mRNA_H-canaliculatus_F_contig1381.3030.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig1381.3030.1 vs. uniprot
Match: D7FWP4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWP4_ECTSI) HSP 1 Score: 204 bits (518), Expect = 2.660e-65 Identity = 99/105 (94.29%), Postives = 102/105 (97.14%), Query Frame = 1
Query: 16 QMVNVPKERRTYCKGKKCTKHTVHKVTQYKAGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGHQY 330
+MVNVPKERRTYCK K+C KHTVHKVTQYK+GKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECK CKAKKQLVIARCKHFELGEKKQATGHQY
Sbjct: 34 EMVNVPKERRTYCKDKRCNKHTVHKVTQYKSGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKLCKAKKQLVIARCKHFELGEKKQATGHQY 138
BLAST of mRNA_H-canaliculatus_F_contig1381.3030.1 vs. uniprot
Match: A0A835YP36_9STRA (Zinc-binding ribosomal protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP36_9STRA) HSP 1 Score: 193 bits (491), Expect = 1.160e-61 Identity = 94/104 (90.38%), Postives = 99/104 (95.19%), Query Frame = 1
Query: 19 MVNVPKERRTYCKGKKCTKHTVHKVTQYKAGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGHQY 330
MVNVPKERRTYCK KKC KHTVHKV+QYK+GKASNFAQGKRRYD KQ+G+GGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVI RCKHFELGEKK+ATGH Y
Sbjct: 1 MVNVPKERRTYCKSKKCGKHTVHKVSQYKSGKASNFAQGKRRYDSKQKGYGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIKRCKHFELGEKKKATGHVY 104
BLAST of mRNA_H-canaliculatus_F_contig1381.3030.1 vs. uniprot
Match: F0YGF9_AURAN (RL44_PICJA 60S ribosomal protein L44 n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YGF9_AURAN) HSP 1 Score: 190 bits (483), Expect = 1.920e-60 Identity = 92/104 (88.46%), Postives = 95/104 (91.35%), Query Frame = 1
Query: 19 MVNVPKERRTYCKGKKCTKHTVHKVTQYKAGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGHQY 330
MVNVPKER+TYCK KKC KHT HKVTQYKAGKASNFAQGKRRYD KQ GFGGQTKP+FHKKAKTTKKVTLRLECKECKAKKQL I RCKHFELGEKK+ TGH Y
Sbjct: 1 MVNVPKERKTYCKAKKCRKHTTHKVTQYKAGKASNFAQGKRRYDMKQMGFGGQTKPVFHKKAKTTKKVTLRLECKECKAKKQLTIKRCKHFELGEKKKTTGHTY 104
BLAST of mRNA_H-canaliculatus_F_contig1381.3030.1 vs. uniprot
Match: A0A7S2UXA0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXA0_9STRA) HSP 1 Score: 188 bits (477), Expect = 1.570e-59 Identity = 90/104 (86.54%), Postives = 96/104 (92.31%), Query Frame = 1
Query: 19 MVNVPKERRTYCKGKKCTKHTVHKVTQYKAGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGHQY 330
MVNVPKERRTYCK K C KHT+HKVTQYKAGKASNFAQGKRRYDHKQ+G+GGQTKPIFHKKAKTTKK+ LRLECKECK KKQLVI R KHFELGEKK++TG QY
Sbjct: 1 MVNVPKERRTYCKAKNCNKHTIHKVTQYKAGKASNFAQGKRRYDHKQKGYGGQTKPIFHKKAKTTKKIVLRLECKECKTKKQLVIKRTKHFELGEKKKSTGPQY 104
BLAST of mRNA_H-canaliculatus_F_contig1381.3030.1 vs. uniprot
Match: W7TXG3_9STRA (60s ribosomal protein l44 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXG3_9STRA) HSP 1 Score: 186 bits (472), Expect = 9.090e-59 Identity = 90/104 (86.54%), Postives = 97/104 (93.27%), Query Frame = 1
Query: 19 MVNVPKERRTYCKGKKCTKHTVHKVTQYKAGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGHQY 330
MV +PKER+T+CKGKKC KHTVHKVTQYKAGKASN+AQGKRRYD KQ+G+GGQTKPI HKKAKTTKKVTLRLECKECK KKQLVI R KHFELGEKK+ATGHQY
Sbjct: 1 MVCIPKERKTFCKGKKCKKHTVHKVTQYKAGKASNYAQGKRRYDRKQQGYGGQTKPILHKKAKTTKKVTLRLECKECKTKKQLVIKRTKHFELGEKKKATGHQY 104
BLAST of mRNA_H-canaliculatus_F_contig1381.3030.1 vs. uniprot
Match: A0A7S3NIT2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIT2_9STRA) HSP 1 Score: 186 bits (471), Expect = 1.250e-58 Identity = 91/100 (91.00%), Postives = 95/100 (95.00%), Query Frame = 1
Query: 19 MVNVPKERRTYCKGKKCTKHTVHKVTQYKAGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQAT 318
MVNVPKERRTYCKGKKC KHTVHKVTQYKAGKASNFAQGKRRYD KQ+G+GGQTKPIFHKKAKTTKKV LRLECKECKAKKQL I RCKHFELGEKK++T
