = 167/187 (89.30%), Postives = 177/187 (94.65%), Query Frame = 1
Query: 1 RKGAMATRFTIAKQFKGQLDALMSTLNATDPHFIRCMKPNSEKAGDMFVTPMMLEQLRYSGLLEVCTIRKMGFPIRRVFDEFVQRYGCISPSAPSIDALLADLVKKVGLDWCGILNDVKFAKGHSKVLMKNEQASALDVAREKVLEKYAVMLQRLARGFIVRRRLLFMRKVLQGLHDAIAKRSDTLL 561
RKGAMATRFTIAKQFKGQLDALMSTLNATDPHFIRCMKPNS+KAGD+FVTPMMLEQLRYSGLLEVCTIRKMGFPIRR+FDEF+QRYGCISPSA +ID+LL DLV+K IL+ +KFAKGHSKVLMKNEQASALDVAREKVLEKYA+MLQRLARGFIVRRRLLFMRKVLQGLHDAIAKRSDTLL
Sbjct: 524 RKGAMATRFTIAKQFKGQLDALMSTLNATDPHFIRCMKPNSDKAGDLFVTPMMLEQLRYSGLLEVCTIRKMGFPIRRMFDEFMQRYGCISPSATNIDSLLTDLVQK------RILDQMKFAKGHSKVLMKNEQASALDVAREKVLEKYALMLQRLARGFIVRRRLLFMRKVLQGLHDAIAKRSDTLL 704
BLAST of mRNA_H-canaliculatus_F_contig13845.3051.1 vs. uniprot
Match: A0A835YPP0_9STRA (Myosin I, high molecular weight-Acanthamoeba sp n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPP0_9STRA) HSP 1 Score: 199 bits (507), Expect = 7.720e-56 Identity = 102/187 (54.55%), Postives = 133/187 (71.12%), Query Frame = 1
Query: 1 RKGAMATRFTIAKQFKGQLDALMSTLNATDPHFIRCMKPNSEKAGDMFVTPMMLEQLRYSGLLEVCTIRKMGFPIRRVFDEFVQRYGCISPSAPSIDALLADLVKKVGLDWCGILNDVKFAKGHSKVLMKNEQASALDVAREKVLEKYAVMLQRLARGFIVRRRLLFMRKVLQGLHDAIAKRSDTLL 561
RKG MAT T+ KQF+ QLDALM TLNATDPH+IRCMKPN+EK G MF + MML+QLRYSGLLEVC IRKMG+PIRR +DEF RY I PS + +ALLA L G ++D + KG++K+LMK QA+ LDVARE L+++ + +Q +ARGF+ RRRL + ++++ L A+ R + L
Sbjct: 640 RKGKMATGNTLGKQFRAQLDALMVTLNATDPHYIRCMKPNNEKRGSMFKSQMMLQQLRYSGLLEVCRIRKMGYPIRRTYDEFFARYQVIHPSCATTEALLAKLTA------AGTVDDTRLLKGNTKILMKQVQANDLDVAREVALQRHVIRIQGVARGFLTRRRLFYFKRIMAELRAAMKARDENKL 820
BLAST of mRNA_H-canaliculatus_F_contig13845.3051.1 vs. uniprot
Match: A0A835YVK9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVK9_9STRA) HSP 1 Score: 175 bits (444), Expect = 6.780e-48 Identity = 90/172 (52.33%), Postives = 119/172 (69.19%), Query Frame = 1
Query: 37 KQFKGQLDALMSTLNATDPHFIRCMKPNSEKAGDMFVTPMMLEQLRYSGLLEVCTIRKMGFPIRRVFDEFVQRYGCISPSAPSIDALLADLVKKVGLDWCGILNDVKFAKGHSKVLMKNEQASALDVAREKVLEKYAVMLQRLARGFIVRRRLLFMRKVLQGLHDAIAKRSD 552
+QFK QLDALM TL+ATDPH+IRCMKPN+EK G F + MML+QLRYSGLLEVC IRKMG+PIRR + EF RY I PS +I+ALL+ L +D + +G +KVLMK QA+ LDVARE L+++ + +Q + RGF+ RRRL + ++++ L AI R +
Sbjct: 442 QQFKAQLDALMVTLSATDPHYIRCMKPNNEKRGGYFKSTMMLQQLRYSGLLEVCRIRKMGYPIRRTYGEFYARYSVIDPSCKTIEALLSKLKMDRIVDDARCVTAPPLLRGKTKVLMKQAQANDLDVARESSLQRHVIRIQGVVRGFLTRRRLSYFKRIMAELRAAIKARDE 613
BLAST of mRNA_H-canaliculatus_F_contig13845.3051.1 vs. uniprot
Match: A0A482RXN2_9ARCH (Myosin motor domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RXN2_9ARCH) HSP 1 Score: 167 bits (422), Expect = 4.730e-45 Identity = 85/182 (46.70%), Postives = 126/182 (69.23%), Query Frame = 1
Query: 7 GAMATRFTIAKQFKGQLDALMSTLNATDPHFIRCMKPNSEKAGDMFVTPMMLEQLRYSGLLEVCTIRKMGFPIRRVFDEFVQRYGCISPSAPSIDALLADLVKKVGLDWCGILNDVKFAKGHSKVLMKNEQASALDVAREKVLEKYAVMLQRLARGFIVRRRLLFMRKVLQGLHDAIAKRSD 552
GA A++ T+ QFK QL+ L++TLN+T PHF+RCMK N +KAG++F + M +QLRY+GL+EVC IRK+G+P+RR F EF +RY CI P +DALLA L KK GIL + ++AKGHS+V M+ Q++ L++ARE+ L +++Q+ AR + +R + +K+L L AI +R +
Sbjct: 173 GAAASKKTLGFQFKTQLNELIATLNSTFPHFVRCMKSNDQKAGNVFTSSRMQDQLRYAGLVEVCRIRKLGYPVRRPFMEFYKRYRCIDLLCPDLDALLAVLSKK------GILKEGEWAKGHSRVFMRTHQSAELELAREQSLVTITILVQKHARRMVAFKRFKYFKKILTDLQAAILRRQE 348
BLAST of mRNA_H-canaliculatus_F_contig13845.3051.1 vs. uniprot
Match: A0A7S3HJN1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJN1_9STRA) HSP 1 Score: 155 bits (392), Expect = 6.220e-41 Identity = 81/182 (44.51%), Postives = 117/182 (64.29%), Query Frame = 1
Query: 7 GAMATRFTIAKQFKGQLDALMSTLNATDPHFIRCMKPNSEKAGDMFVTPMMLEQLRYSGLLEVCTIRKMGFPIRRVFDEFVQRYGCISPSAPSIDALLADLVKKVGLDWCGILNDVKFAKGHSKVLMKNEQASALDVAREKVLEKYAVMLQRLARGFIVRRRLLFMRKVLQGLHDAIAKRSD 552
G + + T+ QFK QL+ L++TLN+T PHF+RCMK N K G F + M +QLRY+GL+EVC IRK+GFP+RR FDEF +RY C++ +P++D LL L +K G+L ++AKGHSKV + EQ+ L+ ARE L K ++Q+ R I RR+ +K+L + +AI R +
Sbjct: 343 GKKSAKKTLGSQFKSQLNDLVATLNSTFPHFVRCMKSNDNKKGGQFTSSRMQDQLRYAGLVEVCRIRKLGFPVRRPFDEFFKRYRCVNLLSPNLDHLLQFLQEK------GVLIAGEWAKGHSKVFCRTEQSGNLEYARETSLTKVVTIVQKNTRRMIARRKFKTWKKILINVAEAIKNREE 518
BLAST of mRNA_H-canaliculatus_F_contig13845.3051.1 vs. uniprot
Match: A0A7R9YCN6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCN6_9STRA) HSP 1 Score: 156 bits (395), Expect = 7.150e-41 Identity = 87/178 (48.88%), Postives = 116/178 (65.17%), Query Frame = 1
Query: 1 RKGAMATRFTIAKQFKGQLDALMSTLNATDPHFIRCMKPNSEKAGDMFVTPMMLEQLRYSGLLEVCTIRKMGFPIRRVFDEFVQRYGCISPSAPSIDALLADLVKKVGLDWCGILNDVKFAKGHSKVLMKNEQASALDVAREKVLEKYAVMLQRLARGFIVRRRLLFMRKVLQGLHDA 534
R+G A + T+ QF+ L++LM TLN+T PHF+RCMKPN +K G+ F++ MML+QLRY+GLLEVC IRK+GFP+RR F+EF +RY + P+A + D +L L D L ++AKGHSK+ MKNEQA+ LD ARE+ A QR+ RGFI R + R L L A
Sbjct: 646 RQGKKAVK-TLGGQFRASLESLMKTLNSTFPHFVRCMKPNDQKIGNKFMSQMMLDQLRYAGLLEVCRIRKLGFPVRRGFEEFFKRYRPLYPAAKNFDDILFHLTH----DEDNKLKPGQWAKGHSKMFMKNEQAAELDQAREEAFIAVARKCQRIIRGFIWRTKYRIWRNTLTLLAQA 818
BLAST of mRNA_H-canaliculatus_F_contig13845.3051.1 vs. uniprot
Match: A0A7S2WKI9_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WKI9_9STRA) HSP 1 Score: 144 bits (363), Expect = 1.030e-38 Identity = 76/183 (41.53%), Postives = 112/183 (61.20%), Query Frame = 1
Query: 1 RKGAMATRFTIAKQFKGQLDALMSTLNATDPHFIRCMKPNSEKAGDMFVTPMMLEQLRYSGLLEVCTIRKMGFPIRRVFDEFVQRYGCISPSAPSIDALLADLVKKVGLDWCGILNDVKFAKGHSKVLMKNEQASALDVAREKVLEKYAVMLQRLARGFIVRRRLLFMRKVLQGLHDAIAKRS 549
++G A + TI QFK QL LM TLN T+PH+IRC+KPNS K +MF+ M LEQLRY+GLLEVC IR+ G+P+R+ F EFV RY + LA+ ++ G IL ++ G++KV ++ Q L+ AR+ + +++QR+ARGF+ R+R ++ L+ L AI R+
Sbjct: 152 KRGGAANKKTIGAQFKEQLGTLMKTLNTTEPHYIRCVKPNSAKKNNMFMAKMCLEQLRYAGLLEVCRIRQTGYPVRKTFSEFVHRYSPLGSGGHKKPESLANALQDKG-----ILKKGEWQIGNTKVFLRTSQFEELEAARDASVSVSVIVIQRIARGFVQRKRYRSVKSFLKSLEKAIKSRN 329