Sbjct: 1 MVNVPKERRTYCKGKKCKKHTVHKVTQYKAGKASNFAQGKRRYDAKQQGYGGQTKPIFHKKAKTTKKVVLRLECKECKAKKQLCIKRCKHFELGEKKKST 100
BLAST of mRNA_H-canaliculatus_F_contig1381.3030.1 vs. uniprot
Match: A0A485LSL1_9STRA (Aste57867_25253 protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LSL1_9STRA) HSP 1 Score: 184 bits (466), Expect = 7.460e-58 Identity = 87/104 (83.65%), Postives = 97/104 (93.27%), Query Frame = 1
Query: 19 MVNVPKERRTYCKGKKCTKHTVHKVTQYKAGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGHQY 330
MVN+PKERRT+CKGKKC KHTVHKVTQYKAGKAS FAQG RRY+ KQ+GFGGQTKP+FHKKAKTTKK+TLR+ECKECKAKKQL I R KHFELGEKK+++GHQY
Sbjct: 1 MVNIPKERRTFCKGKKCRKHTVHKVTQYKAGKASKFAQGARRYNEKQQGFGGQTKPVFHKKAKTTKKITLRMECKECKAKKQLPIKRTKHFELGEKKKSSGHQY 104
BLAST of mRNA_H-canaliculatus_F_contig1381.3030.1 vs. uniprot
Match: A0A7S3LII2_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LII2_9STRA) HSP 1 Score: 184 bits (466), Expect = 7.460e-58 Identity = 87/104 (83.65%), Postives = 95/104 (91.35%), Query Frame = 1
Query: 19 MVNVPKERRTYCKGKKCTKHTVHKVTQYKAGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGHQY 330
MVNVPKERRT+CKGKKC KHT+HKVTQYKAGKASNFAQGKRRYD KQ+G+GGQTKP+FHKKAKTTKKV +RLECK+CK K QL + RCKHFELGEKK TGHQY
Sbjct: 1 MVNVPKERRTFCKGKKCLKHTMHKVTQYKAGKASNFAQGKRRYDRKQQGYGGQTKPVFHKKAKTTKKVVIRLECKDCKTKFQLRLKRCKHFELGEKKAPTGHQY 104
BLAST of mRNA_H-canaliculatus_F_contig1381.3030.1 vs. uniprot
Match: I6ZGD0_9STRA (Ribosomal protein L44 n=1 Tax=Aurantiochytrium sp. KRS101 TaxID=797128 RepID=I6ZGD0_9STRA) HSP 1 Score: 183 bits (465), Expect = 1.060e-57 Identity = 88/104 (84.62%), Postives = 96/104 (92.31%), Query Frame = 1
Query: 19 MVNVPKERRTYCKGKKCTKHTVHKVTQYKAGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGHQY 330
MVNVPKERRT+CKGK+C KHTVHKVTQYKAGKASNFAQGKRRYD KQ+G+GGQTKPIFHKKAKTTKKVTLRLECKECK K Q+ + RCK FELG+KK+A GHQY
Sbjct: 1 MVNVPKERRTFCKGKQCRKHTVHKVTQYKAGKASNFAQGKRRYDRKQKGYGGQTKPIFHKKAKTTKKVTLRLECKECKTKCQIGLKRCKTFELGQKKEAAGHQY 104
BLAST of mRNA_H-canaliculatus_F_contig1381.3030.1 vs. uniprot
Match: A0A418ASI0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418ASI0_9STRA) HSP 1 Score: 184 bits (468), Expect = 1.370e-57 Identity = 87/105 (82.86%), Postives = 98/105 (93.33%), Query Frame = 1
Query: 16 QMVNVPKERRTYCKGKKCTKHTVHKVTQYKAGKASNFAQGKRRYDHKQRGFGGQTKPIFHKKAKTTKKVTLRLECKECKAKKQLVIARCKHFELGEKKQATGHQY 330
QMVN+PKERRT+CKGKKC KHTVHKVTQYKAGKAS +AQG RRY+ KQ+GFGGQTKP+FHKKAKTTKK+TLR+ECKECKAKKQL I R KHFELGEKK+++GHQY
Sbjct: 41 QMVNIPKERRTFCKGKKCRKHTVHKVTQYKAGKASKYAQGARRYNEKQQGFGGQTKPVFHKKAKTTKKITLRMECKECKAKKQLPIKRTKHFELGEKKKSSGHQY 145 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1381.3030.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1381.3030.1 >prot_H-canaliculatus_F_contig1381.3030.1 ID=prot_H-canaliculatus_F_contig1381.3030.1|Name=mRNA_H-canaliculatus_F_contig1381.3030.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=105bp MVNVPKERRTYCKGKKCTKHTVHKVTQYKAGKASNFAQGKRRYDHKQRGFback to top mRNA from alignment at H-canaliculatus_F_contig1381:8889..11466+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig1381.3030.1 ID=mRNA_H-canaliculatus_F_contig1381.3030.1|Name=mRNA_H-canaliculatus_F_contig1381.3030.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2578bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1381:8889..11466+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1381:8889..11466+ >mRNA_H-canaliculatus_F_contig1381.3030.1 ID=mRNA_H-canaliculatus_F_contig1381.3030.1|Name=mRNA_H-canaliculatus_F_contig1381.3030.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=630bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1381:8889..11466+ (Hapterophycus canaliculatus Oshoro5f female)back to top |