BLAST of mRNA_H-canaliculatus_F_contig13845.3051.1 vs. uniprot
Match: A0A2R5G113_9STRA (Myosin-6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G113_9STRA) HSP 1 Score: 140 bits (352), Expect = 5.210e-35 Identity = 79/176 (44.89%), Postives = 111/176 (63.07%), Query Frame = 1
Query: 40 QFKGQLDALMSTLNATDPHFIRCMKPNSEKAGDMFVTPMMLEQLRYSGLLEVCTIRKMGFPIRRVFDEFVQRYGCISPSAPSIDA--LLADLVKKVGLDWCGILNDVKFAKGHSKVLMKNEQASALDVAREKVLEKYAVMLQRLARGFIVRRRLLFMRKVLQGLHDAIAKRSDTLL 561
+FK QL LM LN+T+PHFIRC+KPN EK G +F +P++L+QLRY+GLLEVC IRK+G+PIR+ F EF +RY ++ + + DA L + L +K G+L ++ G SKV M+N + L+ ARE L + AV+LQ +AR FI R + + L L I KR +L
Sbjct: 632 KFKAQLSELMKVLNSTEPHFIRCVKPNEEKVGSLFTSPLVLDQLRYAGLLEVCRIRKIGYPIRKPFKEFFRRYSPLAHGSRAKDAKGLASQLCEK------GLLVKGEYQIGKSKVFMRNAPYNDLEAAREIALRQQAVLLQSIARRFIARCQFVKYMATLDQLRAGIKKRDYDML 801
BLAST of mRNA_H-canaliculatus_F_contig13845.3051.1 vs. uniprot
Match: A0A7S2FEI0_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FEI0_9STRA) HSP 1 Score: 139 bits (349), Expect = 1.320e-34 Identity = 75/175 (42.86%), Postives = 106/175 (60.57%), Query Frame = 1
Query: 28 TIAKQFKGQLDALMSTLNATDPHFIRCMKPNSEKAGDMFVTPMMLEQLRYSGLLEVCTIRKMGFPIRRVFDEFVQRYGCISPSAPSIDALLADLVKKVGLDWCGILNDVKFAKGHSKVLMKNEQASALDVAREKVLEKYAVMLQRLARGFIVRRRLLFMRKVLQGLHDAIAKRSD 552
T+ QFK L+ LM TLNA +PHF+RCMKPN K G + MML QLRYSGLLEVC IRK+G+P+RR DEF +RY + +A + AL+A L + G+ ++A G +KV M+N QA+ L+ AR+ + +Q L RG + + + M K + L+ A+ RS+
Sbjct: 409 TLGAQFKTSLNTLMVTLNAAEPHFVRCMKPNKAKVGGVLEADMMLGQLRYSGLLEVCRIRKLGYPVRRDNDEFFKRYKVVVGTAADLPALIAALAAE------GVFKPEQYAMGKTKVFMRNLQATQLEAARDVAVAASIYKIQSLVRGAVYKFKFRRMMKAIADLNAALEARSE 577 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13845.3051.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig13845.3051.1 >prot_H-canaliculatus_F_contig13845.3051.1 ID=prot_H-canaliculatus_F_contig13845.3051.1|Name=mRNA_H-canaliculatus_F_contig13845.3051.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=183bp MATRFTIAKQFKGQLDALMSTLNATDPHFIRCMKPNSEKAGDMFVTPMMLback to top mRNA from alignment at H-canaliculatus_F_contig13845:254..1473- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig13845.3051.1 ID=mRNA_H-canaliculatus_F_contig13845.3051.1|Name=mRNA_H-canaliculatus_F_contig13845.3051.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1220bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13845:254..1473- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig13845:254..1473- >mRNA_H-canaliculatus_F_contig13845.3051.1 ID=mRNA_H-canaliculatus_F_contig13845.3051.1|Name=mRNA_H-canaliculatus_F_contig13845.3051.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1098bp|location=Sequence derived from alignment at H-canaliculatus_F_contig13845:254..1473- (Hapterophycus canaliculatus Oshoro5f female)back to top |